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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11147#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 2737 fasta sequence
[TTTTTTCTAGAAGGTGTAAGACATAAATTATGCCAGCAATAAACATACCATTGTTCTCCTAAAATTTCACATTACAACATAGATATCCATCCTTTGATGTTTGATCCCAACCCAAACTCCCTTGTCAACCCAAGTCTACAAAAAGAACACCTTTTTAAGATTTTAGACCCAAAAGGATCTACAATGAACGAA-ATAACGCGTGGCATTGTACTCTAATT-ATCACTTATCACGTAGAAGTAGTCTTCATGGCCTTGAATGCTGGGTGGAGCAACCCTAGTTCATCCTTGACATCAAGTGGGTTGCTAGTCTCATTCCTGATCCTCTTCACCTTCCTGCTG-CCAAGCGACTTGTGTGTAAACCCATACATTTGCAAGATCTGATTATCCCCAAAATTGAAAGCACGCTCCATCTGCTTGAGGCACCTCTCCACAGGGTAATCCCCAAACTTCCCACACGGCTTGCATCCGACAAAGTGAGTGACCAGTGGCCACCGGTGATCACCAAGTCCTGGATGGTAATTCTCAAGCATTTCCTCATACCTATCAACCAAGATACCCCAATATCCATGGAGGTAATACCCATTCTCAAGGTACACCTTGTCACCCCATTTCTCACGCTCTGTAGCAAGGATGTATACCATGGCCGACTGATCATCAGCCTCAAACACCGGCCGATCCTTCAAGTACTTGGTCAAAACCTTCCCGGCCTCAATACGGACAGGGCCCTTTGGTCCCATTGGTGCCCATGTATCAAGGAAATCAAGCGACCATTGGCAGTTGCGCAGCAAGAAGCTGCCTGTGTTGAGGCCAATCCAGTTCTTGTCGTCGTAGACCATCTCATCCCAGCCGTGCATGATGAGGTTGTAGGGGCCGTACCGCTCCCATGGCAGCTCGAATGCCATGTCGGAGAACATGGCGTCGGAGTCCATCCACCAGAGGAACTCGATCTCCGGGTGCGCGAGGAGCAGCGCGCGGAGGAGCGGGAGCTTGGCCCAGAATCCGGCCATCTCGGCGTCGAGCAGCGCCATGTTGTAGAAGATCTCGAGGCCGTGGACGCGGCAGTAGTCCATCTTGTTCTTGATGGACTTGAGGAGGTAGTGGTCGCCGACGGGGTTCTCGCACGGCTTGGGCGAGGAGCCCGTGACGAGCAGCACCCGCGGCTTGACGTCGTTGACGAAGGGCGGCGTCTCCGGGTGGCGGCGGTGCCACGCGGCCCGCTGCTCGTCCCAGTCGGAGATCTTGGGGCCCAGCGTGTAGGGCGGGTCCCGGAGCGTCCTCGGCGGCGGGTCCGGCTCGTCGTCCCGCTGGGCCGCGCGCCCGGAGGAGGACGACGAGCCGCCGCCCCTCGACAGCGCGTCGTGGTGCTCCGCCAGCGCGCGGTGCGGGTGCGAGATGAAGCGGTGGCGGAGCTCGATGAGGTCCTGCTGCGGCGTGCCGAACTTGCCCGCCCCGACGGTGCCGCGGAGCACGACGACGGTGAGCAGCAGGCACACTACGGTGAGCTTCGCGTTCCTCGCGAACCGCTGGATCTCCCGCATCCGCCGCTCCCCCACCACCCGCTCCGCCACCCACATTTTGCCCCCCTCCCTCTCCTGCCCCTTCCTCCGATCCCCCCACACCGATCAAACAAACAAATAAACAAACAAACCCTCCTCCCCCAACCCAAAAGCAGCAAATCAAAAATGCAGGCAAGGAATCACCGGTATACCGCGTCTACGGCGACGGCGGCGGCGTCGGCGGCGCGGAGTGGTGGTGGTGGTGGTGGTGGTGGAGGAAGAAGCCGAGGAGGTTTTGAACCGCGGAGTTGGAGGCGAATTAATAAGAGAAAGGGCGAGGCGGAGTGGTGCCGCGACCCGCGAGCGAGCGAAGCGCGCACGTTGGCCTCGGAGAGCGGATTGCGGTGGCTGTCTGAGCGATCGGGAGGCGGAATGGAAGGGGAAATCTGGGGAGACGCGAAATCGGAATCGAAATCGAATCAACCCCCTGACCCGGCCGCTGCAAGGAGGAGGAAGGAGGAGGAGAAGGAGAAGGCCGAAGGGGAAGGTGGTGGTGGTAAAAGGGGAGGGGAATAGCCAGCCAACGCGTTGCGAGATGCGATGCTTCTACTCCTTTCCCCGCTGTCGCCCGGTAATTTGACTTGATCCTCTCGCGTGGGCGTATGACCGGTGGGGCCACCCGCGTGGGGCCCTACGGGTTTTGTATGGTAATTTTCTCTGGCTTTTTTTTTTGCTCGGTTATAAACGGGGGGTTAATTAACCAGTGGCGGCCAGTTGTAACCAGCCCAGGGGCAAGCGACGTCGCGAGGCGATTGCACATGACGCGGTGACTTTTCTCCAACGTTTAAACACGCGTCCCCATCAACGGCCGTGCCACCACCTCGCTCAAACGAAGCGGGCTGTTCCTCCGCGTCGCTGACGGGTGGGCCATTGCGTCGACACTGACCCACCTGTCAGTGGCGTGGTACTAGTTTCGGCGATGTAGCTGCCGGAGGTGGAGTTGTCGGTTGAGGAGCTAATCACTGGTGTGTGATGGCGATGGCCATAACGATGTTTTTTTTAAAGATTAAAGTGGACATCAGGGTATGTAAGCCAAATTACTCCTCTAGAAGCCCAGTTATTATGCCTTTTCCTTTTGTTTAGTTTGGGTTGGTAAGTAGCGCCAAACAGTAGTAGTTTTATTTTTCAACCATGTAACATCACATTGGACCAGGTTTCTCTCAAATATAATGTACTACGCAT]
[-] EMBL BI804641 [TTTTTTCTAGAAGGTGTAAGACATAAATTATGCCAGCAATAAACATACCA TGTTCTCCTAAAATTTCACATTACAACATAGATATCCATCC TTGATG TTGATCCCAACCCAAACTCCC TGTCAACCCAAGTCTACAAAAAGAACACCTTTTTAAGATTTTAGACCCAAAAGGATCTACAATGAACGAACATAACGCGTGGCA TGTACTCTAATTCATCACTTATCACGTAGAAGTAGTCTTCATGGCCTTGAATGCTGGGTGGAGCAACCCTAGTTCATCCTTGACATCAAGTGGG TGCTAGTCTCATTCCTGATCCTCTTCACCTTCCTGCTGACCAAGCG ]
[-] EMBL AK060863 [ TAAACATACCATTGTTCTCCTAAAATTTCACATTACAACATAGATATCCATCCTTTGATGTTTGATCCCAACCCAAACTCCCTTGTCAACCCAAGTCTACAAAAAGAACACCTTTTTAAGATTTTAGACCCAAAAGGATCTACAATGAACGAA ATAACGCGTGGCATTGTACTCTAATT ATCACTTATCACGTAGAAGTAGTCTTCATGGCCTTGAATGCTGGGTGGAGCAACCCTAGTTCATCCTTGACATCAAGTGGGTTGCTAGTCTCATTCCTGATCCTCTTCACCTTCCTGCTG CCAAGCGACTTGTGTGTAAACCCATACATTTGCAAGATCTGATTATCCCCAAAATTGAAAGCACGCTCCATCTGCTTGAGGCACCTCTCCACAGGGTAATCCCCAAACTTCCCACACGGCTTGCATCCGACAAAGTGAGTGACCAGTGGCCACCGGTGATCACCAAGTCCTGGATGGTAATTCTCAAGCATTTCCTCATACCTATCAACCAAGATACCCCAATATCCATGGAGGTAATACCCATTCTCAAGGTACACCTTGTCACCCCATTTCTCACGCTCTGTAGCAAGGATGTATACCATGGCCGACTGATCATCAGCCTCAAACACCGGCCGATCCTTCAAGTACTTGGTCAAAACCTTCCCGGCCTCAATACGGACAGGGCCCTTTGGTCCCATTGGTGCCCATGTATCAAGGAAATCAAGCGACCATTGGCAGTTGCGCAGCAAGAAGCTGCCTGTGTTGAGGCCAATCCAGTTCTTGTCGTCGTAGACCATCTCATCCCAGCCGTGCATGATGAGGTTGTAGGGGCCGTACCGCTCCCATGGCAGCTCGAATGCCATGTCGGAGAACATGGCGTCGGAGTCCATCCACCAGAGGAACTCGATCTCCGGGTGCGCGAGGAGCAGCGCGCGGAGGAGCGGGAGCTTGGCCCAGAATCCGGCCATCTCGGCGTCGAGCAGCGCCATGTTGTAGAAGATCTCGAGGCCGTGGACGCGGCAGTAGTCCATCTTGTTCTTGATGGACTTGAGGAGGTAGTGGTCGCCGACGGGGTTCTCGCACGGCTTGGGCGAGGAGCCCGTGACGAGCAGCACCCGCGGCTTGACGTCGTTGACGAAGGGCGGCGTCTCCGGGTGGCGGCGGTGCCACGCGGCCCGCTGCTCGTCCCAGTCGGAGATCTTGGGGCCCAGCGTGTAGGGCGGGTCC ]
[-] EMBL AK098859 [ AACATACCATTGTTCTCCTAAAATTTCACATTACAACATAGATATCCATCCTTTGATGTTTGATCCCAACCCAAACTCCCTTGTCAACCCAAGTCTACAAAAAGAACACCTTTTTAAGATTTTAGACCCAAAAGGATCTACAATGAACGAA ATAACGCGTGGCATTGTACTCTAATT ATCACTTATCACGTAGAAGTAGTCTTCATGGCCTTGAATGCTGGGTGGAGCAACCCTAGTTCATCCTTGACATCAAGTGGGTTGCTAGTCTCATTCCTGATCCTCTTCACCTTCCTGCTG CCAAGCGACTTGTGTGTAAACCCATACATTTGCAAGATCTGATTATCCCCAAAATTGAAAGCACGCTCCATCTGCTTGAGGCACCTCTCCACAGGGTAATCCCCAAACTTCCCACACGGCTTGCATCCGACAAAGTGAGTGACCAGTGGCCACCGGTGATCACCAAGTCCTGGATGGTAATTCTCAAGCATTTCCTCATACCTATCAACCAAGATACCCCAATATCCATGGAGGTAATACCCATTCTCAAGGTACACCTTGTCACCCCATTTCTCACGCTCTGTAGCAAGGATGTATACCATGGCCGACTGATCATCAGCCTCAAACACCGGCCGATCCTTCAAGTACTTGGTCAAAACCTTCCCGGCCTCAATACGGACAGGGCCCTTTGGTCCCATTGGTGCCCATGTATCAAGGAAATCAAGCGACCATTGGCAGTTGCGCAGCAAGAAGCTGCCTGTGTTGAGGCCAATCCAGTTCTTGTCGTCGTAGACCATCTCATCCCAGCCGTGCATGATGAGGTTGTAGGGGCCGTACCGCTCCCATGGCAGCTCGAATGCCATGTCGGAGAACATGGCGTCGGAGTCCATCCACCAGAGGAACTCGATCTCCGGGTGCGCGAGGAGCAGCGCGCGGAGGAGCGGGAGCTTGGCCCAGAATCCGGCCATCTCGGCGTCGAGCAGCGCCATGTTGTAGAAGATCTCGAGGCCGTGGACGCGGCAGTAGTCCATCTTGTTCTTGATGGACTTGAGGAGGTAGTGGTCGCCGACGGGGTTCTCGCACGGCTTGGGCGAGGAGCCCGTGACGAGCAGCACCCGCGGCTTGACGTCGTTGACGAAGGGCGGCGTCTCCGGGTGGCGGCGGTGCCACGCGGCCCGCTGCT ]
[+] EMBL AK109538 [ GGAGCAACCCTAGTTCATCCTTGACATCAAGTGGGTTGCTAGTCTCATTCCTGATCCTCTTCACCTTCCTGCTG CCAAGCGACTTGTGTGTAAACCCATACATTTGCAAGATCTGATTATCCCCAAAATTGAAAGCACGCTCCATCTGCTTGAAGCACCTCTCCACAGGGTAATCCCCAAACTTCCCACACGGCTTGCATCCGACAAAGTGAGTGACCAGTGGCCACCGGTGATCACCAAGTCCTGGATGGTAATTCTCAAGCATTTCCTCATACCTATCAACCAAGATACCCCAATATCCATGGAGGTAATACCCATTCTCAAGGTACACCTTGTCACCCCATTTCTCACGCTCTGTAGCAAGGATGTATACCATGGCCGACTGATCATCAGCCTCAAACACCGGCCGATCCTTCAAGTACTTGGTCAAAACCTTCCCGGCCTCAATACGGACAGGGCCCTTTGGTCCCATTGGTGCCCATGTATCAAGGAAATCAAGCGACCATTGGCAGTTGCGCAGCAAGAAGCTGCCTGTGTTGAGGCCAATCCAGTTCTTGTCGTCGTAGACCATCTCATCCCAGCCGTGCATGATGAGGTTGTAGGGGCCGTACCGCTCCCATGGCAGCTCGAATGCCATGTCGGAGAACATGGCGTCGGAGTCCATCCACCAGAGGAACTCGATCTCCGGGTGCGCGAGGAGCAGCGCGCGGAGGAGCGGGAGCTTGGCCCAGAATCCGGCCATCTCGGCGTCGAGCAGCGCCATGTTGTAGAAGATCTCGAGGCCGTGGACGCGGCAGTAGTCCATCTTGTTCTTGATGGACTTGAGGAGGTAGTGGTCGCCGACGGGGTTCTCGCACGGCTTGGGCGAGGAGCCCGTGACGAGCAGCACCCGCGGCTTGACGTCGTTGACGAAGGGCGGCGTCTCCGGGTGGCGGCGGTGCCACGCGGCCCGCTGCTCGTCCCAGTCGGAGATCTTGGGGCCCAGCGTGTAGGGCGGGTCCCGGAGCGTCCTCGGCGGCGGGTCCGGCTCGTCGTCCCGCTGGGCCGCGCGCCCGGAGGAGGACGACGAGCCGCCGCCCCTCGACAGCGCGTCGTGGTGCTCCGCCAGCGCGCGGTGCGGGTGCGAGATGAAGCGGTGGCGGAGCTCGATGAGGTCCTGCTGCGGCGTGCCGAACTTGCCCGCCCCGACGGTGCCGCGGAGCACGACGACGGTGAGCAGCAGGCACACTACGGTGAGCTTCGCGTTCCTCGCGAACCGCTGGATCTCCCGCATCCGCCGCTCCCCCACCACCCGCTCCGCCACCCACATTTTGCCCCCCTCCCTCTCCTGCCCCTTCCTCCGATCCCCCCACACCGATCAAACAAACAAATAAACAAACAAACCCTCCTCCCCCAACCCAAAAGCAGCAAATCAAAAATGCAGGCAAGGAATCACCGGTATACCGCGTCTACGGCGACGGCGGCGGCGTCGGCGGCGCGGAGTGGTGGTGGTGGTGGTGGTGGTGGAGGAAGAAGCCGAGGAGGTTTTGAACCGCGGAGTTGGAGGCGAATTAATAAGAGAAAGGGCGAGGCGGAGTGGTGCCGCGACCCGCGAGCGAGCGAAGCGCGCACGTTGGCCTCGGAGAGCGGATTGCGGTGGCTGTCTGAGCGATCGGGAGGCGGAATGGAAGGGGAAATCTGGGGAGACGCGAAATCGGAATCGAAATCGAATCAACCCCCTGACCCGGCCGCTGCAAGGAGGAGGAAGGAGGAGGAGAAGGAGAAGGCCGAAGGGGAAGGTGGTGGTGGTAAAAGGGGAGGGGAATAGCCAGCCAACGCGTTGCGAGATGCGATGCTTCTACTCCTTTCCCCGCTGTCGCCCGGTAATTTGACTTGATCCTCTCGCGTGGGCGTATGACCGGTGGGGCCACCCGCGTGGGGCCCTACGGGTTTTGTATGGTAATTTTCTCTGGCTTTTTTTTTTGCTCGGTTATAAACGGGGGGTTAATTAACCAGTGGCGGCCAGTTGTAACCAGCCCAGGGGCAAGCGACGTCGCGAGGCGATTGCACATGACGCGGTGACTTTTCTCCAACGTTTAAACACGCGTCCCCATCAACGGCCGTGCCACCACCTCGCTCAAACGAAGCGGGCTGTTCCTCCGCGTCGCTGACGGGTGGGCCATTGCGTCGACACTGACCCACCTGTCAGTGGCGTGGTACTAGTTTCGGCGATGTAGCTGCCGGAGGTGGAGTTGTCGGTTGAGGAGCTAATCACTGGTGTGTGATGGCGATGGCCATAACGATGTTTTTTTTAAAGATTAAAGTGGACATCAGGGTATGTAAGCCAAATTACTCCTCTAGAAGCCCAGTTATTATGCCTTTTCCTTTTGTTTAGTTTGGGTTGGTAAGTAGCGCCAAACAGTAGTAGTTTTATTTTTCAACCATGTAACATCACATTGGACCAGGTTTCTCTCAAATATAATGTACTACGCAT]
[-] EMBL CB641040 [ CAAAAGCAGCAAATCAAAAATGCAGGCAAGGAATCACCGGTATACCGCGTCTACGGCGACGGCGGCGGCGTCGGCGGCGCGGAGTGGTGGTGGTGGTGGTGGTGGTGGAGGAAGAAGCCGAGGAGGTTTTGAACCGCGGAGTTGGAGGCGAATTAATAAGAGAAAGGGCGAGGCGGAGTGGTGCCGCGACCCGCGAGCGAGCGAAGCGCGCACGTTGGCCTCGGAGAGCGGATTGCGGTGGCTGTCTGAGCGATCGGGAGGCGGAATGGAAGGGGAAATCTGGGGAGACGCGAAATCGGAATCGAAATCGAATCAACCCCCTGACCCGGCCGCTGCAAGGAGGAGGAAGGAGGAGGAGAAGGAGAAGGCCGAAGGGGAAGGT ]
[-] EMBL CB641039 [ AAAAGCAGCAAATCAAAAATGCAGGCAAGGAATCACCGGTATACCGCGTCTACGGCGACGGCGGCGGCGTCGGCGGCGCGGAGTGGTGGTGGTGGTGGTGGTGGTGGAGGAAGAAGCCGAGGAGGTTTTGAACCGCGGAGTTGGAGGCGAATTAATAAGAGAAAGGGCGAGGCGGAGTGGTGCCGCGACCCGCGAGCGAGCGAAGCGCGCACGTTGGCCTCGGAGAGCGGATTGCGGTGGCTGTCTGAGCGATCGGGAGGCGGAATGGAAGGGGAAATCTGGGGAGACGCGAAATCGGAATCGAAATCGAATCAACCCCCTGACCCGGCCGCTGCAAGGAGGAGGAAGGAGGAGGAGAAGGAGAAGGCCGAAGGGGAAGGT ]
[-] EMBL CB641267 [ CAAATCAAAAAGGCAGGCAAGGAATCACCGGTATACCGCGTATACGGCGACGGCGCCGGTGTCGGCGGCGCGGAGTGGTGGTGGTGGTGGTGGTGGTGGAGGAAAAAGCCTAGGAGGTTTTGAACCGCGGAGTTGGAGGCGAATTAATAAGAGAAAGGGCGAGGCGGAGTGGTGCCGCGACCCGCGAGCGAGCGAAGCGCGCACGTTGGCCTCGGAGAGCGGATTGCGGTGGCTGTCTGAGCGATCGGGAGGCGGAATGGAAGGGGAAATCTGGGGAGACGCGAAATCGGAATCGAAATCGAATCAACCCCCTGACCCGGCCGCTGCAAGGAGGAGGAAGGAGGAGGAGAAGGAGAAGGCCGAAGGGGGAGGgt ]
[-] EMBL CB641266 [ ATTAATAAGAGAAAGGGCGAGGCGGAGTGGTGCCGCGACCCGCGAGCGAGCGAAGCGCGCACGTTGGCCTCGGAGAGCGGATTGCGGTGGCTGTCTGAGCGATCGGGAGGCGGAATGGAAGGGGAAATATGGGGAGACGCGAAATCGGAATCGGAATGGAATCAACCCCCTGACCCGGCCGCTGCAAGGAGGAGGAAGGAGGAGGAGAAGGAGAAGGCCGAAGGGGAA ]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||