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Oryza sativa
cluster # 10218 cluster # 10218       Sequences # 7       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10218#0 length = 1793 sequences # 4  
consensus_10218#1 length = 1114 sequences # 1  
consensus_10218#2 length = 836 sequences # 2  

consensusID : consensus_10218#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1793
fasta sequence
                              [CAAACGGCGGCGGCGGCGACCTGGAGGCGGGCTTGCCTCCTTGTCGATCTCTACCTTCCCTCTTCCTCTGCTTGTCTAGAAGTTACTAGACCTTTCTAGCCCTTGTATTCCTCCATCTTCCACCCCAAAACCTTCCAATATTGTAACAGATTCACTAGCTCCTTGTGTTGGATTTGATACCACTACTTCTGAAATTGCATTGTTGAAGTGGGTCGCTAACAATTGTAAAAACGAAAAAACCCCTTGTCGTCTTCTCCATTGCGGCACTGAAACTCAGGCGGCGCCACCAGCCAGCGTACCACGACGTTGCTCTGCTAGGGTTTGCTCCACCCTCCTCCCACCTCGCGCCATCGGATTCCACCTTCCCAGGTCTCCCTCCCCTCCCGTCGCCATGCCGCACCTCGTCCGCGAGCGCCTCTTCTTCGGCGACATCAACGACGCCATCGCCGCGCTCACCACCACCACCGCGGAAGCCGGCGGCTTCACCCACCTCCTCTCCGTCGTCAGCTCCGCATCCATCTCCTTCATCACCGACTGCCGCCCGGGCCTCTCCATCCCCACCGAGGAGGTCCGCCGCGTGGTCGCCGGGGAGGAGGGCGCGCCGCCGGTCTCCGCCGTGGCCCCCGGGCGGCTGTTGCGGGTGGTGGAGCGCGCTGGGGTCGGGCTGCGGGTCACGCGGATGGCCGTGCCGCTGCGGGACACCGAGGAGGAGAACCTGCTCGATCACCTCGAGCCGTGTCTTGATTTCATCGATGAGGGCAGGAAGGAGGGGAACGTCCTTGTCCATTGCTTTGCTGGGGTCTCAAGGAGTGCTACCATCATCGTTGCTTATCTTATGAGAACAGAACAAAAATCTCTGGAAGAAGCACTAGAGTCTCTTAAGGAAGTCAATGAGTCAGCCTGCCCAAATGACGGTTTTCTTGAGCAGTTGAAACTGTTTGAAGAAATGGGCTTCAAAGTTGATACTTCAAGTCCTCTATACAAGCGTTTCCGTTTAAAATTGCTAGGCCAATCCTACAAAATTGGAGAGAAAATAGGAAGCTATGTATTTGAAGATGATCCTGGTCTTTCTGGACAGCCTAATTCTTCTACTCAGGATTTACCAAACAAACAAACCCAACAAACAGCATACCGCTGCAAAAAATGCAGGAGAATTGTTGCTGTGCAGGGCAATGTTGTGAGCCATACTCCTGGTGAGGGTGAATCTTGCTTTCAGTGGCAAAACAAAAGAAAGGGAGAGCGATCATATAGCAAAGAACAAGATTGCTCATCGTTGTTTGTTGAGCCTCTGAAGTGGATGACTCCAGTGGAAGACGGTGCTTTGGAGGGGAAGCTATCGTGTATCCACTGCGGAGCACGGCTAGGATATTTCAACTGGTCAGGAATCCAGTGCAACTGTGGCAGCTGGATCACCCCAGCCTTCCAAATTTCCAAGAGCAAAGTTGATATTAGTACGACTTAGATAGTTTTTTTTTTGTGGGGTGTACGACTTAGATAGTTGTCGGAGGCTAGCAGATTATTTCAGGACCATGTGAGCTGGTGTAAATACCGTTTTATCAGAAGGATTTACGAACTCGAAGGATCTCGACCGAAGATTTTCAGATCCATTGTGCACTAGATAGATATCATGAAGCATTAGCCTCAGAAACCTCCACTGTATTACTACTTGGTGTTAGAAGACTATGCCATCAGTTGCAATTGTTGGTTCTGATGATCTGAGAGGCTATCAACACGNATTTCATTTTGTTTTTTGTTTTTTTGTNTTAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL CB663729             [CAAACGGCGGCGGCGGCGACCTGGAGGCGGGCTTGCCTCCTTGTCGATCTCTACCTTCCCTCTTCCTCTGCTTGTCTAGAAGTTACTAGACCTTTCTAGCCCTTGTATTCCTCCATCTTCCACCCCAAAACCTTCCAATATTGTAACAGATTCACTAGCTCCTTGTGTTGGATTTGATACCACTACTTCTGAAATTGCATTGTTGAAGTGGGTCGCTAACAATTGTAAAAACGAAAAAACCCCTTGTCGTCTTCTCCATTGCGGCACTGAAACTCAGGCGGCGCCACCAGCCAGCGTACCACGACGTTGCTCTGCTAGGGTTTGCTCCACCCTCCTCCCACCTCGCGCCATCGGATTCCACCTTCCCAGGTCTCCCTCCCCTCCCGTCGCCATGCCGCACCTCGTCCGCGAGCGCCTCTTCTTCGGCGACATCAACGACGCCATCGCCGCGCTCACCACCACCACCGCGGAAGCCGGCGGCTTCACCCACCTCCTCTCCGTCGTCAGCTCCGCCTTCATCTCCTTCATCACCGACTGCCGCCCGGGCCTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL AK063731             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             CGGCTTCACCCACCTCCTCTCCGTCGTCAGCTCCGCATCCATCTCCTTCATCACCGACTGCCGCCCGGGCCTCTCCATCCCCACCGAGGAGGTCCGCCGCGTGGTCGCCGGGGAGGAGGGCGCGCCGCCGGTCTCCGCCGTGGCCCCCGGGCGGCTGTTGCGGGTGGTGGAGCGCGCTGGGGTCGGGCTGCGGGTCACGCGGATGGCCGTGCCGCTGCGGGACACCGAGGAGGAGAACCTGCTCGATCACCTCGAGCCGTGTCTTGATTTCATCGATGAGGGCAGGAAGGAGGGGAACGTCCTTGTCCATTGCTTTGCTGGGGTCTCAAGGAGTGCTACCATCATCGTTGCTTATCTTATGAGAACAGAACAAAAATCTCTGGAAGAAGCACTAGAGTCTCTTAAGGAAGTCAATGAGTCAGCCTGCCCAAATGACGGTTTTCTTGAGCAGTTGAAACTGTTTGAAGAAATGGGCTTCAAAGTTGATACTTCAAGTCCTCTATACAAGCGTTTCCGTTTAAAATTGCTAGGCCAATCCTACAAAATTGGAGAGAAAATAGGAAGCTATGTATTTGAAGATGATCCTGGTCTTTCTGGACAGCCTAATTCTTCTACTCAGGATTTACCAAACAAACAAACCCAACAAACAGCATACCGCTGCAAAAAATGCAGGAGAATTGTTGCTGTGCAGGGCAATGTTGTGAGCCATACTCCTGGTGAGGGTGAATCTTGCTTTCAGTGGCAAAACAAAAGAAAGGGAGAGCGATCATATAGCAAAGAACAAGATTGCTCATCGTTGTTTGTTGAGCCTCTGAAGTGGATGACTCCAGTGGAAGACGGTGCTTTGGAGGGGAAGCTATCGTGTATCCACTGCGGAGCACGGCTAGGATATTTCAACTGGTCAGGAATCCAGTGCAACTGTGGCAGCTGGATCACCCCAGCCTTCCAAATTTCCAAGAGCAAAGTTGATATTAGTACGACTTAGATAGTTTTTTTTTTGTGGGGTGTACGACTTAGATAGTTGTCGGAGGCTAGCAGATTATTTCAGGACCATGTGAGCTGGTGTAAATACCGTTTTATCAGAAGGATTTACGAACTCGAAGGATCTCGACCGAAGATTTTCAGATCCATTGTGCACTAGATAGATATCATGAAGCATTAGCCTCAGAAACCTCCACTGTATTACTACTTGGTGTTAGAAGACTATGCCATCAGTTGCAAT                                                                                              ]
[+] EMBL AU055910             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             CGGCTTCACCCACCTCCTCTCCGTCGTCAGCTCCGCATCCATCTCCTTCATCACCGACTGCCGCCCGGGCCTCTCCATCCCCACCGAGGAGGTCCGCCGCGTGGTCGCCGGGGAGGAGGGCGCGCCGCCGGTCTCCGCCGTGGCCCCCGGGCGGCTGTTGCGGGTGGTGGAGCGCGCTGGGGTCGGGCTGCGGGTCACGCGGATGGCCGTGCCGCTGCGGGACACCGAGGAGGAGAACCTGCTCGATCACNTCGAGCCGTGTCTTGATTTCATCGATGAGGGCAGGAAGGAGGGGAACGTCCTTGTCCATTGCTTTGCTGGGGTCTCAAGGAGTGCTANCATCATCGTTGCTTATCTTATGAGAACAGAACAAAAATCTCTGGAAGAAGCACTAGAGTCTCTTAAGGAAGTCAATGAGTCAGCCTGCCCAAATGACGGTTTTCTTGAGNAGTTGAAACTGTTTGAAGAAATGGGCTTCAAAGTTGATACTTCAAGTNCTCTATAAAAGCGTTTCCGTTTAAAATTGCTAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL AU055911             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ACGAACTCGAAGGATCTCGACCGAAGATTTTCAGATCCATTGTGCNCTAGATAGATATCATGAAGCATTAGCCTCAGAAACCTCCACTGTATTACTACTTGGTGTTAGAAGACTATGCCATCAGTTGCAATTGTTGGTTCTGATGATCTGAGAGGCTATCAACACGNATTTCATTTTGTTTTTTGTTTTTTTGTNTTAAAAAAAAAAAAAAAAAAAAAAAAAAAA]


>consensus_10218#0 CAAACGGCGGCGGCGGCGACCTGGAGGCGGGCTTGCCTCCTTGTCGATCTCTACCTTCCC TCTTCCTCTGCTTGTCTAGAAGTTACTAGACCTTTCTAGCCCTTGTATTCCTCCATCTTC CACCCCAAAACCTTCCAATATTGTAACAGATTCACTAGCTCCTTGTGTTGGATTTGATAC CACTACTTCTGAAATTGCATTGTTGAAGTGGGTCGCTAACAATTGTAAAAACGAAAAAAC CCCTTGTCGTCTTCTCCATTGCGGCACTGAAACTCAGGCGGCGCCACCAGCCAGCGTACC ACGACGTTGCTCTGCTAGGGTTTGCTCCACCCTCCTCCCACCTCGCGCCATCGGATTCCA CCTTCCCAGGTCTCCCTCCCCTCCCGTCGCCATGCCGCACCTCGTCCGCGAGCGCCTCTT CTTCGGCGACATCAACGACGCCATCGCCGCGCTCACCACCACCACCGCGGAAGCCGGCGG CTTCACCCACCTCCTCTCCGTCGTCAGCTCCGCATCCATCTCCTTCATCACCGACTGCCG CCCGGGCCTCTCCATCCCCACCGAGGAGGTCCGCCGCGTGGTCGCCGGGGAGGAGGGCGC GCCGCCGGTCTCCGCCGTGGCCCCCGGGCGGCTGTTGCGGGTGGTGGAGCGCGCTGGGGT CGGGCTGCGGGTCACGCGGATGGCCGTGCCGCTGCGGGACACCGAGGAGGAGAACCTGCT CGATCACCTCGAGCCGTGTCTTGATTTCATCGATGAGGGCAGGAAGGAGGGGAACGTCCT TGTCCATTGCTTTGCTGGGGTCTCAAGGAGTGCTACCATCATCGTTGCTTATCTTATGAG AACAGAACAAAAATCTCTGGAAGAAGCACTAGAGTCTCTTAAGGAAGTCAATGAGTCAGC CTGCCCAAATGACGGTTTTCTTGAGCAGTTGAAACTGTTTGAAGAAATGGGCTTCAAAGT TGATACTTCAAGTCCTCTATACAAGCGTTTCCGTTTAAAATTGCTAGGCCAATCCTACAA AATTGGAGAGAAAATAGGAAGCTATGTATTTGAAGATGATCCTGGTCTTTCTGGACAGCC TAATTCTTCTACTCAGGATTTACCAAACAAACAAACCCAACAAACAGCATACCGCTGCAA AAAATGCAGGAGAATTGTTGCTGTGCAGGGCAATGTTGTGAGCCATACTCCTGGTGAGGG TGAATCTTGCTTTCAGTGGCAAAACAAAAGAAAGGGAGAGCGATCATATAGCAAAGAACA AGATTGCTCATCGTTGTTTGTTGAGCCTCTGAAGTGGATGACTCCAGTGGAAGACGGTGC TTTGGAGGGGAAGCTATCGTGTATCCACTGCGGAGCACGGCTAGGATATTTCAACTGGTC AGGAATCCAGTGCAACTGTGGCAGCTGGATCACCCCAGCCTTCCAAATTTCCAAGAGCAA AGTTGATATTAGTACGACTTAGATAGTTTTTTTTTTGTGGGGTGTACGACTTAGATAGTT GTCGGAGGCTAGCAGATTATTTCAGGACCATGTGAGCTGGTGTAAATACCGTTTTATCAG AAGGATTTACGAACTCGAAGGATCTCGACCGAAGATTTTCAGATCCATTGTGCACTAGAT AGATATCATGAAGCATTAGCCTCAGAAACCTCCACTGTATTACTACTTGGTGTTAGAAGA CTATGCCATCAGTTGCAATTGTTGGTTCTGATGATCTGAGAGGCTATCAACACGNATTTC ATTTTGTTTTTTGTTTTTTTGTNTTAAAAAAAAAAAAAAAAAAAAAAAAAAAA



consensusID : consensus_10218#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1114
fasta sequence
                              [CGGCTTCACCCACCTCCTCTCCGTCGTCAGCTCCGCATCCATCTCCTTCATCACCGACTGCCGCCCGGGCCTCTCCATCCCCACCGAGGAGGTCCGCCGCGTGGTCGCCGGGGAGGAGGGCGCGCCGCCGGTCTCCGCCGTGGCCCCCGGGCGGCTGTTGCGGGTGGTGGAGCGCGCTGGGGTCGGGCTGCGGGTCACGCGGATGGCCGTGCCGCTGCGGGACACCGAGGAGGAGAACCTGCTCGATCACCTCGAGCCGTGTCTTGATTTCATCGATGAGGGCAGGAAGGAGGGGAACGTCCTTGTCCATTGCTTTGCTGGGGTCTCAAGGAGTGCTACCATCATCGTTGCTTATCTTATGAGAACAGAACAAAAATCTCTGGAAGGTTCGACTATTCCAACAAAATGGGTGATTTTTCAGTCGTTGCTTTGGTTATTACTCCAGATGAATACCTGAGTTGTCTTTTTGATACACGCTGGTGACATGCCATGCTTTTTGTCTTGTTTCAGAAGCACTAGAGTCTCTTAAGGAAGTCAATGAGTCAGCCTGCCCAAATGACGGTTTTCTTGAGCAGTTGAAACTGTTTGAAGAAATGGGCTTCAAAGTTGATACTTCAAGTCCTCTATACAAGCGTTTCCGTTTAAAATTGCTAGGCCAATCCTACAAAATTGGAGAGAAAATAGGAAGCTATGTATTTGAAGATGATCCTGGTCTTTCTGGACAGCCTAATTCTTCTACTCAGGATTTACCAAACAAACAAACCCAACAAACAGCATACCGCTGCAAAAAATGCAGGAGAATTGTTGCTGTGCAGGGCAATGTTGTGAGCCATACTCCTGGTGAGGGTGAATCTTGCTTTCAGTGGCAAAACAAAAGAAAGGGAGAGCGATCATATAGCAAAGAACAAGATTGCTCATCGTTGTTTGTTGAGCCTCTGAAGTGGATGACTCCAGGTAATTCACCCTCGTAATTCAGCCCTTTGCAGTTACCTACGGTCACAAATGACTTTTCATGTTGATCTCCTATTGATGTGGTTCATAGCAAACCTGTGTTTACTACTGAGTGCTCGTCCAATCTGTCATGTGATTCTGTAATTGGTCGGCCAACCTTTGG]

[+] EMBL AK106395             [CGGCTTCACCCACCTCCTCTCCGTCGTCAGCTCCGCATCCATCTCCTTCATCACCGACTGCCGCCCGGGCCTCTCCATCCCCACCGAGGAGGTCCGCCGCGTGGTCGCCGGGGAGGAGGGCGCGCCGCCGGTCTCCGCCGTGGCCCCCGGGCGGCTGTTGCGGGTGGTGGAGCGCGCTGGGGTCGGGCTGCGGGTCACGCGGATGGCCGTGCCGCTGCGGGACACCGAGGAGGAGAACCTGCTCGATCACCTCGAGCCGTGTCTTGATTTCATCGATGAGGGCAGGAAGGAGGGGAACGTCCTTGTCCATTGCTTTGCTGGGGTCTCAAGGAGTGCTACCATCATCGTTGCTTATCTTATGAGAACAGAACAAAAATCTCTGGAAGGTTCGACTATTCCAACAAAATGGGTGATTTTTCAGTCGTTGCTTTGGTTATTACTCCAGATGAATACCTGAGTTGTCTTTTTGATACACGCTGGTGACATGCCATGCTTTTTGTCTTGTTTCAGAAGCACTAGAGTCTCTTAAGGAAGTCAATGAGTCAGCCTGCCCAAATGACGGTTTTCTTGAGCAGTTGAAACTGTTTGAAGAAATGGGCTTCAAAGTTGATACTTCAAGTCCTCTATACAAGCGTTTCCGTTTAAAATTGCTAGGCCAATCCTACAAAATTGGAGAGAAAATAGGAAGCTATGTATTTGAAGATGATCCTGGTCTTTCTGGACAGCCTAATTCTTCTACTCAGGATTTACCAAACAAACAAACCCAACAAACAGCATACCGCTGCAAAAAATGCAGGAGAATTGTTGCTGTGCAGGGCAATGTTGTGAGCCATACTCCTGGTGAGGGTGAATCTTGCTTTCAGTGGCAAAACAAAAGAAAGGGAGAGCGATCATATAGCAAAGAACAAGATTGCTCATCGTTGTTTGTTGAGCCTCTGAAGTGGATGACTCCAGGTAATTCACCCTCGTAATTCAGCCCTTTGCAGTTACCTACGGTCACAAATGACTTTTCATGTTGATCTCCTATTGATGTGGTTCATAGCAAACCTGTGTTTACTACTGAGTGCTCGTCCAATCTGTCATGTGATTCTGTAATTGGTCGGCCAACCTTTGG]


>consensus_10218#1 CGGCTTCACCCACCTCCTCTCCGTCGTCAGCTCCGCATCCATCTCCTTCATCACCGACTG CCGCCCGGGCCTCTCCATCCCCACCGAGGAGGTCCGCCGCGTGGTCGCCGGGGAGGAGGG CGCGCCGCCGGTCTCCGCCGTGGCCCCCGGGCGGCTGTTGCGGGTGGTGGAGCGCGCTGG GGTCGGGCTGCGGGTCACGCGGATGGCCGTGCCGCTGCGGGACACCGAGGAGGAGAACCT GCTCGATCACCTCGAGCCGTGTCTTGATTTCATCGATGAGGGCAGGAAGGAGGGGAACGT CCTTGTCCATTGCTTTGCTGGGGTCTCAAGGAGTGCTACCATCATCGTTGCTTATCTTAT GAGAACAGAACAAAAATCTCTGGAAGGTTCGACTATTCCAACAAAATGGGTGATTTTTCA GTCGTTGCTTTGGTTATTACTCCAGATGAATACCTGAGTTGTCTTTTTGATACACGCTGG TGACATGCCATGCTTTTTGTCTTGTTTCAGAAGCACTAGAGTCTCTTAAGGAAGTCAATG AGTCAGCCTGCCCAAATGACGGTTTTCTTGAGCAGTTGAAACTGTTTGAAGAAATGGGCT TCAAAGTTGATACTTCAAGTCCTCTATACAAGCGTTTCCGTTTAAAATTGCTAGGCCAAT CCTACAAAATTGGAGAGAAAATAGGAAGCTATGTATTTGAAGATGATCCTGGTCTTTCTG GACAGCCTAATTCTTCTACTCAGGATTTACCAAACAAACAAACCCAACAAACAGCATACC GCTGCAAAAAATGCAGGAGAATTGTTGCTGTGCAGGGCAATGTTGTGAGCCATACTCCTG GTGAGGGTGAATCTTGCTTTCAGTGGCAAAACAAAAGAAAGGGAGAGCGATCATATAGCA AAGAACAAGATTGCTCATCGTTGTTTGTTGAGCCTCTGAAGTGGATGACTCCAGGTAATT CACCCTCGTAATTCAGCCCTTTGCAGTTACCTACGGTCACAAATGACTTTTCATGTTGAT CTCCTATTGATGTGGTTCATAGCAAACCTGTGTTTACTACTGAGTGCTCGTCCAATCTGT CATGTGATTCTGTAATTGGTCGGCCAACCTTTGG



consensusID : consensus_10218#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 836
fasta sequence
                              [TGAGTCAGCCTGCCCAAATGACGGTTTTCTTGAGCAGTTGAAACTGTTTGAAGAAATGGGCTTCAAAGTTGATACTTCAAGTCCTCTATACAAGCGTTTCCGTTTAAAATTGCTAGGCCAATCCTACAAAATTGGAGAGAAAATAGGAAGCTATGTATTTGAAGATGATCCTGGTCTTTCTGGACAGCCTAATTCTTCTACTCAGAATTTACCAAACAAGCAAACCCAACAACCAGCATACCGCTGCAAAAAATGCAGGAGAATTATTGCTGTGCAGGGCAATGTTGTGAGCCACACTCCTGGTGAGGGTGAATCTTGCTTTCAGTGGCAAAACAAGAGAAAAGGAGAGCGATCATATAGCAAAGAACAAGATTGCTCATCGTTGTTTGTTGAGCCTCTGAAGTGGATGACTCCAGTGGAAGATGGTGCTTTGGAGGGGAAGCTATCGTGTATCCACTGCGGAGCACGGCTAGGATATTTCAACTGGTCAGGAATCCAGTGCAACTGTGGCAGTTGGATCACCCCAGCCTTCCAAATTTCCAAGAGCAAAGTTGATATTAGTACCACTTAGATAGTTGTCAGAGGCTAGTAGATTATTTCAGGACCATGTGAGCTGGTGTAAATACCGTTTTATCAGAAGGATTTACGAACTCGAAGGATCTCGACCGAAGATTTTCAGATCCATTGTGCACTAGATAGATACCATGAAGAAATATAGTCTCAGAAACCACCACTTGTATTGCTACTTGCTGTTAGACTATGCCATCAATTGTAATTGTTGGTTCTGATGATCTGAAATGCTATCAGCACGAATTTCATTTTTTTTCTTCTAAAAA]

[-] EMBL CB663730             [TGAGTCAGCCTGCCCAAATGACGGTTTTCTTGAGCAGTTGAAACTGTTTGAAGAAATGGGCTTCAAAGTTGATACTTCAAGTCCTCTATACAAGCGTTTCCGTTTAAAATTGCTAGGCCAATCCTACAAAATTGGAGAGAAAATAGGAAGCTATGTATTTGAAGATGATCCTGGTCTTTCTGGACAGCCTAATTCTTCTACTCAGAATTTACCAAACAAGCAAACCCAACAACCAGCATACCGCTGCAAAAAATGCAGGAGAATTATTGCTGTGCAGGGCAATGTTGTGAGCCACACTCCTGGTGAGGGTGAATCTTGCTTTCAGTGGCAAAACAAGAGAAAAGGAGAGCGATCATATAGCAAAGAACAAGATTGCTCATCGTTGTTTGTTGAGCCTCTGAAGTGGATGACTCCAGTGGAAGATGGTGCTTTGGAGGGGAAGCTATCGTGTATCCACTGCGGAGCACGGCTAGGATATTTCAACTGGTCAGGAATCCAGTGCAACTGTGGCAGTTGGATCACCCCAGCCTTCCAAATTTCCAAGAGCAAAGTTGATATTAGTACCACTTAGATAGTTGTCAGAGGCTAGTAGATTATTTCAGGACCATGTGAGCTGGTGTAAATACCGTTTTATCAGAAGGATTTACGAACTCGAAGGATCTCGACCGAAGATTTTCAGATCCATTGTGCACTAGATAGATACCATGAAGAAATATAGTCTCAGAAACCACCACT                                                                                                     ]
[+] EMBL BI796347             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     TTCAGGACCATGTGAGCTGGTGTAAATACCGTTTTATCAGAAGGATTTACGAACTCGAAGGATCTCGACCGAAGATTTTCAGATCC TTGTGCACTAGATAGATACCATGAAGAAATATTGTCTCAGAAACCACCACTTGTATTGCTACTTGCTGTTAGACTATGCCATCAATTGTAATTGTTGGTTCTGATGATCTGAAATGCTATCAGCACGAATTTCATTTTTTTTCTTCTAAAAA]


>consensus_10218#2 TGAGTCAGCCTGCCCAAATGACGGTTTTCTTGAGCAGTTGAAACTGTTTGAAGAAATGGG CTTCAAAGTTGATACTTCAAGTCCTCTATACAAGCGTTTCCGTTTAAAATTGCTAGGCCA ATCCTACAAAATTGGAGAGAAAATAGGAAGCTATGTATTTGAAGATGATCCTGGTCTTTC TGGACAGCCTAATTCTTCTACTCAGAATTTACCAAACAAGCAAACCCAACAACCAGCATA CCGCTGCAAAAAATGCAGGAGAATTATTGCTGTGCAGGGCAATGTTGTGAGCCACACTCC TGGTGAGGGTGAATCTTGCTTTCAGTGGCAAAACAAGAGAAAAGGAGAGCGATCATATAG CAAAGAACAAGATTGCTCATCGTTGTTTGTTGAGCCTCTGAAGTGGATGACTCCAGTGGA AGATGGTGCTTTGGAGGGGAAGCTATCGTGTATCCACTGCGGAGCACGGCTAGGATATTT CAACTGGTCAGGAATCCAGTGCAACTGTGGCAGTTGGATCACCCCAGCCTTCCAAATTTC CAAGAGCAAAGTTGATATTAGTACCACTTAGATAGTTGTCAGAGGCTAGTAGATTATTTC AGGACCATGTGAGCTGGTGTAAATACCGTTTTATCAGAAGGATTTACGAACTCGAAGGAT CTCGACCGAAGATTTTCAGATCCATTGTGCACTAGATAGATACCATGAAGAAATATAGTC TCAGAAACCACCACTTGTATTGCTACTTGCTGTTAGACTATGCCATCAATTGTAATTGTT GGTTCTGATGATCTGAAATGCTATCAGCACGAATTTCATTTTTTTTCTTCTAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10218#0      CAAACGGCGGCGGCGGCGACCTGGAGGCGGGCTTGCCTCCTTGTCGATCTCTACCTTCCC 60
consensus_10218#2      ------------------------------------------------------------
consensus_10218#1      ------------------------------------------------------------
                                                                                   

consensus_10218#0      TCTTCCTCTGCTTGTCTAGAAGTTACTAGACCTTTCTAGCCCTTGTATTCCTCCATCTTC 120
consensus_10218#2      ------------------------------------------------------------
consensus_10218#1      ------------------------------------------------------------
                                                                                   

consensus_10218#0      CACCCCAAAACCTTCCAATATTGTAACAGATTCACTAGCTCCTTGTGTTGGATTTGATAC 180
consensus_10218#2      ------------------------------------------------------------
consensus_10218#1      ------------------------------------------------------------
                                                                                   

consensus_10218#0      CACTACTTCTGAAATTGCATTGTTGAAGTGGGTCGCTAACAATTGTAAAAACGAAAAAAC 240
consensus_10218#2      ------------------------------------------------------------
consensus_10218#1      ------------------------------------------------------------
                                                                                   

consensus_10218#0      CCCTTGTCGTCTTCTCCATTGCGGCACTGAAACTCAGGCGGCGCCACCAGCCAGCGTACC 300
consensus_10218#2      ------------------------------------------------------------
consensus_10218#1      ------------------------------------------------------------
                                                                                   

consensus_10218#0      ACGACGTTGCTCTGCTAGGGTTTGCTCCACCCTCCTCCCACCTCGCGCCATCGGATTCCA 360
consensus_10218#2      ------------------------------------------------------------
consensus_10218#1      -----------------------------------------------------CGGCTTC 7
                                                                                   

consensus_10218#0      CCTTCCCAGGTCTCCCTCCCCTCCCGTCGCCATGCCGCACCTCGTCCGCGAGCGCCTCTT 420
consensus_10218#2      ------------------------------------------------------------
consensus_10218#1      ACCCACCTCCTCTCCGTCGTCAGCTCCGCATCCATCTCCTTCATCACCGACTGCCGCCCG 67
                                                                                   

consensus_10218#0      CTTCGGCGACATCAACGACGCCATCGCCGCGCTCACCACCACCACCGCGGAAGCCGGCGG 480
consensus_10218#2      ------------------------------------------------------------
consensus_10218#1      GGCCTCTCCATCCCCACCGAGGAGGTCCGCCGCGTGGTCGCCGGGGAGGAGGGCGCGCCG 127
                                                                                   

consensus_10218#0      CTTCACCCACCTCCTCTCCGTCGTCAGCTCCGCATCCATCTCCTTCATCACCGACTGCCG 540
consensus_10218#2      ------------------------------------------------------------
consensus_10218#1      CCGGTCTCCGCCGTGGCCCCCGGGCGGCTGTTGCGGGTGGTGGAGCGCGCTGGGGTCGGG 187
                                                                                   

consensus_10218#0      CCCGGGCCTCTCCATCCCCACCGAGGAGGTCCGCCGCGTGGTCGCCGGGGAGGAGGGCGC 600
consensus_10218#2      ------------------------------------------------------------
consensus_10218#1      CTGCGGGTCACGCGGATGGCCGTGCCGCTGCGGGACACCGAGGAGGAGAACCTGCTCGAT 247
                                                                                   

consensus_10218#0      GCCGCCGGTCTCCGCCGTGGCCCCCGGGCGGCTGTTGCGGGTGGTGGAGCGCGCTGGGGT 660
consensus_10218#2      ------------------------------------------------------------
consensus_10218#1      CACCTCGAGCCGTGTCTTGATTTCATCGATGAGGGCAGGAAGGAGGGGAACGTCCTTGTC 307
                                                                                   

consensus_10218#0      CGGGCTGCGGGTCACGCGGATGGCCGTGCCGCTGCGGGACACCGAGGAGGAGAACCTGCT 720
consensus_10218#2      ------------------------------------------------------------
consensus_10218#1      CATTGCTTTGCTGGGGTCTCAAGGAGTGCTACCATCATCGTTGCTTATCTTATGAGAACA 367
                                                                                   

consensus_10218#0      CGATCACCTCGAGCCGTGTCTTGATTTCATCGATGAGGGCAGGAAGGAGGGGAACGTCCT 780
consensus_10218#2      ------------------------------------------------------------
consensus_10218#1      GAACAAAAATCTCTGGAAGGTTCGACTATTCCAACAAAATGGGTGATTTTTCAGTCGTTG 427
                                                                                   

consensus_10218#0      TGTCCATTGCTTTGCTGGGGTCTCAAGGAGTGCTACCATCATCGTTGCTTATCTTATGAG 840
consensus_10218#2      ------------------------------------------------------------
consensus_10218#1      CTTTGGTTATTACTCCAGATGAATACCTGAGTTGTCTTTTTGATACACGCTGGTGACATG 487
                                                                                   

consensus_10218#0      AACAGAACAAAAATCTCTGGAAGAAGCACTAGAGTCTCTTAAGGAAGTCAATGAGTCAGC 900
consensus_10218#2      ---------------------------------------------------TGAGTCAGC 9
consensus_10218#1      CCATGCTTTTTGTCTTGTTTCAGAAGCACTAGAGTCTCTTAAGGAAGTCAATGAGTCAGC 547
                                                                          *********

consensus_10218#0      CTGCCCAAATGACGGTTTTCTTGAGCAGTTGAAACTGTTTGAAGAAATGGGCTTCAAAGT 960
consensus_10218#2      CTGCCCAAATGACGGTTTTCTTGAGCAGTTGAAACTGTTTGAAGAAATGGGCTTCAAAGT 69
consensus_10218#1      CTGCCCAAATGACGGTTTTCTTGAGCAGTTGAAACTGTTTGAAGAAATGGGCTTCAAAGT 607
                       ************************************************************

consensus_10218#0      TGATACTTCAAGTCCTCTATACAAGCGTTTCCGTTTAAAATTGCTAGGCCAATCCTACAA 1020
consensus_10218#2      TGATACTTCAAGTCCTCTATACAAGCGTTTCCGTTTAAAATTGCTAGGCCAATCCTACAA 129
consensus_10218#1      TGATACTTCAAGTCCTCTATACAAGCGTTTCCGTTTAAAATTGCTAGGCCAATCCTACAA 667
                       ************************************************************

consensus_10218#0      AATTGGAGAGAAAATAGGAAGCTATGTATTTGAAGATGATCCTGGTCTTTCTGGACAGCC 1080
consensus_10218#2      AATTGGAGAGAAAATAGGAAGCTATGTATTTGAAGATGATCCTGGTCTTTCTGGACAGCC 189
consensus_10218#1      AATTGGAGAGAAAATAGGAAGCTATGTATTTGAAGATGATCCTGGTCTTTCTGGACAGCC 727
                       ************************************************************

consensus_10218#0      TAATTCTTCTACTCAGGATTTACCAAACAAACAAACCCAACAAACAGCATACCGCTGCAA 1140
consensus_10218#2      TAATTCTTCTACTCAGAATTTACCAAACAAGCAAACCCAACAACCAGCATACCGCTGCAA 249
consensus_10218#1      TAATTCTTCTACTCAGGATTTACCAAACAAACAAACCCAACAAACAGCATACCGCTGCAA 787
                       **************** ************* ************ ****************

consensus_10218#0      AAAATGCAGGAGAATTGTTGCTGTGCAGGGCAATGTTGTGAGCCATACTCCTGGTGAGGG 1200
consensus_10218#2      AAAATGCAGGAGAATTATTGCTGTGCAGGGCAATGTTGTGAGCCACACTCCTGGTGAGGG 309
consensus_10218#1      AAAATGCAGGAGAATTGTTGCTGTGCAGGGCAATGTTGTGAGCCATACTCCTGGTGAGGG 847
                       **************** **************************** **************

consensus_10218#0      TGAATCTTGCTTTCAGTGGCAAAACAAAAGAAAGGGAGAGCGATCATATAGCAAAGAACA 1260
consensus_10218#2      TGAATCTTGCTTTCAGTGGCAAAACAAGAGAAAAGGAGAGCGATCATATAGCAAAGAACA 369
consensus_10218#1      TGAATCTTGCTTTCAGTGGCAAAACAAAAGAAAGGGAGAGCGATCATATAGCAAAGAACA 907
                       *************************** ***** **************************

consensus_10218#0      AGATTGCTCATCGTTGTTTGTTGAGCCTCTGAAGTGGATGACTCCAGTGGAAGACGGTGC 1320
consensus_10218#2      AGATTGCTCATCGTTGTTTGTTGAGCCTCTGAAGTGGATGACTCCAGTGGAAGATGGTGC 429
consensus_10218#1      AGATTGCTCATCGTTGTTTGTTGAGCCTCTGAAGTGGATGACTCCAG--GTAATT--CAC 963
                       ***********************************************  * *       *

consensus_10218#0      TTTGGAGGGGAAGCTATCGTGTATCCACTGCGGAGCACGGCTAGGATATTTCA-ACTGGT 1379
consensus_10218#2      TTTGGAGGGGAAGCTATCGTGTATCCACTGCGGAGCACGGCTAGGATATTTCA-ACTGGT 488
consensus_10218#1      CCTCGTAATTCAGCCCTT-TGCAGTTACCTACGGTCACAAAT--GACTTTTCATGTTGAT 1020
                         * *      ***  *  ** *   **    *  ***   *  **  *****   ** *

consensus_10218#0      CAGGAATCCAGTGCAACTGTGGCAGCTGGATCACCCCAGCCTTCCAAATTTCCAAGAGCA 1439
consensus_10218#2      CAGGAATCCAGTGCAACTGTGGCAGTTGGATCACCCCAGCCTTCCAAATTTCCAAGAGCA 548
consensus_10218#1      CTCCTATTGATGTGGTTCATAGCAAACCTGTGTTTACTACTGAGTGCTCGTCCAATCTGT 1080
                       *    **  *         * ***      *     *  *          *****     

consensus_10218#0      AAGTTGATATTAGTACGACTTAGATAGTTTTTTTTTTGTGGGGTGTACGACTTAGATAGT 1499
consensus_10218#2      AAGTTGATATTAGTACCACTTAGATAGTT------------------------------- 577
consensus_10218#1      CATGTGATTCTGTAATTGGTCGGCCAACCTTTGG-------------------------- 1114
                        *  ****  *   *    *  *  *                                  

consensus_10218#0      TGTCGGAGGCTAGCAGATTATTTCAGGACCATGTGAGCTGGTGTAAATACCGTTTTATCA 1559
consensus_10218#2      -GTCAGAGGCTAGTAGATTATTTCAGGACCATGTGAGCTGGTGTAAATACCGTTTTATCA 636
consensus_10218#1      ------------------------------------------------------------
                                                                                   

consensus_10218#0      GAAGGATTTACGAACTCGAAGGATCTCGACCGAAGATTTTCAGATCCATTGTGCACTAGA 1619
consensus_10218#2      GAAGGATTTACGAACTCGAAGGATCTCGACCGAAGATTTTCAGATCCATTGTGCACTAGA 696
consensus_10218#1      ------------------------------------------------------------
                                                                                   

consensus_10218#0      TAGATATCATGAAGCATTA--GCCTCAGAAACCTCCACT-GTATTACTACTTGGTGTTAG 1676
consensus_10218#2      TAGATACCATGAAGAAATATAGTCTCAGAAACCACCACTTGTATTGCTACTTGCTGTTAG 756
consensus_10218#1      ------------------------------------------------------------
                                                                                   

consensus_10218#0      AAGACTATGCCATCAGTTGCAATTGTTGGTTCTGATGATCTGAGAGGCTATCAACACGNA 1736
consensus_10218#2      A---CTATGCCATCAATTGTAATTGTTGGTTCTGATGATCTGAAATGCTATCAGCACGAA 813
consensus_10218#1      ------------------------------------------------------------
                                                                                   

consensus_10218#0      TTTCATTTTGTTTTTTGTTTTTTTGTNTTAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1793
consensus_10218#2      TTTCATTTT-----------TTTTCTTCTAAAAA----------------------- 836
consensus_10218#1      ---------------------------------------------------------
                                                                                




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)