cluster # 12728

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Oryza sativa
cluster # 12728 cluster # 12728 Sequences # 11 consensus # 7

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_12728#0 length = 2112 sequences # 5
consensus_12728#1 length = 805 sequences # 1
consensus_12728#2 length = 694 sequences # 1

consensus_12728#3 length = 529 sequences # 1
consensus_12728#4 length = 493 sequences # 1
consensus_12728#5 length = 263 sequences # 1
consensus_12728#6 length = 188 sequences # 1

consensusID : consensus_12728#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 2112
fasta sequence

                              [CCTCGTCGTCTTCCCCCGCTGATGACAGGGGCCTCCCCAGATCAAGCACTATGCCAGGTGGGATTAATAATGTTGAAATAACCAATGAAACTGCTGGTCCATCTAATCTGGAAAGATCAAGAACAGAGAGGCGTCGACAAAACAATCCAGCTGATGATCCTACTAAACAGTTATTTGATGATAAAATTTCCCTAAAAAAGAAGCTCGAAATGCTAAATCGGATAGCTACAGTGAAAGATGATGGAACTGTGGTGGTTGATGTGCCAAGTTCTCTGGAAACAAGTACAACTGATGGTGTAGCATATGATGGCTATAGTGATGTTACTGTTGAGGAACCATTGGATGGAGCAGACATATCTGTGAGGCCTCCTATGGATATTGTTATTCTTATTGTGGGCACAAGAGGTGATGTTCAGCCATTCATTGCTATAGGCAAACGCTTACAGGATTATGGACACCGTGTGAGATTGGCAACCCATGCAAACTTTAAGGAGTTCGTTCTAACGGCTGGTCTGGAGTTTTTCCCTCTTGGCGGTGATCCAAAAACACTTGCTGAATACATGGTGAAGAATAAAGGATTCTTGCCTTCTGGTCCTTCAGAAATTCCTATTCAGAGGAAACAGATGAAAGAAATTATATTCTCTTTGCTACCTGCGTGCAAGGAGCCTGATCCTGACACTGGTATTCCTTTCAAAGTGGATGCTATCATTGCTAACCCTCCAGCATATGGACATACTCATGTGGCAGAGGCACTAAAAGTACCTATTCATATATTCTTTACCATGCCATGGACGCCAACTAGTGAATTCCCCCATCCTCTTTCTCGTGTGAAACAAGCGGCTGGATATCGACTTTCTTATCAAATTGTTGACTCTATGATTTGGCTTGGTATCCGAGATATGATAAATGAATTTAGGAAGAAGAAGCTGAAGTTGCGTCCGGTAACATACCTAAGTGGTGCACAGGGTTCTGGGAATGACATTCCTCATGGTTACATCTGGAGTCCTCACCTTGTTCCAAAACCGAAAGATTGGGGCCCTAAGATTGATGTTGTTGGATTTTGCTTTCTTGATCTTGCTTCCAATTATGTGCCTCCTGAACCACTTGTAAAATGGCTTGAAGCTGGTGACAAGCCCATATACGTTGGGTTTGGTAGTCTTCCAGTTCAAGATCCAGCAAAGATGACTGAAGTCATTGTCAAAGCACTTGAAATAACTGGACAGAGAGGTATCATCAACAAAGGTTGGGGTGGGCTTGGAACATTGGCAGAGCCAAAAGATTTTGTATATCTACTTGATAACTGCCCCCATGACTGGCTCTTCCTGCAGTGTAAAGCAGTGGTACATCATGGCGGTGCTGGAACAACAGCTGCTGGCCTCAAAGCAGCGTGCCCTACAACTATTGTACCTTTCTTTGGTGACCAACCATTCTGGGGAGACCGAGTGCATGCTAGAGGGGTAGGGCCTCTACCTATACCAGTTGATCAATTCAGCTTGCAAAAATTGGTTGATGCTATAAACTTCATGATGGAGCCAAAGGTGAAAGACAATGCCGTGGAGCTTGCCAAGGCCATGGAATCTGAAGATGGTGTGTCAGGTGCAGTCAGGGCATTCCTCAGACATCTACCTTCAAGAGCAGAGGAAACAGCACCTCAGCAGACATCCAGCTTCCTGGAATTCTTAGGTCCTGTAAGTAAATGTCTTGGTTGCTCATAGGTGACAGTGAGGCAATTACACAAAGAATGCCATTTCTCCCTGTTGAAAGAAGAGAATTTTGAACATCCCTGCAAGGATCAGGAGAACGGATTTCCTG--GAGAGTGTGCTTTATTATCTTTTATTTTTTTCCTTTTTGTGTATTTTTTCTCTTTTATTGTGTAAAAGGTGCTTGTCTATACATCATTTTGATGTGCATCGTTGCCCTGCTGGTCCTGCAACAAGTAAAGAATCTCACATGTACGACCAGTCCTTTCTGTGTATATGGAGAGAAGTGGAGAGGCACACGAATAGTTGAGTTGTCGATTGCTGCAATGATTCTAACCAAAGCTTCAGGTTTATTGTATTGGTCATATTGTACCTTTTATACCATTTTCTTTAGTTCTCGTTTAAAAAAAAA]

[+] EMBL AK064088             [CCTCGTCGTCTTCCCCCGCTGATGACAGGGGCCTCCCCAGATCAAGCACTATGCCAGGTGGGATTAATAATGTTGAAATAACCAATGAAACTGCTGGTCCATCTAATCTGGAAAGATCAAGAACAGAGAGGCGTCGACAAAACAATCCAGCTGATGATCCTACTAAACAGTTATTTGATGATAAAATTTCCCTAAAAAAGAAGCTCGAAATGCTAAATCGGATAGCTACAGTGAAAGATGATGGAACTGTGGTGGTTGATGTGCCAAGTTCTCTGGAAACAAGTACAACTGATGGTGTAGCATATGATGGCTATAGTGATGTTACTGTTGAGGAACCATTGGATGGAGCAGACATATCTGTGAGGCCTCCTATGGATATTGTTATTCTTATTGTGGGCACAAGAGGTGATGTTCAGCCATTCATTGCTATAGGCAAACGCTTACAGGATTATGGACACCGTGTGAGATTGGCAACCCATGCAAACTTTAAGGAGTTCGTTCTAACGGCTGGTCTGGAGTTTTTCCCTCTTGGCGGTGATCCAAAAACACTTGCTGAATACATGGTGAAGAATAAAGGATTCTTGCCTTCTGGTCCTTCAGAAATTCCTATTCAGAGGAAACAGATGAAAGAAATTATATTCTCTTTGCTACCTGCGTGCAAGGAGCCTGATCCTGACACTGGTATTCCTTTCAAAGTGGATGCTATCATTGCTAACCCTCCAGCATATGGACATACTCATGTGGCAGAGGCACTAAAAGTACCTATTCATATATTCTTTACCATGCCATGGACGCCAACTAGTGAATTCCCCCATCCTCTTTCTCGTGTGAAACAAGCGGCTGGATATCGACTTTCTTATCAAATTGTTGACTCTATGATTTGGCTTGGTATCCGAGATATGATAAATGAATTTAGGAAGAAGAAGCTGAAGTTGCGTCCGGTAACATACCTAAGTGGTGCACAGGGTTCTGGGAATGACATTCCTCATGGTTACATCTGGAGTCCTCACCTTGTTCCAAAACCGAAAGATTGGGGCCCTAAGATTGATGTTGTTGGATTTTGCTTTCTTGATCTTGCTTCCAATTATGTGCCTCCTGAACCACTTGTAAAATGGCTTGAAGCTGGTGACAAGCCCATATACGTTGGGTTTGGTAGTCTTCCAGTTCAAGATCCAGCAAAGATGACTGAAGTCATTGTCAAAGCACTTGAAATAACTGGACAGAGAGGTATCATCAACAAAGGTTGGGGTGGGCTTGGAACATTGGCAGAGCCAAAAGATTTTGTATATCTACTTGATAACTGCCCCCATGACTGGCTCTTCCTGCAGTGTAAAGCAGTGGTACATCATGGCGGTGCTGGAACAACAGCTGCTGGCCTCAAAGCAGCGTGCCCTACAACTATTGTACCTTTCTTTGGTGACCAACCATTCTGGGGAGACCGAGTGCATGCTAGAGGGGTAGGGCCTCTACCTATACCAGTTGATCAATTCAGCTTGCAAAAATTGGTTGATGCTATAAACTTCATGATGGAGCCAAAGGTGAAAGACAATGCCGTGGAGCTTGCCAAGGCCATGGAATCTGAAGATGGTGTGTCAGGTGCAGTCAGGGCATTCCTCAGACATCTACCTTCAAGAGCAGAGGAAACAGCACCTCAGCAGACATCCAGCTTCCTGGAATTCTTAGGTCCTGTAAGTAAATGTCTTGGTTGCTCATAGGTGACAGTGAGGCAATTATACAAAGAATGCCATTTCTCCCTGTTGAAAGAAGAGAATTTTGAACATCCCTGCAAGGATCAGGAGAACGGATTTCCTG  GAGAGTGTGCTTTATTATCTTTTATTTTTTTCCTTTTTGTGTATTTTTTCTCTTTTATTGTGTAAAAGGTGCTTGTCTATACATCATTTTGATGTGCATCGTTGCCCTGCTGGTCCTGCAACAAGTAAAGAATCTCACATGTACGACCAGTCCTTTCTGTGTATATGGAGAGAAGTGGAGAGGCACACGAATAGTTGAGTTGTCGATTGCTGCAATGATTCTAACCAAAGCTTCAGGTTTATTGTATTGGTCATATTGTACCTTTTATACCATTTTCTTTA                   ]
[+] EMBL CB628083             [CCTCGTCGTCTTCCCCCGCTGATGACAGGGGCCTCCCCAGATCAAGCACTATGCCAGGTGGGATTAATAATGTTGAAATAACCAATGAAACTGCTGGTCCATCTAATCTGGAAAGATCAAGAACAGAGAGGCGTCGACAAAACAATCCAGCTGATGATCCTACCAAACAGTTATTTGATGATAAAATTTCCCTAAAAAAGAAGCTCAAAATGATAAATCGGATAGCTACAGTGAAACATGATGGAACTGTGGTGGTTGATGTGCCAAGTTCTCTGGAAACAAGTACAACTGATGGTGTAGCATATGATGGCTATAGTGATGTTACTGTTGAGGAACCATTGGATGGAGCAGACATACCTGTGAGGCCTCCTATGCAAATTGTTATTCTTATTGTGGGCACAAGAGGTGATGTTCAGCCATTCATTGCTATAGGCAAACGCTTACAGGATTATGGACACCGTGTGAGATTGGCAACCCATGCAAACTTTAAGGAGTTCGTTCTAACGGCTGGTCTGGAGTTTTTCCCTCTTGGCGGTGATCCAAAAATACTTGCTGAATACATGGTGAAGAATAAAGGATTCTTGCCTTCTGGTCCTTCAGAAATTCCTATTCAGAc                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL AU173797             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  TGAATTCCCCCATCCTCTTTCTCGTGTGAAACAAGCGGCTGGATATCGACTTTCTTATCAAATTGTTGACTCTATGATTTGGCTTGGTATCCGAGATATGATAAATGAATTTAGGAAGAAGAAGCTGAAGTTGCGTCCGTTAACATACCTAAGTGGTGCACAGGGTTCTGGGAATGACATTCCTCATGGTTACATCTGGAGTCCTCACCTTGTTCCAAAACCGAAAGATTGGGGCCCTAAGATTGATGTTGTTGGATTTTGCTTTCTTGATCTTGCTTCCAATTATGTGCCTCCTGAACCACTTGTAAAATGGCTTGAAGCTGGTGACAAGCCCATATACGTTGGGTTTGGTAGTCTTCCAGTTCAAGATCCAGCAAAGATGACTGAAGTCATTGTCAAAGCACTTGAAATAACTGGACAGAGAGGTATCATCAACAAAGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL CB627045             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      GCAGTGGTACATCATGGCGGTGCTGGAACAACAGCTGCTGGCCTCAAAGCAGCGTGCCCTACAACTATTGTACCTTTCTTTGGTGACCAACCATTTTGGGGAGACCGAGTGCATGCTAGAGGGGTAGGGCCTCTACCTATACCAGTTGATCAATTCAGCTTGCAAAAATTGGTTGATGCTATAAACTTCATGATGGAGCCAAAGGTGAAAGACAATGCCGTGGAGCTTGCCAAGGCCATGGAATTTGAAGATGGTGTGTCAGGTGCAGTCAGGGCATTCCTCAGACATTTACCTTCAAGAGCAGAGGAAACAGCACCTCAGCAGACATCCAGCTTCCTGGAATTCTTAGGTCCTGTAAGTAAATGTCTTGGTTGCTCATAGGTGACAATGAGGCAATTACACAAAGAATGCCATTTTTCCCTGTTGAAAGAAGAGAATTTTGAACATCCCTGCAAGGATCAGGAGAACGGATTTCCTGGAGAGAGTGTGCTTTATTATCTTTTATTTTTTTCCTTTTTGTGTATTTTTTCTCTTTTATTGTGTAAAAGGTGCTTGTCTATACATCATTTTGATGTGCATCGTTGCCCTGCTGGTCCTGCAACAAGTTAAGAATTTCACATGTACGACCAGTCCTTTCTGTGTATATG  GAGAAGTGGAGAGGCACACGAATAGTTGAGTTGTCGATTGCTGCAATGATTTTAACCAAAGC                                                                     ]
[+] EMBL AU173798             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 AGGTCCTGTAAGTAAATGTCTTGGTTGCTCATAGGTGACAGTGAGGCAATTACACAAAGAATGCCATTTCTCCCTGTTGAAAGAAGAGAATTTTGAACATCCCTGCAAGGATCAGGAGAACGGATTTCCTG  GAGAGTGTGCTTTATTATCTTTTATTTTTTTCCTTTTTGTGTATTTTTTCTCTTTTATTGTGTAAAAGGTGCTTGTCTATACATCATTTTGATGTGCATCGTTGCCCTGCTGGTCCTGCAACAAGTAAAGAATCTCACATGTACGACCAGTCCTTTCTGTGTATATGGAGAGAAGTGGAGAGGCACACGAATAGTTGAGTTGTCGATTGCTGCAATGATTCTAACCAAAGCTTCAGGTTTATTGTATTGGTCATATTGTACCTTTTATACCATTTTCTTTAGTTCTCGTTTAAAAAAAAA]




>consensus_12728#0
CCTCGTCGTCTTCCCCCGCTGATGACAGGGGCCTCCCCAGATCAAGCACTATGCCAGGTG
GGATTAATAATGTTGAAATAACCAATGAAACTGCTGGTCCATCTAATCTGGAAAGATCAA
GAACAGAGAGGCGTCGACAAAACAATCCAGCTGATGATCCTACTAAACAGTTATTTGATG
ATAAAATTTCCCTAAAAAAGAAGCTCGAAATGCTAAATCGGATAGCTACAGTGAAAGATG
ATGGAACTGTGGTGGTTGATGTGCCAAGTTCTCTGGAAACAAGTACAACTGATGGTGTAG
CATATGATGGCTATAGTGATGTTACTGTTGAGGAACCATTGGATGGAGCAGACATATCTG
TGAGGCCTCCTATGGATATTGTTATTCTTATTGTGGGCACAAGAGGTGATGTTCAGCCAT
TCATTGCTATAGGCAAACGCTTACAGGATTATGGACACCGTGTGAGATTGGCAACCCATG
CAAACTTTAAGGAGTTCGTTCTAACGGCTGGTCTGGAGTTTTTCCCTCTTGGCGGTGATC
CAAAAACACTTGCTGAATACATGGTGAAGAATAAAGGATTCTTGCCTTCTGGTCCTTCAG
AAATTCCTATTCAGAGGAAACAGATGAAAGAAATTATATTCTCTTTGCTACCTGCGTGCA
AGGAGCCTGATCCTGACACTGGTATTCCTTTCAAAGTGGATGCTATCATTGCTAACCCTC
CAGCATATGGACATACTCATGTGGCAGAGGCACTAAAAGTACCTATTCATATATTCTTTA
CCATGCCATGGACGCCAACTAGTGAATTCCCCCATCCTCTTTCTCGTGTGAAACAAGCGG
CTGGATATCGACTTTCTTATCAAATTGTTGACTCTATGATTTGGCTTGGTATCCGAGATA
TGATAAATGAATTTAGGAAGAAGAAGCTGAAGTTGCGTCCGGTAACATACCTAAGTGGTG
CACAGGGTTCTGGGAATGACATTCCTCATGGTTACATCTGGAGTCCTCACCTTGTTCCAA
AACCGAAAGATTGGGGCCCTAAGATTGATGTTGTTGGATTTTGCTTTCTTGATCTTGCTT
CCAATTATGTGCCTCCTGAACCACTTGTAAAATGGCTTGAAGCTGGTGACAAGCCCATAT
ACGTTGGGTTTGGTAGTCTTCCAGTTCAAGATCCAGCAAAGATGACTGAAGTCATTGTCA
AAGCACTTGAAATAACTGGACAGAGAGGTATCATCAACAAAGGTTGGGGTGGGCTTGGAA
CATTGGCAGAGCCAAAAGATTTTGTATATCTACTTGATAACTGCCCCCATGACTGGCTCT
TCCTGCAGTGTAAAGCAGTGGTACATCATGGCGGTGCTGGAACAACAGCTGCTGGCCTCA
AAGCAGCGTGCCCTACAACTATTGTACCTTTCTTTGGTGACCAACCATTCTGGGGAGACC
GAGTGCATGCTAGAGGGGTAGGGCCTCTACCTATACCAGTTGATCAATTCAGCTTGCAAA
AATTGGTTGATGCTATAAACTTCATGATGGAGCCAAAGGTGAAAGACAATGCCGTGGAGC
TTGCCAAGGCCATGGAATCTGAAGATGGTGTGTCAGGTGCAGTCAGGGCATTCCTCAGAC
ATCTACCTTCAAGAGCAGAGGAAACAGCACCTCAGCAGACATCCAGCTTCCTGGAATTCT
TAGGTCCTGTAAGTAAATGTCTTGGTTGCTCATAGGTGACAGTGAGGCAATTACACAAAG
AATGCCATTTCTCCCTGTTGAAAGAAGAGAATTTTGAACATCCCTGCAAGGATCAGGAGA
ACGGATTTCCTGGAGAGTGTGCTTTATTATCTTTTATTTTTTTCCTTTTTGTGTATTTTT
TCTCTTTTATTGTGTAAAAGGTGCTTGTCTATACATCATTTTGATGTGCATCGTTGCCCT
GCTGGTCCTGCAACAAGTAAAGAATCTCACATGTACGACCAGTCCTTTCTGTGTATATGG
AGAGAAGTGGAGAGGCACACGAATAGTTGAGTTGTCGATTGCTGCAATGATTCTAACCAA
AGCTTCAGGTTTATTGTATTGGTCATATTGTACCTTTTATACCATTTTCTTTAGTTCTCG
TTTAAAAAAAAA

consensusID : consensus_12728#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 805
fasta sequence

                              [ATGGGCAGTCAGGATCATATTTTTTAAANCGAAAAGATCTTAATTTTTATAAGTTGCTCATNACAATTCTTTCTTACCGCTTCCAATTTGGTTTATTTTCTGATTTGAGGCATCCATTTCAGACCAATCATTTCTTGATTCATGCCTTATGATGGTGATGCTTTTCCTTTGGTGTGCAATTAATAGNCAGACTGACCTTAGTAATATACTTGGGAAGTTGACATCTTTAAAAGCTCTTTCTGTTTCGCCAATCTTTCTGGAGGCATCTCTTTTCAGGATTTTTCTGTGTTTATCACTTTGGAACCAATCATAGTCATTTCCAGCTCACATGATTAGGCAATGATGTGTTTACAAGGTGCTCTAGTGTGAATTTTTTTGCATGTTTTGTATTTTATGGTCCAGTAGCCAATTGCAATTCACTTCTATGAAAATTTATAAATGTTTCTTTGCTGCTGACCTTAACGATTATTCAGGACATACTCATGTGGCAGAGGCACTAAAAGTACCTATTCATATATTCTTTACCATGCCATGGACGCCAACTAGTGAATTCCCCCATCCTCTTTCTCGTGTGAAACAAGCGGCTGGATATCGACTTTCTTATCAAATTGTTGACTCTATGATTTGGCTTGGTATCCGAGATATGATAAATGAATTTAGGAAGAAGAAGCTGAAGTTGCGTCCGGTAACATACCTAAGTGGTGCACAGGGTTCTGGGAATGACATTCCTCATGGTTACATCTGGAGTCCTCACCTTGTTCCAAAACCGAAAGGTTCCTGATGAGTATTAGCTTTATCTAAATTT]

[-] EMBL CA764548             [ATGGGCAGTCAGGATCATATTTTTTAAANCGAAAAGATCTTAATTTTTATAAGTTGCTCATNACAATTCTTTCTTACCGCTTCCAATTTGGTTTATTTTCTGATTTGAGGCATCCATTTCAGACCAATCATTTCTTGATTCATGCCTTATGATGGTGATGCTTTTCCTTTGGTGTGCAATTAATAGNCAGACTGACCTTAGTAATATACTTGGGAAGTTGACATCTTTAAAAGCTCTTTCTGTTTCGCCAATCTTTCTGGAGGCATCTCTTTTCAGGATTTTTCTGTGTTTATCACTTTGGAACCAATCATAGTCATTTCCAGCTCACATGATTAGGCAATGATGTGTTTACAAGGTGCTCTAGTGTGAATTTTTTTGCATGTTTTGTATTTTATGGTCCAGTAGCCAATTGCAATTCACTTCTATGAAAATTTATAAATGTTTCTTTGCTGCTGACCTTAACGATTATTCAGGACATACTCATGTGGCAGAGGCACTAAAAGTACCTATTCATATATTCTTTACCATGCCATGGACGCCAACTAGTGAATTCCCCCATCCTCTTTCTCGTGTGAAACAAGCGGCTGGATATCGACTTTCTTATCAAATTGTTGACTCTATGATTTGGCTTGGTATCCGAGATATGATAAATGAATTTAGGAAGAAGAAGCTGAAGTTGCGTCCGGTAACATACCTAAGTGGTGCACAGGGTTCTGGGAATGACATTCCTCATGGTTACATCTGGAGTCCTCACCTTGTTCCAAAACCGAAAGGTTCCTGATGAGTATTAGCTTTATCTAAATTT]




>consensus_12728#1
ATGGGCAGTCAGGATCATATTTTTTAAANCGAAAAGATCTTAATTTTTATAAGTTGCTCA
TNACAATTCTTTCTTACCGCTTCCAATTTGGTTTATTTTCTGATTTGAGGCATCCATTTC
AGACCAATCATTTCTTGATTCATGCCTTATGATGGTGATGCTTTTCCTTTGGTGTGCAAT
TAATAGNCAGACTGACCTTAGTAATATACTTGGGAAGTTGACATCTTTAAAAGCTCTTTC
TGTTTCGCCAATCTTTCTGGAGGCATCTCTTTTCAGGATTTTTCTGTGTTTATCACTTTG
GAACCAATCATAGTCATTTCCAGCTCACATGATTAGGCAATGATGTGTTTACAAGGTGCT
CTAGTGTGAATTTTTTTGCATGTTTTGTATTTTATGGTCCAGTAGCCAATTGCAATTCAC
TTCTATGAAAATTTATAAATGTTTCTTTGCTGCTGACCTTAACGATTATTCAGGACATAC
TCATGTGGCAGAGGCACTAAAAGTACCTATTCATATATTCTTTACCATGCCATGGACGCC
AACTAGTGAATTCCCCCATCCTCTTTCTCGTGTGAAACAAGCGGCTGGATATCGACTTTC
TTATCAAATTGTTGACTCTATGATTTGGCTTGGTATCCGAGATATGATAAATGAATTTAG
GAAGAAGAAGCTGAAGTTGCGTCCGGTAACATACCTAAGTGGTGCACAGGGTTCTGGGAA
TGACATTCCTCATGGTTACATCTGGAGTCCTCACCTTGTTCCAAAACCGAAAGGTTCCTG
ATGAGTATTAGCTTTATCTAAATTT

consensusID : consensus_12728#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 694
fasta sequence

                              [GCAGTGTAAAGCAGTGGTACATCATGGCGGTGCTGGAACAACAGTTGCTGGCCTCAAAGCAGCGTGCCCTACAACTATTGTACCTTTCTTTGGTGACCAACCATTCTGGGGAGACCGAGTGCATGCTAGAGGGGTAGGGCCTCTACCTATACCAGTTGATCAATTCAGCTTGCAAAAATTGGTTGATGCTATAAACTTCATGATGGAGCCAAAGGTGAAAGACAATGCCGTGGAGCTTGCCAAGGCCATGGAATCTGAAGATGGTGTGTCAGGTGCAGTCAGGGCATTCCTCAGACATCTACCTTCAAGAGCAGAGGAAACAGCACCTCAGCAGACATCCAGCTTCCTGGAATTTTTAGGTCCTGTAAGTAAATGTCTTGGTTGCTCATAGGTGACAATGAGGCAATTACCCAAAGAATGCCATTTCTCCCTGTTGAAAGAAGAGAATTTTGAACATCCCTGCAAGGATCAGGAGAACGGATTTCCTGGAGAGAGTGTGCTTTATTATCTTTTATTTTTTTCCCTTTTGGGTATTTTTTTCTCTTTTATTGTGTAAAAGGTGCTTGTCTATACATCATTTTGATGTGGATCGTTGCCCTGCTGGTCCTGCAACAAGTTAAGAATTTCACATGTACGACCAGTCCCTTCTGTGTATATGGAGAAATGGAGAGGCCCCCGAAAAAAAAAAAAAAAA]

[-] EMBL CA763283             [GCAGTGTAAAGCAGTGGTACATCATGGCGGTGCTGGAACAACAGTTGCTGGCCTCAAAGCAGCGTGCCCTACAACTATTGTACCTTTCTTTGGTGACCAACCATTCTGGGGAGACCGAGTGCATGCTAGAGGGGTAGGGCCTCTACCTATACCAGTTGATCAATTCAGCTTGCAAAAATTGGTTGATGCTATAAACTTCATGATGGAGCCAAAGGTGAAAGACAATGCCGTGGAGCTTGCCAAGGCCATGGAATCTGAAGATGGTGTGTCAGGTGCAGTCAGGGCATTCCTCAGACATCTACCTTCAAGAGCAGAGGAAACAGCACCTCAGCAGACATCCAGCTTCCTGGAATTTTTAGGTCCTGTAAGTAAATGTCTTGGTTGCTCATAGGTGACAATGAGGCAATTACCCAAAGAATGCCATTTCTCCCTGTTGAAAGAAGAGAATTTTGAACATCCCTGCAAGGATCAGGAGAACGGATTTCCTGGAGAGAGTGTGCTTTATTATCTTTTATTTTTTTCCCTTTTGGGTATTTTTTTCTCTTTTATTGTGTAAAAGGTGCTTGTCTATACATCATTTTGATGTGGATCGTTGCCCTGCTGGTCCTGCAACAAGTTAAGAATTTCACATGTACGACCAGTCCCTTCTGTGTATATGGAGAAATGGAGAGGCCCCCGAAAAAAAAAAAAAAAA]




>consensus_12728#2
GCAGTGTAAAGCAGTGGTACATCATGGCGGTGCTGGAACAACAGTTGCTGGCCTCAAAGC
AGCGTGCCCTACAACTATTGTACCTTTCTTTGGTGACCAACCATTCTGGGGAGACCGAGT
GCATGCTAGAGGGGTAGGGCCTCTACCTATACCAGTTGATCAATTCAGCTTGCAAAAATT
GGTTGATGCTATAAACTTCATGATGGAGCCAAAGGTGAAAGACAATGCCGTGGAGCTTGC
CAAGGCCATGGAATCTGAAGATGGTGTGTCAGGTGCAGTCAGGGCATTCCTCAGACATCT
ACCTTCAAGAGCAGAGGAAACAGCACCTCAGCAGACATCCAGCTTCCTGGAATTTTTAGG
TCCTGTAAGTAAATGTCTTGGTTGCTCATAGGTGACAATGAGGCAATTACCCAAAGAATG
CCATTTCTCCCTGTTGAAAGAAGAGAATTTTGAACATCCCTGCAAGGATCAGGAGAACGG
ATTTCCTGGAGAGAGTGTGCTTTATTATCTTTTATTTTTTTCCCTTTTGGGTATTTTTTT
CTCTTTTATTGTGTAAAAGGTGCTTGTCTATACATCATTTTGATGTGGATCGTTGCCCTG
CTGGTCCTGCAACAAGTTAAGAATTTCACATGTACGACCAGTCCCTTCTGTGTATATGGA
GAAATGGAGAGGCCCCCGAAAAAAAAAAAAAAAA

consensusID : consensus_12728#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 529
fasta sequence

                              [GTTGATCAATTCAGCTTGCAAAAATTGGTGGAGGCTATAAATTTCATGAGGGAGCCAAAGGTGAAAGACAATCCCGGGGAGTTTGCCAAGGCCATGGAATTTGAAGATGGTGTTTCAGGTGCATTCAGGGCATTCTTCAGACATTTCCCTTCAAGAGCAGAGGAAACAGCCCCTCAGCAGACATCCAGTTTCCGGGAATTTTTAGGTCCTGTAAGAAAATTTTTTGGTTGTTCATAGGGGACAATGGGGCATTTCCCCAAAGAATGCCATTTTTCCCTGTTGAAAGAAGAGAATTTTGAACATCCCTGCAAGGATCGGGAGAAGGGATTTCTTGGAGAGAGGGGGCTTTATTATTTTTTATTTTTTTCCTTTTGGGGTATTTTTTTTTTTTTATTGGGAAAAAGGGGTTTGTTTATACATCATTTTGATGGGCATCGTTCCCCTGGGGGTCCTGCAACAAGTTAAGATTTTCCCATGTACGCCCAGTCCTTTTTGTGTATAGGGAGAAGTGGGGGGGCCCACGAATAGT]

[-] EMBL CB628084             [GTTGATCAATTCAGCTTGCAAAAATTGGTGGAGGCTATAAATTTCATGAGGGAGCCAAAGGTGAAAGACAATCCCGGGGAGTTTGCCAAGGCCATGGAATTTGAAGATGGTGTTTCAGGTGCATTCAGGGCATTCTTCAGACATTTCCCTTCAAGAGCAGAGGAAACAGCCCCTCAGCAGACATCCAGTTTCCGGGAATTTTTAGGTCCTGTAAGAAAATTTTTTGGTTGTTCATAGGGGACAATGGGGCATTTCCCCAAAGAATGCCATTTTTCCCTGTTGAAAGAAGAGAATTTTGAACATCCCTGCAAGGATCGGGAGAAGGGATTTCTTGGAGAGAGGGGGCTTTATTATTTTTTATTTTTTTCCTTTTGGGGTATTTTTTTTTTTTTATTGGGAAAAAGGGGTTTGTTTATACATCATTTTGATGGGCATCGTTCCCCTGGGGGTCCTGCAACAAGTTAAGATTTTCCCATGTACGCCCAGTCCTTTTTGTGTATAGGGAGAAGTGGGGGGGCCCACGAATAGT]




>consensus_12728#3
GTTGATCAATTCAGCTTGCAAAAATTGGTGGAGGCTATAAATTTCATGAGGGAGCCAAAG
GTGAAAGACAATCCCGGGGAGTTTGCCAAGGCCATGGAATTTGAAGATGGTGTTTCAGGT
GCATTCAGGGCATTCTTCAGACATTTCCCTTCAAGAGCAGAGGAAACAGCCCCTCAGCAG
ACATCCAGTTTCCGGGAATTTTTAGGTCCTGTAAGAAAATTTTTTGGTTGTTCATAGGGG
ACAATGGGGCATTTCCCCAAAGAATGCCATTTTTCCCTGTTGAAAGAAGAGAATTTTGAA
CATCCCTGCAAGGATCGGGAGAAGGGATTTCTTGGAGAGAGGGGGCTTTATTATTTTTTA
TTTTTTTCCTTTTGGGGTATTTTTTTTTTTTTATTGGGAAAAAGGGGTTTGTTTATACAT
CATTTTGATGGGCATCGTTCCCCTGGGGGTCCTGCAACAAGTTAAGATTTTCCCATGTAC
GCCCAGTCCTTTTTGTGTATAGGGAGAAGTGGGGGGGCCCACGAATAGT

consensusID : consensus_12728#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 493
fasta sequence

                              [CCTCGTCGTCTTCCCCCGCTGATGACAGGGGCCTCCCCAGATCAAGCACTATGCCAGAGAGGCGTCGACAAAACAATCCAGCTGATGATCCTACCAAACAGTTATTTGATGATAAAATTTCCCTAAAAAAGAAGCTCAAAATGATAAATCGGATAGCTACAGTGAAACATGATGGAACTGTGGTGGTTGATGTGCCAAGTTCTCTGGAAACAAGTACAACTGATGGTGTAGCATATGATGGCTATAGTGATGTTACTGTTGAGGAACCATTGGATGGAGCACACATACCTGTGAGGCCTCCTATGCAAATTGTTATTCTTATTGTGGGCACAAGAGGTGATGTTCAGCCATTCATTGCTATAGGCAAACGCTTACAGGATTATGGACACCGTGTGAGATTGGCAACCCATGCAAACTTTAAGGAGTTCGTTCTAACGGCTGGTCTGGAGTTTTTCCCTCTTGGCGGTGATCCAAAAATACTTGCTGAATACAT]

[+] EMBL CB618430             [CCTCGTCGTCTTCCCCCGCTGATGACAGGGGCCTCCCCAGATCAAGCACTATGCCAGAGAGGCGTCGACAAAACAATCCAGCTGATGATCCTACCAAACAGTTATTTGATGATAAAATTTCCCTAAAAAAGAAGCTCAAAATGATAAATCGGATAGCTACAGTGAAACATGATGGAACTGTGGTGGTTGATGTGCCAAGTTCTCTGGAAACAAGTACAACTGATGGTGTAGCATATGATGGCTATAGTGATGTTACTGTTGAGGAACCATTGGATGGAGCACACATACCTGTGAGGCCTCCTATGCAAATTGTTATTCTTATTGTGGGCACAAGAGGTGATGTTCAGCCATTCATTGCTATAGGCAAACGCTTACAGGATTATGGACACCGTGTGAGATTGGCAACCCATGCAAACTTTAAGGAGTTCGTTCTAACGGCTGGTCTGGAGTTTTTCCCTCTTGGCGGTGATCCAAAAATACTTGCTGAATACAT]




>consensus_12728#4
CCTCGTCGTCTTCCCCCGCTGATGACAGGGGCCTCCCCAGATCAAGCACTATGCCAGAGA
GGCGTCGACAAAACAATCCAGCTGATGATCCTACCAAACAGTTATTTGATGATAAAATTT
CCCTAAAAAAGAAGCTCAAAATGATAAATCGGATAGCTACAGTGAAACATGATGGAACTG
TGGTGGTTGATGTGCCAAGTTCTCTGGAAACAAGTACAACTGATGGTGTAGCATATGATG
GCTATAGTGATGTTACTGTTGAGGAACCATTGGATGGAGCACACATACCTGTGAGGCCTC
CTATGCAAATTGTTATTCTTATTGTGGGCACAAGAGGTGATGTTCAGCCATTCATTGCTA
TAGGCAAACGCTTACAGGATTATGGACACCGTGTGAGATTGGCAACCCATGCAAACTTTA
AGGAGTTCGTTCTAACGGCTGGTCTGGAGTTTTTCCCTCTTGGCGGTGATCCAAAAATAC
TTGCTGAATACAT

consensusID : consensus_12728#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 263
fasta sequence

                              [TGTANTTTTTCTCTTTTAATGTGTAAAAGGTGCTTGTCTANACATCATTTTGATGTGCATCGTTGCCCTGCTGGTCCTGCAACAAGTAAAGAATCTCACATGTACGACCAGTCCTTTCTGTGTATATGGAGAGAAGTGGAGAGGCACNCGAATAGTTGAGTTGTCGANTGCTGCAATGANTCTAACCAAANCTTCAGGTTTANTGTATTGGTCATANTGTACCTTTTATACCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAG]

[-] EMBL OSC104372            [TGTANTTTTTCTCTTTTAATGTGTAAAAGGTGCTTGTCTANACATCATTTTGATGTGCATCGTTGCCCTGCTGGTCCTGCAACAAGTAAAGAATCTCACATGTACGACCAGTCCTTTCTGTGTATATGGAGAGAAGTGGAGAGGCACNCGAATAGTTGAGTTGTCGANTGCTGCAATGANTCTAACCAAANCTTCAGGTTTANTGTATTGGTCATANTGTACCTTTTATACCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAG]




>consensus_12728#5
TGTANTTTTTCTCTTTTAATGTGTAAAAGGTGCTTGTCTANACATCATTTTGATGTGCAT
CGTTGCCCTGCTGGTCCTGCAACAAGTAAAGAATCTCACATGTACGACCAGTCCTTTCTG
TGTATATGGAGAGAAGTGGAGAGGCACNCGAATAGTTGAGTTGTCGANTGCTGCAATGAN
TCTAACCAAANCTTCAGGTTTANTGTATTGGTCATANTGTACCTTTTATACCAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAG

consensusID : consensus_12728#6
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 188
fasta sequence

                              [GTACGACCAGTCCTTTCTGTGTATATGGAGAGAAGTGGAGAGGCACACGAATAGTTGAGTTGTCGATTGCTGCAATGATTCTAACCAAAGCTTCAGGTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCCTGTCATGCCGTTACGTACCGTAT]

[+] EMBL CF299718             [GTACGACCAGTCCTTTCTGTGTATATGGAGAGAAGTGGAGAGGCACACGAATAGTTGAGTTGTCGATTGCTGCAATGATTCTAACCAAAGCTTCAGGTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCCTGTCATGCCGTTACGTACCGTAT]




>consensus_12728#6
GTACGACCAGTCCTTTCTGTGTATATGGAGAGAAGTGGAGAGGCACACGAATAGTTGAGT
TGTCGATTGCTGCAATGATTCTAACCAAAGCTTCAGGTTTAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCCTGTCATGCCGTTACG
TACCGTAT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12728#0      ------------------------------------------------------------
consensus_12728#4      ------------------------------------------------------------
consensus_12728#5      ------------------------------------------------------------
consensus_12728#6      ------------------------------------------------------------
consensus_12728#2      ------------------------------------------------------------
consensus_12728#3      ------------------------------------------------------------
consensus_12728#1      ATGGGCAGTCAGGATCATATTTTTTAAANCGAAAAGATCTTAATTTTTATAAGTTGCTCA 60
                                                                                   

consensus_12728#0      ---------------------CCTCGTCGTCTTCCCCCGCTGATGACAGGGGCCTCCCCA 39
consensus_12728#4      ---------------------CCTCGTCGTCTTCCCCCGCTGATGACAGGGGCCTCCCCA 39
consensus_12728#5      ------------------------------------------------------------
consensus_12728#6      ------------------------------------------------------------
consensus_12728#2      ----------------GCAGTGTAAAGCAGTGGTACATCATGGCGGTGCTGGAACAACAG 44
consensus_12728#3      ------------------------------------------------------------
consensus_12728#1      TNACAATTCTTTCTTACCGCTTCCAATTTGGTTTATTTTCTGATTTGAGGCATCCATTTC 120
                                                                                   

consensus_12728#0      GATCAAGCACTATGCCAGGTGGGATTAATAATGTTGAAATAACCAATGAAACTGCTGGTC 99
consensus_12728#4      GATCAAGCACTATGCCAG------------------------------------------ 57
consensus_12728#5      ------------------------------------------------------------
consensus_12728#6      ------------------------------------------------------------
consensus_12728#2      TTGCTGGCCTCAAAGCAGCGTGCCCTACAACTATTGTACCTTTCTTTGGTGACCAACCAT 104
consensus_12728#3      ------------------------------------------------------------
consensus_12728#1      AGACCAATCATTTCTTGATTCATGCCTTATGATGGTGATGCTTTTCCTTTGGTGTGCAAT 180
                                                                                   

consensus_12728#0      CATCTAATCTGGAAAGATCAAGAACAGAGAGGCGTCGACAAAACAATCCAGCTGATGATC 159
consensus_12728#4      ---------------------------AGAGGCGTCGACAAAACAATCCAGCTGATGATC 90
consensus_12728#5      ------------------------------------------------------------
consensus_12728#6      ------------------------------------------------------------
consensus_12728#2      TCTGGGGAGACCGAGTGCATGCTAGAGGGGTAGGGCCTCTACCTATACCAGTTGATCAAT 164
consensus_12728#3      --------------------------------------------------GTTGATCAAT 10
consensus_12728#1      TAATAGNCAGACTGACCTTAGTAATATACTTGGGAAGTTGACAT-CTTTAAAAGCTCTTT 239
                                                                                   

consensus_12728#0      CTACTAAACAGTTATTTGATGATAAAATTTCCCTAAAAAAGAAGCTCGAA--ATGCTAAA 217
consensus_12728#4      CTACCAAACAGTTATTTGATGATAAAATTTCCCTAAAAAAGAAGCTCAAA--ATGATAAA 148
consensus_12728#5      ------TGTANTTTTTCTCTTTTAATGTGTAAAAGGTGCTTGT-CTANAC--ATCATTTT 51
consensus_12728#6      ------------------------------------------------------------
consensus_12728#2      TCAGCTTGCAAAAATTGGTTGATGCTATAAACTTCATGATGGAGCCAAAG--GTGAAAGA 222
consensus_12728#3      TCAGCTTGCAAAAATTGGTGGAGGCTATAAATTTCATGAGGGAGCCAAAG--GTGAAAGA 68
consensus_12728#1      CTGTTTCGCCAATCTTTCTGGAGGCATCTCTTTTCAGGATTTTTCTGTGTTTATCACTTT 299
                                                                                   

consensus_12728#0      TCGGATAGCTACAGTGAA--AGATGATGGAACTGTGGTGGTTGATGTGCC----AAGTTC 271
consensus_12728#4      TCGGATAGCTACAGTGAA--ACATGATGGAACTGTGGTGGTTGATGTGCC----AAGTTC 202
consensus_12728#5      GATGTGCATCGTTGCCCT--GCTGGTCCTGCAACAAGTAAAGAATCTCAC----ATGTAC 105
consensus_12728#6      --------------------------------------------------------GTAC 4
consensus_12728#2      CAATGCCGTGGAGCTTGC--CAAGGCCATGGAATCTGAAGATGGTGTGTC----AGGTGC 276
consensus_12728#3      CAATCCCGGGGAGTTTGC--CAAGGCCATGGAATTTGAAGATGGTGTTTC----AGGTGC 122
consensus_12728#1      GGAACCAATCATAGTCATTTCCAGCTCACATGATTAGGCAATGATGTGTTTACAAGGTGC 359
                                                                               ** *

consensus_12728#0      TCTGGAAACAAGTACAAC------TGATGGTGTA-GCATATGATGGCTATAGTGATGTTA 324
consensus_12728#4      TCTGGAAACAAGTACAAC------TGATGGTGTA-GCATATGATGGCTATAGTGATGTTA 255
consensus_12728#5      -----GACCAGTCCTTTC------TGTGTATATG-------GAGAGAAGTGGAGA-GGCA 146
consensus_12728#6      -----GACCAGTCCTTTC------TGTGTATATG-------GAGAGAAGTGGAGA-GGCA 45
consensus_12728#2      -----AGTCAGGGCATTC------CTCAGACATCTACCTTCAAGAGCAGAGGAAACAGCA 325
consensus_12728#3      -----ATTCAGGGCATTC------TTCAGACATTTCCCTTCAAGAGCAGAGGAAACAGCC 171
consensus_12728#1      TCTAGTGTGAATTTTTTTGCATGTTTTGTATTTTATGGTCCAGTAGCCAATTGCAATTCA 419
                                *                      *            *        *     

consensus_12728#0      CTGTTGAGGAACCAT-TGGATGGAG---CAGACATATCTGTGAGGCCTCCTATGGATATT 380
consensus_12728#4      CTGTTGAGGAACCAT-TGGATGGAG---CACACATACCTGTGAGGCCTCCTATGCAAATT 311
consensus_12728#5      CN--CGAATAG---T-TGAGT-------TGTCGANTGCTGCAATGANTC-TAACCAAANC 192
consensus_12728#6      CA--CGAATAG---T-TGAGT-------TGTCGATTGCTGCAATGATTC-TAACCAAAGC 91
consensus_12728#2      CC--TCAGCAGACAT-CCAGC-------TTCCTGGAATTTTTAGGTCCTGTAAGTAAATG 375
consensus_12728#3      CC--TCAGCAGACAT-CCAGT-------TTCCGGGAATTTTTAGGTCCTGTAAGAAAATT 221
consensus_12728#1      CTTCTATGAAAATTTATAAATGTTTCTTTGCTGCTGACCTTAACGATTATTCAGGACATA 479
                       *        *    *                           * *     *    * *  

consensus_12728#0      GTTATTCTTATTGTGGGCACAAGAGGTGATGTTCAGCCATTCATTGCTATAGGCAAACG- 439
consensus_12728#4      GTTATTCTTATTGTGGGCACAAGAGGTGATGTTCAGCCATTCATTGCTATAGGCAAACG- 370
consensus_12728#5      TTCAGGTTTANTGTATTGG-TCATANTGTACCTTTTATACCAAAAAAAAAAAAAAAAAA- 250
consensus_12728#6      TTCAGGTTTAAAAAAAAAA-AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA- 149
consensus_12728#2      TCTTGGTTGCTCATAGGTG-ACAATGAGGCAATTACCCAAAGAATGCCATTTCTCCCTGT 434
consensus_12728#3      TTTTGGTTGTTCATAGGGG-ACAATGGGGCATTTCCCCAAAGAATGCCATTTTTCCCTGT 280
consensus_12728#1      CTCATG-TGGCAGAGGCACTAAAAGTACCTATTCATATATTCTTTACCATGCCATGGACG 538
                              *                              *         *           

consensus_12728#0      ----CTTACAGGATTATGGACACCGTGTGAGATTGGCAACCCATGCAAACTTTAAGGAGT 495
consensus_12728#4      ----CTTACAGGATTATGGACACCGTGTGAGATTGGCAACCCATGCAAACTTTAAGGAGT 426
consensus_12728#5      -AAAAAAAAAAAAG---------------------------------------------- 263
consensus_12728#6      -AAAAAAAAAAAACCCCTGTCATGCCGTTACGTACCGTAT-------------------- 188
consensus_12728#2      TGAAAGAAGAGAATTTTGAACATCCCTGCAAGGATCAGGAGAACGGATTTCCTGGAGAGA 494
consensus_12728#3      TGAAAGAAGAGAATTTTGAACATCCCTGCAAGGATCGGGAGAAGGGATTTCTTGGAGAGA 340
consensus_12728#1      CCAACTAGTGAATTCCCCCATCCTCTTTCTCGTGTGAAACAAGCGGCTGGATATCGACTT 598
                                                                                   

consensus_12728#0      TCGTTCTAACGGCTGGTCTGGAGTTTTTCCCTCTTGGCGGTGATCCAAAAACACTTGCTG 555
consensus_12728#4      TCGTTCTAACGGCTGGTCTGGAGTTTTTCCCTCTTGGCGGTGATCCAAAAATACTTGCTG 486
consensus_12728#5      ------------------------------------------------------------
consensus_12728#6      ------------------------------------------------------------
consensus_12728#2      GTGTGCTTTATTATCTTTTATTTTTTTCCCTTTTGGGTATTTTTTTCTCTTTTATTGTGT 554
consensus_12728#3      GGGGGCTTTATTATTTTTTATTTTTTTCCTTTTGGGGTATTTTTTT-TTTTTTATTGGGA 399
consensus_12728#1      TCTTATCAAATTGTTGACTCTATGATTTGGCTTGGTATCCGAGATATGATAAATGAATTT 658
                                                                                   

consensus_12728#0      AATACATGGTGAAGAATAAAGGATTCTTGCCTTCTGGTCCTTCAGAAATTCCTATTCAGA 615
consensus_12728#4      AATACAT----------------------------------------------------- 493
consensus_12728#5      ------------------------------------------------------------
consensus_12728#6      ------------------------------------------------------------
consensus_12728#2      AAAAGGTGCTTGTCTATACATCATTTTGATGTGGATCGTTGCCCTGCTGGTCCTGCAACA 614
consensus_12728#3      AAAAGGGGTTTGTTTATACATCATTTTGATGGGCATCGTTCCCCTGGGGGTCCTGCAACA 459
consensus_12728#1      AGGAAGAAGAAGCTGAAGTTGCGTCCGGTAACATACCTAAGTGGTGCACAGGGTTCTGGG 718
                                                                                   

consensus_12728#0      GGAAACAGATGAAAGAAATTATATTCTCTTTGCTACCTGCGTGCAAGGAGCCTGATCCTG 675
consensus_12728#4      ------------------------------------------------------------
consensus_12728#5      ------------------------------------------------------------
consensus_12728#6      ------------------------------------------------------------
consensus_12728#2      AGTTAAGAATTTCACATGTACGACCAGTCCCTTCTGTGTATATGGAGAAATGGAGAGGCC 674
consensus_12728#3      AGTTAAGATTTTCCCATGTACGCCCAGTCCTTTTTGTGTATAGGGAGAAGTGGGGGGGCC 519
consensus_12728#1      AATGACATTCCTCATGGTTACATCTGGAGTCCTCACCTTGTTCCAAAACCGAAAGGTTCC 778
                                                                                   

consensus_12728#0      ACACTGGTATTCCTTTCAAAGTGGATGCTATCATTGCTAACCCTCCAGCATATGGACATA 735
consensus_12728#4      ------------------------------------------------------------
consensus_12728#5      ------------------------------------------------------------
consensus_12728#6      ------------------------------------------------------------
consensus_12728#2      CCCGAAAAAAAAAAAAAAAA---------------------------------------- 694
consensus_12728#3      CACGAATAGT-------------------------------------------------- 529
consensus_12728#1      TGATGAGTATTAGCTTTATCTAAATTT--------------------------------- 805
                                                                                   

consensus_12728#0      CTCATGTGGCAGAGGCACTAAAAGTACCTATTCATATATTCTTTACCATGCCATGGACGC 795
consensus_12728#4      ------------------------------------------------------------
consensus_12728#5      ------------------------------------------------------------
consensus_12728#6      ------------------------------------------------------------
consensus_12728#2      ------------------------------------------------------------
consensus_12728#3      ------------------------------------------------------------
consensus_12728#1      ------------------------------------------------------------
                                                                                   

consensus_12728#0      CAACTAGTGAATTCCCCCATCCTCTTTCTCGTGTGAAACAAGCGGCTGGATATCGACTTT 855
consensus_12728#4      ------------------------------------------------------------
consensus_12728#5      ------------------------------------------------------------
consensus_12728#6      ------------------------------------------------------------
consensus_12728#2      ------------------------------------------------------------
consensus_12728#3      ------------------------------------------------------------
consensus_12728#1      ------------------------------------------------------------
                                                                                   

consensus_12728#0      CTTATCAAATTGTTGACTCTATGATTTGGCTTGGTATCCGAGATATGATAAATGAATTTA 915
consensus_12728#4      ------------------------------------------------------------
consensus_12728#5      ------------------------------------------------------------
consensus_12728#6      ------------------------------------------------------------
consensus_12728#2      ------------------------------------------------------------
consensus_12728#3      ------------------------------------------------------------
consensus_12728#1      ------------------------------------------------------------
                                                                                   

consensus_12728#0      GGAAGAAGAAGCTGAAGTTGCGTCCGGTAACATACCTAAGTGGTGCACAGGGTTCTGGGA 975
consensus_12728#4      ------------------------------------------------------------
consensus_12728#5      ------------------------------------------------------------
consensus_12728#6      ------------------------------------------------------------
consensus_12728#2      ------------------------------------------------------------
consensus_12728#3      ------------------------------------------------------------
consensus_12728#1      ------------------------------------------------------------
                                                                                   

consensus_12728#0      ATGACATTCCTCATGGTTACATCTGGAGTCCTCACCTTGTTCCAAAACCGAAAGATTGGG 1035
consensus_12728#4      ------------------------------------------------------------
consensus_12728#5      ------------------------------------------------------------
consensus_12728#6      ------------------------------------------------------------
consensus_12728#2      ------------------------------------------------------------
consensus_12728#3      ------------------------------------------------------------
consensus_12728#1      ------------------------------------------------------------
                                                                                   

consensus_12728#0      GCCCTAAGATTGATGTTGTTGGATTTTGCTTTCTTGATCTTGCTTCCAATTATGTGCCTC 1095
consensus_12728#4      ------------------------------------------------------------
consensus_12728#5      ------------------------------------------------------------
consensus_12728#6      ------------------------------------------------------------
consensus_12728#2      ------------------------------------------------------------
consensus_12728#3      ------------------------------------------------------------
consensus_12728#1      ------------------------------------------------------------
                                                                                   

consensus_12728#0      CTGAACCACTTGTAAAATGGCTTGAAGCTGGTGACAAGCCCATATACGTTGGGTTTGGTA 1155
consensus_12728#4      ------------------------------------------------------------
consensus_12728#5      ------------------------------------------------------------
consensus_12728#6      ------------------------------------------------------------
consensus_12728#2      ------------------------------------------------------------
consensus_12728#3      ------------------------------------------------------------
consensus_12728#1      ------------------------------------------------------------
                                                                                   

consensus_12728#0      GTCTTCCAGTTCAAGATCCAGCAAAGATGACTGAAGTCATTGTCAAAGCACTTGAAATAA 1215
consensus_12728#4      ------------------------------------------------------------
consensus_12728#5      ------------------------------------------------------------
consensus_12728#6      ------------------------------------------------------------
consensus_12728#2      ------------------------------------------------------------
consensus_12728#3      ------------------------------------------------------------
consensus_12728#1      ------------------------------------------------------------
                                                                                   

consensus_12728#0      CTGGACAGAGAGGTATCATCAACAAAGGTTGGGGTGGGCTTGGAACATTGGCAGAGCCAA 1275
consensus_12728#4      ------------------------------------------------------------
consensus_12728#5      ------------------------------------------------------------
consensus_12728#6      ------------------------------------------------------------
consensus_12728#2      ------------------------------------------------------------
consensus_12728#3      ------------------------------------------------------------
consensus_12728#1      ------------------------------------------------------------
                                                                                   

consensus_12728#0      AAGATTTTGTATATCTACTTGATAACTGCCCCCATGACTGGCTCTTCCTGCAGTGTAAAG 1335
consensus_12728#4      ------------------------------------------------------------
consensus_12728#5      ------------------------------------------------------------
consensus_12728#6      ------------------------------------------------------------
consensus_12728#2      ------------------------------------------------------------
consensus_12728#3      ------------------------------------------------------------
consensus_12728#1      ------------------------------------------------------------
                                                                                   

consensus_12728#0      CAGTGGTACATCATGGCGGTGCTGGAACAACAGCTGCTGGCCTCAAAGCAGCGTGCCCTA 1395
consensus_12728#4      ------------------------------------------------------------
consensus_12728#5      ------------------------------------------------------------
consensus_12728#6      ------------------------------------------------------------
consensus_12728#2      ------------------------------------------------------------
consensus_12728#3      ------------------------------------------------------------
consensus_12728#1      ------------------------------------------------------------
                                                                                   

consensus_12728#0      CAACTATTGTACCTTTCTTTGGTGACCAACCATTCTGGGGAGACCGAGTGCATGCTAGAG 1455
consensus_12728#4      ------------------------------------------------------------
consensus_12728#5      ------------------------------------------------------------
consensus_12728#6      ------------------------------------------------------------
consensus_12728#2      ------------------------------------------------------------
consensus_12728#3      ------------------------------------------------------------
consensus_12728#1      ------------------------------------------------------------
                                                                                   

consensus_12728#0      GGGTAGGGCCTCTACCTATACCAGTTGATCAATTCAGCTTGCAAAAATTGGTTGATGCTA 1515
consensus_12728#4      ------------------------------------------------------------
consensus_12728#5      ------------------------------------------------------------
consensus_12728#6      ------------------------------------------------------------
consensus_12728#2      ------------------------------------------------------------
consensus_12728#3      ------------------------------------------------------------
consensus_12728#1      ------------------------------------------------------------
                                                                                   

consensus_12728#0      TAAACTTCATGATGGAGCCAAAGGTGAAAGACAATGCCGTGGAGCTTGCCAAGGCCATGG 1575
consensus_12728#4      ------------------------------------------------------------
consensus_12728#5      ------------------------------------------------------------
consensus_12728#6      ------------------------------------------------------------
consensus_12728#2      ------------------------------------------------------------
consensus_12728#3      ------------------------------------------------------------
consensus_12728#1      ------------------------------------------------------------
                                                                                   

consensus_12728#0      AATCTGAAGATGGTGTGTCAGGTGCAGTCAGGGCATTCCTCAGACATCTACCTTCAAGAG 1635
consensus_12728#4      ------------------------------------------------------------
consensus_12728#5      ------------------------------------------------------------
consensus_12728#6      ------------------------------------------------------------
consensus_12728#2      ------------------------------------------------------------
consensus_12728#3      ------------------------------------------------------------
consensus_12728#1      ------------------------------------------------------------
                                                                                   

consensus_12728#0      CAGAGGAAACAGCACCTCAGCAGACATCCAGCTTCCTGGAATTCTTAGGTCCTGTAAGTA 1695
consensus_12728#4      ------------------------------------------------------------
consensus_12728#5      ------------------------------------------------------------
consensus_12728#6      ------------------------------------------------------------
consensus_12728#2      ------------------------------------------------------------
consensus_12728#3      ------------------------------------------------------------
consensus_12728#1      ------------------------------------------------------------
                                                                                   

consensus_12728#0      AATGTCTTGGTTGCTCATAGGTGACAGTGAGGCAATTACACAAAGAATGCCATTTCTCCC 1755
consensus_12728#4      ------------------------------------------------------------
consensus_12728#5      ------------------------------------------------------------
consensus_12728#6      ------------------------------------------------------------
consensus_12728#2      ------------------------------------------------------------
consensus_12728#3      ------------------------------------------------------------
consensus_12728#1      ------------------------------------------------------------
                                                                                   

consensus_12728#0      TGTTGAAAGAAGAGAATTTTGAACATCCCTGCAAGGATCAGGAGAACGGATTTCCTGGAG 1815
consensus_12728#4      ------------------------------------------------------------
consensus_12728#5      ------------------------------------------------------------
consensus_12728#6      ------------------------------------------------------------
consensus_12728#2      ------------------------------------------------------------
consensus_12728#3      ------------------------------------------------------------
consensus_12728#1      ------------------------------------------------------------
                                                                                   

consensus_12728#0      AGTGTGCTTTATTATCTTTTATTTTTTTCCTTTTTGTGTATTTTTTCTCTTTTATTGTGT 1875
consensus_12728#4      ------------------------------------------------------------
consensus_12728#5      ------------------------------------------------------------
consensus_12728#6      ------------------------------------------------------------
consensus_12728#2      ------------------------------------------------------------
consensus_12728#3      ------------------------------------------------------------
consensus_12728#1      ------------------------------------------------------------
                                                                                   

consensus_12728#0      AAAAGGTGCTTGTCTATACATCATTTTGATGTGCATCGTTGCCCTGCTGGTCCTGCAACA 1935
consensus_12728#4      ------------------------------------------------------------
consensus_12728#5      ------------------------------------------------------------
consensus_12728#6      ------------------------------------------------------------
consensus_12728#2      ------------------------------------------------------------
consensus_12728#3      ------------------------------------------------------------
consensus_12728#1      ------------------------------------------------------------
                                                                                   

consensus_12728#0      AGTAAAGAATCTCACATGTACGACCAGTCCTTTCTGTGTATATGGAGAGAAGTGGAGAGG 1995
consensus_12728#4      ------------------------------------------------------------
consensus_12728#5      ------------------------------------------------------------
consensus_12728#6      ------------------------------------------------------------
consensus_12728#2      ------------------------------------------------------------
consensus_12728#3      ------------------------------------------------------------
consensus_12728#1      ------------------------------------------------------------
                                                                                   

consensus_12728#0      CACACGAATAGTTGAGTTGTCGATTGCTGCAATGATTCTAACCAAAGCTTCAGGTTTATT 2055
consensus_12728#4      ------------------------------------------------------------
consensus_12728#5      ------------------------------------------------------------
consensus_12728#6      ------------------------------------------------------------
consensus_12728#2      ------------------------------------------------------------
consensus_12728#3      ------------------------------------------------------------
consensus_12728#1      ------------------------------------------------------------
                                                                                   

consensus_12728#0      GTATTGGTCATATTGTACCTTTTATACCATTTTCTTTAGTTCTCGTTTAAAAAAAAA 2112
consensus_12728#4      ---------------------------------------------------------
consensus_12728#5      ---------------------------------------------------------
consensus_12728#6      ---------------------------------------------------------
consensus_12728#2      ---------------------------------------------------------
consensus_12728#3      ---------------------------------------------------------
consensus_12728#1      ---------------------------------------------------------