|
These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10964#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 3259 fasta sequence
[CCAAACCGGCCATTTCCGCTTCCCTATTCCGCCCCCCTTCCTCCGCTCCCAACCGAGTCCCCGGCGCCGCCGCCGGCTACATCCTCGCCCTGCGTCGAGGGCCACGGCGCCGCGCCCACCGCCCGTCGCAGCGCCCCCGCTGCTCGGCCACGGCTCGCACGACCGCGCGGGTGAGAGAACAGCCGGCGCTGCCTTGGCCTCGGCTCGGCGGCGCGACGCCCCCACCCACTCCAGGCTCCACGTGAGGAATTTTTAATGCTTGAAATGACTGAAAGTTGGATAGAAGGCTCAAAAAACACTTCAGCTCCAGAATCAGTTTCTTGTTCAGTTTCTAGATATGAATCATCACCGCCAAGAAGACTGGGGAAAAGAAATATTTATCATCTATTAGCTCAACGGGAGATCTCTCCTCGGACAAAACACCAAGCTAAAAATATTTGGTCTGGATCTCCAGAATGTGCTACTGGTTCAATTGAGTTAGCATTTTGGGTTACAGATGCTAGACATGATCTTTTTTCTTGGGCTGAATCACAATCCTTGCATCGGTGGTCTGCCAGGTATTGTCTTCTCCTGCCTGCTCCAAGGTCAACCATTGCAGCTGCATTCAGTCCGGATGGGAGAACACTTGCATCCACACATGGTGACCATACTGTTAAAATAATCGATTGCCAAACTGGGAAATGTTTGAAAGTGTTGCTTGGACATTGGCGCACTCCATGGGTGGTTAGATATCATCCATTACATCCTGATATCGTTGCTAGCGGAAGTTTGGATAATGAAGTTTG-TCTATGGGATGCTAAAACCTCCCGTTGCATTGGATCACACTTCTTCTATAAGCAAATTGCATCAATTGCATTTCATGCAAAGGGGGAGCTTCTGGCGGTTGCTTCAGGGCACAAACTGTTCATATGGGACTACAATAAACGAGATGAAGCTTCTGACCCACCAATGATATTAAGAACTCGCCGTTCACTGAGAGCTGTTCAATTTCATCCCAATGGGGCTCCGTATCTACTGACTGCAGAGGTTAACAATCTTGATTCTGCTGATTCAGAACTGACCCATGCAACATCTTCTGGCTATTCAAACTCGCCTTCGGCTGTATTTTTTGCAATCATGAACTCCGCATGTTGTCCATACTCTGAGTCTAGGTTTTCATCACCGTGCTTGATCTGGCCTGCATATGTCAGAGATGATGGAAGCATATGTCTGCTTCGCAATGACTGGGTTAGTGGTTCATCCGATGTGCAGCAGCCATCAGATTCTGAAACTCAACAGGCTGGCCATATGGTTACACCTATGGATGTATGCCCTGGAGAACCTGGGGTGAATAATTATGATGATGAAGATTCTGCATCTTTATCAAATAGAATAGAAATGCATACTCCCAGTTGGCAGAATAGCTCAAGATTTCACAACAGTAGTGCTGCTACTGATCTTCACAGGATTGATATAAGACAAGTTTCTGACCTGAGCAGTGATACGCCAAATCCAGAAATGCCTGCACATTCAAGAATTGATGTTCCAAATAGTATGCCAATGGATTTGTTCGCCTTTTCAAATACAATAGATGTTCAAATGTTCCTAAGAGACGTAGAGGCCGGACATCACCATAATAATTACACTGGTGGATCACATAGCTGGGAACTGCCTTTTCTCCAGGGTTGGTTGATGGCACAAAACCGTACAGGATTGCGTGCAACACTTCCTAACAATGAGGTTATAGGAGACTTACCTATCGGTGGCACTGCTGGGACTGATAATGTGATGAATGAATCATCAAACATGTACAGTTTTGAACGTGTAGGGCCTTCATCATCAATTCCAATTACTACGGACAGTTTGAGAGGGCTAAGTAAACATCGTCATATGCTGGCCTCTGTACCTGGTGGAGCAGGGACTTCGCTTCAAGGTGCTCAAAATGGTGAAGCTCATGTTAATGTTGTCTCATTAGGTGTTGGGTCAGAATTTGCTACGTCACTGTTTGCTGGTGACGGTACTGAATTACCCTGTACAGTGAAACTTAGAATATGGCGGCATAACATTGACAACCCTTGTGCTGTGTTAGCACCTGAGGCATGCTGCTTGACAATCTCTCATGCTGTTCTTTGCAGTGAAATGGGCACCCATTTTTCCCCCTGTGGGCGTTTTTTGGTGGCTTGTGTTGCATGCTTACTGCCTCAAACAGAAGTTGGTGAGCATGTAAGCCAATCGCCTGTACAGTATGATTCAACTGGGGCTGGAACATCACCAACTCGCCACCCTCTCCCCTCTCGTCGAGTTATTTATGAGCTTCGTGTTTATTCTCTTGAGGAGGAAACGTTTGGGACAGTTCTTGTGTCCCGGGCAATAAGGGCAGCCCATTGCTTAACTTCCATTCAGTTTTCACCTACATCAGAGCACATACTACTGGCATATGGTCGTCGTCATAACTCACTTCTGAGGGGCATTTTCATGGATGGCAAGACCACAATCCCTGTGTACACTGTCTTGGAGGTGTATAGAGTTTCAGACATGGAGCTTGTAAGAGTTATCCCTAGTGCTGAAGATGAAGTCAATGTCGCATGTTTTCATCCTTCCCCTGGTGCAGGTCTTGTTTATGGGACTAAGGAAGGAAAGCTCAGGATAATTCAACA-CAATGTTGCAGACTACTAGGGGAAATATTCTTGAGGAACTTATCTCCACAGATTCATATGCCCAATGAATCATATCCCATCCCAGCTAAATCATGGTGGTCAATTTTGAAGGACCAACATGCAGATGTTCGCCTTCCTGAGTAATCCACAACATGATTGCA-CTGAGACTCCGGAAAACATTTTGTGACGATCA-TGAAGACTTCGCTCTGCACCTAGGTAACAGTGACGCGGGTAAGAACTAAGAAGCAAGCTGTGAGAGAACAGTCAAGGAAACCGCTCCCGGTGGCAGCATATGTGACTAAGTTAGTGGTTGACTAATTTCATTGCTAGAGGTAGAGCAGGAGGATGCTGGTGTATTGATGCTGCCTTAGCCAGAAAATGGGGTAGCAGATGAAATCTAGCAATTGGCATACATGTCAATGTGTCATGTTGCTCTGCATGACGTTGTCCTAATGGACTGTAACAATGGGATGTTGCTGCAATCAGAAGCACATACGCTCTTATTAACATGATTTGCTGTTATGCAAATCTTTTTTCTGCCGGTATATGGACTGGGGTTGGTGTATGTTGGGCAAATGAATCCC-AAACCA-CATTAGTAAATGCGAGAAAATGGGTATCAAAAA]
[+] EMBL AK072913 [CCAAACCGGCCATTTCCGCTTCCCTATTCCGCCCCCCTTCCTCCGCTCCCAACCGAGTCCCCGGCGCCGCCGCCGGCTACATCCTCGCCCTGCGTCGAGGGCCACGGCGCCGCGCCCACCGCCCGTCGCAGCGCCCCCGCTGCTCGGCCACGGCTCGCACGACCGCGCGGGTGAGAGAACAGCCGGCGCTGCCTTGGCCTCGGCTCGGCGGCGCGACGCCCCCACCCACTCCAGGCTCCACGTGAGGAATTTTTAATGCTTGAAATGACTGAAAGTTGGATAGAAGGCTCAAAAAACACTTCAGCTCCAGAATCAGTTTCTTGTTCAGTTTCTAGATATGAATCATCACCGCCAAGAAGACTGGGGAAAAGAAATATTTATCATCTATTAGCTCAACGGGAGATCTCTCCTCGGACAAAACACCAAGCTAAAAATATTTGGTCTGGATCTCCAGAATGTGCTACTGGTTCAATTGAGTTAGCATTTTGGGTTACAGATGCTAGACATGATCTTTTTTCTTGGGCTGAATCACAATCCTTGCATCGGTGGTCTGCCAGGTATTGTCTTCTCCTGCCTGCTCCAAGGTCAACCATTGCAGCTGCATTCAGTCCGGATGGGAGAACACTTGCATCCACACATGGTGACCATACTGTTAAAATAATCGATTGCCAAACTGGGAAATGTTTGAAAGTGTTGCTTGGACATTGGCGCACTCCATGGGTGGTTAGATATCATCCATTACATCCTGATATCGTTGCTAGCGGAAGTTTGGATAATGAAGTTTG TCTATGGGATGCTAAAACCTCCCGTTGCATTGGATCACACTTCTTCTATAAGCAAATTGCATCAATTGCATTTCATGCAAAGGGGGAGCTTCTGGCGGTTGCTTCAGGGCACAAACTGTTCATATGGGACTACAATAAACGAGATGAAGCTTCTGACCCACCAATGATATTAAGAACTCGCCGTTCACTGAGAGCTGTTCAATTTCATCCCAATGGGGCTCCGTATCTACTGACTGCAGAGGTTAACAATCTTGATTCTGCTGATTCAGAACTGACCCATGCAACATCTTCTGGCTATTCAAACTCGCCTTCGGCTGTATTTTTTGCAATCATGAACTCCGCATGTTGTCCATACTCTGAGTCTAGGTTTTCATCACCGTGCTTGATCTGGCCTGCATATGTCAGAGATGATGGAAGCATATGTCTGCTTCGCAATGACTGGGTTAGTGGTTCATCCGATGTGCAGCAGCCATCAGATTCTGAAACTCAACAGGCTGGCCATATGGTTACACCTATGGATGTATGCCCTGGAGAACCTGGGGTGAATAATTATGATGATGAAGATTCTGCATCTTTATCAAATAGAATAGAAATGCATACTCCCAGTTGGCAGAATAGCTCAAGATTTCACAACAGTAGTGCTGCTACTGATCTTCACAGGATTGATATAAGACAAGTTTCTGACCTGAGCAGTGATACGCCAAATCCAGAAATGCCTGCACATTCAAGAATTGATGTTCCAAATAGTATGCCAATGGATTTGTTCGCCTTTTCAAATACAATAGATGTTCAAATGTTCCTAAGAGACGTAGAGGCCGGACATCACCATAATAATTACACTGGTGGATCACATAGCTGGGAACTGCCTTTTCTCCAGGGTTGGTTGATGGCACAAAACCGTACAGGATTGCGTGCAACACTTCCTAACAATGAGGTTATAGGAGACTTACCTATCGGTGGCACTGCTGGGACTGATAATGTGATGAATGAATCATCAAACATGTACAGTTTTGAACGTGTAGGGCCTTCATCATCAATTCCAATTACTACGGACAGTTTGAGAGGGCTAAGTAAACATCGTCATATGCTGGCCTCTGTACCTGGTGGAGCAGGGACTTCGCTTCAAGGTGCTCAAAATGGTGAAGCTCATGTTAATGTTGTCTCATTAGGTGTTGGGTCAGAATTTGCTACGTCACTGTTTGCTGGTGACGGTACTGAATTACCCTGTACAGTGAAACTTAGAATATGGCGGCATAACATTGACAACCCTTGTGCTGTGTTAGCACCTGAGGCATGCTGCTTGACAATCTCTCATGCTGTTCTTTGCAGTGAAATGGGCACCCATTTTTCCCCCTGTGGGCGTTTTTTGGTGGCTTGTGTTGCATGCTTACTGCCTCAAACAGAAGTTGGTGAGCATGTAAGCCAATCGCCTGTACAGTATGATTCAACTGGGGCTGGAACATCACCAACTCGCCACCCTCTCCCCTCTCGTCGAGTTATTTATGAGCTTCGTGTTTATTCTCTTGAGGAGGAAACGTTTGGGACAGTTCTTGTGTCCCGGGCAATAAGGGCAGCCCATTGCTTAACTTCCATTCAGTTTTCACCTACATCAGAGCACATACTACTGGCATATGGTCGTCGTCATAACTCACTTCTGAGGGGCATTTTCATGGATGGCAAGACCACAATCCCTGTGTACACTGTCTTGGAGGTGTATAGAGTTTCAGACATGGAGCTTGTAAGAGTTATCCCTAGTGCTGAAGATGAAGTCAATGTCGCATGTTTTCATCCTTCCCCTGGTGCAGGTCTTGTTTATGGGACTAAGGAAGGAAAGCTCAGGATAATTCAACA CAATGTTGCAGACTACTAGGGGAAATATTCTTGAGGAACTTATCTCCACAGATTCATATGCCCAATGAATCATATCCCATCCCAGCTAAATCATGGTGGTCAATTTTGAAGGACCAACATGCAGATGTTCGCCTTCCTGAGTAATCCACAACATGATTGCA CTGAGACTCCGGAAAACATTTTGTGACGATCA TGAAGACTTCGCTCTGCACCTAGGTAACAGTGACGCGGGTAAGAACTAAGAAGCAAGCTGTGAGAGAACAGTCAAGGAAACCGCTCCCGGTGGCAGCATATGTGACTAAGTTAGTGGTTGACTAATTTCATTGCTAGAGGTAGAGCAGGAGGATGCTGGTGTATTGATGCTGCCTTAGCCAGAAAATGGGGTAGCAGATGAAATCTAGCAATTGGCATACATGTCAATGTGTCATGTTGCTCTGCATGACGTTGTCCTAATGGACTGTAACAATGGGATGTTGCTGCAATCAGAAGCACATACGCTCTTATTAACATGATTTGCTGTTATGCAAATCTTTTTTCTGCCGGTATATGGACTGGGGTTGGT ]
[+] EMBL CF306884 [ GCCTTGGCCTCGGCTCGGCGGCGCGACGCCCCCACCCACTCCAGGCTCCACGTGAGGAATTTTTAATGCTTGAAATGACTGAAAGTTGGATAGAAGGCTCAAAAAACACTTCAGCTCCAGAATCAGTTTCTTGTTCAGTTTCTAGATATGAATCATCACCGCCAAGAAGACTGGGGAAAAGAAATATTTATCATCTATTAGCTCAACGGGAGATCTCTCCTCGGACAAAACACCAAGCTAAAAATATTTGGTCTGGATCTCCAGAATGTGCTACTGGTTCAATTGAGTTAGCATTTTGGGTTACAGATGCTAGACATGATCTTTTTTCTTGGGCTGAATCACAATCCTTGCATCGGTGGTCTGCCAGGTATTGTCTTCTCCTGCCTGCTCCAAGGTCAACCATTGCAGCTGCATTCAGTCCGGATGGGAGAACACTTGCATCCACACATGGTGACCATACTGTTAAAATAATCGATTGCCAAACTGGGAAATGTTTGAAAGTGTTGCTTGGACATTGG ]
[+] EMBL CB632261 [ TTTGCTCTATGGGATGCTAAAACCTCCCGTTGCATTGGATCACACTTCTTCTATAAGCAAATTGCATCAATTGCATTTCATGCAAAGGGGGAGCTTCTGGCGGTTGCTTCAGGGCACAAACTGTTCATATGGGACTACAATAAACGAGATGAAGCTTCTGACCCACCAATGATATTAAGAACTCGCCGTTCACTGAGAGCTGTTCAATTTCATCCCAATGGGGCTCCGTATCTACTGACTGCAGAGGTTAACAATCTTGATTCTGCTGATTCAGAACTGACCCATGCAACATCTTCTGGCTATTCAAACTCGCCTTCGGCTGTATTTTTTGCAATCATGAACTCCGCATGTTGTCCATACTCTGAGTCTAGGTTTTCATCACCGTGCTTGATCTGGCCTGCATATGTCAGAGATGATGGAAGCATATGTCTGCTTCGCAATGACTGGGTTAGTGGTTCATCCGATGTGCAGCAGCCATCAGATTCTGAAACTCAACAGGCTGGCCATATGGTTACACCTATGGATGTATGCCCTGGAGAACCTGGGGTGAATAATTATGATGATGAAGATTCTGCATCTTTATCAAATAGAATAGAAATGCATACTCCCAGTTGGCAGAATAGCTCAAGATTTCACAACAGTAGTGCTGCTACTGATCTTCACAGGATTGATATAAGACAAGTTTCTGACCTGAGCAGTGATACGCCAAATCCAGAAATGCCTGCACATTCAAGAATTGATGTTCCAAATAGTATGCCAATGGATTTGTTCGCCTCTTC AATACAATAGATGT ]
[+] EMBL CB670180 [ CCCATGCCACATCTTCTGGCTATTCAAACTCGCCTTCGGCTGTATTTTTTGCAATCATGAACTCCGCATGTTGTCCATACTCTGAGTCTAGGTTTTCATCACCGTGCTTGATCTGGCCTGCATATGTCAGAGATGATGGAAGCATATGTCTGCTTCGCAATGACTGGGTTAGTGGTTCATCCGATGTGCAGCAGCCATCAGATTCTGAAACTCAACAGGCTGGCCATATGGTTACACCTATGGATGTATGCCCTGGAGAACCTGGGGTGAATAATTATGATGATGAAGATTCTGCATCTTTATCAAATAGAATAGAAATGCATACTCCCAGTTGGCAGAATAGCTCAAGATTTCACAACAGTAGTGCTGCTACTGATCTTCACAGGATTGATATAAGACAAGTTTCTGACCTGAGCAGTGATACGCCAAATCCAGAAATGCCTGCACATTCAAGAATTGATGTTCCAAATAGTATGCCAATGGATTTGTTCGCCTTTTCAAATACAATAGATGTTCAAATGTTCCTAAGAGACGTAGAGGCCGGACATCACCATAATAATTACACTGGTGGATCACATAGCTGGGAACTGCCTTTTCTCCAGGGTTGGTTGATGGCACAAAACCGTACAGGATTGCGTGCAACACTTCCTAACAATGAGGTTATAGGAGACTTACCTATCGGTGGCACTGCTGGGACTGATAATGTGATGAATGAATCATCAAACATGTACAGTTTTGAACGTGTAGGGCCTTCATCATCAATTCC ATTACTACGGACAGTTTGAGAGGGCTAAGT AACATCGTCATATGC ]
[-] EMBL CB670181 [ CACNTACATCAGAGCACATACTACTGGCATATGGTCGTCGTCATAACTCACTTCTGAGGGGCATTTTCATGGATGGCAAGACCACAATCCCTGTGTACACTGTCTTGGAGGTGTATAGAGTTTCAGACATGGAGCTTGTAAGAGTTATCCCTAGTGCTGAAGATGAAGTCAATGTCGCATGTTTTCATCCTTCCCCTGGTGCAGGTCTTGTTTATGGGACTAAGGAAGGAAAGCTCAGGATAATTCAACA CAATGTTGCAGACTACTAGGGGAAATATTCTTGAGGAACTTATCTCCACAGATTCATATGCCCAATGAATCATATCCCATCCCAGCTAAATCATGGTGGTCAATTTTGAAGGACCAACATGCAGATGTTCGCCTTCCTGAGTAATCCACAACATGATTGCA CTGAGACTCCGGAAAACATTTTGTGACGATCA TGAAGACTTCGCTCTGCACCTAGGTAACAGTGACGCGGGTAAGAACTAAGAAGCAAGCTGTGAGAGAACAGTCAAGGAAACCGCTCCCGGTGGCAGCATATGTGACTAAGTTAGTGGTTGACTAATTTCATTGCTAGAGGTAGAGCAGGAGGATGCTGGTGTATTGATGCTGCCTTAGCCAGAAAATGGGGTAGCAGATGAAATCTAGCAATTGGCATACATGTCAATGTGTCATGTTGCTCTGCATGACGTTGTCCTAATGGACTGTAACAATGGGATGTTGCTGCAATCAGAAGCACGTACGCTCTTATTAACATGATTTGCTGTTATGC ]
[-] EMBL CB632262 [ ATGGATGGCAAGACCACAATCCCTGTGTACACTGTCTTGGAGGTGTACAGAGTTTCAGACATGGAGCTTGTAAGAGTTATCCCTAGTGCTGAAGATGAAGTCAATGTCGCATGTTTTCATCCTTCCCCTGGTGCAGGTCTTGTTTATGGGACTAAGGAAGGAAAGCTCAGGATAATTCAAAA CAATGTTGCAGACTACTAGGGGAAATATTCTTGAGGAACTTATCTCCACAGATTCATATGCCCAATGAATCATATCCCATCCCAGCTAAATCATGGTGGTCAATTTTGAAGGACCAACATGCAGATGTTCGCCTTCCTGAGTAATCCACAACATGATTGCA CTGAGACTCCGGAAAACATTTTGTGACGATCA TGAAGACTTCGCTCTGCACCTAGGTAACAGTGACGCGGGTAAGAACTAAGAAGCAAGCTGTGAGAGAACAGTCAAGGAAACCGCTCCCGGTGGCAGCATATGTGACTAAGTTAGTGGTTGACTAATTTCATTGCTAGAGGTAGAGCAGGAGGATGCTGGTGTATTGATGCTGCCTTAGCCAGAAAATGGGGTAGCAGATGAAATCTAGCAATTGGCATACATGTCAATGTGTCATGTTGCTCTGCATGACGTTGTCCTAATGGACTGTAACAATGGGATGTTGCTGCAATCAGAAGCACATACGCTCTTATTAACATGATTTGCTGTTATGCAAATCTTTTTTCTGCCGGTATATGGACTGGGGTTGGTGTATGTTGGGCAAATGAATCCCAAAACCACCATTAGTA ]
[+] EMBL BQ906349 [ AATTCAACACCAATGTTGCAGACTACTAGGGGAAATATTCTTGAGGAACTTATCTCCACAGATTCATATGCCCAATGAATCATATCCCATCCCAGCTAAATCATGGTGGTCAATTTTGAAGGACCAACATGCAGATGTTCGCCTTCCTGAGTAATCCACAACATGATTGCACCTGAGACTCCGGAAAACATTTTGTGACGATCACTGAAGACTTCGCTCTGCACCTAGGTAACAGTGACGCGGGTAAGAACTAAGAAGCAAGCTGTGAGAGAACAGTCAAGGAAACCGCTCCCGGTGGCAGCATATGTGACTAAGTTAGTGGTTGACTAATTTCATTGCTAGAGGTAGAGCAGGAGGATGCTGGTGTATTGATGCTGCCTTAGCCAGAAAATGGGGTAGCAGATGAAATCTAGCAATTGGCATACATGTCAATGTGTCATGTTGCTCTGCATGACGTTGTCCTAATGGACTGTAACAATGGGATGTTGCTGCAATCAGAAGCACATACGCTCTTATTAACATGATTTGCTGTTATGCAAAaaaaaaa ]
[+] EMBL BM421270 [ AACATTTTGTGACGATCA TGAAGACTTCGCTCTGCACCTAGGTAACAGTGACGCGGGTAAGAACTAAGAAGCAAGCTGTGAGAGAACAGTCAAGGAAACCGCTCCCGGTGGCAGCATATGTGACTAAGTTAGTGGTTGACTAATTTCATTGCTAGAGGTAGAGCAGGAGGATGCTGGTGTATTGATGCTGCCTTAGCCAGAAAATGGGGTAGCAGATGAAATCTAGCAATTGGCATACATGTCAATGTGTCATGTTGCTCTGCATGACGTTGTCCTAATGGACTGTAACAATGGGATGTTGCTGCAATCAGAAGCACATACGCTCTTATTAACATGATTTGCTGTTATGCAAATCTTTTTTCTGCCGGTATATGGACTGGGGTTGGTGTATGTTGGGCAAATGAATCCC AAACCA CATTAGTAAATGCGAGAAAATGGGTATCAAAAA]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||