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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12784#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1661 fasta sequence
[CGCAGAACCCTCACTCTCTCATGCCGCAATCACCATGAGCGCCGCCACCCCCGACTCCGCCGCCGCCGCCAAGCGCCCCATCGACCCCTCCCACGCCGACCCGTCGCCGGCGGCGAAGCTCCAGAGGTCGTCCCCGCCGGATCCCTCGCCGCCGGCTGAGGCGCAGGGCGACGCCACTGACGGCGGCGGCGAAGTGGCTGGGGTGAGAAGCGGGGAGATGGCCGGCGCGCGGAACCCTCAGGCGCAGCGGTACCTGGTCGCCGTGGAGTACGTCGGCACCCGGTTCTCCGGCTCCCAGCAGCAGCTCAACCAGCGCACCGTCGTCGGCGTCCTCGAGGAGGCATTTCACAAATTCATTGGTCAGCCAGTCTCAATCTTCTGTTCTAGTCGAACGGACACAGGTGTTCATGCTTTATCAAATGTTTGTCATGTTGACGTGGAGCGGATAAGTAAAAGAAAGCCTGGTGAAATGTTGCCACCTCATGAGCCTGGAGTTGTAAAACGTGCAGTGAACCATTTTCTACAGAAGAATGAAGGTGACATAATGGTGACTGATGTCCGTTGTGTTGCACCAGACTTCCATGCTAGATACAAAGCCCTAGAGCGCACGTACCACTATCGTTTGCTTTCTGGATCTGAGCCACTATCAGTTTTTGAGAAAACCTCTGCTTGGCACATACCCGAGGATTTAAATGTACAGGCAATGAAGAAAGCGTGCAGCATACTTGTTGGGCATCATGATTTCAGTTCATTTCGAGCAACTGGATGTCAGGCAAACTCTCCCATGAGAACTTTGGATGAGCTTAGTGTTACAGAAGTATTTCCTTCCATGTTTTTTCCTTCAAGCATGGAGCGATCAGAGATGGAGTCATTAGATGGGCATCTTGTTTATTCAAGAACGTCAGTTGTGGAATCTTCTGGAAAAGGATCTGATGCTTCTAGTACAAGTGAGCAATCAAGATTTGAGAATGGAGAAGAATTTGGAAAGAGGCTAAGGCAT-CGTTGCTTCGTTGTTACTGCACGGGCACGTTCATTTCTTTACCACCAGGTAAGGTTAATGGTTGGTCTTCTAAAATCTGTTGGTACTGGAGATCTAACAACTGAAGATGTTGAGAGAATTCTGAATTTAAAGGCAGTGACTGCGGCACCTCCTATGGCACCTGCTTGTGGTCTCTACCTTGCCAACGTGAAATATGACCTGAGCGTTTGAAGGCAGATTTCTGAAATGACCACAAGTTATGTCATGTTTTGTCTTTCAGAGGCCCATGTGTTTGAATTATTGAAATACTGAGTAGAGAGGTCCAGACGCACCTTGGAAAGGAAAATGCTTTCTCATGGTCCGAATTTTGTGCAAATCTGGAAAATTTTCCCCGATATTTATAAGATACTTTTGTGCACATGATGGAAGGACATGTATTTCCATGTTCTCATTAGTTTCGACTCCTATGTATTCAGATTATCAGATGTCAAGTCGCATAACATTCTCTATTGAATGTATGCACAAAGTTCTAGATCCTAGGACAAATTAAACTGTATATGTAAACTAGAGTGGCAGCTGACCCTTCCTTGATTATGCCTTATATTGTTTCATCTTCATTTCACACAGCACATACATTATGCAAACTGCATTGCATGGAATACATTTCACCTTCAATTCATAC]
[+] EMBL AK101810 [CGCAGAACCCTCACTCTCTCATGCCGCAATCACCATGAGCGCCGCCACCCCCGACTCCGCCGCCGCCGCCAAGCGCCCCATCGACCCCTCCCACGCCGACCCGTCGCCGGCGGCGAAGCTCCAGAGGTCGTCCCCGCCGGATCCCTCGCCGCCGGCTGAGGCGCAGGGCGACGCCACTGACGGCGGCGGCGAAGTGGCTGGGGTGAGAAGCGGGGAGATGGCCGGCGCGCGGAACCCTCAGGCGCAGCGGTACCTGGTCGCCGTGGAGTACGTCGGCACCCGGTTCTCCGGCTCCCAGCAGCAGCTCAACCAGCGCACCGTCGTCGGCGTCCTCGAGGAGGCATTTCACAAATTCATTGGTCAGCCAGTCTCAATCTTCTGTTCTAGTCGAACGGACACAGGTGTTCATGCTTTATCAAATGTTTGTCATGTTGACGTGGAGCGGATAAGTAAAAGAAAGCCTGGTGAAATGTTGCCACCTCATGAGCCTGGAGTTGTAAAACGTGCAGTGAACCATTTTCTACAGAAGAATGAAGGTGACATAATGGTGACTGATGTCCGTTGTGTTGCACCAGACTTCCATGCTAGATACAAAGCCCTAGAGCGCACGTACCACTATCGTTTGCTTTCTGGATCTGAGCCACTATCAGTTTTTGAGAAAACCTCTGCTTGGCACATACCCGAGGATTTAAATGTACAGGCAATGAAGAAAGCGTGCAGCATACTTGTTGGGCATCATGATTTCAGTTCATTTCGAGCAACTGGATGTCAGGCAAACTCTCCCATGAGAACTTTGGATGAGCTTAGTGTTACAGAAGTATTTCCTTCCATGTTTTTTCCTTCAAGCATGGAGCGATCAGAGATGGAGTCATTAGATGGGCATCTTGTTTATTCAAGAACGTCAGTTGTGGAATCTTCTGGAAAAGGATCTGATGCTTCTAGTACAAGTGAGCAATCAAGATTTGAGAATGGAGAAGAATTTGGAAAGAGGCTAAGGCAT CGTTGCTTCGTTGTTACTGCACGGGCACGTTCATTTCTTTACCACCAGGTAAGGTTAATGGTTGGTCTTCTAAAATCTGTTGGTACTGGAGATCTAACAACTGAAGATGTTGAGAGAATTCTGAATTTAAAGGCAGTGACTGCGGCACCTCCTATGGCACCTGCTTGTGGTCTCTACCTTGCCAACGTGAAATATGACCTGAGCGTTTGAAGGCAGATTTCTGAAATGACCACAAGTTATGTCATGTTTTGTCTTTCAGAGGCCCATGTGTTTGAATTATTGAAATACTGAGTAGAGAGGTCCAGACGCACCTTGGAAAGGAAAATGCTTTCTCATGGTCCGAATTTTGTGCAAATCTGGAAAATTTTCCCCGATATTTATAAGATACTTTTGTGCACATGGTGGAAGGACATGTATTTCCATGTTCTCATTAGTTTCGACTCCTATGTATTCAGATTATCAGATGTCAAGTCGCATAACATTCTCTATTGAATGTATGCACAAAGTTCTAGATCCTAGGACAAATTAAACTGTATATGTAAACTAGAGTGGCAGCTGACCCTTCCTTGATTATGCCTTATATTGTTTCATCTTCATTTCACACAGCACATACATTATGCAAACTGCATTGCATGGAATACATTTCACCTTCAATTCATAC]
[+] EMBL CA765287 [ ATTTGAGAATGGAGAAGAATTTGGAAAGCGGCTAAGGCAT CGTTGCTTCGTTGTTACTGCACGGGCACGTTCATTTCTTTACCACCAGGTAAGGTTAATGGTTGGTCTTCTAAAATCTGTTGGTACTGGAGATCTAACAACTGAAGATGTTGAGAGAATTCTGAATTTAAAGGCAGTGACTGCGGCACCTCCTATGGCACCTGCTTGTGGTCTCTACCTTGCCAACGTGAAATATGACCTGAGCGTTTGAAGGCAGATTTCTGAAATGACCACAAGTTATGTCAGGTTTTGTCTTTCAGAGGCCCATGTGTTTGAATTATTGAAATACTGAGTAGAGAGGTCCAGACGCACCTTGGAAAGGAAAATGCTTTCTCATGGTCCGAATTTTGTGCAAATCTGGAAATTTTTCCCCGATATTTATAAGATACTTTTGTGCACATGATGGAAGGACATGTATTTCCATGTTCTCATTAGTTTCGACTCCTATGTATTCAGATTATCAGATGTCAAGTCGCATAACATTCCCTATTGAATGTATGCACAAAGTTCTAGATCCTAGGACAAATTAAACTGTATATGTAAACTAGAGTGGCAGCTGGCCCTTCCTTGATTATGCCTTATATTGNTTCATCTTCATTTCACACAGCACATACATTATGCAAACTGCATTGCATGGAATACATTTCACCTTCAAT ]
[+] EMBL AU172571 [ GGAAAGAGGCTAAGGCAT CGTTGCTTCGTTGTTACTGCACGGGCACGTTCATTTCTTTACCACCAGGTAAGGTTAATGGTTGGTCTTCTAAAATCTGTTGGTACTGGAGATCTAACAACTGAAGATGTTGAGAGAATTCTGAATTTAAAGGCAGTGACTGCGGCACCTCCTATGGCACCTGCTTGTGGTCTCTACCTTGCCAACGTGAAATATGACCTGAGCGTTTGAAGGCAGATTTCTGAAATGACCACAAGTTATGTCATGTTTTGTCTTTCAGAGGCCCATGTGTTTGAATTATTGAAATACTGAGTAGAGAGGTCCAGACGCACCTTGGAAAGGAAAATGCTTTCTCATGGTCCGAATTTTGTGCAAATCTGGAAAATTTTCCCCGATATTTATAAGATACTTTTGTGCACATGATGGAAGGACATGTA ]
[+] EMBL AU101212 [ GAAAGAGNCTAAGGCATCCGTTGCTTCGTTGTTACTGCACGGGCACGTTCATTTCTTTACCACCAGGTAAGGTTAATGGTTGGTCTTCTAAAATCTGTTGGTACTGGAGATCTAACAACTGAAGATGTTGAGAGAATTCTGAATTTAAAGGCAGTGACTGCGGCACCTCCTATGGCACCTGCTTGTGGTCTCTACCTTGCCAACGTGAAATATGACCTGAGCGTTTGAAGGCAGATTTCTGAAATGACCACAAGTTATGTCATGTTTTGTCTTTCAGAGGCCCATGTGTTTGAATTATTGAAATACTGAGTAGAGAGGTCCAGACGCNCCTTGGAAAGGAAAATGCTTTCTCATGGTCCGAATTTTGTGCAAATCTGGAAAATTTTCCCCGATATTTATAAGATACTTTTGTGCACATGATGGAAGGACATGTATTTCCATGTTCTCATTAGTTTCGACTCCTATGTATTCAGATTATCAGATGTCAAGTCGCATAACATTCTCTATTGAATGTATGCACAAAGTTCTAGATCCTAGGACAAATTAAACTGTATATGTAAACTAGAGTGGCAGCTGACCCTTCCTTGATTATGCCTTATATTGTTTCATCTTCAaaaaaaaaa ]
consensusID : consensus_12784#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 878 fasta sequence
[GGAGCGGATAAGTAAAAGAAAGCCTGGTGAAATGTTGCCACCTCATGAGCCTGGAGTTGTAAAACGTGCAGTGAACCATTTTCTACAGAAGAATGAAGGTGACATAATGGTGACTGATGTCCGTTGTGTTGCACCAGACTTCCATGCTAGATACAAAGCCCTAGAGCGCACGTACCACTATCGTTTGCTTTCTGGATCTGAGCCACTATCAGTTTTTGAGAAAACCTCTGCTTGGCACATACCCGAGGATTTAAATGTACAGGCAATGAAGAAAGCGTGCAGCATACTTGTTGGGCATCATGATTTCAGTTCATTTCGAGCAACTGGATGTCAGGCAAACTCTCCCATGAGAACTTTGGATGAGCTTAGTGTTACAGAAGTATTTCCTTCCATGTTTTTTCCTTCAAGCATGGAGCGATCAGAGATGGAGTCATTAGATGGGCATCTTGTTTATTCAAGAACGTCAGTTGTGGAATCTTCTGGAAAAGGATCTGATGCTTCTAGTACAAGTGAGCAATCAAGATTTGAGAATGGAGAAGAATTTGGAAAGCGGCTAAGGCATCGTTGCTTCGTTGTTACTGCACGGGTAAGGCTAATGGTTGGTCTTCTAAAATCTGNTGGTACTGGAGATCTAACAACTGAAGATGNTGAGAGAATTCTGAATTTAAAGGCAGNGACTGCGGCACCTNCTATGGCACCTGCTTGGTGGTCTCTACCCTTGGCCAACGNGGAAATATGACCCCGAGCGNTTGGAGGCAGATTTCTGAAATGACCACAAGTTATGTCAGGTTTTGGCTTTTANAGGCCCATGGGNTTGGANTATTGNAANACTGAGTAGAGAGGTCCAGACNCNCCTTGGAAAGGAAAAGGCTTTTNTC]
[+] EMBL CA764031 [GGAGCGGATAAGTAAAAGAAAGCCTGGTGAAATGTTGCCACCTCATGAGCCTGGAGTTGTAAAACGTGCAGTGAACCATTTTCTACAGAAGAATGAAGGTGACATAATGGTGACTGATGTCCGTTGTGTTGCACCAGACTTCCATGCTAGATACAAAGCCCTAGAGCGCACGTACCACTATCGTTTGCTTTCTGGATCTGAGCCACTATCAGTTTTTGAGAAAACCTCTGCTTGGCACATACCCGAGGATTTAAATGTACAGGCAATGAAGAAAGCGTGCAGCATACTTGTTGGGCATCATGATTTCAGTTCATTTCGAGCAACTGGATGTCAGGCAAACTCTCCCATGAGAACTTTGGATGAGCTTAGTGTTACAGAAGTATTTCCTTCCATGTTTTTTCCTTCAAGCATGGAGCGATCAGAGATGGAGTCATTAGATGGGCATCTTGTTTATTCAAGAACGTCAGTTGTGGAATCTTCTGGAAAAGGATCTGATGCTTCTAGTACAAGTGAGCAATCAAGATTTGAGAATGGAGAAGAATTTGGAAAGCGGCTAAGGCATCGTTGCTTCGTTGTTACTGCACGGGTAAGGCTAATGGTTGGTCTTCTAAAATCTGNTGGTACTGGAGATCTAACAACTGAAGATGNTGAGAGAATTCTGAATTTAAAGGCAGNGACTGCGGCACCTNCTATGGCACCTGCTTGGTGGTCTCTACCCTTGGCCAACGNGGAAATATGACCCCGAGCGNTTGGAGGCAGATTTCTGAAATGACCACAAGTTATGTCAGGTTTTGGCTTTTANAGGCCCATGGGNTTGGANTATTGNAANACTGAGTAGAGAGGTCCAGACNCNCCTTGGAAAGGAAAAGGCTTTTNTC]
consensusID : consensus_12784#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 632 fasta sequence
[TTTGTCATTTCAGTCTTTCTTTGTATAGGACTCTAGGATATTTACGGAAGGATTTAATTACAGTTATTAAGATCAAGTGACCCAGTATTTTTTGTCCTAGCTGCAACAACATACATGTTTTGTTTTGTTTGTTAGTATCAGATTGAAGGCAAGTGGCTGCTGAAAAATGGATGTTGACTTGTTGACTGCAGTTGAATAATACGAAGTCCAGTGCTTTGTTAAAAGATAATATTATCATAAACATTGTCATTTGCAAAATGCTCCTCTTATTGTTGGAATGACTAGTCAAATACCACTTGATAGATTACTTCTACAGCCTCAACTTATTACTAGTTGTGAAATGTTAATTGATGCTAAATGTAGTTCACACGTCACACCCATGCTTTTGAATTATTTCAGGAGGCATTTCACAAATTCATTGGTCAGCCAGTCTCAATCTTCTGTTCTAGTCGAACGGACACAGGTGTTCATGCTTTATCAAATGTTTGTCATGTTGACGTGGAGCGGATAAGTAAAAGAAAGCCTGGTGAAATGTTGCCACCTCATGAGCCTGGAGTTGTAAAACGTGCAGTGAACCATTTTCTACAGGCAAGTTTTTGACCCAATCTTGTTATAGTTTCATTCACCTACAA]
[+] EMBL CF304322 [TTTGTCATTTCAGTCTTTCTTTGTATAGGACTCTAGGATATTTACGGAAGGATTTAATTACAGTTATTAAGATCAAGTGACCCAGTATTTTTTGTCCTAGCTGCAACAACATACATGTTTTGTTTTGTTTGTTAGTATCAGATTGAAGGCAAGTGGCTGCTGAAAAATGGATGTTGACTTGTTGACTGCAGTTGAATAATACGAAGTCCAGTGCTTTGTTAAAAGATAATATTATCATAAACATTGTCATTTGCAAAATGCTCCTCTTATTGTTGGAATGACTAGTCAAATACCACTTGATAGATTACTTCTACAGCCTCAACTTATTACTAGTTGTGAAATGTTAATTGATGCTAAATGTAGTTCACACGTCACACCCATGCTTTTGAATTATTTCAGGAGGCATTTCACAAATTCATTGGTCAGCCAGTCTCAATCTTCTGTTCTAGTCGAACGGACACAGGTGTTCATGCTTTATCAAATGTTTGTCATGTTGACGTGGAGCGGATAAGTAAAAGAAAGCCTGGTGAAATGTTGCCACCTCATGAGCCTGGAGTTGTAAAACGTGCAGTGAACCATTTTCTACAGGCAAGTTTTTGACCCAATCTTGTTATAGTTTCATTCACCTACAA]
[+] EMBL CF303113 [TTTGTCATTTCAGTCTTTCTTTGTATAGGACTCTAGGATATTTACGGAAGGATTTAATTACAGTTATTAAGATCAAGTGACCCAGTATTTTTTGTCCTAGCTGCAACAACATACATGTTTTGTTTTGTTTGTTAGTATCATATTGAAGGCAAGTGGCTGCTGAAAAATGGATGTTGACTTGTTGACTGCAGTTGAATAATACGAAGTCCAGTGCTTTGTTAAAAGATAATATTATCATAAACATTGTCATTTGCAAAATGCTCCTCTTATTGTTGGAATGACTAGTCAAATACCACTTGATAGATTACTTCTACAGCCTCAACTTATTACTAGTTGTGAAATGTTAATTGATGCTAAATGTAGTTCACACGTCACACCCATGCTTTTGAATTATTTCAGGAGGCATTTCACAAATTCATTGGTCAGCCAGTCTCAATCTTCTGTTCTAGTCGAACGGACACAGGTGTTCATGCTTTATCAAATGTTTGTCATGTTGAC ]
[+] EMBL CF304753 [TTTGTCATTTCAGTCTTTCTTTGTATAGGACTCTAGGATATTTACGGAAGGATTTAATTACAGTTATTAAGATCAAGTGACCCAGTATTTTTTGTCCTAGCTGCAACAACATACATGTTTTGTTTTGTTTGTTAGTATCAGATTGAAGGCAAGTGGCTGCTGAAAAATGGATGTTGACTTGTTGACTGCAGTTGAATAATACGAAGTCCAGTGCTTTGTTAAAAGATAATATTATCATAAACATTGTCATTTGCAAAATGCTCCTCTTATTGTTGGAATGACTAGTCAAATACCACTTGATAGATTACTTCTACAGCCTCAACTTATTACTAGTTGTGAAATGTTAATTGATGCTAAATGTAGTTCACACGTCACACCCATGCTTTTGAATTATTTCAGGAGGCATTTCACAAATTCATTGGTCAGCCAGTCTCAATCTTCTGTTCTAGTCGAACGGACACAG ]
[+] EMBL CF304709 [TTTGTCATTTCAGTCTTTCTTTGTATAGGACTCTAGGATATTTACGGAAGGATTTAATTACAGTTATTAAGATCAAGTGACCCAGTATTTTTTGTCCTAGCTGCAACAACATACATGTTTTGTTTTGTTTGTTAGTATCAGATTGAAGGCAAGTGGCTGCTGAAAAATGGATGTTGACTTGTTGACTGCAGTTGAATAATACGAAGTCCAGTGCTTTGTTAAAAGATAATATTATCATAAACATTGTCATTTGCAAAATGCTCCTCTTATTGTTGGAATGACTAGTCAAATACCACTTGATAGATTACTTCTACAGCCTCAACTTATTACTAGTTGTGAAATGTTAATTGATGCTAAATGTAGTTCACACGTCACACCCATGCTTTTGAATTATTTCAGGAGGCATTTCACAAATTCATTGGTCAGCCAGTCTCAATCTTCTGTTCTAGTC ]
consensusID : consensus_12784#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 526 fasta sequence
[GCAGAACCCTCACTCTCTCATGCCGCAATCACCATGAGCGCCGCCACCCCCGACTCCGCCGCCGCC-GC-CAAGCGCCCCATCGACCCC-TCCCACGCCGACCCGTCGCCGGC-GGC-GAAGCTCCAGAGGTCGTCCCCGCCGGATCCCTCGCC-GCC-GGCTGAGGC-GCAGGGC-GACGCCACTGAC-GGC-GGC-GGC-GAAGTGGCTGGGGTGAGAAGCGGGGAGATGGCC-GGC-GC-GC-GGAACCCTCAGGC-GCAGC-GGTACCTGGTC-GCCGTGGAGTACGTCGGCACCCGGTTCTCCGGCTCCCAGCAGCAGCTCAACCAGCGCACCGTCGTCGGCGTCCTCGAGGTGAAATGCTTCTAATCTGAGCTGTGGATTCGAAATGGCGACCGTAATCTGCACTGCTACGGATGT-CCCTGGTACTAGGTAGCTACACAAATTTTCTGAAATCGGTAGGGGCTTGGGGCAGATTTACGAAGGATGAAAGTCCGTGAGAATATGAAGCATGTATACTCGTCTTTTGCTGGTCTAACTGAAT]
[+] EMBL AK107780 [GCAGAACCCTCACTCTCTCATGCCGCAATCACCATGAGCGCCGCCACCCCCGACTCCGCCGCCGCC GC CAAGCGCCCCATCGACCCC TCCCACGCCGACCCGTCGCCGGC GGC GAAGCTCCAGAGGTCGTCCCCGCCGGATCCCTCGCC GCC GGCTGAGGC GCAGGGC GACGCCACTGAC GGC GGC GGC GAAGTGGCTGGGGTGAGAAGCGGGGAGATGGCC GGC GC GC GGAACCCTCAGGC GCAGC GGTACCTGGTC GCCGTGGAGTACGTCGGCACCCGGTTCTCCGGCTCCCAGCAGCAGCTCAACCAGCGCACCGTCGTCGGCGTCCTCGAGGTGAAATGCTTCTAATCTGAGCTGTGGATTCGAAATGGCGACCGTAATCTGCACTGCTACGGATGT CCCTGGTACTAGGTAGCTACACAAATTTTCTGAAATCGGTAGGGGCTTGGGGCAGATTTACGAAGGATGAAAGTCCGTGAGAATATGAAGCATGTATACTCGTCTTTTGCTGGTCTAACTGAAT]
[+] EMBL BI804201 [ CTCTCTCATGCCGCAATCACCATGAGCGCCGCCACCCCCGACTCCGCCGCCGCCAGCACAAGCGCCCCATCGACCCCGTCCCACGCCGACCCGTCGCCGGCAGGCAGAAGCTCCAGAGGTCGTCCCCGCCGGATCCCTCGCCAGCCAGGCTGAGGCAGCAGGGCAGACACCACTGACAGGCAGGCAGGCAGAAGTGGCTGGGGTGAGAAGCGGGGAGATGGCCAGGCAGCAGCAGGAACCCTCAGGCAGCAGCAGGTACCTGGTCAGCCGTGGAGTACGTCGGCACCCGGTTCTCCGGCTCCCAGCAGCAGCTCAACCAGCGCACCGTCGTCGGCGTCCTCGAGGTGAAATGCTTCTAATCTGAGCTGTGGATTCGAAATGGCGACTGTAATCTGCACTGCTACGGATGTCCCCTGGTACTAGGTAGCTACACAAATTTTCTGAAATCGGTAGGGGCTT GGGCAGATTTACGAAGGATGAAAGTCCATGAGAATATGAAGCATGTATACTCGTCTTTTGCTGGTCTAAaaa ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_12784#0 CGCAGAACCCTCACTCTCTCATGCCGCAATCACCATGAGCGCCGCCACCCCCGACTCCGC 60
consensus_12784#1 ------------------------------------------------------------
consensus_12784#3 ------------------------------------------------------------
consensus_12784#2 ------------------------------------------------------------
consensus_12784#0 CGCCGCCGCCAAGCGCCCCATCGACCCCTCCCACGCCGACCCGTCGCCGGCGGCGAAGCT 120
consensus_12784#1 ------------------------------------------------------------
consensus_12784#3 ------------------------------------------------------------
consensus_12784#2 ------------------------------------------------------------
consensus_12784#0 CCAGAGGTCGTCCCCGCCGGATCCCTCGCCGCCGGCTGAGGCGCAGGGCGACGCCACTGA 180
consensus_12784#1 ------------------------------------------------------------
consensus_12784#3 ------------------------------------------------------------
consensus_12784#2 ------------------------------------------------------------
consensus_12784#0 CGGCGGCGGCGAAGTGGCTGGGGTGAGAAGCGGGGAGATGGCCGGCGCGCGGAACCCTCA 240
consensus_12784#1 ------------------------------------------------------------
consensus_12784#3 ------------------------------------------------------------
consensus_12784#2 ------------------------------------------------------------
consensus_12784#0 GGCGCAGCGGTACCTGGTCGCCGTGGAGTACGTCGGCACCCGGTTCTCCGGCTCCCAGCA 300
consensus_12784#1 ------------------------------------------------------------
consensus_12784#3 ------------------------------------------------------------
consensus_12784#2 ------------------------------------------------------------
consensus_12784#0 GCAGCTCAACCAGCGCACCGTCGTCGGCGTCCTCGAGGAGGCATTTCACAAATTCATTGG 360
consensus_12784#1 ------------------------------------------------------------
consensus_12784#3 ------------------------------------------------------------
consensus_12784#2 ------------------------------------------------------------
consensus_12784#0 TCAGCCAGTCTCAATCTTCTGTTCTAGTCGAACGGACACAGGTGTTCATGCTTTATCAAA 420
consensus_12784#1 ------------------------------------------------------------
consensus_12784#3 ------------------------------------------------------------
consensus_12784#2 ------------------------------------------------------------
consensus_12784#0 TGTTTGTCATGTTGACGTGGAGCGGATAAGTAAAAGAAAGCCTGGTGAAATGTTGCCACC 480
consensus_12784#1 ------------------GGAGCGGATAAGTAAAAGAAAGCCTGGTGAAATGTTGCCACC 42
consensus_12784#3 ------------------------------------------------------------
consensus_12784#2 ------------------------------------------------------------
consensus_12784#0 TCATGAGCCTGGAGTTGTAAAACGTGCAGTGAACCATTTTCTACAGAAGAATGAAGGTGA 540
consensus_12784#1 TCATGAGCCTGGAGTTGTAAAACGTGCAGTGAACCATTTTCTACAGAAGAATGAAGGTGA 102
consensus_12784#3 ------------------------------------------------------------
consensus_12784#2 ------------------------------------------------------------
consensus_12784#0 CATAATGGTGACTGATGTCCGTTGTGTTGCACCAGACTTCCATGCTAGATACAAAGCCCT 600
consensus_12784#1 CATAATGGTGACTGATGTCCGTTGTGTTGCACCAGACTTCCATGCTAGATACAAAGCCCT 162
consensus_12784#3 ------------------------------------------------------------
consensus_12784#2 ------------------------------------------------------------
consensus_12784#0 AGAGCGCACGTACCACTATCGTTTGCTTTCTGGATCTGAGCCACTATCAGTTTTTGAGAA 660
consensus_12784#1 AGAGCGCACGTACCACTATCGTTTGCTTTCTGGATCTGAGCCACTATCAGTTTTTGAGAA 222
consensus_12784#3 ------------------------------------------------------------
consensus_12784#2 ---------------------TTTGTCATTTCAGTCTTTCTTTGTATAGGACTCTAGGAT 39
consensus_12784#0 AACCTCTGCTTGGCACATACCCGAGGATTTAAATGTACAGGCAATGAAGAAAGCGTGC-A 719
consensus_12784#1 AACCTCTGCTTGGCACATACCCGAGGATTTAAATGTACAGGCAATGAAGAAAGCGTGC-A 281
consensus_12784#3 ----------------------------------GCAGAACCC-TCACTCTCTCATGC-C 24
consensus_12784#2 ATTTACGGAAGGATTTAATTACAGTTATTAAGATCAAGTGACCCAGTATTTTTTGTCCTA 99
* * * *
consensus_12784#0 GCATACTTGTTGGGCATCATGATTTCAG--TTCATTTCGAGCAACTGGATGTCAGGCAAA 777
consensus_12784#1 GCATACTTGTTGGGCATCATGATTTCAG--TTCATTTCGAGCAACTGGATGTCAGGCAAA 339
consensus_12784#3 GCAATCACCATGAGCGCCGCCACCCCCGACTCCGCCGCCGCCGCCAAGCGCCCCATCGAC 84
consensus_12784#2 GCTGCAACAACATACATGTTTTGTTTTG--TTTGTTAGTATCAGATTGAAGGCAAGTGGC 157
** * * * * * *
consensus_12784#0 CTCTCCCATGAGAACTT-TGGATGAGCTTAGTGTTACAGAAGTATTTCCTTCCATGTTTT 836
consensus_12784#1 CTCTCCCATGAGAACTT-TGGATGAGCTTAGTGTTACAGAAGTATTTCCTTCCATGTTTT 398
consensus_12784#3 CCCTCCCACGCCGACCCGTCGCCGGCGGCGAAGCTCCAGAGGTCGTCCCCGCCGGATCCC 144
consensus_12784#2 TGCTGAAAAATGGATGT--TGACTTGTTGACTGCAGTTGAATAATACGAAGTCCAGTGCT 215
** * * * * ** * *
consensus_12784#0 TTCCTTCAAGCATGGAGCGATCAGAGATGGAGTCATTAGATGGGCATCTTGTTTATTCAA 896
consensus_12784#1 TTCCTTCAAGCATGGAGCGATCAGAGATGGAGTCATTAGATGGGCATCTTGTTTATTCAA 458
consensus_12784#3 TCGCCGCCGGC-TGAGGCG--CAG-GGCGACGCCACT-GACGGCGGCGGCG-------AA 192
consensus_12784#2 TTGTTAAAAGA-TAATATTATCATAAACATTGTCATTTGCAAAATGCTCCTCTTATT-GT 273
* * * ** * ** * *
consensus_12784#0 GAACGTCAGTTGTGGAATCTT-CTGGAAAAGGATCTGATGCTTCTAGTACAAGTGAGCAA 955
consensus_12784#1 GAACGTCAGTTGTGGAATCTT-CTGGAAAAGGATCTGATGCTTCTAGTACAAGTGAGCAA 517
consensus_12784#3 GTGGCTGGGGTGAGAAGC------GGGGAGATGGCCGGCGCGCGGAACCCTCAGGCGCAG 246
consensus_12784#2 TGGAATGACTAGTCAAATACCACTTGATAGATTACTTCTACAGCCTCAACTTATTACTAG 333
* * * * * * * * *
consensus_12784#0 TCAAGATTTGAGAATGG-AGAAGAATTTGGAAAGAGGCTAAGGCATCGTTGCTTCGTTGT 1014
consensus_12784#1 TCAAGATTTGAGAATGG-AGAAGAATTTGGAAAGCGGCTAAGGCATCGTTGCTTCGTTGT 576
consensus_12784#3 -CGGTACCTGGTCGCCG-TGGAGTACGTCGGCACCCGGT------TCTCCGGCTCCCAGC 298
consensus_12784#2 TTGTGAAATGTTAATTGATGCTAAATGTAGTTCACACGTCA--CACCCATGCTTTTGAAT 391
* ** * * * * * * * * *
consensus_12784#0 TACTGCACGGGCACGTTCATTTCTTTACCACCAGGTAAGGTTAATGGTTGGTCTTCTAAA 1074
consensus_12784#1 TACTGCACGGG------------------------TAAGGCTAATGGTTGGTCTTCTAAA 612
consensus_12784#3 AGCAGCTCAA------------------------------CCAGCGCACCGTCGTCGGCG 328
consensus_12784#2 TATTTCAGGAGGCATTTCA----------------CAAATTCATTGGTCAGCCAGTCTCA 435
* * * * *
consensus_12784#0 ATCTGTTGGTACTGGAGATCTAACAACTGAAGATGTTGAGAGAATTCTGAATTTAAAGGC 1134
consensus_12784#1 ATCTGNTGGTACTGGAGATCTAACAACTGAAGATGNTGAGAGAATTCTGAATTTAAAGGC 672
consensus_12784#3 TCCTCGAGG---TGAAATGCTTCTAATCTGAGCTGT-----GGATTCGAAAT--GGCGAC 378
consensus_12784#2 ATCTTCTG----TTCTAGTCGAACGGACACAGGTGTT-----CATGCTTTATCAAATGTT 486
** * * * ** ** ** * ** *
consensus_12784#0 AGTGACTGCGGCACCTCCTATGGCACCTGCTTG-TGGTCTCTACCTT--GCCAACGTG-A 1190
consensus_12784#1 AGNGACTGCGGCACCTNCTATGGCACCTGCTTGGTGGTCTCTACCCTTGGCCAACGNGGA 732
consensus_12784#3 CGTAAT--CTGCAC-TGCTACGG-ATGTCCCTGGTACTAGGTAGCTAC-ACAAATTTT-- 431
consensus_12784#2 TGTCAT-GTTG-ACGTGGAGCGG------ATAAGTAAAAGAAAGCCTGGTGAAATGTT-- 536
* * * ** * ** * * * **
consensus_12784#0 AATATGACCT-GAGCGTTTGAAG--GCAGATTTCTGAAATGACCACAAGTTATGTCATGT 1247
consensus_12784#1 AATATGACCCCGAGCGNTTGGAG--GCAGATTTCTGAAATGACCACAAGTTATGTCAGGT 790
consensus_12784#3 -CTGAAATCGGTAGGGGCTTGGG--GCAGATTTACGAAG-GATGAAAGTCCGTGAGAATA 487
consensus_12784#2 ---GCCACCTCATGAGCCTGGAGTTGTAAAACGTGCAGTGAACCATTTTCTACAGGCAAG 593
* * * * * * * * * * * *
consensus_12784#0 TTTGTCTTTCAGAGGCCCATGTGTTTGAATTATTGAAATACTGAGTAGAGAGGTCCAGAC 1307
consensus_12784#1 TTTGGCTTTTANAGGCCCATGGGNTTGGANTATTGNAANACTGAGTAGAGAGGTCCAGAC 850
consensus_12784#3 TGAAGCATGTATACTCGTCTTTTGCTGGTCTAACTGAAT--------------------- 526
consensus_12784#2 TTTTTGACCCAATCTTGTTATAGTTTCATTCACCTACAA--------------------- 632
* * * * *
consensus_12784#0 GCACCTTGGAAAGGAAAATGCTTTCTCATGGTCCGAATTTTGTGCAAATCTGGAAAATTT 1367
consensus_12784#1 NCNCCTTGGAAAGGAAAAGGCTTTTNTC-------------------------------- 878
consensus_12784#3 ------------------------------------------------------------
consensus_12784#2 ------------------------------------------------------------
consensus_12784#0 TCCCCGATATTTATAAGATACTTTTGTGCACATGATGGAAGGACATGTATTTCCATGTTC 1427
consensus_12784#1 ------------------------------------------------------------
consensus_12784#3 ------------------------------------------------------------
consensus_12784#2 ------------------------------------------------------------
consensus_12784#0 TCATTAGTTTCGACTCCTATGTATTCAGATTATCAGATGTCAAGTCGCATAACATTCTCT 1487
consensus_12784#1 ------------------------------------------------------------
consensus_12784#3 ------------------------------------------------------------
consensus_12784#2 ------------------------------------------------------------
consensus_12784#0 ATTGAATGTATGCACAAAGTTCTAGATCCTAGGACAAATTAAACTGTATATGTAAACTAG 1547
consensus_12784#1 ------------------------------------------------------------
consensus_12784#3 ------------------------------------------------------------
consensus_12784#2 ------------------------------------------------------------
consensus_12784#0 AGTGGCAGCTGACCCTTCCTTGATTATGCCTTATATTGTTTCATCTTCATTTCACACAGC 1607
consensus_12784#1 ------------------------------------------------------------
consensus_12784#3 ------------------------------------------------------------
consensus_12784#2 ------------------------------------------------------------
consensus_12784#0 ACATACATTATGCAAACTGCATTGCATGGAATACATTTCACCTTCAATTCATAC 1661
consensus_12784#1 ------------------------------------------------------
consensus_12784#3 ------------------------------------------------------
consensus_12784#2 ------------------------------------------------------
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||