cluster # 1212

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Oryza sativa
cluster # 1212 cluster # 1212 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_1212#0 length = 941 sequences # 2

consensusID : consensus_1212#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 941
fasta sequence

                              [GCTACCTAACGGCATGACAGTGTTTTTTTTTTTTTTTTTCTTGCATATCAATCTTAGTGAACATCAGCTCCGTGAATAACAGAAGTATGATCTGAGTACAAAAGGTCGTTTTATTTACTAGGCTTTGCCAACTTTATGTGATGAAACGGCAAGCCAGTACACAGTGCTATATCGATACAATCCGACAAGCTCTTTGTAAAGCAGCGAGAGAGACTCATCACTGATCACGGTTCACTTATAACAACAGGCTATATTGTAGCTAGCTGATAGAGGAAATGAGCTTAGTGGTGTCCGTTGCCTCCGCCAGAGCCAGAGCCATATCCAGAGCCAGAGCCAGAGCCGGAGCCTCCACCTTGGCCTCCACCGCCACCGCCACCGCCACCACTTCCATAACCACCACCATGAGCACCACCAGCACCCGACCCATAGCCGGAACCATAGCCAGACCCTTGCCCGTAGCCGCCAGCACCACCACCTTGGCCACCACCACCTCCGCCACACTACCATACCCGCCAGCACCACCAACACCTGCACCATAGCCAGAGCCTTGCCCAGACCCATAGCCAGAGCCGGAGCCACCACCCTCACCACCACCGCCGCCGCCGCCTCCACCACGCCCATACCCGCCACCGGCAGCACCTCCACTACCACCTCCCTCACCATACCCAGAACCAGAACCATAGCCCGATCCACCGTAACCACCACCGCCTCCTTCACCACCACCACCACCTCCACCTCCTCCTCCGGGGCCATAACCTAGGAGGGTTCTTGCACTGGTGGTCATACCAATGCTAAGGAGAGGGGAAAGGGGAAAAATGGAATCCTCTCATCGAGGCAAGCTCGATGGCGCGAGGTATTGGCCGGTATTACTCCGGTGAGGGAGATCGGCCAATGATGGTGGTGGCCGGTAATGGCCAGGAGAGAAGGAGCTCGGAGAGCTC]

[+] EMBL CF320198             [GCTACCTAACGGCATGACAGTGTTTTTTTTTTTTTTTTTCTTGCATATCAATCTTAGTGAACATCAGCTCCGTGAATAACAGAAGTATGATCTGAGTACAAAAGGTCGTTTTATTTACTAGGCTTTGCCAACTTTATGTGATGAAACGGCAAGCCAGTACACAGTGCTATATCGATACAATCCGACAAGCTCTTTGTAAAGCAGCGAGAGAGACTCATCACTGATCACGGTTCACTTATAACAACAGGCTATATTGTAGCTAGCTGATAGAGGAAATGAGCTTAGTGGTGTCCGTTGCCTCCGCCAGAGCCAGAGCCATATCCAGAGCCAGAGCCAGAGCCGGAGCCTCCACCTTGGCCTCCACCGCCACCGCCACCGCCACCACTTCCATAACCACCACCATGAGCACCACCAGCACCCGACCCATAGCCGGAACCATAGCCAGACCCTTGCCCGTAGCCGCCAGCACCACCACCTTGGCCACCACCACCTCCGCCACACTACCATACCCGCCAGCACCACCAACACCTGCACCATAGCCAGAGCCTTGCCCAGACCCATAGCCAGAGCCGGAGCCACCACCCTCACCACCACCGCCGCCGCCGCCTCCACCACGCCCATACCCGCCACCGGCAGCACCTCCACTACCACCTCCCTCACCATACCCAGAACCAGAACCATAGCCCGATCCACCGT                                                                                                                                                                                                                                                     ]
[-] EMBL CF321103             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CAGAGCCTTGCCCAGACCCATAGCCAGAGCCGGAGCCACCACCCTCACCACCACCGCCGCCGCCGCCTCCACCACGCCCATACCCGCCACCGGCAGCACCTCCACTACCACCTCCCTCACCATACCCAGAACCAGAACCATAGCCCGATCCACCGTAACCACCACCGCCTCCTTCACCACCACCACCACCTCCACCTCCTCCTCCGGGGCCATAACCTAGGAGGGTTCTTGCACTGGTGGTCATACCAATGCTAAGGAGAGGGGAAAGGGGAAAAATGGAATCCTCTCATCGAGGCAAGCTCGATGGCGCGAGGTATTGGCCGGTATTACTCCGGTGAGGGAGATCGGCCAATGATGGTGGTGGCCGGTAATGGCCAGGAGAGAAGGAGCTCGGAGAGCTC]




>consensus_1212#0
GCTACCTAACGGCATGACAGTGTTTTTTTTTTTTTTTTTCTTGCATATCAATCTTAGTGA
ACATCAGCTCCGTGAATAACAGAAGTATGATCTGAGTACAAAAGGTCGTTTTATTTACTA
GGCTTTGCCAACTTTATGTGATGAAACGGCAAGCCAGTACACAGTGCTATATCGATACAA
TCCGACAAGCTCTTTGTAAAGCAGCGAGAGAGACTCATCACTGATCACGGTTCACTTATA
ACAACAGGCTATATTGTAGCTAGCTGATAGAGGAAATGAGCTTAGTGGTGTCCGTTGCCT
CCGCCAGAGCCAGAGCCATATCCAGAGCCAGAGCCAGAGCCGGAGCCTCCACCTTGGCCT
CCACCGCCACCGCCACCGCCACCACTTCCATAACCACCACCATGAGCACCACCAGCACCC
GACCCATAGCCGGAACCATAGCCAGACCCTTGCCCGTAGCCGCCAGCACCACCACCTTGG
CCACCACCACCTCCGCCACACTACCATACCCGCCAGCACCACCAACACCTGCACCATAGC
CAGAGCCTTGCCCAGACCCATAGCCAGAGCCGGAGCCACCACCCTCACCACCACCGCCGC
CGCCGCCTCCACCACGCCCATACCCGCCACCGGCAGCACCTCCACTACCACCTCCCTCAC
CATACCCAGAACCAGAACCATAGCCCGATCCACCGTAACCACCACCGCCTCCTTCACCAC
CACCACCACCTCCACCTCCTCCTCCGGGGCCATAACCTAGGAGGGTTCTTGCACTGGTGG
TCATACCAATGCTAAGGAGAGGGGAAAGGGGAAAAATGGAATCCTCTCATCGAGGCAAGC
TCGATGGCGCGAGGTATTGGCCGGTATTACTCCGGTGAGGGAGATCGGCCAATGATGGTG
GTGGCCGGTAATGGCCAGGAGAGAAGGAGCTCGGAGAGCTC

clustalw multiple alignements is not computed in this case