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Oryza sativa
cluster # 12399 cluster # 12399       Sequences # 10       consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12399#0 length = 3037 sequences # 8  
 consensus_12399#1 length = 550 sequences # 1  
consensus_12399#2 length = 454 sequences # 1  
consensusID : consensus_12399#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 3037
fasta sequence 
                              [ATCCTCCTCGCCGCGGCGGAGCACTAAACCCTAGCGAGAGATGCCGTCGCCTGCGGGGGGTCCGGTGGCCGTGGCGGCGGCGTCTGCGGCGGCGGCGGAGGCGCTGGGGATCTCGCCGGAGATGTACCCGACGGAGGACGACCTGGCGTACGAGGAGGAGATCCTGCGCGAGCCGTTCAAGCTCAAGGGGTGGTGGCGCTACCTCGTCGCCCGCGCCGCCGCGCCGTTCGCCAAGCGCGCCGTCATCTACGAGCGCGCGCTCAAGGCGCTCCCGGGGAGCTACAAGCTGTGGCACGCCTACCTCCGCGAGCGCCTCGACCACGCGCGCCCGCACCCCATCTCCCACCACGCCTACGCCTCCCTCAACAACACCTTCGAGCGCGCCCTCGCCACCATGCACAAGATGCCCCGCGTCTGGGTGCTCTACCTCACCTCGCTGCTCGACCAGCGCCTGCTCACGCGCGCGCGCCGCGCCTTCGACCGCGCGCTGCGCGCGCTCCCCGTCACGCAGCACGACCGCATCTGGCCGCTCTACCTCCGCCTCGCCTCGCTCCCGGCCTGCCCCGTCGAGACCTCGCTCCGCGTCTTCCGACGATACCTCCAGTACGACCCCTCCCACGCTGAGGACTTCATCGATTTCCTCATCTCCGCAAACCGCTGGCAGGAGGCCGCCGACCGCCTCGCGTCCGTGCTCAACGATGACGGCTTCCGCTCCGTCAAGGGTAAGACCCAGCACCAGCTCTGGCTTGAGCTCTGCGAAATCCTCACCAAGCATGCCGATGAGGTTGCGGGGCTCAAGGTGGACGCTATACTGCGGGGCGGCATTCGCAAGTTCACCGATGAGGTTGGCAAGCTGTGGACCTCCCTGGCCGATTACTACGTCAGAAGAACCTTGTATGAGAAGGCGAGGGATGTCTTCGAAGAGGGGGTTGCTTCGGTGATGACGGTGCAGGAATTCAGCGTGGTGTTTGAGGCGTACACACAATTCGAGCAGAGTATGCTTGCGGCAAAGCTGGAGGCAGCCGAGGAGGAGGGTGCGGGGAGTGAGGGGGAAGAGGAAGCGGGCAGGAAGAATGGGATGGACAAGCTGTCGAAGAAATTCCTCGCAGATTGCTGGCTGAATGATGAGGATGATACTGATTTGAGGCTGGCAAGGTTTGAGCGGCTGTTGGATCGCCGGCCAGAGCTCCTCAGCAGTGTCCTGCTGCGACAGAATCCGCATAATGTGGAGGAATGGCACAGGAGGGTGAAACTTTTTGAGAAGGATCCTACAAGGCAAGTAGCCACATATGTTGAAGCTGTGAAAACCGTAGACCCTATGAAGGCAGCTGGAAAACCACATACTCTATGGGTGGCATTCGCAAAGATGTATGAGAAACATAATCGTCTAGATAGTGCTGAAGAGATCTTTAAAAAAGCAACACAGGTGAACTACAAGGCAGTTGACCACTTAGCCAGTATTTGGTGTGAGTGGGCAGAGATGGAGCTGAGGCACAGTAATTTTGACAAGGCTATTGAGCTGATGAGGCAAGCTACTGCAGAACCCTCTGTTGAGGTTAAGAGGCGAGCTGCTGCTGAGGGGGATGAACCTGTCCAATTGAAAGTACATAAATCCCTGAAACTGTGGAGCTTCTATGTGGACCTGGAGGAAAGTCTTGGAACATTGGAATCAACTCGTGCAGTTTATGAGAGAATATTGGATTTACGAATTGCCACTCCCCAAATAGTTCTCAATTATGCATATCTTCTTGAGGAAAACAAGTATTTCGAAGATGC-GTTTAAAGTGTATGAGCGTGGTGTGAAAATTTTTAAATATCCCCA-TGTTAAAGACATTTGGGTGACCTACCTCACAAAGTTTGTAAGAAGGTATCAGAGAAGCAAGTTAGAGCGGGCAAGAGAACTGTTCGATGAAGCTGTCAAACAGGCTCCTCCACAAGAAAAGAAGGTATTGTATTTGCAGTATGCTAAGCTGGAGGAAGACTATGGCCTTGCGAAACGTGCAATGAATGTATACGACGAAGCTGTAAGGGCTGTTCCTAACAGCGAAAAGATGAGTATGTACGAAATATATATTGCACGGGCTGCGGAGCTATTTGGTGTTCCAAGAACAAGACAGATATATGAGCAAGCAATTGAATCTGGACTCCCAGACAGAGATGTCATGACAATGTGCATGAAATTTGCAGAACTTGAAAGAAACCTTGGAGAAATTGATCGTGCCCGTGCCATTTATGTCCACGCATCCAACTATGCTGATCCAAACTCTCATCCTGAATTTTGGAATAAATGGAATGAATTTGAGATTCAGCATGGTAACGAAGATACATTCAGGGAGATGCTTCGCATCAAGCGTACTGTGGCTGCTAGCCGCAGTCAGACTCATTTCATACTCCCAGAGTACTTGATGCAGAGGGACCAGAGGCTGAACCTCGATGAGGCAGTTGACACTCTGAAACGAGCCGGTGTTCCTGAGGATGAGATGGCTAACCTAGAAAGGCAACTAGCGCCAGGACCTTCCACGGCTCCACCAGCTCCAAGCACTGCTACTGCTCCTGCTAACCGGATGATGAACTTTGTCAGTGCTGGAGTGCAGGCACAGGCTGAGAGCAGCAGCAGGCAACAACAGGCTGCTGCTACTAACAATGAGGACATTGAGCTGCCCGATGAGAGCGACGAGGAGGAAGACGATGTCCAAATTGCGGAGAAGAGTGTTCCCGCTGCGGTGTTTGGAGAGCTCGGCAAGAGAGCTGCAGAGAACAGGGAGGAGGAAAGCTCTGGTGCCCAGGAGAATGAGCAGCTTGGCGCCCTTGAGAGGATTAAGCGAAGGCGTCAATGATCTGCCACTGTCAAGATGCCCACACCATTAGCTGGTGCCCTTAACGATGTTGTAGCTGTAACAACTTGTAAACATGATTTTGAGTGGTGTTTTTGCTCTTGTACAAGAATTTACGGGAGTTATTAATCCGTTGTTGATCTGCGACCATTTTTTCGTGTACTAACTATTGGGTACATTCCCCGCTTTTTATTCCCTCTTTTA]

[+] EMBL AK066726             [ATCCTCCTCGCCGCGGCGGAGCACTAAACCCTAGCGAGAGATGCCGTCGCCTGCGGGGGGTCCGGTGGCCGTGGCGGCGGCGTCTGCGGCGGCGGCGGAGGCGCTGGGGATCTCGCCGGAGATGTACCCGACGGAGGACGACCTGGCGTACGAGGAGGAGATCCTGCGCGAGCCGTTCAAGCTCAAGGGGTGGTGGCGCTACCTCGTCGCCCGCGCCGCCGCGCCGTTCGCCAAGCGCGCCGTCATCTACGAGCGCGCGCTCAAGGCGCTCCCGGGGAGCTACAAGCTGTGGCACGCCTACCTCCGCGAGCGCCTCGACCACGCGCGCCCGCACCCCATCTCCCACCACGCCTACGCCTCCCTCAACAACACCTTCGAGCGCGCCCTCGCCACCATGCACAAGATGCCCCGCGTCTGGGTGCTCTACCTCACCTCGCTGCTCGACCAGCGCCTGCTCACGCGCGCGCGCCGCGCCTTCGACCGCGCGCTGCGCGCGCTCCCCGTCACGCAGCACGACCGCATCTGGCCGCTCTACCTCCGCCTCGCCTCGCTCCCGGCCTGCCCCGTCGAGACCTCGCTCCGCGTCTTCCGACGATACCTCCAGTACGACCCCTCCCACGCTGAGGACTTCATCGATTTCCTCATCTCCGCAAACCGCTGGCAGGAGGCCGCCGACCGCCTCGCGTCCGTGCTCAACGATGACGGCTTCCGCTCCGTCAAGGGTAAGACCCAGCACCAGCTCTGGCTTGAGCTCTGCGAAATCCTCACCAAGCATGCCGATGAGGTTGCGGGGCTCAAGGTGGACGCTATACTGCGGGGCGGCATTCGCAAGTTCACCGATGAGGTTGGCAAGCTGTGGACCTCCCTGGCCGATTACTACGTCAGAAGAACCTTGTATGAGAAGGCGAGGGATGTCTTCGAAGAGGGGGTTGCTTCGGTGATGACGGTGCAGGAATTCAGCGTGGTGTTTGAGGCGTACACACAATTCGAGCAGAGTATGCTTGCGGCAAAGCTGGAGGCAGCCGAGGAGGAGGGTGCGGGGAGTGAGGGGGAAGAGGAAGCGGGCAGGAAGAATGGGATGGACAAGCTGTCGAAGAAATTCCTCGCAGATTGCTGGCTGAATGATGAGGATGATACTGATTTGAGGCTGGCAAGGTTTGAGCGGCTGTTGGATCGCCGGCCAGAGCTCCTCAGCAGTGTCCTGCTGCGACAGAATCCGCATAATGTGGAGGAATGGCACAGGAGGGTGAAACTTTTTGAGAAGGATCCTACAAGGCAAGTAGCCACATATGTTGAAGCTGTGAAAACCGTAGACCCTATGAAGGCAGCTGGAAAACCACATACTCTATGGGTGGCATTCGCAAAGATGTATGAGAAACATAATCGTCTAGATAGTGCTGAAGAGATCTTTAAAAAAGCAACACAGGTGAACTACAAGGCAGTTGACCACTTAGCCAGTATTTGGTGTGAGTGGGCAGAGATGGAGCTGAGGCACAGTAATTTTGACAAGGCTATTGAGCTGATGAGGCAAGCTACTGCAGAACCCTCTGTTGAGGTTAAGAGGCGAGCTGCTGCTGAGGGGGATGAACCTGTCCAATTGAAAGTACATAAATCCCTGAAACTGTGGAGCTTCTATGTGGACCTGGAGGAAAGTCTTGGAACATTGGAATCAACTCGTGCAGTTTATGAGAGAATATTGGATTTACGAATTGCCACTCCCCAAATAGTTCTCAATTATGCATATCTTCTTGAGGAAAACAAGTATTTCGAAGATGC GTTTAAAGTGTATGAGCGTGGTGTGAAAATTTTTAAATATCCCCA TGTTAAAGACATTTGGGTGACCTACCTCACAAAGTTTGTAAGAAGGTATCAGAGAAGCAAGTTAGAGCGGGCAAGAGAACTGTTCGATGAAGCTGTCAAACAGGCTCCTCCACAAGAAAAGAAGGTATTGTATTTGCAGTATGCTAAGCTGGAGGAAGACTATGGCCTTGCGAAACGTGCAATGAATGTATACGACGAAGCTGTAAGGGCTGTTCCTAACAGCGAAAAGATGAGTATGTACGAAATATATATTGCACGGGCTGCGGAGCTATTTGGTGTTCCAAGAACAAGACAGATATATGAGCAAGCAATTGAATCTGGACTCCCAGACAGAGATGTCATGACAATGTGCATGAAATTTGCAGAACTTGAAAGAAACCTTGGAGAAATTGATCGTGCCCGTGCCATTTATGTCCACGCATCCAACTATGCTGATCCAAACTCTCATCCTGAATTTTGGAATAAATGGAATGAATTTGAGATTCAGCATGGTAACGAAGATACATTCAGGGAGATGCTTCGCATCAAGCGTACTGTGGCTGCTAGCCGCAGTCAGACTCATTTCATACTCCCAGAGTACTTGATGCAGAGGGACCAGAGGCTGAACCTCGATGAGGCAGTTGACACTCTGAAACGAGCCGGTGTTCCTGAGGATGAGATGGCTAACCTAGAAAGGCAACTAGCGCCAGGACCTTCCACGGCTCCACCAGCTCCAAGCACTGCTACTGCTCCTGCTAACCGGATGATGAACTTTGTCAGTGCTGGAGTGCAGGCACAGGCTGAGAGCAGCAGCAGGCAACAACAGGCTGCTGCTACTAACAATGAGGACATTGAGCTGCCCGATGAGAGCGACGAGGAGGAAGACGATGTCCAAATTGCGGAGAAGAGTGTTCCCGCTGCGGTGTTTGGAGAGCTCGGCAAGAGAGCTGCAGAGAACAGGGAGGAGGAAAGCTCTGGTGCCCAGGAGAATGAGCAGCTTGGCGCCCTTGAGAGGATTAAGCGAAGGCGTCAATGATCTGCCACTGTCAAGATGCCCACACCATTAGCTGGTGCCCTTAACGATGTTGTAGCTGTAACAACTTGTAAACATGATTTTGAGTGGTGTTTTTGCTCTTGTACAAGAATTTACGGGAGTTATTAATCCGTTGTTGATCTGCGACCATTTTTTCGTGTACTAACTATTGGGTACATTCCCCGCTTTTTATTCCCTCTTTTA]
[+] EMBL AK101483             [ TCCTCCTCGCCGCGGCGGAGCACTAAACCCTAGCGAGAGATGCCGTCGCCTGCGGGGGGTCCGGTGGCCGTGGCGGCGGCGTCTGCGGCGGCGGCGGAGGCGCTGGGGATCTCGCCGGAGATGTACCCGACGGAGGACGACCTGGCGTACGAGGAGGAGATCCTGCGCGAGCCGTTCAAGCTCAAGGGGTGGTGGCGCTACCTCGTCGCCCGCGCCGCCGCGCCGTTCGCCAAGCGCGCCGTCATCTACGAGCGCGCGCTCAAGGCGCTCCCGGGGAGCTACAAGCTGTGGCACGCCTACCTCCGCGAGCGCCTCGACCACGCGCGCCCGCACCCCATCTCCCACCACGCCTACGCCTCCCTCAACAACACCTTCGAGCGCGCCCTCGCCACCATGCACAAGATGCCCCGCGTCTGGGTGCTCTACCTCACCTCGCTGCTCGACCAGCGCCTGCTCACGCGCGCGCGCCGCGCCTTCGACCGCGCGCTGCGCGCGCTCCCCGTCACGCAGCACGACCGCATCTGGCCGCTCTACCTCCGCCTCGCCTCGCTCCCGGCCTGCCCCGTCGAGACCTCGCTCCGCGTCTTCCGACGATACCTCCAGTACGACCCCTCCCACGCTGAGGACTTCATCGATTTCCTCATCTCCGCAAACCGCTGGCAGGAGGCCGCCGACCGCCTCGCGTCCGTGCTCAACGATGACGGCTTCCGCTCCGTCAAGGGTAAGACCCAGCACCAGCTCTGGCTTGAGCTCTGCGAAATCCTCACCAAGCATGCCGATGAGGTTGCGGGGCTCAAGGTGGACGCTATACTGCGGGGCGGCATTCGCAAGTTCACCGATGAGGTTGGCAAGCTGTGGACCTCCCTGGCCGATTACTACGTCAGAAGAACCTTGTATGAGAAGGCGAGGGATGTCTTCGAAGAGGGGGTTGCTTCGGTGATGACGGTGCAGGAATTCAGCGTGGTGTTTGAGGCGTACACACAATTCGAGCAGAGTATGCTTGCGGCAAAGCTGGAGGCAGCCGAGGAGGAGGGTGCGGGGAGTGAGGGGGAAGAGGAAGCGGGCAGGAAGAATGGGATGGACAAGCTGTCGAAGAAATTCCTCGCAGATTGCTGGCTGAATGATGAGGATGATACTGATTTGAGGCTGGCAAGGTTTGAGCGGCTGTTGGATCGCCGGCCAGAGCTCCTCAGCAGTGTCCTGCTGCGACAGAATCCGCATAATGTGGAGGAATGGCACAGGAGGGTGAAACTTTTTGAGAAGGATCCTACAAGGCAAGTAGCCACATATGTTGAAGCTGTGAAAACCGTAGACCCTATGAAGGCAGCTGGAAAACCACATACTCTATGGGTGGCATTCGCAAAGATGTATGAGAAACATAATCGTCTAGATAGTGCTGAAGAGATCTTTAAAAAAGCAACACAGGTGAACTACAAGGCAGTTGACCACTTAGCCAGTATTTGGTGTGAGTGGGCAGAGATGGAGCTGAGGCACAGTAATTTTGACAAGGCTATTGAGCTGATGAGGCAAGCTACTGCAGAACCCTCTGTTGAGGTTAAGAGGCGAGCTGCTGCTGAGGGGGATGAACCTGTCCAATTGAAAGTACATAAATCCCTGAAACTGTGGAGCTTCTATGTGGACCTGGAGGAAAGTCTTGGAACATTGGAATCAACTCGTGCAGTTTATGAGAGAATATTGGATTTACGAATTGCCACTCCCCAAATAGTTCTCAATTATGCATATCTTCTTGAGGAAAACAAGTATTTCGAAGATGC GTTTAAAGTGTATGAGCGTGGTGTGAAAATTTTTAAATATCCCCA TGTTAAAGACATTTGGGTGACCTACCTCACAAAGTTTGTAAGAAGGTATCAGAGAAGCAAGTTAGAGCGGGCAAGAGAACTGTTCGATGAAGCTGTCAAACAGGCTCCTCCACAAGAAAAGAAGGTATTGTATTTGCAGTATGCTAAGCTGGAGGAAGACTATGGCCTTGCGAAACGTGCAATGAATGTATACGACGAAGCTGTAAGGGCTGTTCCTAACAGCGAAAAGATGAGTATGTACGAAATATATATTGCACGGGCTGCGGAGCTATTTGGTGTTCCAAGAACAAGACAGATATATGAGCAAGCAATTGAATCTGGACTCCCAGACAGAGATGTCATGACAATGTGCATGAAATTTGCAGAACTTGAAAGAAACCTTGGAGAAATTGATCGTGCCCGTGCCATTTATGTCCACGCATCCAACTATGCTGATCCAAACTCTCATCCTGAATTTTGGAATAAATGGAATGAATTTGAGATTCAGCATGGTAACGAAGATACATTCAGGGAGATGCTTCGCATCAAGCGTACTGTGGCTGCTAGCCGCAGTCAGACTCATTTCATACTCCCAGAGTACTTGATGCAGAGGGACCAGAGGCTGAACCTCGATGAGGCAGTTGACACTCTGAAACGAGCCGGTGTTCCTGAGGATGAGATGGCTAACCTAGAAAGGCAACTAGCGCCAGGACCTTCCACGGCTCCACCAGCTCCAAGCACTGCTACTGCTCCTGCTAACCGGATGATGAACTTTGTCAGTGCTGGAGTGCAGGCACAGGCTGAGAGCAGCAGCAGGCAACAACAGGCTGCTGCTACTAACAATGAGGACATTGAGCTGCCCGATGAGAGCGACGAGGAGGAAGACGATGTCCAAATTGCGGAGAAGAGTGTTCCCGCTGCGGTGTTTGGAGAGCTCGGCAAGAGAGCTGCAGAGAACAGGGAGGAGGAAAGCTCTGGTGCCCAGGAGAATGAGCAGCTTGGCGCCCTTGAGAGGATTAAGCGAAGGCGTCAATGATCTGCCACTGTCAAGATGCCCACACCATTAGCTGGTGCCCTTAACGATGTTGTAGCTGTAACAACTTGTAAACATGATTTTGAGTGGTGTTTTTGCTCTTGTACAAGAATTTACGGGAGTTATTAATCCGTTGTTG                                                                 ]
[+] EMBL AU181666             [                                                                                                                                                                                                                                                                                                                                                                                            GCGCCCTCGCCACCATGCACAAGATGCCCCGCGTCTGGGTGCTCTACCTCACCTCGCTGCTCGACCAGCGCCTGCTCACGCGCGCGCGCCGCGCCTTCGACCGCGCGCTGCGCGCGCTCCCCGTCACGCAGCACGACCGCATCTGGCCGCTCTACCTCCGCCTCGCCTCGCTCCCGGCCTGCCCCGTCGAGACCTCGCTCCGCGTCTTCCGACGATACCTCCAGTACGACCCCTCCCACGCTGAGGACTTCATCGATTTCCTCATCTCCGCAAACCGCTGGCAGGAGGCCGCCGACCGCCTCGCGTCCGTGCTCAACGATGACGGCTTCCGCTCCGTCAAGGGTAAGACCCAGCACCAGCTCTGGCTTGAGCTCTGCGAAATCCTCACCAAGCATGCCGATGAGGTTGCGGGGCTCAAGGTGGACGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CB631245             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               TCGCAGATTGCTGGCTGAATGATGAGGATGATACTGATTTGAGGCTGGCAAGGTTTGAGCGGCTGTTGGATCGCCGGCCAGAGCTCCTCAGCAGTGTCCTGTTGCGACAGAATCCACATAATGTGGAGGAATGGCACAGGAGGGTGAAACTTTTTGAGAAGGATCCTACAAGGCAAGTAGCCACATATGTTGAAGCTGTGAAAACCGTAGACCCTATGAAGGCAGCTGGAAAACCACATACTCTATGGGTGGCATTCGCAAAGATGTATGAGAAACATAATCGTCTAGATAGTGCTGAAGAGATCTTTAAAAAAGCAACACAGGTGAACTACAAGGCAGTTGACCACTTAGCCAGTATTTGGTGTGAATGGGCAGAGATGGAGCTGAGGCACAATAATTTTGACAAGGCTATTGAGCTGATGAGGCAAGCTACTGCAGAACCCTCTGTTGAGGTTAAGAGGCGAGCTGCTGCTGAGGGGGATGAACCTGTCCAATTGAAAGTACATAAATCTCTGAAACTGTGGAGCTTCTATGTGGACCTGGAGGAAAGTCTTGGAACATTGGAATCAACTCGTGCAGTTTATGAGAGAATATTGGATTTACGAATTGCCACTCCCCAAATAGTTCTCAATTATGCATATCTTCTTGAGGAAAACAAGTATTTTGAAGATGC GTTTAAAGTGTATGAGCGTGGTGTGAAAATTTTTAAATATCCCCA TGTTAAAGACATTTGGGTGACCTACCTCACAAAGTTTGTAAGAAGGTATCAGAGAAGCAAGTTAGAGCGGGCAAGAGAACTGTTCGATGAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CF303101             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                GATCCTACAAGGCAAGTAGCCACATATGTTGAAGCTGTGAAAACCGTAGACCCTATGAAGGCAGCTGGAAAACCACATACTCTATGGGTGGCATTCGCAAAGATGTATGAGAAACATAATCGTCTAGATAGTGCTGAAGAGATCTTTAAAAAAGCAACACAGGTGAACTACAAGGCAGTTGACCACTTAGCCAGTATTTGGTGTGAGTGGGCAGAGATGGAGCTGAGGCACAGTAATTTTGACAAGGCTATTGAGCTGATGAGGCAAGCTACTGCAGAACCCTCTGTTGAGGTTAAGAGGCGAGCTGCTGCTGAGGGGGATGAACCTGTCCAATTGAAAGTACATAAATCCCTGAAACTGTGGAGCTTCTATGTGGACCTGGAGGAAAGTCTTGGAACATTGGAATCAACTCGTGCAGTTTATGAGAGAATATTGGATTTACGAATTGCCACTCCCCAAATAGTTCTCAATTATGCATATCTTCTTGAGGAAAACAAGTATTTCGAAGATGC GTTTAAAGTGTATGAGCGTGGTGTGAAAATTTTTAAATATCCCCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CB671034             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    CACAGTAATTTTGACAAGGCTATTGAGCTGATGAGGCAAGCTACTGCAGAACCCTCTGTTGAGGTTAAGAGGCGAGCTGCTGCTGAGGGGGATGAACCTGTCCAATTGAAAGTACATAAATCCCTGAAACTGTGGAGCTTCTATGTGGACCTGGAGGAAAGTCTTGGAACATTGGAATCAACTCGTGCAGTTTATGAGAGAATATTGGATTTACGAATTGCCACTCCCCAAATAGTTCTCAATTATGCATATCTTCTTGAGGAAAACAAGTATTTCGAAGATGC GTTTAAAGTGTATGAGCGTGGTGTGAAAATTTTTAAATATCCCCA TGTTAAAGACATTTGGGTGACCTACCTCACAAAGTTTGTAAGAAGGTATCAGAGAAGCAAGTTAGAGCGGGCAAGAGAACTGTTCGATGAAGCTGTCAAACAGGCTCCTCCACAAGAAAAGAAGGTATTGTATTTGCAGTATGCTAAGCTGGAGGAAGACTATGGCCTTGCGAAACGTGCAATGAATGTATACGACGAAGCTGTAAGGGCTGTTCCTAACAGCGAAAAGATGAGTATGTACGAAATATATATTGCACGGGCTGCGGAGCTATTTGGTGTTCCAAGAACAAGACAGATATATGAGCAAGCAATTGAATCTGGACTCCCAGACAGAGATGTCATGACAATGTGCATGAAATTTGCAGAACTTGAAAGAAACCTTGGAGAAATTGATCGTGCCCGTGCCATTTATGTCCACGCATCCAACTATGCTGATCCAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL AU062694             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    CACAGTAATTTTNACAAGGCTATTGAGCTGATGAGGCAAGCTACTGCAGAACCCTCTGTTGAGGTTAAGAGGCGAGCTGCTGCTGAGGGGGATGAACCTGTCCAATTGAAAGTACATAAATCCCTGAAACTGTGGAGCTTCTATGTGGACCTGGAGGAAAGTCTTGGAACATTGGAATCAACTCGTGCAGTTTATGAGAGAATATTGGATTTACGAATTTCCACTCCCCAAATAGTTCTCAATTATGCATATCTTCTTGAGGTNAACAAGTATTTCGAAGATGCNGTTTAAAGTGTATGAGCGTGGTGTGAAAATTTTTAAATATCCCCATTGTTAAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CB631246             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ATTGATCGTGCCCGTGCCATTTATGTCCACGCATCCAACTATGCCGATCCAAACTCTCATCCTGAATTTTGGAATAAATGGAATGAATTTGAGATTCAGCATGGTAACGAAGATACATTCAGGGAGATGCTTCGCATCAAGCGTACTGTGGCTGCTAGCCGCAGTCAGACTCATTTCATACTCCCGGAGTACTTGATGCAGAGGGACCAGAGGCTGAACCTCGATGAGGCAGTTGACACTCTGAAACGAGCCGGTGTTCCTGAGGATGAGATGGCTAACCTAGAAAGGCAACTAGCGCCAGGACCTTCCACGGCTCCACCAGTTCCAAGCACTGCTACTGCTCCTGCTAACCGGATGATGAACTTTGTCAGTGCTGGAGTGCAGGCACAGGCTGAGAGCAGCAGCAGGCAACAACAGGCTGCTGCTGCTAACAATGAGGACATTGAGCTGCCCGATGAGAGCGACGAGGAGGAAGACGATGTCCAAATTGCGGAGAAGAGTGTTCCTGCTGCGGTGTTTGGAGAGCTCGGCAAGAGAGCTGCAGAGAACAGGGAGGAGGAAAGCTCTGGTGCCCAGGAGAATGAGCAGCTTGGCGCCCTTGAGAGGATCAAGCGAAGGCGTCAATGATCTGCCACTGTCAAGATGCCCACACCATTAGCTGGTGCTCTTAACGATGTTGTAGCTGTAACAACTTGTAAACATGATTCTGAGTGGTGTTTTTGCTCTTGTACAAGAATTTACGGAAGTTATTAATCCGTTGTTGATCTGCGACCATTTTTTCGTaaa                                          ]




>consensus_12399#0
ATCCTCCTCGCCGCGGCGGAGCACTAAACCCTAGCGAGAGATGCCGTCGCCTGCGGGGGG
TCCGGTGGCCGTGGCGGCGGCGTCTGCGGCGGCGGCGGAGGCGCTGGGGATCTCGCCGGA
GATGTACCCGACGGAGGACGACCTGGCGTACGAGGAGGAGATCCTGCGCGAGCCGTTCAA
GCTCAAGGGGTGGTGGCGCTACCTCGTCGCCCGCGCCGCCGCGCCGTTCGCCAAGCGCGC
CGTCATCTACGAGCGCGCGCTCAAGGCGCTCCCGGGGAGCTACAAGCTGTGGCACGCCTA
CCTCCGCGAGCGCCTCGACCACGCGCGCCCGCACCCCATCTCCCACCACGCCTACGCCTC
CCTCAACAACACCTTCGAGCGCGCCCTCGCCACCATGCACAAGATGCCCCGCGTCTGGGT
GCTCTACCTCACCTCGCTGCTCGACCAGCGCCTGCTCACGCGCGCGCGCCGCGCCTTCGA
CCGCGCGCTGCGCGCGCTCCCCGTCACGCAGCACGACCGCATCTGGCCGCTCTACCTCCG
CCTCGCCTCGCTCCCGGCCTGCCCCGTCGAGACCTCGCTCCGCGTCTTCCGACGATACCT
CCAGTACGACCCCTCCCACGCTGAGGACTTCATCGATTTCCTCATCTCCGCAAACCGCTG
GCAGGAGGCCGCCGACCGCCTCGCGTCCGTGCTCAACGATGACGGCTTCCGCTCCGTCAA
GGGTAAGACCCAGCACCAGCTCTGGCTTGAGCTCTGCGAAATCCTCACCAAGCATGCCGA
TGAGGTTGCGGGGCTCAAGGTGGACGCTATACTGCGGGGCGGCATTCGCAAGTTCACCGA
TGAGGTTGGCAAGCTGTGGACCTCCCTGGCCGATTACTACGTCAGAAGAACCTTGTATGA
GAAGGCGAGGGATGTCTTCGAAGAGGGGGTTGCTTCGGTGATGACGGTGCAGGAATTCAG
CGTGGTGTTTGAGGCGTACACACAATTCGAGCAGAGTATGCTTGCGGCAAAGCTGGAGGC
AGCCGAGGAGGAGGGTGCGGGGAGTGAGGGGGAAGAGGAAGCGGGCAGGAAGAATGGGAT
GGACAAGCTGTCGAAGAAATTCCTCGCAGATTGCTGGCTGAATGATGAGGATGATACTGA
TTTGAGGCTGGCAAGGTTTGAGCGGCTGTTGGATCGCCGGCCAGAGCTCCTCAGCAGTGT
CCTGCTGCGACAGAATCCGCATAATGTGGAGGAATGGCACAGGAGGGTGAAACTTTTTGA
GAAGGATCCTACAAGGCAAGTAGCCACATATGTTGAAGCTGTGAAAACCGTAGACCCTAT
GAAGGCAGCTGGAAAACCACATACTCTATGGGTGGCATTCGCAAAGATGTATGAGAAACA
TAATCGTCTAGATAGTGCTGAAGAGATCTTTAAAAAAGCAACACAGGTGAACTACAAGGC
AGTTGACCACTTAGCCAGTATTTGGTGTGAGTGGGCAGAGATGGAGCTGAGGCACAGTAA
TTTTGACAAGGCTATTGAGCTGATGAGGCAAGCTACTGCAGAACCCTCTGTTGAGGTTAA
GAGGCGAGCTGCTGCTGAGGGGGATGAACCTGTCCAATTGAAAGTACATAAATCCCTGAA
ACTGTGGAGCTTCTATGTGGACCTGGAGGAAAGTCTTGGAACATTGGAATCAACTCGTGC
AGTTTATGAGAGAATATTGGATTTACGAATTGCCACTCCCCAAATAGTTCTCAATTATGC
ATATCTTCTTGAGGAAAACAAGTATTTCGAAGATGCGTTTAAAGTGTATGAGCGTGGTGT
GAAAATTTTTAAATATCCCCATGTTAAAGACATTTGGGTGACCTACCTCACAAAGTTTGT
AAGAAGGTATCAGAGAAGCAAGTTAGAGCGGGCAAGAGAACTGTTCGATGAAGCTGTCAA
ACAGGCTCCTCCACAAGAAAAGAAGGTATTGTATTTGCAGTATGCTAAGCTGGAGGAAGA
CTATGGCCTTGCGAAACGTGCAATGAATGTATACGACGAAGCTGTAAGGGCTGTTCCTAA
CAGCGAAAAGATGAGTATGTACGAAATATATATTGCACGGGCTGCGGAGCTATTTGGTGT
TCCAAGAACAAGACAGATATATGAGCAAGCAATTGAATCTGGACTCCCAGACAGAGATGT
CATGACAATGTGCATGAAATTTGCAGAACTTGAAAGAAACCTTGGAGAAATTGATCGTGC
CCGTGCCATTTATGTCCACGCATCCAACTATGCTGATCCAAACTCTCATCCTGAATTTTG
GAATAAATGGAATGAATTTGAGATTCAGCATGGTAACGAAGATACATTCAGGGAGATGCT
TCGCATCAAGCGTACTGTGGCTGCTAGCCGCAGTCAGACTCATTTCATACTCCCAGAGTA
CTTGATGCAGAGGGACCAGAGGCTGAACCTCGATGAGGCAGTTGACACTCTGAAACGAGC
CGGTGTTCCTGAGGATGAGATGGCTAACCTAGAAAGGCAACTAGCGCCAGGACCTTCCAC
GGCTCCACCAGCTCCAAGCACTGCTACTGCTCCTGCTAACCGGATGATGAACTTTGTCAG
TGCTGGAGTGCAGGCACAGGCTGAGAGCAGCAGCAGGCAACAACAGGCTGCTGCTACTAA
CAATGAGGACATTGAGCTGCCCGATGAGAGCGACGAGGAGGAAGACGATGTCCAAATTGC
GGAGAAGAGTGTTCCCGCTGCGGTGTTTGGAGAGCTCGGCAAGAGAGCTGCAGAGAACAG
GGAGGAGGAAAGCTCTGGTGCCCAGGAGAATGAGCAGCTTGGCGCCCTTGAGAGGATTAA
GCGAAGGCGTCAATGATCTGCCACTGTCAAGATGCCCACACCATTAGCTGGTGCCCTTAA
CGATGTTGTAGCTGTAACAACTTGTAAACATGATTTTGAGTGGTGTTTTTGCTCTTGTAC
AAGAATTTACGGGAGTTATTAATCCGTTGTTGATCTGCGACCATTTTTTCGTGTACTAAC
TATTGGGTACATTCCCCGCTTTTTATTCCCTCTTTTA

consensusID : consensus_12399#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 550
fasta sequence 
                              [CTAAAAGGAANTGGNGNGCCCTTCAAGTTCACNTTTCAAGNATNGTATTTTNCTGTTAACCGGNNGATGANTTTTNAGNGTGGGGGGNCGGCATAGGTTGGNGCAGCAGCCAGGCCAACAACAAGNTGTTGTTGCTAACAATGGGGATNAGCGNGCTNCCTGATGAGAGCGAACGAGGGAGGAAGACGATGACCAAAATTGCGGAAGAAGAGTTTTCCCNGCTGCGGTGTTTGGAGAGCTTGGCAACACAGCTGCAGAGAACAGGGAGGAGGAAAGNTNTGGTGCCCAGGAGAATGGGCAGCTTGGCGCCCTTGAGAGGATCAAGCGAAGGCGTCAATGATCTGCCACTGTCAAGATGCCCACAGAGCTGGTGCCCTTGTAACAACTTGTAAACATGATTTTGAGTGGTGTTTTTGCTCTTGTACAAGAATTTACGGGAGTTATTAATCCGTTATTGATCTGCGACCATTTTTTCGTGTACTAACTATTGGGTACATTCCCCGCTTTTTATTCTCTTCTAGGCTAGAAGGCAAAAAAAAAAAAAAAAAAA]

[-] EMBL AA752109             [CTAAAAGGAANTGGNGNGCCCTTCAAGTTCACNTTTCAAGNATNGTATTTTNCTGTTAACCGGNNGATGANTTTTNAGNGTGGGGGGNCGGCATAGGTTGGNGCAGCAGCCAGGCCAACAACAAGNTGTTGTTGCTAACAATGGGGATNAGCGNGCTNCCTGATGAGAGCGAACGAGGGAGGAAGACGATGACCAAAATTGCGGAAGAAGAGTTTTCCCNGCTGCGGTGTTTGGAGAGCTTGGCAACACAGCTGCAGAGAACAGGGAGGAGGAAAGNTNTGGTGCCCAGGAGAATGGGCAGCTTGGCGCCCTTGAGAGGATCAAGCGAAGGCGTCAATGATCTGCCACTGTCAAGATGCCCACAGAGCTGGTGCCCTTGTAACAACTTGTAAACATGATTTTGAGTGGTGTTTTTGCTCTTGTACAAGAATTTACGGGAGTTATTAATCCGTTATTGATCTGCGACCATTTTTTCGTGTACTAACTATTGGGTACATTCCCCGCTTTTTATTCTCTTCTAGGCTAGAAGGCAAAAAAAAAAAAAAAAAAA]




>consensus_12399#1
CTAAAAGGAANTGGNGNGCCCTTCAAGTTCACNTTTCAAGNATNGTATTTTNCTGTTAAC
CGGNNGATGANTTTTNAGNGTGGGGGGNCGGCATAGGTTGGNGCAGCAGCCAGGCCAACA
ACAAGNTGTTGTTGCTAACAATGGGGATNAGCGNGCTNCCTGATGAGAGCGAACGAGGGA
GGAAGACGATGACCAAAATTGCGGAAGAAGAGTTTTCCCNGCTGCGGTGTTTGGAGAGCT
TGGCAACACAGCTGCAGAGAACAGGGAGGAGGAAAGNTNTGGTGCCCAGGAGAATGGGCA
GCTTGGCGCCCTTGAGAGGATCAAGCGAAGGCGTCAATGATCTGCCACTGTCAAGATGCC
CACAGAGCTGGTGCCCTTGTAACAACTTGTAAACATGATTTTGAGTGGTGTTTTTGCTCT
TGTACAAGAATTTACGGGAGTTATTAATCCGTTATTGATCTGCGACCATTTTTTCGTGTA
CTAACTATTGGGTACATTCCCCGCTTTTTATTCTCTTCTAGGCTAGAAGGCAAAAAAAAA
AAAAAAAAAA

consensusID : consensus_12399#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 454
fasta sequence 
                              [GTTACCAAATGCTTTTTGGGTATAACTGGCAATCAGAAATTTTGTCCTTGCTTCATACGAATAAGTTCAGGGCAGATTCTTGTTGCGCCTGCTTTCTTCTTCCTTTAAGAACCTTGTCTCTGCTTGCTGATATCATGTCATGCGATATTTTGCATTTGCTTGCTTGCTTGTTTAGATTCCAAACCTTTGGTTGATTATTTCGTGTTCCTTTTTCCTGCATCGATGCTGTTTTGAAAATGATGTTTTTCCTATATTGCTTCAGTACTTACATTTTGTTTTGTTTGATCAGGCTCCTCCACAAGAAAAGAAGGTATTGTATTTGCAGTATGCTAAGCTGGAGGAAGACTATGGCCTTGCGAAACGTGCAATGAATGTATACGACGAAGCTGTAAGGGCTGTTCCTAACAGCGAAAAGATGAGTATGTACGAAATATATATTGCACGGGCTGCGGAG]

[+] EMBL AU197736             [GTTACCAAATGCTTTTTGGGTATAACTGGCAATCAGAAATTTTGTCCTTGCTTCATACGAATAAGTTCAGGGCAGATTCTTGTTGCGCCTGCTTTCTTCTTCCTTTAAGAACCTTGTCTCTGCTTGCTGATATCATGTCATGCGATATTTTGCATTTGCTTGCTTGCTTGTTTAGATTCCAAACCTTTGGTTGATTATTTCGTGTTCCTTTTTCCTGCATCGATGCTGTTTTGAAAATGATGTTTTTCCTATATTGCTTCAGTACTTACATTTTGTTTTGTTTGATCAGGCTCCTCCACAAGAAAAGAAGGTATTGTATTTGCAGTATGCTAAGCTGGAGGAAGACTATGGCCTTGCGAAACGTGCAATGAATGTATACGACGAAGCTGTAAGGGCTGTTCCTAACAGCGAAAAGATGAGTATGTACGAAATATATATTGCACGGGCTGCGGAG]




>consensus_12399#2
GTTACCAAATGCTTTTTGGGTATAACTGGCAATCAGAAATTTTGTCCTTGCTTCATACGA
ATAAGTTCAGGGCAGATTCTTGTTGCGCCTGCTTTCTTCTTCCTTTAAGAACCTTGTCTC
TGCTTGCTGATATCATGTCATGCGATATTTTGCATTTGCTTGCTTGCTTGTTTAGATTCC
AAACCTTTGGTTGATTATTTCGTGTTCCTTTTTCCTGCATCGATGCTGTTTTGAAAATGA
TGTTTTTCCTATATTGCTTCAGTACTTACATTTTGTTTTGTTTGATCAGGCTCCTCCACA
AGAAAAGAAGGTATTGTATTTGCAGTATGCTAAGCTGGAGGAAGACTATGGCCTTGCGAA
ACGTGCAATGAATGTATACGACGAAGCTGTAAGGGCTGTTCCTAACAGCGAAAAGATGAG
TATGTACGAAATATATATTGCACGGGCTGCGGAG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12399#0      ATCCTCCTCGCCGCGGCGGAGCACTAAACCCTAGCGAGAGATGCCGTCGCCTGCGGGGGG 60
consensus_12399#1      ------------------------------------------------------------
consensus_12399#2      ------------------------------------------------------------
                                                                                   

consensus_12399#0      TCCGGTGGCCGTGGCGGCGGCGTCTGCGGCGGCGGCGGAGGCGCTGGGGATCTCGCCGGA 120
consensus_12399#1      ------------------------------------------------------------
consensus_12399#2      ------------------------------------------------------------
                                                                                   

consensus_12399#0      GATGTACCCGACGGAGGACGACCTGGCGTACGAGGAGGAGATCCTGCGCGAGCCGTTCAA 180
consensus_12399#1      ------------------------------------------------------------
consensus_12399#2      ------------------------------------------------------------
                                                                                   

consensus_12399#0      GCTCAAGGGGTGGTGGCGCTACCTCGTCGCCCGCGCCGCCGCGCCGTTCGCCAAGCGCGC 240
consensus_12399#1      ------------------------------------------------------------
consensus_12399#2      ------------------------------------------------------------
                                                                                   

consensus_12399#0      CGTCATCTACGAGCGCGCGCTCAAGGCGCTCCCGGGGAGCTACAAGCTGTGGCACGCCTA 300
consensus_12399#1      ------------------------------------------------------------
consensus_12399#2      ------------------------------------------------------------
                                                                                   

consensus_12399#0      CCTCCGCGAGCGCCTCGACCACGCGCGCCCGCACCCCATCTCCCACCACGCCTACGCCTC 360
consensus_12399#1      ------------------------------------------------------------
consensus_12399#2      ------------------------------------------------------------
                                                                                   

consensus_12399#0      CCTCAACAACACCTTCGAGCGCGCCCTCGCCACCATGCACAAGATGCCCCGCGTCTGGGT 420
consensus_12399#1      ------------------------------------------------------------
consensus_12399#2      ------------------------------------------------------------
                                                                                   

consensus_12399#0      GCTCTACCTCACCTCGCTGCTCGACCAGCGCCTGCTCACGCGCGCGCGCCGCGCCTTCGA 480
consensus_12399#1      ------------------------------------------------------------
consensus_12399#2      ------------------------------------------------------------
                                                                                   

consensus_12399#0      CCGCGCGCTGCGCGCGCTCCCCGTCACGCAGCACGACCGCATCTGGCCGCTCTACCTCCG 540
consensus_12399#1      ------------------------------------------------------------
consensus_12399#2      ------------------------------------------------------------
                                                                                   

consensus_12399#0      CCTCGCCTCGCTCCCGGCCTGCCCCGTCGAGACCTCGCTCCGCGTCTTCCGACGATACCT 600
consensus_12399#1      ------------------------------------------------------------
consensus_12399#2      ------------------------------------------------------------
                                                                                   

consensus_12399#0      CCAGTACGACCCCTCCCACGCTGAGGACTTCATCGATTTCCTCATCTCCGCAAACCGCTG 660
consensus_12399#1      ------------------------------------------------------------
consensus_12399#2      ------------------------------------------------------------
                                                                                   

consensus_12399#0      GCAGGAGGCCGCCGACCGCCTCGCGTCCGTGCTCAACGATGACGGCTTCCGCTCCGTCAA 720
consensus_12399#1      ------------------------------------------------------------
consensus_12399#2      ------------------------------------------------------------
                                                                                   

consensus_12399#0      GGGTAAGACCCAGCACCAGCTCTGGCTTGAGCTCTGCGAAATCCTCACCAAGCATGCCGA 780
consensus_12399#1      ------------------------------------------------------------
consensus_12399#2      ------------------------------------------------------------
                                                                                   

consensus_12399#0      TGAGGTTGCGGGGCTCAAGGTGGACGCTATACTGCGGGGCGGCATTCGCAAGTTCACCGA 840
consensus_12399#1      ------------------------------------------------------------
consensus_12399#2      ------------------------------------------------------------
                                                                                   

consensus_12399#0      TGAGGTTGGCAAGCTGTGGACCTCCCTGGCCGATTACTACGTCAGAAGAACCTTGTATGA 900
consensus_12399#1      ------------------------------------------------------------
consensus_12399#2      ------------------------------------------------------------
                                                                                   

consensus_12399#0      GAAGGCGAGGGATGTCTTCGAAGAGGGGGTTGCTTCGGTGATGACGGTGCAGGAATTCAG 960
consensus_12399#1      ------------------------------------------------------------
consensus_12399#2      ------------------------------------------------------------
                                                                                   

consensus_12399#0      CGTGGTGTTTGAGGCGTACACACAATTCGAGCAGAGTATGCTTGCGGCAAAGCTGGAGGC 1020
consensus_12399#1      ------------------------------------------------------------
consensus_12399#2      ------------------------------------------------------------
                                                                                   

consensus_12399#0      AGCCGAGGAGGAGGGTGCGGGGAGTGAGGGGGAAGAGGAAGCGGGCAGGAAGAATGGGAT 1080
consensus_12399#1      ------------------------------------------------------------
consensus_12399#2      ------------------------------------------------------------
                                                                                   

consensus_12399#0      GGACAAGCTGTCGAAGAAATTCCTCGCAGATTGCTGGCTGAATGATGAGGATGATACTGA 1140
consensus_12399#1      ------------------------------------------------------------
consensus_12399#2      ------------------------------------------------------------
                                                                                   

consensus_12399#0      TTTGAGGCTGGCAAGGTTTGAGCGGCTGTTGGATCGCCGGCCAGAGCTCCTCAGCAGTGT 1200
consensus_12399#1      ------------------------------------------------------------
consensus_12399#2      ------------------------------------------------------------
                                                                                   

consensus_12399#0      CCTGCTGCGACAGAATCCGCATAATGTGGAGGAATGGCACAGGAGGGTGAAACTTTTTGA 1260
consensus_12399#1      ------------------------------------------------------------
consensus_12399#2      ------------------------------------------------------------
                                                                                   

consensus_12399#0      GAAGGATCCTACAAGGCAAGTAGCCACATATGTTGAAGCTGTGAAAACCGTAGACCCTAT 1320
consensus_12399#1      ------------------------------------------------------------
consensus_12399#2      ------------------------------------------------------------
                                                                                   

consensus_12399#0      GAAGGCAGCTGGAAAACCACATACTCTATGGGTGGCATTCGCAAAGATGTATGAGAAACA 1380
consensus_12399#1      ------------------------------------------------------------
consensus_12399#2      ------------------------------------------------------------
                                                                                   

consensus_12399#0      TAATCGTCTAGATAGTGCTGAAGAGATCTTTAAAAAAGCAACACAGGTGAACTACAAGGC 1440
consensus_12399#1      ------------------------------------------------------------
consensus_12399#2      ------------------------------------------------------------
                                                                                   

consensus_12399#0      AGTTGACCACTTAGCCAGTATTTGGTGTGAGTGGGCAGAGATGGAGCTGAGGCACAGTAA 1500
consensus_12399#1      ------------------------------------------------------------
consensus_12399#2      ------------------------------------------------------------
                                                                                   

consensus_12399#0      TTTTGACAAGGCTATTGAGCTGATGAGGCAAGCTACTGCAGAACCCTCTGTTGAGGTTAA 1560
consensus_12399#1      ------------------------------------------------------------
consensus_12399#2      ------------------------------------------------------------
                                                                                   

consensus_12399#0      GAGGCGAGCTGCTGCTGAGGGGGATGAACCTGTCCAATTGAAAGTACATAAATCCCTGAA 1620
consensus_12399#1      ------------------------------------------------------------
consensus_12399#2      ------------------------------------------------------------
                                                                                   

consensus_12399#0      ACTGTGGAGCTTCTATGTGGACCTGGAGGAAAGTCTTGGAACATTGGAATCAACTCGTGC 1680
consensus_12399#1      ------------------------------------------------------------
consensus_12399#2      ------------------------------------------------------------
                                                                                   

consensus_12399#0      AGTTTATGAGAGAATATTGGATTTACGAATTGCCACTCCCCAAATAGTTCTCAATTATGC 1740
consensus_12399#1      ------------------------------------------------------------
consensus_12399#2      ------------------------------------------------------------
                                                                                   

consensus_12399#0      ATATCTTCTTGAGGAAAACAAGTATTTCGAAGATGCGTTTAAAGTGTATGAGCGTGGTGT 1800
consensus_12399#1      ------------------------------------------------------------
consensus_12399#2      ------------------------------------------------------------
                                                                                   

consensus_12399#0      GAAAATTTTTAAATATCCCCATGTTAAAGACATTTGGGTGACCTACCTCACAAAGTTTGT 1860
consensus_12399#1      ------------------------------------------------------------
consensus_12399#2      ------------------------------------------------------------
                                                                                   

consensus_12399#0      AAGAAGGTATCAGAGAAGCAAGTTAGAGCGGGCAAGAGAACTGTTCGATGAAGCTGTCAA 1920
consensus_12399#1      ------------------------------------------------------------
consensus_12399#2      ------------------------------------------------------------
                                                                                   

consensus_12399#0      ACAGGCTCCTCCACAAGAAAAGAAGGTATTGTATTTGCAGTATGCTAAGCTGGAGGAAGA 1980
consensus_12399#1      ------------------------------------------------------------
consensus_12399#2      ------------------------------------------------------------
                                                                                   

consensus_12399#0      CTATGGCCTTGCGAAACGTGCAATGAATGTATACGACGAAGCTGTAAGGGCTGTTCCTAA 2040
consensus_12399#1      ------------------------------------------------------------
consensus_12399#2      ------------------------------------------------------------
                                                                                   

consensus_12399#0      CAGCGAAAAGATGAGTATGTACGAAATATATATTGCACGGGCTGCGGAGCTATTTGGTGT 2100
consensus_12399#1      ------------------------------------------------------------
consensus_12399#2      ------------------------------------------------------------
                                                                                   

consensus_12399#0      TCCAAGAACAAGACAGATATATGAGCAAGCAATTGAATCTGGACTCCCAGACAGAGATGT 2160
consensus_12399#1      ------------------------------------------------------------
consensus_12399#2      ------------------------------------------------------------
                                                                                   

consensus_12399#0      CATGACAATGTGCATGAAATTTGCAGAACTTGAAAGAAACCTTGGAGAAATTGATCGTGC 2220
consensus_12399#1      ------------------------------------------------------------
consensus_12399#2      ------------------------------------------------------------
                                                                                   

consensus_12399#0      CCGTGCCATTTATGTCCACGCATCCAACTATGCTGATCCAAACTCTCATCCTGAATTTTG 2280
consensus_12399#1      ------------------------------------------------------------
consensus_12399#2      ------------------------------------------------------------
                                                                                   

consensus_12399#0      GAATAAATGGAATGAATTTGAGATTCAGCATGGTAACGAAGATACATTCAGGGAGATGCT 2340
consensus_12399#1      ------------------------------------------------------------
consensus_12399#2      ------------------------------------------------------------
                                                                                   

consensus_12399#0      TCGCATCAAGCGTACTGTGGCTGCTAGCCGCAGTCAGACTCATTTCATACTCCCAGAGTA 2400
consensus_12399#1      ------------------------------------------------------------
consensus_12399#2      ------------------------------------------------------------
                                                                                   

consensus_12399#0      CTTGATGCAGAGGGACCAGAGGCTGAACCTCGATGAGGCAGTTGACACTCTGAAACGAGC 2460
consensus_12399#1      ------------------------------------------------------------
consensus_12399#2      ------------------------------------------------------------
                                                                                   

consensus_12399#0      CGGTGTTCCTGAGGATGAGATGGCTAACCTAGAAAGGCAACTAGCGCCAGGACCTTCCAC 2520
consensus_12399#1      ----------------------------CTAAAAGG--AANTGG----NGNGCCCTTCAA 26
consensus_12399#2      ------------------------------------------------------------
                                                                                   

consensus_12399#0      GGCTCCACCAGCTCCAAGCACTGCTACTGCTCCTGCTAACCGGATGATGAACTTTGTCAG 2580
consensus_12399#1      G--TTCACN--TTTCAAGNATNG-TATT-TTNCTGTTAACCGGNNGATGANTTTTN--AG 78
consensus_12399#2      ---------------GTTACCAAATGCTTTTTGGGTATAACTGGCAATCAGAAATTTTGT 45
                                               *  *  *   *   * * *   ** *    *     

consensus_12399#0      TGCTGGAGTGCAGGCACAGGCTGAGAGCAGCAGCAGG--CAACAACAGGCTGCTGCTACT 2638
consensus_12399#1      NG-TGGGGGGNCGGCATAGGTTG-GNGCAGCAGCCAGGCCAACAACAAGNTGTTGTTGCT 136
consensus_12399#2      CCTTGCTTCATACGAATAAGTTCAGGGCAGATTCTTG-----TTGCGCCTGCTTTCTTCT 100
                          **        * * * * *  * ****   *  *        *       *  * **

consensus_12399#0      AACAATGAGGA-CATTGAGCTGCCCGATGAGAGCGA-CGAGG-AGGAAGACGATGTCCAA 2695
consensus_12399#1      AACAATGGGGATNAGCGNGCTNCCTGATGAGAGCGAACGAGGGAGGAAGACGATGACCAA 196
consensus_12399#2      TCCTTTAAGAACCTTGTCTCTGCTTGCTGATATCATGTCATG--------CGATATT--- 149
                         *  *  * *        ** *  * *** * *     * *        ****      

consensus_12399#0      A-TTGCGGA-GAAGAGTGTTCCCG-CTGCGGTGTTTGGAGAGCTCGGCAAGAGAGCTGCA 2752
consensus_12399#1      AATTGCGGAAGAAGAGTTTTCCCNGCTGCGGTGTTTGGAGAGCTTGGCAACACAGCTGCA 256
consensus_12399#2      --TTGC-----ATTTGCTTGCTTGCTTGTTTAGATTCCAAACCTTTGGTTGATTATTTCG 202
                         ****     *   *  * *     **    * **  * * **  *    *    * * 

consensus_12399#0      GAGAACAGGGAGGAGGAAAGCTCTGGTGCCCAGGAGAATGAGCAGCTTGGCGCCCTTGAG 2812
consensus_12399#1      GAGAACAGGGAGGAGGAAAGNTNTGGTGCCCAGGAGAATGGGCAGCTTGGCGCCCTTGAG 316
consensus_12399#2      TGTTCCTTTTTCCTGCATCGATGCTGTTTTGAAAATGATGTTTTTCCTATATTGCTTCAG 262
                            *        * *  * *   **    *  *  ***     * *      *** **

consensus_12399#0      AGGATTAAGCGAAGGCGTCAATGATCTGCCACTGTCAAGATGCCCACACCATTAGCTGGT 2872
consensus_12399#1      AGGATCAAGCGAAGGCGTCAATGATCTGCCACTGTCAAGATGCCCACA----GAGCTGGT 372
consensus_12399#2      TAC-TTACATTTTGTTTTGTTTGATCAGGCTCC-TCCACAAGAAAAGA-----AGGTATT 315
                           * *      *   *   ***** * * *  ** * * *   * *     ** *  *

consensus_12399#0      GCCCTTAACGATGTTGTAGCTGTAACAACTTGTAAACATGATTTTGAGTGGTGTTTTTGC 2932
consensus_12399#1      GCCCTT---------------GTAACAACTTGTAAACATGATTTTGAGTGGTGTTTTTGC 417
consensus_12399#2      GTATTT---------------GCAGTA--TGCTAAGCTGGAGGAAGACTATGGCCTTGCG 358
                       *   **               * *  *  *  *** *  **    ** *   *  **   

consensus_12399#0      TCTTGTACAA-GAATTTACG----GGAGTTATTAATCCGTTGTTGATCTGCGACCATTTT 2987
consensus_12399#1      TCTTGTACAA-GAATTTACG----GGAGTTATTAATCCGTTATTGATCTGCGACCATTTT 472
consensus_12399#2      AAACGTGCAATGAATGTATACGACGAAGCTGTAAGGGCTGTTCCTAACAGCGAAAAGATG 418
                           ** *** **** **      * ** * * *   *  *    * * ****  *  * 

consensus_12399#0      TTCGTGTACTAACTATTGGGTACATTCCCCGCTTTTTATTCCCTCTTTTA---------- 3037
consensus_12399#1      TTCGTGTACTAACTATTGGGTACATTCCCCGCTTTTTATTCTCTTCTAGGCTAGAAGGCA 532
consensus_12399#2      AGTATGTACGAAATATATATTGCACGGGCTGCGGAG------------------------ 454
                           ***** ** ***    * **    * **                            

consensus_12399#0      ------------------
consensus_12399#1      AAAAAAAAAAAAAAAAAA 550
consensus_12399#2      ------------------


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)