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Oryza sativa
cluster # 10402 cluster # 10402       Sequences # 7       consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10402#0 length = 1521 sequences # 5  
 consensus_10402#1 length = 836 sequences # 1  
consensus_10402#2 length = 818 sequences # 1  
consensusID : consensus_10402#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1521
fasta sequence 
                              [TTTCTCTTCTCAAAAAAAAAAAAAAAATCCAGCGGCGGCGGCGGCGCACATGGATCAGATGGCGGAGCGGCAGCACAAGAAGCGGAAGCCGGAGAAGATGGCCGGCGCGCGCACCAGCGGCCATGATAAGGAGGAGGAGAAGAAGGTGAAGGCTCCTTCTGTGTACCTGGTGGTAGGCCATGAGGTGAGCTGGGCAACCTACTCCGTGTTCAAGGTGGATCCCTACGCGGCGGCGAAGAGAGGCGGCGGCGGCGGCGACGAGGAGGATCCCGCTCCGGTGCCTATCCCTCGCCGGCTCGCCCGCATCAGCGCCAAGTTCTGCATGTCTTTCGCCCCCGTGCCCGTGCGCTCATGGATCGTCGGCGTCGGGGGCGATTCAGCGGATGAGGACTACGCCCCGGAGACCATCGTCTTCGACACCGAGACTCGCGCCGTGATCCGGGGGCCCAACCTCCTGTCGACCAAGCTCCACCCGGTTGTGCTCACCATCGGCCACAAGATCTACGCCCTGGCACGGTATCCCTCCGTCACGGGGCAACTCGACTTCGTTCCATGGTTCGAGGTGCTTGATCTCTCCCAAGCGCGCGTGGTCGATGGCCATCTAGAGAGCTGCGAGTGGAAGCCCCTGCCACGGCCTCCCTTCTTCCCATGGGACCTCACCCCATTGCAGTACCTTTCTCCGCCAATGGTTACTGTCGAGTCCTACGTTGCACTGGCCTCCTGCATTCTGGTGTCATTATCTCAGCAGGAGGGCACGCACATGTTTGATGTCGACAAGGAGCAATGGTCGAAACTGGATGACAACAGCCTGCCATTCGTCAGAGGCGCCGTTCCACACGGACCCATCTTCCTTGGCTTATCGAGAGCCAAGAAAATCATCACCGCATACAATATCACAGTGGTCTGCCAACCAAGGTCAGGCGGCACAGCGCCGTCCTTATCAATTGTTGAGTTCCCTGTGGTGTCTGACATGGAAGAGGAGATCTTAAGCACACCAATATTTCTTTCTCTCGGTAGCCCTGGCTTCTGTTCTTTGAAAAGTTGGAGCGACCACCCAACGACGGATGATCCATGTACTCGTGCACGTATCAAATTGATGGCATACCATACAGAGGAACCCATATCACAAGAGTACATCGAGTCTTCTCATGGCTTATTGATACCGAACCAGTGGAAACAGGTGTACGAGATATGTGATTCGTCCAGGGAATTGATTTGGCAATGCCTGATCACTGCAATGTCCTTATGAGTATATTCCATGATGTTGGAGCCACCAGAAGTTTATTGTAGAGGCTGGCTTAAGAAAACGGTTTACTTGTAGCACCCTACAATTCCAGTAAATTCTTCAGAGTACAACAGCTTTGCATGGCTTCGAACTTAGGGAGTAGTGCTGCAGGGCATCTTTTGCTTGTGTATTAAGTGGATTTAGAATATGATATTTGAGGAGAAATGATCCCCTGTAGTATCTATGCTGGACTGATCTAATTGAACCTGTCTAAAAGAGTTTCATGTATGAAACAG]

[+] EMBL AK060256             [TTTCTCTTCTCAAAAAAAAAAAAAAAATCCAGCGGCGGCGGCGGCGCACATGGATCAGATGGCGGAGCGGCAGCACAAGAAGCGGAAGCCGGAGAAGATGGCCGGCGCGCGCACCAGCGGCCATGATAAGGAGGAGGAGAAGAAGGTGAAGGCTCCTTCTGTGTACCTGGTGGTAGGCCATGAGGTGAGCTGGGCAACCTACTCCGTGTTCAAGGTGGATCCCTACACGGCGGCGAAGAGAGGCGGCGGCGGCGGCGACGAGGAGGATCCCGCTCCGGTGCCTATCCCTCGCCGGCTCGCCCGCATCAGCGCCAAGTTCTGCATGTCTTTCGCCCCCGTGCCCGTGCGCTCATGGATCGTCGGCGTCGGGGGCGATTCAGCGGATGAGGACTACGCCCCGGAGACCATCGTCTTCGACACCGAGACTCGCGCCGTGATCCGGGGGCCCAACCTCCTGTCGACCAAGCTCCACCCGGTTGTGCTCACCATCGGCCACAAGATCTACGCCCTGGCACGGTATCCCTCCGTCACGGGGCAACTCGACTTCGTTCCATGGTTCGAGGTGCTTGATCTCTCCCAAGCGCGCGTGGTCGATGGCCATCTAGAGAGCTGCGAGTGGAAGCCCCTGCCACGGCCTCCCTTCTTCCCATGGGACCTCACCCCATTGCAGTACCTTTCTCCGCCAATGGTTACTGTCGAGTCCTACGTTGCACTGGCCTCCTGCATTCTGGTGTCATTATCTCAGCAGGAGGGCACGCACATGTTTGATGTCGACAAGGAGCAATGGTCGAAACTGGATGACAACAGCCTGCCATTCGTCAGAGGCGCCGTTCCACACGGACCCATCTTCCTTGGCTTATCGAGAGCCAAGAAAATCATCACCGCATACAATATCACAGTGGTCTGCCAACCAAGGTCAGGCGGCACAGCGCCGTCCTTATCAATTGTTGAGTTCCCTGTGGTGTCTGACATGGAAGAGGAGATCTTAAGCACACCAATATTTCTTTCTCTCGGTAGCCCTGGCTTCTGTTCTTTGAAAAGTTGGAGCGACCACCCAACGACGGATGATCCATGTACTCGTGCACGTATCAAATTGATGGCATACCATACAGAGGAACCCATATCACAAGAGTACATCGAGTCTTCTCATGGCTTATTGATACCGAACCAGTGGAAACAGGTGTACGAGATATGTGATTCGTCCAGGGAATTGATTTGGCAATGCCTGATCACTGCAATGTCCTTATGAGTATATTCCATGATGTTGGAGCCACCAGAAGTTTATTGTAGAGGCTGGCTTAAGAAAACGGTTTACTTGTAGCACCCTACAATTCCAGTAAATTCTTCAGAGTACAACAGCTTTGCATGGCTTCGAACTTAGGGAGTAGTGCTGCAGGGCATCTTTTGCTTGTGTATTAAGTGGATTTAGAATATGATATTTGAGGAGAAATGATCCCCTGTAGTATCTATGCTGGACTGATCTAATTGAACCTGTCTAAAAGAGTTTCATGTATGAAACAG]
[+] EMBL AU182435             [           AAAAAAAAAAAAAAAATCCAGCGGCGGCGGCGGCGCACATGGATCAGATGGCGGAGCGGCAGCACAAGAAGCGGAAGCCGGAGAAGATGGCCGGCGCGCGCACCAGCGGCCATGATAAGGAGGAGGAGAAGAAGGTGAAGGCTCCTTCTGTGTACCTGGTGGTAGGCCATGAGGTGAGCTGGGCAACCTACTCCGTGTTCAAGGTGGATCCCTACGCGGCGGCGAAGAGAGGCGGCGGCGGCGGCGACNAGGAGGATCCCGCTCCGGTGCCTATCCCTCGCCGGCTCGCCCGCATCAGCGCCAAGTTCTGCATGTCTTTCGCCCCCGTGCCCGTGCGCTCATGGATCGTCGGCGTCGGGGGCGATTCANCGGATGAGGACTACGCCCCGGAGACCATCGTCTTCGACACCGAGACTCGCGCCGTGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL AK099174             [            AAAAAAAAAAAAAAATCCAGCGGCGGCGGCGGCGCACATGGATCAGATGGCGGAGCGGCAGCACAAGAAGCGGAAGCCGGAGAAGATGGCCGGCGCGCGCACCAGCGGCCATGATAAGGAGGAGGAGAAGAAGGTGAAGGCTCCTTCTGTGTACCTGGTGGTAGGCCATGAGGTGAGCTGGGCAACCTACTCCGTGTTCAAGGTGGATCCCTACGCGGCGGCGAAGAGAGGCGGCGGCGGCGGCGACGAGGAGGATCCCGCTCCGGTGCCTATCCCTCGCCGGCTCGCCCGCATCAGCGCCAAGTTCTGCATGTCTTTCGCCCCCGTGCCCGTGCGCTCATGGATCGTCGGCGTCGGGGGCGATTCAGCGGATGAGGACTACGCCCCGGAGACCATCGTCTTCGACACCGAGACTCGCGCCGTGATCCGGGGGCCCAACCTCCTGTCGACCAAGCTCCACCCGGTTGTGCTCACCATCGGCCACAAGATCTACGCCCTGGCACGGTATCCCTCCGTCACGGGGCAACTCGACTTCGTTCCATGGTTCGAGGTGCTTGATCTCTCCCAAGCGCGCGTGGTCGATGGCCATCTAGAGAGCTGCGAGTGGAAGCCCCTGCCACGGCCTCCCTTCTTCCCATGGGACCTCACCCCATTGCAGTACCTTTCTCCGCCAATGGTTACTGTCGAGTCCTACGTTGCACTGGCCTCCTGCATTCTGGTGTCATTATCTCAGCAGGAGGGCACGCACATGTTTGATGTCGACAAGGAGCAATGGTCGAAACTGGATGACAACAGCCTGCCATTCGTCAGAGGCGCCGTTCCACACGGACCCATCTTCCTTGGCTTATCGAGAGCCAAGAAAATCATCACCGCATACAATATCACAGTGGTCTGCCAACCAAGGTCAGGCGGCACAGCGCCGTCCTTATCAATTGTTGAGTTCCCTGTGGTGTCTGACATGGAAGAGGAGATCTTAAGCACACCAATATTTCTTTCTCTCGGTAGCCCTGGCTTCTGTTCTTTGAAAAGTTGGAGCGACCACCCAACGACGGATGATCCATGTACTCGTGCACGTATCAAATTGATGGCATACCATACAGAGGAACCCATATCACAAGAGTACATCGAGTCTTCTCATGGCTTATTGATACCGAACCAGTGGAAACAGGTGTACGAGATATGTGATTCGTCCAGGGAATTGATTTGGCAATGCCTGATCACTGCAATGTCCTTATGAGTATATTCCATGATGTTGGAGCCACCAGAAGTTTATTGTAGAGGCTGGCTTAAGAAAACGGTTTACTTGTAGCACCCTACAATTCCAGTAAATTCTTCAGAGTACAACAGCTTTGCATGGCTTCGAACTTAGGGAGTAGTGCTGCAGGGCATCTTTTGCTTGTGTATTAAGTGGATTTAGAATATGATATTTGAGGAGAAATGATCCCCTGTAGTATCTATGCTGGACTGATCTAATT                                  ]
[+] EMBL CF324551             [                                                                                                                                                                                                                                                                                                                        CAAGTTCTGCATGTCTTTCGCCCCCGTGCCCGTGCGCTCATGGATCGTCGGCGTCGGGGGCGATTCAGCGGATGAGGACTACGCCCCGGAGACCATCGTCTTCGACACCGAGACTCGCGCCGTGATCCGGGGGCCCAACCTCCTGTCGACCAAGCTCCACCCGGTTGTGCTCACCATCGGCCACAAGATCTACGCCCTGGCACGGTATCCCTCCGTCACGGGGCAACTCGACTTCGTTCCATGGTTCGAGGTGCTTGATCTCTCCCAAGCGCGCGTGGTCGATGGCCATCTAGAGAGCTGCGAGTGGAAGCCCCTGCCACGGCCTCCCTTCTTCCCATGGGACCTCACCCCATTGCAGTACCTTTCTCCGCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CF302824             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     GCATCTTTTGCTTGTGTATTAAGTGGATTTAGAATATGATATTTGAGGAGAAATGATCCCCTGTAGTATCTATGCTGGACTGATCTAATTGAACCTGTCTAAAAGAGTTTCAT           ]




>consensus_10402#0
TTTCTCTTCTCAAAAAAAAAAAAAAAATCCAGCGGCGGCGGCGGCGCACATGGATCAGAT
GGCGGAGCGGCAGCACAAGAAGCGGAAGCCGGAGAAGATGGCCGGCGCGCGCACCAGCGG
CCATGATAAGGAGGAGGAGAAGAAGGTGAAGGCTCCTTCTGTGTACCTGGTGGTAGGCCA
TGAGGTGAGCTGGGCAACCTACTCCGTGTTCAAGGTGGATCCCTACGCGGCGGCGAAGAG
AGGCGGCGGCGGCGGCGACGAGGAGGATCCCGCTCCGGTGCCTATCCCTCGCCGGCTCGC
CCGCATCAGCGCCAAGTTCTGCATGTCTTTCGCCCCCGTGCCCGTGCGCTCATGGATCGT
CGGCGTCGGGGGCGATTCAGCGGATGAGGACTACGCCCCGGAGACCATCGTCTTCGACAC
CGAGACTCGCGCCGTGATCCGGGGGCCCAACCTCCTGTCGACCAAGCTCCACCCGGTTGT
GCTCACCATCGGCCACAAGATCTACGCCCTGGCACGGTATCCCTCCGTCACGGGGCAACT
CGACTTCGTTCCATGGTTCGAGGTGCTTGATCTCTCCCAAGCGCGCGTGGTCGATGGCCA
TCTAGAGAGCTGCGAGTGGAAGCCCCTGCCACGGCCTCCCTTCTTCCCATGGGACCTCAC
CCCATTGCAGTACCTTTCTCCGCCAATGGTTACTGTCGAGTCCTACGTTGCACTGGCCTC
CTGCATTCTGGTGTCATTATCTCAGCAGGAGGGCACGCACATGTTTGATGTCGACAAGGA
GCAATGGTCGAAACTGGATGACAACAGCCTGCCATTCGTCAGAGGCGCCGTTCCACACGG
ACCCATCTTCCTTGGCTTATCGAGAGCCAAGAAAATCATCACCGCATACAATATCACAGT
GGTCTGCCAACCAAGGTCAGGCGGCACAGCGCCGTCCTTATCAATTGTTGAGTTCCCTGT
GGTGTCTGACATGGAAGAGGAGATCTTAAGCACACCAATATTTCTTTCTCTCGGTAGCCC
TGGCTTCTGTTCTTTGAAAAGTTGGAGCGACCACCCAACGACGGATGATCCATGTACTCG
TGCACGTATCAAATTGATGGCATACCATACAGAGGAACCCATATCACAAGAGTACATCGA
GTCTTCTCATGGCTTATTGATACCGAACCAGTGGAAACAGGTGTACGAGATATGTGATTC
GTCCAGGGAATTGATTTGGCAATGCCTGATCACTGCAATGTCCTTATGAGTATATTCCAT
GATGTTGGAGCCACCAGAAGTTTATTGTAGAGGCTGGCTTAAGAAAACGGTTTACTTGTA
GCACCCTACAATTCCAGTAAATTCTTCAGAGTACAACAGCTTTGCATGGCTTCGAACTTA
GGGAGTAGTGCTGCAGGGCATCTTTTGCTTGTGTATTAAGTGGATTTAGAATATGATATT
TGAGGAGAAATGATCCCCTGTAGTATCTATGCTGGACTGATCTAATTGAACCTGTCTAAA
AGAGTTTCATGTATGAAACAG

consensusID : consensus_10402#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 836
fasta sequence 
                              [GTTTGTATTGAAGCTGCTTGTATTAGCTGTAGTATGTTATACATGTTGCCTATTTATGCAGTTAATCGTTTGGAACCCACTCATTAAGTATGCCGTCTTTTTTGGAAGTACTTTGTTCAATGTGCAGGGAAAATGTTGTGAGAGCTTTGTTGATTGAACAACTGTCATTATTATGCTATTTCGTCTATAGAAACATGTTTTTTGGGCATTTCACTATTAGTTCATCGGTTAAAAAAACTCATACAACATTATTGGGCAAGCATATGCTTCCTATAATCTTTATCAGATTGCCAATATCATTGTTTGTTCTGTTGTGGCCTTCCCTGAATATGGTATGTTGGGTAATTACAGGTGTATAATCTTACGAACACTACAAAGTAATGTGAGTTTGTTTGTGTTAATCACATTCCACATGTATACTGCCTTAATGTAGCTCATTTTTTGGGTTTACCCGTTTACTGGTAGCAGTTTTAATATTTCCTCTATTTTACATATAATTCTCAATATTTTATGGTTCCACAGGTATATTCCATGATGTTGGAGCCACCAGAAGTTTATTGTAGAGGCTGGCTTAAGAAAACGGTTTACTTGTAGCACCCTACAATTCCAGTAAATTCTTCAGAGTACAACACCTTTGCATGGCTTCGATCTTAGGGAGTAGTGCTGCAGGGCATCTTTTGCTTGTGTATTAAGTGGATTTAGAATATGATATTTGAGGAGAAATGATCCCCTGTAGTATCCTATGCTGGACTGATCTAATTGAACCTGTCTAAAAGAGCTTCACGTATGAAACAGCTGTACGTATATCTGAGTGTGACGTTTAATCAAAAAAAAGG]

[-] EMBL CB668087             [GTTTGTATTGAAGCTGCTTGTATTAGCTGTAGTATGTTATACATGTTGCCTATTTATGCAGTTAATCGTTTGGAACCCACTCATTAAGTATGCCGTCTTTTTTGGAAGTACTTTGTTCAATGTGCAGGGAAAATGTTGTGAGAGCTTTGTTGATTGAACAACTGTCATTATTATGCTATTTCGTCTATAGAAACATGTTTTTTGGGCATTTCACTATTAGTTCATCGGTTAAAAAAACTCATACAACATTATTGGGCAAGCATATGCTTCCTATAATCTTTATCAGATTGCCAATATCATTGTTTGTTCTGTTGTGGCCTTCCCTGAATATGGTATGTTGGGTAATTACAGGTGTATAATCTTACGAACACTACAAAGTAATGTGAGTTTGTTTGTGTTAATCACATTCCACATGTATACTGCCTTAATGTAGCTCATTTTTTGGGTTTACCCGTTTACTGGTAGCAGTTTTAATATTTCCTCTATTTTACATATAATTCTCAATATTTTATGGTTCCACAGGTATATTCCATGATGTTGGAGCCACCAGAAGTTTATTGTAGAGGCTGGCTTAAGAAAACGGTTTACTTGTAGCACCCTACAATTCCAGTAAATTCTTCAGAGTACAACACCTTTGCATGGCTTCGATCTTAGGGAGTAGTGCTGCAGGGCATCTTTTGCTTGTGTATTAAGTGGATTTAGAATATGATATTTGAGGAGAAATGATCCCCTGTAGTATCCTATGCTGGACTGATCTAATTGAACCTGTCTAAAAGAGCTTCACGTATGAAACAGCTGTACGTATATCTGAGTGTGACGTTTAATCAAAAAAAAGG]




>consensus_10402#1
GTTTGTATTGAAGCTGCTTGTATTAGCTGTAGTATGTTATACATGTTGCCTATTTATGCA
GTTAATCGTTTGGAACCCACTCATTAAGTATGCCGTCTTTTTTGGAAGTACTTTGTTCAA
TGTGCAGGGAAAATGTTGTGAGAGCTTTGTTGATTGAACAACTGTCATTATTATGCTATT
TCGTCTATAGAAACATGTTTTTTGGGCATTTCACTATTAGTTCATCGGTTAAAAAAACTC
ATACAACATTATTGGGCAAGCATATGCTTCCTATAATCTTTATCAGATTGCCAATATCAT
TGTTTGTTCTGTTGTGGCCTTCCCTGAATATGGTATGTTGGGTAATTACAGGTGTATAAT
CTTACGAACACTACAAAGTAATGTGAGTTTGTTTGTGTTAATCACATTCCACATGTATAC
TGCCTTAATGTAGCTCATTTTTTGGGTTTACCCGTTTACTGGTAGCAGTTTTAATATTTC
CTCTATTTTACATATAATTCTCAATATTTTATGGTTCCACAGGTATATTCCATGATGTTG
GAGCCACCAGAAGTTTATTGTAGAGGCTGGCTTAAGAAAACGGTTTACTTGTAGCACCCT
ACAATTCCAGTAAATTCTTCAGAGTACAACACCTTTGCATGGCTTCGATCTTAGGGAGTA
GTGCTGCAGGGCATCTTTTGCTTGTGTATTAAGTGGATTTAGAATATGATATTTGAGGAG
AAATGATCCCCTGTAGTATCCTATGCTGGACTGATCTAATTGAACCTGTCTAAAAGAGCT
TCACGTATGAAACAGCTGTACGTATATCTGAGTGTGACGTTTAATCAAAAAAAAGG

consensusID : consensus_10402#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 818
fasta sequence 
                              [GTCTGCCAACCAAGGTCAGGCGGCACAGCGCCGTCCTTATCAATTGTTGAGTTCCCTGTGGTGTCTGACATGGAAGAGGAGATCTTAAGCACACCAATATTTCTTTCTCTCGGTAGCCCTGGCTTCTGTTCTTTGAAAAGTTGGAGCGACCACCCAACGACGGATGATCCATGTACTCGTGCACGTATCAAATTGATGGCATACCATACAGAGGAACCCATATCACAAGAGTACATCGAGTCTTCTCATGGCTTATTGATACCGAACCAGTGGAAACAGGTGTACGAGATATGTGATTCGTCCAGGGAATTGATTTGGCAATGCCTGATCACTGCAATGTCCTTATGAGTAAGCCCCTTTGTCACATCTAGTCCCTGGAGTCAATGGATTGTGGATTTCATTTGATTTCTTGCACTGCCTGTTTATTTACAACTGCAACCATAAAGCATCTATAAGATGACATTACTGCTAATCATGGATTAACACCTTAGCACGGTACTGCTACAATGTATGTCAGGATTGTTGGTTCGGGGTGTGTATGTTTGACATTGCTATGCCTGTTATTGATTTGCGATAGTGACCACATAGACCTTGTCTTCATAATACTGAAGATAAATATCAATACTGGCTTTAGTTTATATAAGACGACATAAATTGCCCAGAGCTGTCTTTTTTTTTTTTTGATTTTTAGTTTTTTTAGGAAGCTTCTCATATGTTAGTTCTGTAAAGGTACTCGATTTAAGATTTGTATCTACAAAAAGCAACAATCTACAACAGCAACAGTATATTTGTTTGCTGTTAATTAGTTTGAGAAATAT]

[+] EMBL CB668086             [GTCTGCCAACCAAGGTCAGGCGGCACAGCGCCGTCCTTATCAATTGTTGAGTTCCCTGTGGTGTCTGACATGGAAGAGGAGATCTTAAGCACACCAATATTTCTTTCTCTCGGTAGCCCTGGCTTCTGTTCTTTGAAAAGTTGGAGCGACCACCCAACGACGGATGATCCATGTACTCGTGCACGTATCAAATTGATGGCATACCATACAGAGGAACCCATATCACAAGAGTACATCGAGTCTTCTCATGGCTTATTGATACCGAACCAGTGGAAACAGGTGTACGAGATATGTGATTCGTCCAGGGAATTGATTTGGCAATGCCTGATCACTGCAATGTCCTTATGAGTAAGCCCCTTTGTCACATCTAGTCCCTGGAGTCAATGGATTGTGGATTTCATTTGATTTCTTGCACTGCCTGTTTATTTACAACTGCAACCATAAAGCATCTATAAGATGACATTACTGCTAATCATGGATTAACACCTTAGCACGGTACTGCTACAATGTATGTCAGGATTGTTGGTTCGGGGTGTGTATGTTTGACATTGCTATGCCTGTTATTGATTTGCGATAGTGACCACATAGACCTTGTCTTCATAATACTGAAGATAAATATCAATACTGGCTTTAGTTTATATAAGACGACATAAATTGCCCAGAGCTGTCTTTTTTTTTTTTTGATTTTTAGTTTTTTTAGGAAGCTTCTCATATGTTAGTTCTGTAAAGGTACTCGATTTAAGATTTGTATCTACAAAAAGCAACAATCTACAACAGCAACAGTATATTTGTTTGCTGTTAATTAGTTTGAGAAATAT]




>consensus_10402#2
GTCTGCCAACCAAGGTCAGGCGGCACAGCGCCGTCCTTATCAATTGTTGAGTTCCCTGTG
GTGTCTGACATGGAAGAGGAGATCTTAAGCACACCAATATTTCTTTCTCTCGGTAGCCCT
GGCTTCTGTTCTTTGAAAAGTTGGAGCGACCACCCAACGACGGATGATCCATGTACTCGT
GCACGTATCAAATTGATGGCATACCATACAGAGGAACCCATATCACAAGAGTACATCGAG
TCTTCTCATGGCTTATTGATACCGAACCAGTGGAAACAGGTGTACGAGATATGTGATTCG
TCCAGGGAATTGATTTGGCAATGCCTGATCACTGCAATGTCCTTATGAGTAAGCCCCTTT
GTCACATCTAGTCCCTGGAGTCAATGGATTGTGGATTTCATTTGATTTCTTGCACTGCCT
GTTTATTTACAACTGCAACCATAAAGCATCTATAAGATGACATTACTGCTAATCATGGAT
TAACACCTTAGCACGGTACTGCTACAATGTATGTCAGGATTGTTGGTTCGGGGTGTGTAT
GTTTGACATTGCTATGCCTGTTATTGATTTGCGATAGTGACCACATAGACCTTGTCTTCA
TAATACTGAAGATAAATATCAATACTGGCTTTAGTTTATATAAGACGACATAAATTGCCC
AGAGCTGTCTTTTTTTTTTTTTGATTTTTAGTTTTTTTAGGAAGCTTCTCATATGTTAGT
TCTGTAAAGGTACTCGATTTAAGATTTGTATCTACAAAAAGCAACAATCTACAACAGCAA
CAGTATATTTGTTTGCTGTTAATTAGTTTGAGAAATAT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10402#0      TTTCTCTTCTCAAAAAAAAAAAAAAAATCCAGCGGCGGCGGCGGCGCACATGGATCAGAT 60
consensus_10402#2      ------------------------------------------------------------
consensus_10402#1      ------------------------------------------------------------
                                                                                   

consensus_10402#0      GGCGGAGCGGCAGCACAAGAAGCGGAAGCCGGAGAAGATGGCCGGCGCGCGCACCAGCGG 120
consensus_10402#2      ------------------------------------------------------------
consensus_10402#1      ------------------------------------------------------------
                                                                                   

consensus_10402#0      CCATGATAAGGAGGAGGAGAAGAAGGTGAAGGCTCCTTCTGTGTACCTGGTGGTAGGCCA 180
consensus_10402#2      ------------------------------------------------------------
consensus_10402#1      ------------------------------------------------------------
                                                                                   

consensus_10402#0      TGAGGTGAGCTGGGCAACCTACTCCGTGTTCAAGGTGGATCCCTACGCGGCGGCGAAGAG 240
consensus_10402#2      ------------------------------------------------------------
consensus_10402#1      ------------------------------------------------------------
                                                                                   

consensus_10402#0      AGGCGGCGGCGGCGGCGACGAGGAGGATCCCGCTCCGGTGCCTATCCCTCGCCGGCTCGC 300
consensus_10402#2      ------------------------------------------------------------
consensus_10402#1      ------------------------------------------------------------
                                                                                   

consensus_10402#0      CCGCATCAGCGCCAAGTTCTGCATGTCTTTCGCCCCCGTGCCCGTGCGCTCATGGATCGT 360
consensus_10402#2      ------------------------------------------------------------
consensus_10402#1      ------------------------------------------------------------
                                                                                   

consensus_10402#0      CGGCGTCGGGGGCGATTCAGCGGATGAGGACTACGCCCCGGAGACCATCGTCTTCGACAC 420
consensus_10402#2      ------------------------------------------------------------
consensus_10402#1      ------------------------------------------------------------
                                                                                   

consensus_10402#0      CGAGACTCGCGCCGTGATCCGGGGGCCCAACCTCCTGTCGACCAAGCTCCACCCGGTTGT 480
consensus_10402#2      ------------------------------------------------------------
consensus_10402#1      ------------------------------------------------------------
                                                                                   

consensus_10402#0      GCTCACCATCGGCCACAAGATCTACGCCCTGGCACGGTATCCCTCCGTCACGGGGCAACT 540
consensus_10402#2      ------------------------------------------------------------
consensus_10402#1      ------------------------------------------------------------
                                                                                   

consensus_10402#0      CGACTTCGTTCCATGGTTCGAGGTGCTTGATCTCTCCCAAGCGCGCGTGGTCGATGGCCA 600
consensus_10402#2      ------------------------------------------------------------
consensus_10402#1      ------------------------------------------------------------
                                                                                   

consensus_10402#0      TCTAGAGAGCTGCGAGTGGAAGCCCCTGCCACGGCCTCCCTTCTTCCCATGGGACCTCAC 660
consensus_10402#2      ------------------------------------------------------------
consensus_10402#1      ------------------------------------------------------------
                                                                                   

consensus_10402#0      CCCATTGCAGTACCTTTCTCCGCCAATGGTTACTGTCGAGTCCTACGTTGCACTGGCCTC 720
consensus_10402#2      ------------------------------------------------------------
consensus_10402#1      ------------------------------------------------------------
                                                                                   

consensus_10402#0      CTGCATTCTGGTGTCATTATCTCAGCAGGAGGGCACGCACATGTTTGATGTCGACAAGGA 780
consensus_10402#2      ------------------------------------------------------------
consensus_10402#1      ---------------GTTTGTATTGAAGCTGCTTGTATTAGCTGTAGTATGTTATACATG 45
                                                                                   

consensus_10402#0      GCAATGGTCGAAACTGGATGACAACAGCCTGCCATTCGTCAGAGGCGCCGTTCCACACGG 840
consensus_10402#2      ------------------------------------------------------------
consensus_10402#1      TTGCCTATTTATGCAGTTAATCGTTTGGAACCCACTCATTAAGTATGCCGTCTTTTTTGG 105
                                                                                   

consensus_10402#0      ACCCATCTTCCTTGGCTTATCGAGAGCCAAGAAAATCATCACCGCATACAATATCACAGT 900
consensus_10402#2      ------------------------------------------------------------
consensus_10402#1      AAGTACTTTGTTCAATGTGCAGGGAAAATGTTGTGAGAGCTTTGTTGATTGAACAACTGT 165
                                                                                   

consensus_10402#0      GGTCTGCCAACCAAGGTCAGGCGGCACAGCGCCGTCCTTATCAATTGTTGAGTT--CCCT 958
consensus_10402#2      -GTCTGCCAACCAAGGTCAGGCGGCACAGCGCCGTCCTTATCAATTGTTGAGTT--CCCT 57
consensus_10402#1      CAT-TATTATGCTATTTCGTCTATAGAAACATGTTTTTTGGGCATTTCACTATTAGTTCA 224
                         * *   *  * *  **         * *    *  **    ***      **    * 

consensus_10402#0      GTGGTGTCTGACATGGAAGAGGAGATCTTAAGCACACCAATATTTCTTTC--TCTCGGTA 1016
consensus_10402#2      GTGGTGTCTGACATGGAAGAGGAGATCTTAAGCACACCAATATTTCTTTC--TCTCGGTA 115
consensus_10402#1      TCGGTTAAAAAAACTCATACAACATTATTGGGCAAGCATATGCTTCCTATAATCTTTATC 284
                         ***     * *   *        * **  ***  *  **  *** *    ***   * 

consensus_10402#0      GCCCTGGC--TTCTGTTCTTTGAAAAGTTGGAGCGACCACCCAACGACGGATGATCCATG 1074
consensus_10402#2      GCCCTGGC--TTCTGTTCTTTGAAAAGTTGGAGCGACCACCCAACGACGGATGATCCATG 173
consensus_10402#1      AGATTGCCAATATCATTGTTTGTTCTGTTGTGGCCTTCCCTGAATATGGTATGTT--GGG 342
                           ** *  *    ** ****    ****  **   * *  **    * *** *    *

consensus_10402#0      TACTCGTGCACGTATCAAATTGATGGCA-TACCATACAGAG-GAACCCATATCACAAGAG 1132
consensus_10402#2      TACTCGTGCACGTATCAAATTGATGGCA-TACCATACAGAG-GAACCCATATCACAAGAG 231
consensus_10402#1      TAATTACAGGTGTATAATCTTACGAACACTACAAAGTAATGTGAGTTTGTTTGTGTTAAT 402
                       ** *       **** *  **     ** *** *   *  * **     * *      * 

consensus_10402#0      TACATCGAGTCTTCTCA-TGGCTTATTGATACCGAACCAGTGGAAACAGGTGTACGAGAT 1191
consensus_10402#2      TACATCGAGTCTTCTCA-TGGCTTATTGATACCGAACCAGTGGAAACAGGTGTACGAGAT 290
consensus_10402#1      CACATTCCACATGTATACTGCCTTAATGTAGCTCATTTTTTGGGTTTACCCGTTTACTGG 462
                        ****      *    * ** **** **   *  *     ***    *   **       

consensus_10402#0      ATGTGATTCGTCCAGGGAATTGATTTGGCAATGCCTGATCACTGCA--ATGTCCTTATGA 1249
consensus_10402#2      ATGTGATTCGTCCAGGGAATTGATTTGGCAATGCCTGATCACTGCA--ATGTCCTTATGA 348
consensus_10402#1      TAGCAGTTTTAATATTTCCTCTATTTTACATATAATTCTCAATATTTTATGGTTCCACAG 522
                         *   **     *     *  ****  **     *  *** *     ***     *   

consensus_10402#0      GTATATTCCATGATGTTGG--AGCCACCAGA---AGTTTATTGTAGAG---GCTGGCTTA 1301
consensus_10402#2      GTAAGCCCCTTTGTCACATCTAGTCCCTGGAGTCAATGGATTGTGGATTTCATTTGATTT 408
consensus_10402#1      GTATATTCCATGATGTTGG--AGCCACCAGA---AGTTTATTGTAGAG---GCTGGCTTA 574
                       ***    ** *  *       ** * *  **   * *  ***** **      * * ** 

consensus_10402#0      AGAAAACGGTTTACTTGTAGCACCCTACAATTCCAGTAAATTCTTCAGAGTACA--ACAG 1359
consensus_10402#2      CTTGCACTGCCTGTTTATTTACAACTGCAACCATAAAGCATCTATAAGATGACATTACTG 468
consensus_10402#1      AGAAAACGGTTTACTTGTAGCACCCTACAATTCCAGTAAATTCTTCAGAGTACA--ACAC 632
                            ** *  *  ** *      ** ***    *    **   * ***  ***  **  

consensus_10402#0      CTTTGCATGGCTTCGAACTTAGGGA--GTAGTGCTGCAGGGCATCTTTTGCTTGTGTATT 1417
consensus_10402#2      CTAATCATGGATTAACACCTTAGCACGGTACTGCTACAATGTATGTCAGGATTGTTGGTT 528
consensus_10402#1      CTTTGCATGGCTTCGATCTTAGGGA--GTAGTGCTGCAGGGCATCTTTTGCTTGTGTATT 690
                       **   ***** **    * *  * *  *** **** **  * ** *   * ****   **

consensus_10402#0      AAGTGGATTTAGAATATGATATT----TGAGGAGAAATGATCCCCTGTAGTATCT-ATGC 1472
consensus_10402#2      CGGGGTGTGTATG-TTTGACATTGCTATGCCTGTTATTGATTTGCGATAGTGACC-ACAT 586
consensus_10402#1      AAGTGGATTTAGAATATGATATT----TGAGGAGAAATGATCCCCTGTAGTATCCTATGC 746
                         * *  * **   * *** ***    **      * ****   *  ****  *  *   

consensus_10402#0      TGGACTGATCTAATTGAACCTG----------TCTAAAAGAGTTTCA---TGTATGAAAC 1519
consensus_10402#2      AGACCTTGTCTTCATAATACTGAAGATAAATATCAATACTGGCTTTAGTTTATATAAGAC 646
consensus_10402#1      TGGACTGATCTAATTGAACCTG----------TCTAAAAGAGCTTCA---CGTATGAAAC 793
                        *  **  ***   * *  ***          ** * *   * ** *     *** * **

consensus_10402#0      AG---------------------------------------------------------- 1521
consensus_10402#2      GACATAAATTGCCCAGAGCTGTCTTTTTTTTTTTTTGATTTTTAGTTTTTTTAGGAAGCT 706
consensus_10402#1      AGCTGTACGTATATCTGAGTGTGACGTTTAATCAAAAAAAAGG----------------- 836
                                                                                   

consensus_10402#0      ------------------------------------------------------------
consensus_10402#2      TCTCATATGTTAGTTCTGTAAAGGTACTCGATTTAAGATTTGTATCTACAAAAAGCAACA 766
consensus_10402#1      ------------------------------------------------------------
                                                                                   

consensus_10402#0      ----------------------------------------------------
consensus_10402#2      ATCTACAACAGCAACAGTATATTTGTTTGCTGTTAATTAGTTTGAGAAATAT 818
consensus_10402#1      ----------------------------------------------------


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)