cluster # 12727

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Oryza sativa
cluster # 12727 cluster # 12727 Sequences # 11 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_12727#0 length = 1914 sequences # 10

consensus_12727#1 length = 163 sequences # 1

consensusID : consensus_12727#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 1914
fasta sequence

                              [TAACCACCGGATAGAACAGTGCCCCCGCCATGAGGACGAGCACGAGCAACGCCGCGCTGCTCTTGCTGGTGGCAGCAGCGCAATGCCTCGCGCTGCTCTCCGTCGCCGCCGCGGCGAAGCCGCGCACGCGCCAGGGCGACTACCTCGACCGGCTCCGCGGCTCGCCGTCGTCGTGGGCGTCGCTGGCCGAGGATCGTGGCGCGCCGGCGCCGTCGCCATCGCCGTCCGGTGGGCGGCACGCGGCGCCAGCGGCGGCGGCGGTTGGGAGCAAGGAGGCGGACCG-GTGGCGGGGCTGCCGGGGCAGCCGGCCGGCGTGGGCTTCGCGCAGTACGCCGGGTACGTGACGGTGGACGCGGCGGCGGGGCGCGCGCTGTTCTACTACCTCGCCGAGGCCGACGGCGGCGCCGCCGCGTCGTCCAAGGCGCCCCTCCTCCTCTGGCTCAACGGCGGCCCCGGCTGCTCGTCGCTCGGGTACGGCGCCATGGAGGAGCTCGGCCCGTTCCGCGTCAAGAGCGACGGCGTGTCGCTCTACCGCAATCCCTACTCCTGGAACAACGTGGCGAACGTGATGTTCCTGGAGAGCCCGATCGGCGTGGGGTTCTCGTACTCGAACACGACGGCGGACTACAGCCGGATGGGGGACAACAGCACGGCGGAGGACGCGTACAAGTTCCTCGTCAACTGGATGGAGCGCTTCCCGGAGTACAAGGGCCGCGACTTCTACCTCGCCGGCGAGAGCTACGCCGGCCAC-TACGTCCCCCAGC-TCGCCCACGCCATCCTCCGCCACTCCTCCGCCGCCGCCG-GCGGCAAGCCC-TCCTCCTCGCCGATCAACC-TCAAAGGCATCATGATTGGGAACGCGGTGATCAACGACTGGAC-GACACAAAGGGGATGTACGACTTCTTCTGGACGCACGCGCTCATCTCCGACGAGGCCAACGACGGCATCACCAAGCACTGCAACTTCACCGACGGCGCCGACGCCAACAGCCTCTGCGACGACGCCACCAGCCTCGCCGACGACTGCCTCCAGGACATCGACATCTACAACATCTACGCCCCCAACTGCCAGTCGCCCGGCCTTGTCGTCTCGCCGCCGGTSACCCCCTCGATTGAGAGCTTTGATCCGTGCACGGATTACTATGTGGA-GGCCTACCTCAACAACCCTGATGTGCAAAAGGCGCTGCACGCAAACA-TCACCAGGCTTGATCACCCGTGGTCCGCTTGCAGTGGAGTCTTGAGACGCTGGGTCGACAGCGCTTCAACGGTTCTGCCCATTATCAAGGAGCTCCTGAAGAACAACATCAGAGTCTGGGTGTACAGTGGAGACACTGATGGGAGAGTACCTGTCACTTCCAGCAGATACTCTGTCAACCAGCTCAACCTTCCAGTTGCTGCTAAATGGAGACCATGGTTTAGCAACACTCAGGGTGTTGGAGACGTTGGTGGATACATTGTGCAGTACAAGGGGAACCTCAGCCTTGTAACCGTGAGAGGAGCAGGCCATGAAGTCCCCAGCTACCAGCCACAGCGAGCGCTTGTGCTTGTCCAGTATTTCCTTGAAGGCAAAACGCTACCTGATTGCGAAAAATGTGGAGAGGCTTAGTTATAAAAAAAAAACTTAACTTATGTTTACAAATATAAGTAGTATAATGTGCCATGACCACAAGTTGCATTATTCCCATTGTTGTCCCCATTCTAGATAGTGCAAGAAAGA-AGCAAAATGAAATGATATTAAGAAGTACTCAAATATAGAAACCATTGCC-CCCTGTATTTAGCAGATCATGTAACGGCAGTTCAGCAAACGATTTTATATAGAGTAAAAGATTGTAAGATGGCGCTCCTCTGATCTGAATATTGCTTGCCAAAATGGTTGGCTGAAATGAAAAGCAGATGCTTCATGCTTCCTTGTAAAAAA]

[+] EMBL CB647986             [TAACCACCGGATAGAACAGTGCCCCCGCCATGAGGACGAGCACGAGCAACGCCGCGCTGCTCTTGCTGGTGGCAGCAGCGCAATGCCTCGCGCTGCTCTCCGTCGCCGCCGCGGCGAAGCCGCGCACGCGCCAGGGCGACTACCTCGACCGGCTCCGCGGCTCGCCGTCGTCGTGGGCGTCGCTGGCCGAGGATCGTGGCGCGCCGGCGCCGTCGCCATCGCCGTCCGGTGGGCGGCACGCGGCGCCAGCGGCGGCGGCGGTTGGGAGCAAGGAGGCGGACCGCGTGGCGGGGCTGCCGGGGCAGCCGGCCGGCGTGGGCTTCGCGCAGTACGCCGGGTACGTGACGGTGGACGCGGCGGCGGGGCGCGCGCTGTTCTACTACCTCGCCGAGGCCGACGGCGGCGCCGCCGCGTCGTCCAAGGCGCCCCTCCTCCTCTGGCTCAACGGCGGCCCCGGCTGCTCGTCGCTCGGGTACGGCGCCATGGAGGAGCTCGGCCCGTTCCGCGTCAAGAGCGACGGCGTGTCACTCTACCGCAATCCCTACTCCTGGAACAACGTGGCGAACGTGAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL AU222629             [                CAGTGCCCCCGCCATGAGGACGAGCACGAGCAACGCCGCGCTGCTCTTGCTGGTGGCAGCAGCGCAATGCCTCGCGCTGCTCTCCGTCGCCGCCGCGGCGAAGCCGCGCACGCGCCAGGGCGACTACCTCGACCGGCTCCGCGGCTCGCCGTCGTCGTGGGCGTCGCTGGCCGAGGATCGTGGCGCGCCGGCGCCGTCGCCATCGCCGTCCGGTGGGCGGCACGCGGCGCCAGCGGCGGCGGCGGTTGGGAGCAAGGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL AY224473             [                                                                                                                                                                                                                                                                                  GGCGGACCG GTGGCGGGGCTGCCGGGGCAGCCGGCCGGCGTGGGCTTCGCGCAGTACGCCGGGTACGTGACGGTGGACGCGGCGGCGGGGCGCGCGCTGTTCTACTACCTCGCCGAGGCCGACGGCSGCGCCGCCGSGTCGTCCAAGGCGCCCCTCCTCCTCTGGCTAAACGGCGGCCCCGGCTGCTCGTCGCTCGGGTACGGCGCCATGGAGGAGCTCGGCCCGTTCCGCGTCAAGAGCGACGGCGTGTCGCTCTACCGCAATCCCTACTCCTGGAACAACGTGGCGAACGTGATGTTCCTGGAGAGCCCGATCGGCGTGGGGTTCTCGTACTCGAACACGACGGCGGACTACAGCCGGATGGGGGACAACAGCACGGCGGAGGACGCGTACAAGTTCCTCGTCAACTGGATGGAGCGCTTCCCGGAGTACAAGGGCCGCGACTTCTACCTCGCCGGCGAGAGCTACGCCGGCCAC TACGTCCCCCAGC TCGCCCACGCCATCCTCCGCCACTCCTCCGCCGCCGCCGNGCGGCAAGCCC TCCTCCTCGCCGATCAACC TCAAAGGCATCATGATTGGGAACGCGGTGATCAACGACTGGAC GACACAAAGGGGATGTACGACTTCTTCTGGACGCACGCGCTCATCTCCGACGAGGCCAACGACGGCATCACCAAGCACTGCAACTTCACCGACGGCGCCGACGCCAACAGCCTCTGCGACGACGCCACCAGCCTCGCCGACGACTGCCTCCAGGACATCGACATCTACAACATCTACGCCCCCAACTGCCAGTCGCCCGGCCTTGTCGTCTCGCCGCCGGTSACCCCCTCGATTGAGAGCTTTGATCCGTGCACGGATTACTATGTGGA GGCCTACCTCAACAACCCTGATGTGCAAAAGGCGCTGCACGCAAACA TCACCAGGCTTGATCACCCGTGGTCCGCTTGCAGTGGAGTCTTGAGACGCTGGGTCGACAGCGCTTCAACGGTTCTGCCCATTATCAAGGAGCTCCTKAAGAACAACATCAGAGTCTGGGTGTACAGTGGAGACACTGATGGGAGAGTACCTGTCACTTCCAGCAGATACTCTGTCAACCAGCTCAACCTTCCAGTTGCTGCTAAATGGAGACCATGGTTTAGCAACACTCAGGGTGTTGGAGACGTTGGTGGATACATTGTGCAGTACAAGGGGAACCTCAGCCTTGTAACCGTGAGAGGAGCAGGCCATGAAGTCCCCAGCTACCAGCCACAGCGAGCGCTTGTGCTTGTCCAGTATTTCCTTGAAGGCAAAACGCTACCTGATTGCGAAAAATGTGG                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CB653592             [                                                                                                                                                                                                                                                                                                                                                                                                      AGGCCGACGGCGGCGCCGCCGCGTCGTCCAAGGCGCCCCTCCTCCTCTGGCTCAACGGCGGCCCCGGCTGCTCGTCGCTCGGGTACGGCGCCATGGAGGAGCTCGGCCCGTTCCGCGTCAAGAGCGACGGCGTGTCGCTCTACCGCAATCCCTACTCCTGGAACAACGTGGCGAACGTGATGTTCCTGGAGAGCCCGATCGGCGTGGGGTTCTCGTACTCGAACACGACGGCGGACTACAGCCGGATGGGGGACAACAGCACGGCGGAGGACGCGTACAAGTTCCTCGTCAACTGGATGGAGCGCTTCCCGGAGTACAAGGGCCGCGACTTCTACCTCGCCGGCGAGAGCTACGCCGGCCAC TACGTCCCCCAGC TCGCCCACGCCATCCTCCGCCACTCCTCCGCCGCCGCCG GCGGCAAGCCC TCCTCCTCGCCGATCAACC TCAAAGGCATCATGATTGGGAACGCGGTGATCAACGACTGGACGGACACAAAGGGGATGTACGACTTCTTCTGGACGCACGCGCTCATCTCCGACGAGGCCAACGACGGCATCACCAAGCACTGCAACTTCACCGACGGCGCCGACGCCAACAGCCTCTGCGACGACGCCACCAGCCTCGCCGACGACTGCCTCCAGGACATCGACATCTACAACATCTACGCCCCCAACTGCCAGTCGCCCGGCCTTGTCGTCTCGCCGCCGGTCACCCCCTCGATTGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL AU032221             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               GAGCGACGGCGTGTCGCTCTACCGCAATCCCTACTCCTGGAACAACGTGNCGAACGTGATGTTCCTGGAGAGCCCGATCGGCGTGGGGTTCTCGTACTCGAACACGACGGCGGACTACAGCCGGATGGGGGACAACAGCACGGCGGAGGACGCGTACAAGTTCCTCGTCAACTGGATGGAGCGCTTCCCGGAGTACAAGGGCCGCGACTTCTACCTCGCCGGCGAGAGCTACGCCGGCCACTTACGTCCCCCAACTTCGCCCACGGCATNCTTCNGCANTTCTTCGCCGCCGCCG GGGAAAAGCCCTTCCTTCTTGGCGATCAACCTTAAAAGGCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CB647987             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       TCGATTGAGAGCTTGGATCCGTGCACGGATTACTATGTGGAGGGCCTACCTCAACAACCCTGATGTGCAAAAGGCGCTGCACGCAAACA TCACCAGGCTTGATCACCCGTGGTCCGCTTGCAGTGGAGTCTTGAGACGCTGGGTCGACAGCGCTTCAACGGTTCTGCCCATTATCAAGGAGCTCCTGAAGAACAACATCAGAGTCTGGGTGTACAGTGGAGACACTGATGGGAGAGTACCTGTCACTTCCAGCAGATACTCTGTCAACCAGCTCAACCTTCCAGTTGCTGCTAAATGGAGACCATGGTTTAGCAACACTCAGGGTGTTGGAGACGTTGGTGGATACATTGTGCAGTACAAGGGGAACCTCAGCCTTGTAACCGTGAGAGGAGCAGGCCATGAAGTCCCCAGCTACCAGCCACAGCGAGCGCTTGTGCTTGTCCAGTATTTCCTTGAAGGCAAAACGCTACCTGATTGCGAAAAATGTGGAGAGGCTTAGTTATAAAAAAAAAACTTAACTTATGTTTACAAATATAAGTAGTATAATGTGCCATGACCACAAGTTGCATTATTCCCATTGTTGTCCCCATTCTAGATAGTCTAAAGGGGA AGCAAAATGAA                                                                                                                                                                                               ]
[+] EMBL AU030768             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            TGGA GGCCTACCTCAACAACCCTGATGTGCAAAAGGCGCNGCACGCAAACATTCACCAGGCTTGATCACCCGTGGTCCGCTTGCAGTGGAGTCTTGAGACGCTGGGTCGACNGCGCTTCAACGGTTCTGCCCATTATCAAGGAGCTCCTGAAGAACAACATCAGAGTCTGGGTGTACAGTGGAGACACTGATGGGAGAGTNCCTGTCACTTCCAGCAGATACTCTGTNAACCAGCTCAACCTTCCAGTTGCTGCTAAATGGAGACCATGGTTTAGCAACACTCAGGGTGTTGGAGACGTTGGTGGATACATTGTGCAGTACAAGGGGAACCTCAGCCTTGTAACCGTGAGAGGAGCAGGCCATGAAGTCCCCAGCTACCAGCCACAGCGAGCGCTTGTGCTTGTCCAGTATTTCCTTGAAGGCAAAACGCTACCTGATTGCGAAAAATGTGGAGAGGCTTAGTTATAAAAAAAAAACTTAACTTATGTTTACAAATATAAGTAGTATAATGTGCCATGACCACAAGTTGCTTTATTCCCATTGTTGTCCCCATTCTAGATAGTGCAAGAAAGA AGCAAAATGAAATGATATTAAGAAGTACTCAAATATAGAAACCATTGCC CCCTGTATTTAGCAaaaaa                                                                                                                                     ]
[-] EMBL CB653593             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             AAGGCGCTGCACGCAAACA TCACCAGGCTTGATCACCCGTGGTCCGCTTGCAGTGGAGTCTTGAGACGCTGGGTCGACAGCGCTTCAACGGTTCTGCCCATTATCAAGGAGCTCCTGAAGAACAACATCAGAGTCTGGGTGTACAGTGGAGACACTGATGGGAGAGTACCTGTCACTTCCAGCAGATACTCTGTCAACCAGCTCAACCTTCCAGTTGCTGCTAAATGGAGACCATGGTTTAGCAACACTCAGGGTGTTGGAGACGTTGGTGGATACATTGTGCAGTACAAGGGGAACCTCAGCCTTGTAACCGTGAGAGGAGCAGGCCATGAAGTCCCCAGCTACCAGCCACAGCGAGCGCTTGTGCTTGTCCAGTATTTCCTTGAAGGCAAAACGCTACCTGATTGCGAAAAATGTGGAGAGGCTTAGTTATAAAAAAAAAACTTAACTTATGTTTACAAATATAAGTAGTATAATGTGCCATGACCACAAGTTGCATTATTCCCATTGTTGTCCCCATTCTAGATAGTGCAAGAAAGA AGCAAAATGAAATGATATTAAGAAGTACTCAAATATAGAAACCATTGCC CCCTGTATTTAGCAGATCATGTAACGGCAGTTCAGCAAACGATTTTATATAGAGTAAAAGATTGTAAGATGGCGCTCCTCTGATCTGAATATTGCTTGCCAAAATGGTTGGCTGAAATGAAAAGCAGATGCTTCATG               ]
[+] EMBL AU173535             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      CATGGTTTAGCAACACTCAGGGTGTTGGAGACGTTGGTGGATACATTGTGCAGTCCAAGGGGAACCTCAGCCTTGTAACCGTGAGAGGAGCAGGCCATGAAGTCCCCAGCTACCAGCCACAGCGAGCGCTTGTGCTTGTCCAGTATTTCCTTGAAGGCAAAACGCTACCTGATTGCGAAAAATGTGGAGAGGCTTAGTTATAAAAAAAAAACTTAACTTATGTTTACAAATATAAGTAGTATAATGTGCCATGACCACAAGTTGCATTATTCCCATTGTTGTCCCCATTNTAGATAGTGCAAGAAAGA AGCAAAATGAAATGATATTAAGAAGTACTCAAATATAGAAACCATTGCC CCCTGTATTTAGCAGATCATGTAACGGCAGTTCAGCAAACGATTTTATATAGAGTAAAAGATTGTAAGAaaaa                                                                               ]
[+] EMBL BI812647             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               TGCAAGAAAGAGAGCAAAATGAAATGATATTAAGAAGTACTCAAATATAGAAACCATTGCCACCCTGCATTTAGCAGATCATGTAACGGCAGTTCAGCAAACGATTTTATATAGAGTAAAAGATTGTAAGATGGCGCTCCTCTGATCTGAATATTGCTTGCCAAAATGGTTGGCTGAAATGAAAA CAGATGCTTCATGCTTCCTTGTAAAAAA]




>consensus_12727#0
TAACCACCGGATAGAACAGTGCCCCCGCCATGAGGACGAGCACGAGCAACGCCGCGCTGC
TCTTGCTGGTGGCAGCAGCGCAATGCCTCGCGCTGCTCTCCGTCGCCGCCGCGGCGAAGC
CGCGCACGCGCCAGGGCGACTACCTCGACCGGCTCCGCGGCTCGCCGTCGTCGTGGGCGT
CGCTGGCCGAGGATCGTGGCGCGCCGGCGCCGTCGCCATCGCCGTCCGGTGGGCGGCACG
CGGCGCCAGCGGCGGCGGCGGTTGGGAGCAAGGAGGCGGACCGGTGGCGGGGCTGCCGGG
GCAGCCGGCCGGCGTGGGCTTCGCGCAGTACGCCGGGTACGTGACGGTGGACGCGGCGGC
GGGGCGCGCGCTGTTCTACTACCTCGCCGAGGCCGACGGCGGCGCCGCCGCGTCGTCCAA
GGCGCCCCTCCTCCTCTGGCTCAACGGCGGCCCCGGCTGCTCGTCGCTCGGGTACGGCGC
CATGGAGGAGCTCGGCCCGTTCCGCGTCAAGAGCGACGGCGTGTCGCTCTACCGCAATCC
CTACTCCTGGAACAACGTGGCGAACGTGATGTTCCTGGAGAGCCCGATCGGCGTGGGGTT
CTCGTACTCGAACACGACGGCGGACTACAGCCGGATGGGGGACAACAGCACGGCGGAGGA
CGCGTACAAGTTCCTCGTCAACTGGATGGAGCGCTTCCCGGAGTACAAGGGCCGCGACTT
CTACCTCGCCGGCGAGAGCTACGCCGGCCACTACGTCCCCCAGCTCGCCCACGCCATCCT
CCGCCACTCCTCCGCCGCCGCCGGCGGCAAGCCCTCCTCCTCGCCGATCAACCTCAAAGG
CATCATGATTGGGAACGCGGTGATCAACGACTGGACGACACAAAGGGGATGTACGACTTC
TTCTGGACGCACGCGCTCATCTCCGACGAGGCCAACGACGGCATCACCAAGCACTGCAAC
TTCACCGACGGCGCCGACGCCAACAGCCTCTGCGACGACGCCACCAGCCTCGCCGACGAC
TGCCTCCAGGACATCGACATCTACAACATCTACGCCCCCAACTGCCAGTCGCCCGGCCTT
GTCGTCTCGCCGCCGGTSACCCCCTCGATTGAGAGCTTTGATCCGTGCACGGATTACTAT
GTGGAGGCCTACCTCAACAACCCTGATGTGCAAAAGGCGCTGCACGCAAACATCACCAGG
CTTGATCACCCGTGGTCCGCTTGCAGTGGAGTCTTGAGACGCTGGGTCGACAGCGCTTCA
ACGGTTCTGCCCATTATCAAGGAGCTCCTGAAGAACAACATCAGAGTCTGGGTGTACAGT
GGAGACACTGATGGGAGAGTACCTGTCACTTCCAGCAGATACTCTGTCAACCAGCTCAAC
CTTCCAGTTGCTGCTAAATGGAGACCATGGTTTAGCAACACTCAGGGTGTTGGAGACGTT
GGTGGATACATTGTGCAGTACAAGGGGAACCTCAGCCTTGTAACCGTGAGAGGAGCAGGC
CATGAAGTCCCCAGCTACCAGCCACAGCGAGCGCTTGTGCTTGTCCAGTATTTCCTTGAA
GGCAAAACGCTACCTGATTGCGAAAAATGTGGAGAGGCTTAGTTATAAAAAAAAAACTTA
ACTTATGTTTACAAATATAAGTAGTATAATGTGCCATGACCACAAGTTGCATTATTCCCA
TTGTTGTCCCCATTCTAGATAGTGCAAGAAAGAAGCAAAATGAAATGATATTAAGAAGTA
CTCAAATATAGAAACCATTGCCCCCTGTATTTAGCAGATCATGTAACGGCAGTTCAGCAA
ACGATTTTATATAGAGTAAAAGATTGTAAGATGGCGCTCCTCTGATCTGAATATTGCTTG
CCAAAATGGTTGGCTGAAATGAAAAGCAGATGCTTCATGCTTCCTTGTAAAAAA

consensusID : consensus_12727#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 163
fasta sequence

                              [CGGAAAGAAGCAAAATGAAATGATATTAAGAAGTACTCAAATNTAGAAACCATTGCCCCCTGTATTTAGCAGATCATGTAACGGCNGTTCAGCAAACGATTTTATATAGNGTAAAAGATTGTAAGATGGCGCTCCAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AU031200             [CGGAAAGAAGCAAAATGAAATGATATTAAGAAGTACTCAAATNTAGAAACCATTGCCCCCTGTATTTAGCAGATCATGTAACGGCNGTTCAGCAAACGATTTTATATAGNGTAAAAGATTGTAAGATGGCGCTCCAAAAAAAAAAAAAAAAAAAAAAAAAAAA]




>consensus_12727#1
CGGAAAGAAGCAAAATGAAATGATATTAAGAAGTACTCAAATNTAGAAACCATTGCCCCC
TGTATTTAGCAGATCATGTAACGGCNGTTCAGCAAACGATTTTATATAGNGTAAAAGATT
GTAAGATGGCGCTCCAAAAAAAAAAAAAAAAAAAAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12727#0      TAACCACCGGATAGAACAGTGCCCCCGCCATGAGGACGAGCACGAGCAACGCCGCGCTGC 60
consensus_12727#1      ------------------------------------------------------------
                                                                                   

consensus_12727#0      TCTTGCTGGTGGCAGCAGCGCAATGCCTCGCGCTGCTCTCCGTCGCCGCCGCGGCGAAGC 120
consensus_12727#1      ------------------------------------------------------------
                                                                                   

consensus_12727#0      CGCGCACGCGCCAGGGCGACTACCTCGACCGGCTCCGCGGCTCGCCGTCGTCGTGGGCGT 180
consensus_12727#1      ------------------------------------------------------------
                                                                                   

consensus_12727#0      CGCTGGCCGAGGATCGTGGCGCGCCGGCGCCGTCGCCATCGCCGTCCGGTGGGCGGCACG 240
consensus_12727#1      ------------------------------------------------------------
                                                                                   

consensus_12727#0      CGGCGCCAGCGGCGGCGGCGGTTGGGAGCAAGGAGGCGGACCGGTGGCGGGGCTGCCGGG 300
consensus_12727#1      ------------------------------------------------------------
                                                                                   

consensus_12727#0      GCAGCCGGCCGGCGTGGGCTTCGCGCAGTACGCCGGGTACGTGACGGTGGACGCGGCGGC 360
consensus_12727#1      ------------------------------------------------------------
                                                                                   

consensus_12727#0      GGGGCGCGCGCTGTTCTACTACCTCGCCGAGGCCGACGGCGGCGCCGCCGCGTCGTCCAA 420
consensus_12727#1      ------------------------------------------------------------
                                                                                   

consensus_12727#0      GGCGCCCCTCCTCCTCTGGCTCAACGGCGGCCCCGGCTGCTCGTCGCTCGGGTACGGCGC 480
consensus_12727#1      ------------------------------------------------------------
                                                                                   

consensus_12727#0      CATGGAGGAGCTCGGCCCGTTCCGCGTCAAGAGCGACGGCGTGTCGCTCTACCGCAATCC 540
consensus_12727#1      ------------------------------------------------------------
                                                                                   

consensus_12727#0      CTACTCCTGGAACAACGTGGCGAACGTGATGTTCCTGGAGAGCCCGATCGGCGTGGGGTT 600
consensus_12727#1      ------------------------------------------------------------
                                                                                   

consensus_12727#0      CTCGTACTCGAACACGACGGCGGACTACAGCCGGATGGGGGACAACAGCACGGCGGAGGA 660
consensus_12727#1      ------------------------------------------------------------
                                                                                   

consensus_12727#0      CGCGTACAAGTTCCTCGTCAACTGGATGGAGCGCTTCCCGGAGTACAAGGGCCGCGACTT 720
consensus_12727#1      ------------------------------------------------------------
                                                                                   

consensus_12727#0      CTACCTCGCCGGCGAGAGCTACGCCGGCCACTACGTCCCCCAGCTCGCCCACGCCATCCT 780
consensus_12727#1      ------------------------------------------------------------
                                                                                   

consensus_12727#0      CCGCCACTCCTCCGCCGCCGCCGGCGGCAAGCCCTCCTCCTCGCCGATCAACCTCAAAGG 840
consensus_12727#1      ------------------------------------------------------------
                                                                                   

consensus_12727#0      CATCATGATTGGGAACGCGGTGATCAACGACTGGACGACACAAAGGGGATGTACGACTTC 900
consensus_12727#1      ------------------------------------------------------------
                                                                                   

consensus_12727#0      TTCTGGACGCACGCGCTCATCTCCGACGAGGCCAACGACGGCATCACCAAGCACTGCAAC 960
consensus_12727#1      ------------------------------------------------------------
                                                                                   

consensus_12727#0      TTCACCGACGGCGCCGACGCCAACAGCCTCTGCGACGACGCCACCAGCCTCGCCGACGAC 1020
consensus_12727#1      ------------------------------------------------------------
                                                                                   

consensus_12727#0      TGCCTCCAGGACATCGACATCTACAACATCTACGCCCCCAACTGCCAGTCGCCCGGCCTT 1080
consensus_12727#1      ------------------------------------------------------------
                                                                                   

consensus_12727#0      GTCGTCTCGCCGCCGGTSACCCCCTCGATTGAGAGCTTTGATCCGTGCACGGATTACTAT 1140
consensus_12727#1      ------------------------------------------------------------
                                                                                   

consensus_12727#0      GTGGAGGCCTACCTCAACAACCCTGATGTGCAAAAGGCGCTGCACGCAAACATCACCAGG 1200
consensus_12727#1      ------------------------------------------------------------
                                                                                   

consensus_12727#0      CTTGATCACCCGTGGTCCGCTTGCAGTGGAGTCTTGAGACGCTGGGTCGACAGCGCTTCA 1260
consensus_12727#1      ------------------------------------------------------------
                                                                                   

consensus_12727#0      ACGGTTCTGCCCATTATCAAGGAGCTCCTGAAGAACAACATCAGAGTCTGGGTGTACAGT 1320
consensus_12727#1      ------------------------------------------------------------
                                                                                   

consensus_12727#0      GGAGACACTGATGGGAGAGTACCTGTCACTTCCAGCAGATACTCTGTCAACCAGCTCAAC 1380
consensus_12727#1      ------------------------------------------------------------
                                                                                   

consensus_12727#0      CTTCCAGTTGCTGCTAAATGGAGACCATGGTTTAGCAACACTCAGGGTGTTGGAGACGTT 1440
consensus_12727#1      ------------------------------------------------------------
                                                                                   

consensus_12727#0      GGTGGATACATTGTGCAGTACAAGGGGAACCTCAGCCTTGTAACCGTGAGAGGAGCAGGC 1500
consensus_12727#1      ------------------------------------------------------------
                                                                                   

consensus_12727#0      CATGAAGTCCCCAGCTACCAGCCACAGCGAGCGCTTGTGCTTGTCCAGTATTTCCTTGAA 1560
consensus_12727#1      ------------------------------------------------------------
                                                                                   

consensus_12727#0      GGCAAAACGCTACCTGATTGCGAAAAATGTGGAGAGGCTTAGTTATAAAAAAAAAACTTA 1620
consensus_12727#1      ------------------------------------------------------------
                                                                                   

consensus_12727#0      ACTTATGTTTACAAATATAAGTAGTATAATGTGCCATGACCACAAGTTGCATTATTCCCA 1680
consensus_12727#1      ------------------------------------------------------------
                                                                                   

consensus_12727#0      TTGTTGTCCCCATTCTAGATAGTGCAAGAAAGAAGCAAAATGAAATGATATTAAGAAGTA 1740
consensus_12727#1      -------------------------CGGAAAGAAGCAAAATGAAATGATATTAAGAAGTA 35
                                                  *********************************

consensus_12727#0      CTCAAATATAGAAACCATTGCCCCCTGTATTTAGCAGATCATGTAACGGCAGTTCAGCAA 1800
consensus_12727#1      CTCAAATNTAGAAACCATTGCCCCCTGTATTTAGCAGATCATGTAACGGCNGTTCAGCAA 95
                       ******* ****************************************** *********

consensus_12727#0      ACGATTTTATATAGAGTAAAAGATTGTAAGATGGCGCTCCTCTGATCTGAATATTGCTTG 1860
consensus_12727#1      ACGATTTTATATAGNGTAAAAGATTGTAAGATGGCGCTCCAAAAAAAAAAAAAAAAAAAA 155
                       ************** *************************    *    ** *       

consensus_12727#0      CCAAAATGGTTGGCTGAAATGAAAAGCAGATGCTTCATGCTTCCTTGTAAAAAA 1914
consensus_12727#1      AAAAAAAA---------------------------------------------- 163
                         ****