These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11657#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 2865 fasta sequence [GCTTCCATTTATTCGAACCAGCTAGGTATGAGATATGGAGCTAAGCAAGAGCAGATGGATGGCATGGACAAGTCAAAAGACACCTTGCAAGCTATGGCACCTGAAAATTCTGTGCTGGATCAACAACAACCTCAGGCCCCACATTTGTCACAGCAAGCAGGCCCACGAAACATGCAACAGTGGCAGAATCCTCGTTTTTCAGGTGAGAAGGACTTGAAGAAAGAAGAAATGCTTCAGAGAAGGAAGATAGCTGCTACTTCTCGTGTCTCTTCTGTACCAATGGTTCAGTCTCCAGTCTCCTCAAAATCTGGGGAGATATCAAGCAGTTCAATGAGTGCCCAGTTTGGCGCTGCTGTGACATCTGCTGTAATGGGATCACAGAAAGACAAGTTCCCTGCAAATTCCAATCCTGCAGTAGTGGGCTATCCCCCTGTTGCTTCTAGCCCTAGTGATTCAATGCACCGGATGCAGCAGCCTTCAGTTGCTCCTTCAAAGAGAAAATCAAATTCTGTTCCCAAAACTCAACCGCCTGTGAGTGGTGTAGGGTCTCCAGCCAGTGTTTCAAACATGCATGCTGTACTGAATGCTAGCAGCCCATCAATTGGGACTGCACCTATGGGTGATCAAGCAATCCTTGAGAGATTTGTCAAAATTGATGCCATATCTCAAAGGTGCAAGCTGCACAGCAAGAAGAACAAAGTTGACAATATACCTCAGAGAAAACCGATTATCAATGCAAGCCAAGAGAAAGTTGCTACAGTTCTCTCCAATTGCTTTCATGCTGAAGATTTTAGAGATGAAATAAAACCTCTTTGTAACTCTATGTTGGGTGGAACAATGAATTCCTTTAAGACTAGAATACTAAACTTTGTGGTCAACAACCGCATGTACCAAGGCCCTACAAAGCCATTCCGTATCATTTTCAAGGAGAAGCATGATGGAACAGTGGCGATGCAATATGGAGATCCAGAAGATTTTG-ACAATCAGAACTCATATGAGTGTACACTGATATTGCCCACCAAGTACCACGCTGATCTGCTTGCGAAGCAACTTATTATCCGGATGGACCGAGAAGGCCATACCAAGGCAGACGATCAAGTTGCGCTTAGCACCCCTCCTGGTAACCTCAGTGCATTATCAGGAATTTTACCAGACAACACGGTAAATGATGTGAAACAAGAAGGTGGTATTAGCCATCAGCTAAATGCTGCAGCTCATGCAAATATGACACCTGGAACCCCTTTACAACAACACCCTGCCAATAGGATGCTTCCATCTGTGAATAACCAAGCGTTAATGCAGCAAGGATACATGCAGGGGGCAAACATGCCTCCGAGGAGTCAACAGCTTGACCAGAATTTGATTCAGCAGCAGCAACAGCAGCCGCCGCAGCTGCAGCAAAATGCACAAGCACAACTGCAGCAACCAGCATCTCTTCCTCTCAACCAGATGCAGAGACCTCAACTTCTACCAACGAACCCATTATCTCAGATGCTGGGGAATACTGGCTCCAATCTTCCGATGGCCTCAAGCCACATGGGTAACAAGGTCGCTCCTAATTCTGTGCAGCTTCAGATGATGCAGCAGCAGCAACAGTCGAGGAAAATGATGATGGGCCTCGGCTCGCCTGCCAACATGGGTAATATGGTTAACAATGTTGTTGGCCTCAACAATATTGGAAATGTTATGGGAATGGGCAATGTGCGGCCAATGTCGTCCCCAATGGGAAACATGTCAGGCTTAGGGAACAACCCCAATCAGATGAGCCTTGGAATGGTATCCAGTCTCTCTGCACCTGGGATTCGTCCAGGTATGACACATGCTGCTATTGCCAAGATGCGAATGGGGTTGATACAGCAGCAAAGAGCAGCAGGCATTTACCCCCAGACTAGCATGGTCGGAATGCCTGGGAGCAGTTCTCCGATTCTTCCTGGTTCTGCCAATTTGTCCATGATGAATCAGCTAAACAGAAGCAACATTAACCCTTTGCAGCGGGCCATGATGGGTCCACCAAAGATGCCAGGCAGTAATTACCCGTTGACTCCGCAACAGCAAATGCAACTCCAGCAACAGTTCCAACAGAACCCGCTGCAGCAGCAGCAACTGCAGCAACTCCAACAACAGCAGCAGCAACAACAACAACAGCAAATCCAGCAGCAGCAGCAGCAGCAACAGCAACAGCAGCAGCAGCAGCAGCAAATTCAGCAGCAGCAACAACAAATGGGCTCTCCGTTACAGCAGGCGGCACAGGTGGGCTCACCTGCTGGTTCGCAGCAGTCATTGGTGATGTCGCAGCATCAGCAAATAAGCCCACAGCAAATGGCCGCGATGAGTCCACAGCTGAGCTCAGGCACCATGCAGCAAGTGAAT-AACAATGTTATCAACCACGTAGCCACACCAGGCCCTCCTCCTAGCCCGCAGCTCAGCTCACAGA-CCCAT-GGGTCGGTCAACAGCATCGCAAACTCCCCAAT-GGAGCAGTTGCAAGGTGCCAATAAAGGAGGTCCA-GGGAGCATGTAGTGACGGCAAATAATT-GTTTCTGTGATGGACATACAAAATAATGCAAGGTATAAATATCGGCAGTGATCAGCACTTTTTCTTATTTGTTGTGGTAAATGATGTTAAAGTTAGGTGTCCTGTAAGTTATAG-CCAATAGATGAAGATATTATGGAGGATCAGCCTTACG-CA-GGGATTTCTGATGTTGTAGATTTTAGATAATGAAATTAGTACCTTTAGGGGATTGGTACTGATGAAAGTTTTGTTCAATGGGACTACTTTCTTGTTTAAATTAATTATCAAGTTTGTGTAATAGCTATGTAACCGTGGTGCTTATTAATAAGTATCTTCATTTGATTGTGGAAAAAAAAA] [+] EMBL CB631613 [GCTTCCATTTATTCGAACCAGCTAGGTATGAGATATGGAGCTAAGCAAGAGCAGATGGATGGCATGGACAAGTCAAAAGACACCTTGCAAGCTATGGCACCTGAAAATTCTGTGCTGGATCAACAACAACCTCAGGCCCCACATTTGTCACAGCAAGCAGGCCCACGAAACATGCAACAGTGGCAGAATCCTCGTTTTTCAGGTGAGAAGGACTTGAAGAAAGAAGAAATGCTTCAGAGAAGGAAGATAGCTGCTACTTCTCGTGTCTCTTCTGTACCAATGGTTCAGTCTCCAGTCTCCTCAAAATCTGGGGAGATATCAAGCAGTTCAATGAGTGCCCAGTTTGGCGCTGCTGTGACATCTGCTGTAATGGGATCACAGAAAGACAAGTTCCCTGCAAATTCCAATCCTGCAGTAGTGGGCTATCCCCCTGTTGCTTCTAGCCCTAGTGATTCAATGCACCGGATGCAGCAGCCTTCAGTTGCTCCTTCAAAGAGAAAATCAAATTCTGTTCCCAAAACTCAACCGCCTGTGAGTGGTGTAGGGTCTCCAGCCAGTGTTTCAAACATGCATGCTGTACTGAATGCTAGCAGCCCATCAATTGGGACTGCACCTATGGGTGATCAAGCAATCCTTGAGAGATTTGTCAAAATTGATGCCATATCTCAAAGGTGCAAGCTGCACAGCAAGAAGAACAAAGTTGACAATATACCTCAGAGAAAACCGATTATCAATGCAAGCCAAGAGAAAGTTGCTACAGTTCTCTCCAATTG ] [+] EMBL CB631741 [ AAGACAAGTTCCCTGCAAATTCCAATCCTGCAGTAGTGGGCTATCCCCCTGTTGCTTCTAGCCCTAGTGATTCAATGCACCGGATGCAGCAGCCTTCAGTTGCTCCTTCAAAGAGAAAATCAAATTCTGTTCCCAAAACTCAACCGCCTGTGAGTGGTGTAGGGTCTCCAGCCAGTGTTTCAAACATGCATGCTGTACTGAATGCTAGCAGCCCATCAATTGGGACTGCACCTATGGGTGATCAAGCAATCCTTGAGAGATTTGTCAAAATTGATGCCATATCTCAAAGGTGCAAGCTGCACAGCAAGAAGAACAAAGTTGACAATATACCTCAGAGAAAACCGATTATCAATGCAAGCCAAGAGAAAGTTGCTACAGTTCTCTCCAATTGCTTTCATGCTGAAGATTTTAGAGATGAAATAAAACCTCTTTGTAACTCTATGTTGGGTGGAACAATGAATTCCTTTAAGACTAGAATACTAAACTTTGTGGTCAACAACCGCATGTACCAAGGCCCTACAAAGCCATTCCGTATCATTTTCAAGGAGAAGCATGATGGAACAGTGGCGATGCAATATGGAGATCCAGAAGATTTTG ACAATCAGAACTCATATGAGTGTACACTGATATTGCCCACCAAGTACCACGCTGATCTGCTTGCGAAGCAACTTATTATCCGGATGGACCGAGAAGGCCATACCAAGGCAGACGATCAAGTTGCGCTTAGCACCCCTCCTGGTAACCTCAGTGCATTATCAGGAATTTTACCAGAACACACGGTAAATGATGTGAAACAAGAAGGTGGTATTAGCCATCAGC ] [+] EMBL AK063378 [ AGAAGATTTTG ACAATCAGAACTCATATGAGTGTACACTGATATTGCCCACCAAGTACCACGCTGATCTGCTTGCGAAGCAACTTATTATCCGGATGGACCGAGAAGGCCATACCAAGGCAGACGATCAAGTTGCGCTTAGCACCCCTCCTGGTAACCTCAGTGCATTATCAGGAATTTTACCAGACAACACGGTAAATGATGTGAAACAAGAAGGTGGTATTAGCCATCAGCTAAATGCTGCAGCTCATGCAAATATGACACCTGGAACCCCTTTACAACAACACCCTGCCAATAGGATGCTTCCATCTGTGAATAACCAAGCGTTAATGCAGCAAGGATACATGCAGGGGGCAAACATGCCTCCGAGGAGTCAACAGCTTGACCAGAATTTGATTCAGCAGCAGCAACAGCAGCCGCCGCAGCTGCAGCAAAATGCACAAGCACAACTGCAGCAACCAGCATCTCTTCCTCTCAACCAGATGCAGAGACCTCAACTTCTACCAACGAACCCATTATCTCAGATGCTGGGGAATACTGGCTCCAATCTTCCGATGGCCTCAAGCCACATGGGTAACAAGGTCGCTCCTAATTCTGTGCAGCTTCAGATGATGCAGCAGCAGCAACAGTCGAGGAAAATGATGATGGGCCTCGGCTCGCCTGCCAACATGGGTAATATGGTTAACAATGTTGTTGGCCTCAACAATATTGGAAATGTTATGGGAATGGGCAATGTGCGGCCAATGTCGTCCCCAATGGGAAACATGTCAGGCTTAGGGAACAACCCCAATCAGATGAGCCTTGGAATGGTATCCAGTCTCTCTGCACCTGGGATTCGTCCAGGTATGACACATGCTGCTATTGCCAAGATGCGAATGGGGTTGATACAGCAGCAAAGAGCAGCAGGCATTTACCCCCAGACTAGCATGGTCGGAATGCCTGGGAGCAGTTCTCCGATTCTTCCTGGTTCTGCCAATTTGTCCATGATGAATCAGCTAAACAGAAGCAACATTAACCCTTTGCAGCGGGCCATGATGGGTCCACCAAAGATGCCAGGCAGTAATTACCCGTTGACTCCGCAACAGCAAATGCAACTCCAGCAACAGTTCCAACAGAACCCGCTGCAGCAGCAGCAACTGCAGCAACTCCAACAACAGCAGCAGCAACAACAACAACAGCAAATC CAGCAGCAGCAGCAGCAACAGCAACAGCAGCAGCAGCAGCAGCAAATTCAGCAGCAGCAACAACAAATGGGCTCTCCGTTACAGCAGGCGGCACAGGTAGGCTCACCTGCTGGTTCGCAGCAGTCATTGGTGATGTCGCAGCATCAGCAAATAAGCCCACAGCAAATGGCCGCGATGAGTCCACAGCTGAGCTCAGGCACCATGCAGCAAGTGAAT AACAATGTTATCAACCACGTAGCCACACCAGGCCCTCCTCCTAGCCCGCAGCTCAGCTCACAGA CCCAT GGGTCGGTCAACAGCATCGCAAACTCCCCAAT GGAGCAGTTGCAAGGTGCCAATAAAGGAGGTCCA GGGAGCATGTAGTGACGGCAAATAATT GTTTCTGTGATGGACATACAAAATAATGCAAGGTATAAATATCGGCAGTGATCAGCACTTTTTCTTATTTGTTGTGGTAAATGATGTTAAAGTTAGGTGTCCTGTAAGTTATAG CCAATAGATGAAGATATTATGGAGGATCAGCCTTACG CA GGGATTTCTGATGTTGTAGATTTTAGATAATGAAATTAGTACCTTTAGGGGATTGGTACTGATGAAAGTTTTGTTCAATGGGACTACTTTCTTGTTTAAATTAATTATCAAGTTTGTGTAATAGCTATGTAACCGTGGTGCTTATTAATAAGTATCTTCAT ] [+] EMBL CB668308 [ ATTTTGCACTATCAGAACTCATATGAGTGTACACTGATATTGCCCACCAAGTACCACGCTGATCTGCTTGCGAAGCAACTTATTATCCGGATGGACCGAGAAGGCCATACCAAGGCAGACGATCAAGTTGCGCTTAGCACCCCTCCTGGTAACCTCAGTGCATTATCAGGAATTTTACCAGACAACACGGTAAATGATGTGAAACAAGAAGGTGGTATTAGCCATCAGCTAAATGCTGCAGCTCATGCAAATATGACACCTGGAACCCCTTTACAACAACACCCTGCCAATAGGATGCTTCCATCTGTGAATAACCAAGCGTTAATGCAGCAAGGATACATGCAGGGGGCAAACATGCCTCCGAGGAGTCAACAGCTTGACCAGAATTTGATTCAGCAGCAGCAACAGCAGCCGCCGCAGCTGCAGCAAAATGCACAAGCACAACTGCAGCAACCAGCATCTCTTCCTCTCAACCAGATGCAGAGACCTCAACTTCTACCAACGAACCCATTATCTCAGATGCTGGGGAATACTGGCTCCAATCTTCCGATGGCCTCAAGCCACATGGGTAACAAGGTCGCTCCTAATTCTGTGCAGCTTCAGATGATGCAGCAGCAGCAACAGTCGAGGAAAATGATGATGGGCCTCGGCTCGCCTGCCAACATGGGTAATATGGTTAACAATGTTGTTGGCCTCAACAATATTGGAAATGTTATGGGAATGGGCAATGTGCGGCCAATGTCGTCCCCAATGGGAAACATGTCAGGCTTANGGAACAACCCCCATCAGAT ] [+] EMBL CA764107 [ TACAGCAGCAAAGAGCAGCAGGCATTTACCCCCAGACTAGCATGGTCGGAATGCCTGGGAGCAGTTCTCCGATTCTTCCTGGTTCTGCCAATTTGTCCATGATGAATCAGCTAAACAGAAGCAACATTAACCCTTTGCAGCGGGCCATGATGGGTCCACCAAAGATGCCAGGCAGTAATTACCCGTTGACTCCGCAACAGCAAATGCAACTCCAGCAACAGTTCCAACAGAACCCGCTGCAGCAGCAGCAACTGCAGCAACTCCAACAACAGCAGCAGCAACAACAACAACAGCAAATCCAGCAGCAGCAGCAGCAGCAACAGCAACAGCAGCAGCAGCAGCAGCAAATTCAGCAGCAGCAACAACAAATGGGCTCTCCGTTACAGCAGGCGGCACAGGTGGGCTCACCTGCTGGTTCGCAGCAGTCATTGGTGATGTCGCAGCATCAGCAAATAAGCCCACAGCAAATGGCCGCGATGAGTCCACAGCTGAGCTCAGGCACCATGCAGCAAGTGAAT AACAATGTTATCAACCACGTAGCCACACCAGGCCCTNCTNCTAGCCCGCAGCTCAGCTCACAGACCCCATGGGGTCGGTCAACAGCATCGCAAACTCCCCAATGGGAGCAGNTGCAAGGTGCCAATAAAGGAGGTCCA GGGAGCATGTAGTGACGGCAAATAATTGGTTTTTGNGATGGACATACAAAATAATGCAAGGTATNAATATCGGCAGNGATCAGCACNTTTTTTTATTTGGTG GGGAAATGATGGTTAAGGTAGGNGTCCTGNAAGTTNTAGNCCAt ] [-] EMBL CB631614 [ ATGATGGGTCCACCAAAGATGCCAGGCAGTAATTACCCGTTGACTCCGCAACAGCAAATGCAACTCCAGCAACAGTTCCAACAGAACCCGCTGCAGCAGCAGCAACTGCAGCAACTCCAACAACAGCAGCAGCAACAACAACAACAGCAAATCCAGCAGCAGCAGCAGCAGCAACAGCAACAGCAGCAGCAGCAGCAGCAAATTCAGCAGCAGCAACAACAAATGGGCTCTCCGTTACAGCAGGCGGCACAGGTGGGCTCACCTGCTGGTTCGCAGCAGTCATTGGTGATGTCGCAGCATCAGCAAATAAGCCCACAGCAAATGGCCGCGATGAGTCCACAGCTGAGCTCAGGCACCATGCAGCAAGTGAAT AACAATGTTATCAACCACGTAGCCACACCAGGCCCTCCTCCTAGCCCGCAGCTCAGCTCACAGA CCCAT GGGTCGGTCAACAGCATCGCAAACTCCCCAAT GGAGCAGTTGCAAGGTGCCAATAAAGGAGGTCCA GGGAGCATGTAGTGACGGCAAATAATT GTTTCTGTGATGGACATACAAAATAATGCAAGGTATAAATATCGGCAGTGATCAGCACTTTTTCTTATTTGTTGTGGTAAATGATGTTAAAGTTAGGTGTCCTGTAAGTTATAG CCAATAGATGAAGATATTATGGAGGATCAGCCTTACG CA GGGATTTCTGATGTTGTAGATTTTAGATAATGAAATTAGTACCTTTAGGGGATTGGTACTGATGAAAGTTTTGTTCAATGGGACTACTTTCTTGTTTAAATTAATTATCAAGTTTGTGTAATAGCTATGTACCCGTAGGGCTTATTAATAAGTATCTTCATTTGATTGTGGA ] [-] EMBL CB668309 [ TGGGTCCACCAAAGATGCCAGGCAGTAATTACCCGTTGACTCCGCAACAGCAAATGCAACTCCAGCAACAGTTCCAACAGAACCCGCTGCAGCAGCAGCAACTGCAGCAACTCCAACAACAGCAGCAGCAACAACAACAACAGCAAATCCAGCAGCAGCAGCAGCAGCAACAGCAACAGCAGCAGCAGCAGCAGCAAATTCAGCAGCAGCAACAACAAATGGGCTCTCCGTTACAGCAGGCGGCACAGGTGGGCTCACCTGCTGGTTCGCAGCAGTCATTGGTGATGTCGCAGCATCAGCAAATAAGCCCACAGCAAATGGCCGCGATGAGTCCACAGCTGAGCTCAGGCACCATGCAGCAAGTGAAT AACAATGTTATCAACCACGTAGCCACACCAGGCCCTCCTCCTAGCCCGCAGCTCAGCTCACAGA CCCAT GGGTCGGTCAACAGCATCGCAAACTCCCCAAT GGAGCAGTTGCAAGGTGCCAATAAAGGAGGTCCA GGGAGCATGTAGTGACGGCAAATAATT GTTTCTGTGATGGACATACAAAATAATGCAAGGTATAAATATCGGCAGTGATCAGCACTTTTTCTTATTTGTTGTGGTAAATGATGTTAAAGTTAGGTGTCCTGTAAGTTATAG CCAATAGATGAAGATATTATGGAGGATCAGCCTTACG CA GGGATTTCTGATGTTGTAGATTTTAGATAATGAAATTAGTACCTTTAGGGGATTGGTACTGATGAAAGTTTTGTTCAATGGGAGGGCTTTCTTGTTTAAATTAATTATCAAGTTTG GTAAaaaaagga ] [-] EMBL CB631742 [ CTGCTGGTTTGCAGCAGTCATTGGTGATGTCGCAGCCTCAGCAAATAAGCCCCCCGCAAATGGCCGCGATGAGTCCCCAGCTGAGCTCAGGCCCCCTGCAGCAAGTGAAT AACAATGTTATTAACCACGTAGCCACCCCAGGCCCTCCTCCTAGCCCGCAGGTCAGTTCACAGA CCCAT GGGTCGGTCAACAGCATCGCAAACTCCCCAAT GGAGCAGTTGCAAGGTGCCAATAAAGGAGGTCCA GGGAGCATGTAGTGACGGCAAATAATT GTTTTTGTGATGGGCATACAAAATAATGCAAGGTATAAATATCGGCAGGGATCAGCCCTTTTTTTTTTTTGTTGTGGTAAATGAAGTTAAAGTTAGGTGTCCTGTAAGTTATAG CCAATAGATGAAGATATTATGGAGGATCACCCCTCCC CA GGGATTTTTGATGTTGTAGATTTTAGATAAAGAAATTAGTCCCTTTAGGGGATTGGTACTGATGAAAGTTTTGTTCAATGGGACTACTTTTTTGTTTAAATTAATTATCAAGTTTGTGTAATAGCTATGTAACCGTGGGGCTTATTAATAAGTATTTTCGTTT ] [+] EMBL BI805233 [ GTCCACAGCTGAGCTCAGGCACCATGCAGCAAGTGAATGAACAATGTTATCAACCACGTAGCCACACCAGGCCCTCCTCCTAGCCCGCAGCTCAGCTCACAGA CCCAT GGGTCGGTCAACAGCATCGCAAACTCCCCAAT GGAGCAGTTGCAAGGTGCCAATAAAGGAGGTCCACGGGAGCATGTAGTGACGGCAAATAATT GTTTCTGTGATGGACATACCAAATAATGCAAGGTATAAATATCGGCAGTGATCAGCACTTTTTCTTATTTGTTGTGGTAAATGATGTTAAAGTTAGGTGTCCTGTAAGTTATAG CC ATAGATGAAGATATTATGGAGGATCAGCCTTACGCCACGGGATTTCTGATGTTGTAGATTTTAGATAATGAAATTAGTACCTTTAGGGGATTGGTACTGATGAAAGTTTTGTTCAATGGGACTACTTTCTTGTTTAAATTAATTATCAAGTTTGTGTAATAGCTATGTAACCGTGGTGCTTATTAATAAGTATCTTCATTTGATTGTGAAAAAAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||