These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1218#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 3256 fasta sequence [TCTAAGCGGGCGGGCCCGGTTCCCGGGAAAAATTTGTAGTCTGGAGAGGCGTCTCAGCGACGGACGGGCCAAGTTCCCTGGAAAGGGTGCCTGGAGGGTGAGAGCCCGTCGGCCGGACCTGTTGCCCCAGAGCGCCGTCACGAGTCGGGTTGTTTGGAATGCAGCCCAAATCGGGCGGTAAACTCCGTCCAAGCTAAATACAGGCGAGAGACGATAGCGAACAAGTACCGCGAGGGAAAGATGAAAAGGACTTTGAAAAGAGAGTCAAAGAGTGCTTGAAATTG-CGGGAGGGAAGCGGATGGGGGCCGGCGATGCGCCCCGGCCGTATGCGGAACGGCTTCGGCTGGTCCG-CGATCGGCTCGGGGCGTGGACTGTTCATCGACTGCATCTTCCTCTTTGCCTTCTACGTCTCCATCCTCACCATCATGGTCGAGGTGCACCGCATCAAGGTCAAGCGTGGCCTCCGCAAGCCCAAGCTCAGCGCCGACCTTAGCCTCGACTCGGATTCGCCACCTACCAGCCCGCTCTCCGACAGCTCTGCCTCCCGCGAGCCCAGCCCCACGCCTTCCCAGCGTCCGCTCTGGCAAAAGATCTTCAAGACCGTCTTCGGCTACGCTCCCTCGGAGAAGCGTCGCAAGTCGGAGAACCCGCTCGGCCGCCTCAAGATCCTCCTCGTCACTTGCTTCCTTGTGATGCACTCGTTCAACCTCATCTCGACGCTCACAAGGCAGTCTGCCATCAGCCGTCACCATGCCACCTTCGAGCCCTCGCCTTACCAGGTCGTCGTAGAGCAGTCGCCCATCTTTGGTCCCGCCGCCTCGTCGTCCATCGCGCCTCTCCTTGCCCAGCTTTCCCTGTCTCACCCCGCCAACGTCGACCTGGTTGCGCACATCTCGGAGCCCACCATCCTTGTGCTGCTCGAGGCCAACGAGTCCGTCTCGGCGTCGCGCAGCCCGCTTGCAAGTGCAGCTCTCAACGCATCCGGAGTCTATGCACAGATCACCTCGGCAGGCGTGCGTCCCGTCCCGGTCGGTCGAAGCAGCTCGTCGCTCGCCGTCCTGGACAGCCTCATGAGCGGCTGGACCGTCATTGTCGGTGACCCTGTTATCAGCAAGTGGATGTCGCTCGCTCTCGGTATCAGCATCTTCCTCAACGCCTACTTGCTCAAGGGCATCGCCACGGGTAACGCCGCCCTCTCCGAGGGCAACGCGGCCGGTGCCGCCGCCTACGCCGCCGCTCGATTCATCGGCGCTCATCTGGACAGCGAGGCCAAGGCCATCGAAGAGCATGGTGAGCGCGTGCGACGACGATGGAGCTCGCGCGAGAACGGCAAGCCCGTCGCTCCCGTGCGTGGCAAGAGCGCAGACGGCCTCAACGACTACCACCAGCGACTCGCCCAAATGTCCGCCACTGCCGCCTCGGCCCCGCTCAACAAGCTGGCGCGCGAGAGCGACAAGATCGCTGCCTCGTCGCAGTCGACTGAGGGTGTCAACGCTGTCCCCGCCGGAGCGATTAAGCCCGATGCCATGGATGCCGTCAAGAAGTCGAACGTCGCGCCTAGCTCCGAAGGCCAAGGCGCCGTTGCCGCGCCAGAGGACCGAGCACAGCAGATCCGCCTGCAGGATGCCACCTACGTTGCGCCCAACGGCGAGACCGTCGTGCGACCCCTGGAGGAGCTTGTCGACATCTACGCGGGCGGCGCTGGCGTCTTCTTCCTCACCGACGAGGAGATCGTCACGCTCAGCCAGAATGGCAAGATCGCCGCCTACGCTTTGGAAAAGGTGCTGCAGGACCACGAACGTGCTGTGCGCGTGCGTCGTGCGCTCGTCTCGCGTGCCTCGCACACCAAGACGCTCGAGAGCTCGCTTCTGCCTCACCGCGACTACGACTACGCCAAGGTGATGGGCGCATGCTGCGAGAACGTGGTCGGCTACATGCCCATCCCCGTCGGCATCGCGGGCCCTCTCAACATTGACGGACAGGTGATGCCCATTCCCATGGCTACCACTGAGGGCACGCTGGTCGCCTCCACCTCGCGAGGCTGCAAGGCACTCAACGCTGGCGGAGGAGTGACGACCGTGCTGACGCAGGATGCCATGACGCGCGGACCCGCGCTCGAGTTCCCCAGCGTCGTGCAGGCCGCCAAGGCGAAGCGATGGATCGACTCACAGGACGGTGCTTCGACCATCAAGGCCGCTTTCGACTCGACGTCTCGATTTGCGCGACTGTCGTCGCTGCGCTGCGTGCTGGCGGGCCGCACGCTGTACGTGCGATTCGCCACCTCGACGGGTGATGCGATGGGCATGAACATGATCTCCAAGGGCGTCGAGAAGGCGCTCAGCTTGATGACCGAGGAGCACTTCCCAGAGATGAAGGTCCTTTCCCTCTCGGGCAACTACTGCACGGATAAGAAGCCGGCGGCGATCAACTGGATCGAGGGCCGCGGCAAGAGTGTAGTTGCCGAGGCGGTGGTGCCTGGCAGCGTGGTGAAGTCGGTGCTCAAGTGCACGGTGCGCGATCTGGTCAATCTCAACACCAAGAAGAACCTCATCGGGTCGGCCATGGCTGGATCCGTGGGTGGCTTCAACGCACACGCGGCCAACATTCTGACGGCCATCTATCTGGCGACGGGACAGGACCCGGCGCAGAACGTCGAGTCGTCGAACTGCATCACGCTCATGGAGGCGATCAACGACGACCAGGACCTGCTCATCACGGTGTCGATGCCGAGCATCGAGGTGGGCACGGTGGGTGGTGGTACGGTACTGCCGCCGCAGCGCTCGATGCTCGAGATGATGGGCATTGCGGGTGCGCACGCGACGACGCCCGGTGCGAATGCGCAGAGATTGGCGCGCATCATTGCGGCGTCGGTGATGGCGGGCGAGCTGTCGCTGATGGGCGCGCTGTGCGCGGGTCACCTGATCCAGGCACACATGAAGCACAACCGATCCGTGCCGTCGACGCCAGGCACCATGACGCCGCTGCCGCGACCCGAGACGCCCAAGCACTTTGCCGCCTCGATGACGCCGCTCGTGGCGCCGCCCGTGGGACAGTCGAATCGCGGCTCGCCCACAGGCAACCGCTCCATCTCGATGACCAACCTCGCCATCCCCGCGTCCGATAGCACCGGTCGTGCGGCGTCGCTCTCGTCGAACCAATGATTGTACTCGTGTCCTCAGGCGAGAGCCTGACCACTGTAAATACCAAAACACGCACACACACATGCTTACTACACTTTAGAAACAAGGACATGCTT] [-] EMBL BI799837 [TCTAAGCGGGCGGGCCCGGTTCCCGGGAAAAATTTGTAGTCTGGAGAGGCGTCTCAGCGACGGACGGGCCAAGTTCCCTGGAAAGGGTGCCTGGAGGGTGAGAGCCCGTCGGCCGGACCTGTTGCCCCAGAGCGCCGTCACGAGTCGGGTTGTTTGGAATGCAGCCCAAATCGGGCGGTAAACTCCGTCCAAGCTAAATACAGGCGAGAGACGATAGCGAACAAGTACCGCGAGGGAAAGATGAAAAGGACTTTGAAAAGAGAGTCAAAGAGTGCTTGAAATTG CGGGAGGGAAGCGGATGGGGGCCGGCGATGCGCCCCGGCCGTATGCGGAACGGCTTCGGCTGGTCCG CGATCG ] [+] EMBL AK110180 [ GAGTCAAAGAGTGCTTGAAATTGCCGGGAGGGAAGCGGATGGGGGCCGGCGATGCGCCCCGGCCGTATGCGGAACGGCTTCGGCTGGTCCGCCGATCGGCTCGGGGCGTGGACTGTTCATCGACTGCATCTTCCTCTTTGCCTTCTACGTCTCCATCCTCACCATCATGGTCGAGGTGCACCGCATCAAGGTCAAGCGTGGCCTCCGCAAGCCCAAGCTCAGCGCCGACCTTAGCCTCGACTCGGATTCGCCACCTACCAGCCCGCTCTCCGACAGCTCTGCCTCCCGCGAGCCCAGCCCCACGCCTTCCCAGCGTCCGCTCTGGCAAAAGATCTTCAAGACCGTCTTCGGCTACGCTCCCTCGGAGAAGCGTCGCAAGTCGGAGAACCCGCTCGGCCGCCTCAAGATCCTCCTCGTCACTTGCTTCCTTGTGATGCACTCGTTCAACCTCATCTCGACGCTCACAAGGCAGTCTGCCATCAGCCGTCACCATGCCACCTTCGAGCCCTCGCCTTACCAGGTCGTCGTAGAGCAGTCGCCCATCTTTGGTCCCGCCGCCTCGTCGTCCATCGCGCCTCTCCTTGCCCAGCTTTCCCTGTCTCACCCCGCCAACGTCGACCTGGTTGCGCACATCTCGGAGCCCACCATCCTTGTGCTGCTCGAGGCCAACGAGTCCGTCTCGGCGTCGCGCAGCCCGCTTGCAAGTGCAGCTCTCAACGCATCCGGAGTCTATGCACAGATCACCTCGGCAGGCGTGCGTCCCGTCCCGGTCGGTCGAAGCAGCTCGTCGCTCGCCGTCCTGGACAGCCTCATGAGCGGCTGGACCGTCATTGTCGGTGACCCTGTTATCAGCAAGTGGATGTCGCTCGCTCTCGGTATCAGCATCTTCCTCAACGCCTACTTGCTCAAGGGCATCGCCACGGGTAACGCCGCCCTCTCCGAGGGCAACGCGGCCGGTGCCGCCGCCTACGCCGCCGCTCGATTCATCGGCGCTCATCTGGACAGCGAGGCCAAGGCCATCGAAGAGCATGGTGAGCGCGTGCGACGACGATGGAGCTCGCGCGAGAACGGCAAGCCCGTCGCTCCCGTGCGTGGCAAGAGCGCAGACGGCCTCAACGACTACCACCAGCGACTCGCCCAAATGTCCGCCACTGCCGCCTCGGCCCCGCTCAACAAGCTGGCGCGCGAGAGCGACAAGATCGCTGCCTCGTCGCAGTCGACTGAGGGTGTCAACGCTGTCCCCGCCGGAGCGATTAAGCCCGATGCCATGGATGCCGTCAAGAAGTCGAACGTCGCGCCTAGCTCCGAAGGCCAAGGCGCCGTTGCCGCGCCAGAGGACCGAGCACAGCAGATCCGCCTGCAGGATGCCACCTACGTTGCGCCCAACGGCGAGACCGTCGTGCGACCCCTGGAGGAGCTTGTCGACATCTACGCGGGCGGCGCTGGCGTCTTCTTCCTCACCGACGAGGAGATCGTCACGCTCAGCCAGAATGGCAAGATCGCCGCCTACGCTTTGGAAAAGGTGCTGCAGGACCACGAACGTGCTGTGCGCGTGCGTCGTGCGCTCGTCTCGCGTGCCTCGCACACCAAGACGCTCGAGAGCTCGCTTCTGCCTCACCGCGACTACGACTACGCCAAGGTGATGGGCGCATGCTGCGAGAACGTGGTCGGCTACATGCCCATCCCCGTCGGCATCGCGGGCCCTCTCAACATTGACGGACAGGTGATGCCCATTCCCATGGCTACCACTGAGGGCACGCTGGTCGCCTCCACCTCGCGAGGCTGCAAGGCACTCAACGCTGGCGGAGGAGTGACGACCGTGCTGACGCAGGATGCCATGACGCGCGGACCCGCGCTCGAGTTCCCCAGCGTCGTGCAGGCCGCCAAGGCGAAGCGATGGATCGACTCACAGGACGGTGCTTCGACCATCAAGGCCGCTTTCGACTCGACGTCTCGATTTGCGCGACTGTCGTCGCTGCGCTGCGTGCTGGCGGGCCGCACGCTGTACGTGCGATTCGCCACCTCGACGGGTGATGCGATGGGCATGAACATGATCTCCAAGGGCGTCGAGAAGGCGCTCAGCTTGATGACCGAGGAGCACTTCCCAGAGATGAAGGTCCTTTCCCTCTCGGGCAACTACTGCACGGATAAGAAGCCGGCGGCGATCAACTGGATCGAGGGCCGCGGCAAGAGTGTAGTTGCCGAGGCGGTGGTGCCTGGCAGCGTGGTGAAGTCGGTGCTCAAGTGCACGGTGCGCGATCTGGTCAATCTCAACACCAAGAAGAACCTCATCGGGTCGGCCATGGCTGGATCCGTGGGTGGCTTCAACGCACACGCGGCCAACATTCTGACGGCCATCTATCTGGCGACGGGACAGGACCCGGCGCAGAACGTCGAGTCGTCGAACTGCATCACGCTCATGGAGGCGATCAACGACGACCAGGACCTGCTCATCACGGTGTCGATGCCGAGCATCGAGGTGGGCACGGTGGGTGGTGGTACGGTACTGCCGCCGCAGCGCTCGATGCTCGAGATGATGGGCATTGCGGGTGCGCACGCGACGACGCCCGGTGCGAATGCGCAGAGATTGGCGCGCATCATTGCGGCGTCGGTGATGGCGGGCGAGCTGTCGCTGATGGGCGCGCTGTGCGCGGGTCACCTGATCCAGGCACACATGAAGCACAACCGATCCGTGCCGTCGACGCCAGGCACCATGACGCCGCTGCCGCGACCCGAGACGCCCAAGCACTTTGCCGCCTCGATGACGCCGCTCGTGGCGCCGCCCGTGGGACAGTCGAATCGCGGCTCGCCCACAGGCAACCGCTCCATCTCGATGACCAACCTCGCCATCCCCGCGTCCGATAGCACCGGTCGTGCGGCGTCGCTCTCGTCGAACCAATGATTGTACTCGTGTCCTCAGGCGAGAGCCTGACCACTGTAAATACCAAAACACGCACACACACATGCTTACTACACTTTAGAAACAAGGACATGCTT] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||