cluster # 1283

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Oryza sativa
cluster # 1283 cluster # 1283 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_1283#0 length = 620 sequences # 2

consensusID : consensus_1283#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 620
fasta sequence

                              [CTTCTTTGCCGGCCGGCCTCGATCCAGTCCTATAAGAAGCGAGGAGGACCCGAAGGCTATGCATTGCGCTCATCATCTCAAAAGCTCTTCTTCTTCTCCTTAGTTGATTTCATCTTCAGTTGCTTGAGCTTAATTACAGACTGAGAGAAGATGTCTTGCAGCTGTGGATCTAGCTGCAGCTGCGGCTCAAACTGCTCCTGCGGAAAGAAGTACCCTGACCTGGAAGAGAAGAGCAGCAGCACCAAGACCACCGTCGTGCCTGGGTGTGGCGCCGGAGAAGAAGGCGCAGCAGTTTGAGGCGGCCGCAGAGTCCGGCGAGACCGCCCATGGCTGCAGCTGCGGTTCCAGCTGCAGGTGCAACCCTTGCAACTGCTAAGATGCCTGCCTGCATCTACCATCTATCATGTGTGCGTGTGAATTGTGATGCAGAAAAATAAAGAAGCTTGGCCATTTGGGTTGGTGCTTGACCAATATATATGGGGTGTGTGTGTGTGTGTGATGGGTTAATCGATGTGCTATGTTATTGGTTTCACTATTCACGTACTATGCTTGTAATGGTGTATCCACAGATGAAGTGATGAATATATTACACTGGTTTGGCTAAAACCCCCGCAGACCGG]

[+] EMBL CF316370             [CTTCTTTGCCGGCCGGCCTCGATCCAGTCCTATAAGAAGCGAGGAGGACCCGAAGGCTATGCATTGCGCTCATCATCTCAAAAGCTCTTCTTCTTCTCCTTAGTTGATTTCATCTTCAGTTGCTTGAGCTTAATTACAGACTGAGAGAAGATGTCTTGCAGCTGTGGATCTAGCTGCAGCTGCGGCTCAAACTGCTCCTGCGGAAAGAAGTACCCTGACCTGGAAGAGAAGAGCAGCAGCACCAAGACCACCGTCGTGCCTGGG                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CB679466             [                                                                                        TCTCCTTCTCCTTAGTTGATTTCATCTTCAGTTGCTTGAGCTTAATTACAGACTGAGAGAAGATGTCTTGCAGCTGTGGATCTAGCTGCAGCTGCGGCTCAAACTGCTCCTGCGGAAAGAAGTACCCTGACCTGGAAGAGAAGAGCAGCAGCACCAAGGCCACCGTCGTG CTGGGTGTGGCGCCGGAGAAGAAGGCGCAGCAGTTTGAGGCGGCCGCAGAGTCCGGCGAGACCGCCCATGGCTGCAGCTGCGGTTCCAGCTGCAGGTGCAACCCTTGCAACTGCTAAGATGCCTGCCTGCATCTACCATCTATCATGTGTGCGTGTGAATTGTGATGCAGAAAAATAAAGAAGCTTGGCCATTTGGGTTGGTGCTTGACCAATATATATGGGGTGTGTGTGTGTGTGTGATGGGTTAATCGATGTGCTATGTTATTGGTTTCACTATTCACGTACTATGCTTGTAATGGTGTATCCACAGATGAAGTGATGAATATATTACACTGGTTTGGCTAAAACCCCCGCAGACCGG]




>consensus_1283#0
CTTCTTTGCCGGCCGGCCTCGATCCAGTCCTATAAGAAGCGAGGAGGACCCGAAGGCTAT
GCATTGCGCTCATCATCTCAAAAGCTCTTCTTCTTCTCCTTAGTTGATTTCATCTTCAGT
TGCTTGAGCTTAATTACAGACTGAGAGAAGATGTCTTGCAGCTGTGGATCTAGCTGCAGC
TGCGGCTCAAACTGCTCCTGCGGAAAGAAGTACCCTGACCTGGAAGAGAAGAGCAGCAGC
ACCAAGACCACCGTCGTGCCTGGGTGTGGCGCCGGAGAAGAAGGCGCAGCAGTTTGAGGC
GGCCGCAGAGTCCGGCGAGACCGCCCATGGCTGCAGCTGCGGTTCCAGCTGCAGGTGCAA
CCCTTGCAACTGCTAAGATGCCTGCCTGCATCTACCATCTATCATGTGTGCGTGTGAATT
GTGATGCAGAAAAATAAAGAAGCTTGGCCATTTGGGTTGGTGCTTGACCAATATATATGG
GGTGTGTGTGTGTGTGTGATGGGTTAATCGATGTGCTATGTTATTGGTTTCACTATTCAC
GTACTATGCTTGTAATGGTGTATCCACAGATGAAGTGATGAATATATTACACTGGTTTGG
CTAAAACCCCCGCAGACCGG

clustalw multiple alignements is not computed in this case