cluster # 12863

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Oryza sativa
cluster # 12863 cluster # 12863 Sequences # 11 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_12863#0 length = 1607 sequences # 8
consensus_12863#1 length = 693 sequences # 1

consensus_12863#2 length = 589 sequences # 1
consensus_12863#3 length = 114 sequences # 1

consensusID : consensus_12863#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1607
fasta sequence

                              [AAGAAAGCCCAGAACCCTAGCCCCTCCCGCCGCCGACGAGCAGCG-GCGCGCGAGAAGAACGGCCGGCGAGATGGGGCGGGACAAAGCGCGGAGGCTCTCCGGCAGCCGCCACTTCCGGCAGAGGGTGGTGCTGGCGACGCTGACGTCGACCGCCATCACCATCGACGACATCCGCTCCGGCGGCGCCGCGCCGGGCCTCCGCCCCCACGAGGTCTCCCTCCTCCACCTCCTCCACAAGATCTCCGACCACCACTCCCTCGACCTCAACGAGACAGGGACGAAGCTGAGGTACAAGCCGGGGGTGATCGTCGGCGGGAGGGACCTCGAGCACGACTGCGGGGTGCACCGGGGGATCGGCTACTTCCTTGAGCCGCTTATACTGCTTGGGCTCTTCGCCAGGGCGCCCATCTCCATTCGGCTCAAAGGAATTACTAATGATACAAAGGACCCTTCTGTGGATACTTTCCGAATGGTTACCTTGCATATGCTCAAACAATTCGGTGTTCCTCTGGAGGGATTGGAGTTAAAGATTGAAAGCCGGGGAGCTCCTCCTCTTGGTGGTGGTGAAGTGTTTCTTCGAGTTCCCAACATAAAGAGCACATTAAAGGCAGCTAACTGGGCTGATGAAGGTATGGTCAAGAGGATAAGAGGTGTATCATTTTCAACTAGAGTATCTCCACAAATTGAAAACCGCATCATTTATGCTGCACGTGGGATCTTCAATCGCTTTATTCCGGATGTTCATATATTCACTGATCATAGATCTGGTTCTGCTGGTGGCAGGTCAGCAGGCTATGGCGTATCTGTAGTTGCTGAGACTACCACAGGCTGCCTGCTCTCTGCAGATGCTACT-GTAAGTTATCCTAATGTTGATGAAATGAATGAGGAATCTGAGAATTTGGAGCTAACATCTCCAGAGGATCTTGGTGTTCAAGTTGCATCGATGTTGCTAGAAGAAGTTGCTCAAGGGGGAGTTGTTGACT-CAGCACATCAGGGCCTTCTGTTTATTCTATGTGCTCTAAGCCCACCTGATGTGTCAAAGGTTCGTGTTGGTCAGTTGACACCATACGCTATCGAAACACTTCGCAACATACGGGATTTCCTTGATGTCA-AGTTCATTATCAAGCCTGATCCAAATTCAAATACTGTTACATTGAAATGTGTTGGTGCTGGAGTGAAGAATCTTGCTCGGAAGACTTCGTGAACAACA-GGATGATGAATCCCATCAAAGGATGGATGAGTGCAGCAAGAACACTGGGTCTCCTGTAAGCTCTGTTTGTAACTGCAAAGCAACAAGTTGAGAGGTTTCA-TTTGCTGCCTGGGCTAAAATTTTGTCGAAGTGCGTGGTATATGTCATAGGTAGATTTGACCCAAGCATTTTATACCTGCTGGGATTTGTCTGATCATACCATCATGTCTTGTCACACTTTTGTATCTCCTTTATCTAATACGGCGATGCCATTGAGATTGGGCTTTAAGTTAATTGAAAAACTAGTATAATGGAGAAATATTGCTGTTTAGGCACATCGAAAATGTGTTGTTAGTATGCACATTGGATGTGATTATGCTGCAACATATATAAACCGTTTATATGAAACAAAAAGGAA]

[+] EMBL AK121918             [AAGAAAGCCCAGAACCCTAGCCCCTCCCGCCGCCGACGAGCAGCG GCGCGCGAGAAGAACGGCCGGCGAGATGGGGCGGGACAAAGCGCGGAGGCTCTCCGGCAGCCGCCACTTCCGGCAGAGGGTGGTGCTGGCGACGCTGACGTCGACCGCCATCACCATCGACGACATCCGCTCCGGCGGCGCCGCGCCGGGCCTCCGCCCCCACGAGGTCTCCCTCCTCCACCTCCTCCACAAGATCTCCGACCACCACTCCCTCGACCTCAACGAGACAGGGACGAAGCTGAGGTACAAGCCGGGGGTGATCGTCGGCGGGAGGGACCTCGAGCACGACTGCGGGGTGCACCGGGGGATCGGCTACTTCCTTGAGCCGCTTATACTGCTTGGGCTCTTCGCCAGGGCGCCCATCTCCATTCGGCTCAAAGGAGTTACTAATGATACAAAGGACCCTTCTGTGGATACTTTCCGAATGGTTACCTTGCATATGCTCAAACAATTCGGTGTTCCTCTGGAGGGATTGGAGTTAAAGATTGAAAGCCGGGGAGCTCCTCCTCTTGGTGGTGGTGAAGTGTTTCTTCGAGTTCCCAACATAAAGAGCACATTAAAGGCAGCTAACTGGGCTGATGAAGGTATGGTCAAGAGGATAAGAGGTGTATCATTTTCAACTAGAGTATCTCCACAAATTGAAAACCGCATCATTTATGCTGCACGTGGGATCTTCAATCGCTTTATTCCGGATGTTCATATATTCACTGATCATAGATCTGGTTCTGCTGGTGGCAGGTCAGCAGGCTATGGCGTATCTGTAGTTGCTGAGACTACCACAGGCTGCCTGCTCTCTGCAGATGCTACT GTAAGTTATCCTAATGTTGATGAAATGAATGAGGAATCTGAGAATTTGGAGCTAACATCTCCAGAGGATCTTGGTGTTCAAGTTGCATCGATGTTGCTAGAAGAAGTTGCTCAAGGGGGAGTTGTTGACT CAGCACATCAGGGCCTTCTGTTTATTCTATGTGCTCTAAGCCCACCTGATGTGTCAAAGGTTCGTGTTGGTCAGTTGACACCATACGCTATCGAAACACTTCGCAACATACGGGATTTCCTTGATGTCA AGTTCATTATCAAGCCTGATCCAAATTCAAATACTGTTACATTGAAATGTGTTGGTGCTGGAGTGAAGAATCTTGCTCGGAAGACTTCGTGAACAACA GGATGATGAATCCCATCAAAGGATGGATGAGTGCAGCAAGAACACTGGGTCTCCTGTAAGCTCTGTTTGTAACTGCAAAGCAACAAGTTGAGAGGTTTCA TTTGCTGCCTGGGCTAAAATTTTGTCGAAGTGCGTGGTATATGTCATAGGTAGATTTGACCCAAGCATTTTATACCTGCTGGGATTTGTCTGATCATACCATCATGTCTTGTCACACTTTTGTATCTCCTTTATCTAATACGGCGATGCCATTGAGATTGGGCTTT                                                                                                                                   ]
[+] EMBL CB670494             [                                     GAGCAGCGCGCGCGCGAGAAGAACGGCCGGCGAGATGGGGCGGGACAAAGCGCGGAGGCTCTCCGGCAGCCGCCACTTCCGGCAGAGGGTGGTGCTGGCGACGCTGACGTCGACCGCCATCACCATCGACGACATCCGCTCCGGCGGCGCCGCGCCGGGCCTCCGCCCCCACGAGGTCTCCCTCCTCCACCTCCTCCACAAGATCTCCGACCACCACTCCCTCGACCTCAACGAGACAGGGACGAAGCTGAGGTACAAGCCGGGGGTGATCGTCGGCGGGAGGGACCTCGAGCACGACTGCGGGGTGCACCGGGGGATCGGCTACTTCCTTGAGCCGCTTATACTGCTTGGGCTCTTCGCCAGGGCGCCCATCTCCATTCGGCTCAAAGGAATTACTAATGATACAAAGGACCCTTCTGTGGATACTTTCCGAATGGTTACCTTGCATATGCTCAAACAATTCGGTGTTCCTCTGGAGGGATTGGAGTTAAAGATTGAAAGCCGGGGAGCTCCTCCTCTTGGTGGTGGTGAAGTGTTTCTTCGAGTTCCCAACATAAAGAGCACATTAAAGGCAGCTAACTGGGCTGATGAAGGTATGGTCAAGAGGATAAGAGGTGTATCATTTTCAACTAGAGTATCTCCACAAATTGAAAACCGCATCATTTATGCTGCACGTGGGATCTTCAATCGCTTTATTCCGGATGTTCATATATTCACTGATCATAGATCTGGTTCTGCTGGTGGCAGGTCAGCAGGCTATGGCGTATCTGTAGTTGCTGAGACTACCACAGGCTGCCTGCTCTCTGCAGATGCTACTGGTAAG TATC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CB646466             [                                                     AGAAGAACGGCCGGCGAGATGGGGCGGGACAAAGCGCGGAGGCTCTCCGGCAGCCGCCACTTCCGGCAGAGGGTGGTGCTGGCGACGCTGACGTCGACCGCCATCACCATCGACGACATCCGCTCCGGCGGCGCCGCGCCGGGCCTCCGCCCCCACGAGGTCTCCCTCCTCCACCTCCTCCACAAGATCTCCGACCACCACTCCCTCGACCTCAACGAGACAGGGACGAAGCTGAGGTACAAGCCGGGGGTGATCGTCGGCGGGAGGGACCTCGAGCACGACTGCGGGGTGCACCGGGGGATCGGCTACTTCCTTGAGCCGCTTATACTGCTTGGGCTCTTCGCCAGGGCGCCCATCTCCATTCGGCTCAAAGGAATTACTAATGATACAAAGGACCCTTCTGTGGATACTTTCCGAATGGTTACCTTGCATATGCTCAAACAATTCGGTGTTCCTCTGGAGGGATTGGAGTTAAAGATTGAAAGCCGGGGAGCTCCTCCTCTTGGTGGTGGTGAAGTGTTTCTTCGAGTTCCCAACATAAAGAGCACATTAAAGGCAGCTAACTGGGCTGATGAAGGTATGGTCAAGAGGATAAGAGGTGTATCATTTTCAACTAGAGTATCTCCACAAATTGAAAACCGCATCATTTATGCTGCACGTGGGATCTTCAATCGCTTTATTCCGGATGTTCATAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CB647020             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 TGAAGGTATGGTCAAGAGGATAAGAGGTGTATCATTTTCAACTAGAGTATCTCCACAAATTGAAAACCGCATCATTTATGCTGCACGTGGGATCTTCAATCGCTTTATTCCGGATGTTCATATATTCACTGATCATAGATCTGGTTCTGCTGGTGGCAGGTCAGCAGGCTATGGCGTATCTGTAGTTGCTGAGACTACCACAGGCTGCCTGCTCTCTGCAGATGCTACT GTAAGTTATCCTAATGTTGATGAAATGAATGAGGAATCTGAGAATTTGGAGCTAACATCTCCAGAGGATCTTGGTGTTCAAGTTGCATCGATGTTGCTAGAAGAAGTTGCTCAAGGGGGAGTTGTTGACT CAGCACATCAGGGCCTTCTGTTTATTCTATGTGCTCTAAGCCCACCTGATGTGTCAAAGGTTCGTGTTGGTCAGTTGACACCATACGCTATCGAAACACTTCGCAACATACGGGATTTCCTTGATGTCA AGTTCATTATCAAGCCTGATCCAAATTCAAATACTGTTACATTGAAATGTGTTGGTGCTGGAGTGAAGAATCTTGCTCGGAAGACTTCGTGAACAACA GGATGATGAATCCCATCAAAGGATGGATGAGTGCAGCAAGAACACTGGGTCTCCTGTAAGCTCTGTTTGTAACTGCAAAGCAACAAGTTGAGAGGTTTCA TTTGC                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CB670495             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               TGCTGCACGTGGGATCTTCAATCGCTTTATTCCGGATGTTCATATATTCACTGATCATAGATCTGGTTCTGCTGGTGGCAGGTCAGCAGGCTATGGCGTATCTGTAGTTGCTGAGACTACCACAGGCTGCCTGCTCTCTGCAGATGCTACT GTAAGTTATCCTAATGTTGATGAAATGAATGAGGAATCTGAGAATTTGGAGCTAACATCTCCAGAGGATCTTGGTGTTCAAGTTGCATCGATGTTGCTAGAAGAAGTTGCTCAAGGGGGAGTTGTTGACT CAGCACATCAGGGCCTTCTGTTTATTCTATGTGCTCTAAGCCCACCTGATGTGTCAAAGGTTCGTGTTGGTCAGTTGACACCATACGCTATCGAAACACTTCGCAACATACGGGATTTCCTTGATGTCA AGTTCATTATCAAGCCTGATCCAAATTCAAATACTGTTACATTGAAATGTGTTGGTGCTGGAGTGAAGAATCTTGCTCGGAAGACTTCGTGAACAACA GGATGATGAATCCCATCAAAGGATGGATGAGTGCAGCAAGAACACTGGGTCTCCTGTAAGCTCTGTTTGTAACTGCAAAGCAACAAGTTGAGAGGTTTCA TTTGCTGCCTGGGCTAAAATTTTGTCGAAGTGCGTGGTATATGTCATAGGTAGATTTGACCCAAGCATTTTATACCTGCTGGGATTTGTCTGATCATACCATCATGTCTTGTCACACTTTTGTATCTCCTTTATATAATACGGCGATGCCATTGAGATTGGGCTTTAAG                                                                                                                                ]
[-] EMBL CB646467             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               TGCTGCACGGGGGATCTTCAATCGCTTTATTCCGGATGTTCATATATTCACTGATCATAGATCTGGTTCTGCTGGTGGCAGGTCAGCAGGCTATGGCGTATCTGTAGTTGCTGAGACTACCACAGGCTGCCTGCTCTCTGCAGATGCTACT GTAAGTTATCCTAATGTTGATGAAATGAATGAGGAATCTGAGAATTTGGAGCTAACATCTCCAGAGGATCTTGGTGTTCAAGTTGCATCGATGTTGCTAGAAGAAGTTGCTCAAGGGGGAGTTGTTGACT CAGCACATCAGGGCCTTCTGTTTATTCTATGTGCTCTAAGCCCACCTGATGTGTCAAAGGTTCGTGTTGGTCAGTTGACACCATACGCTATCGAAACACTTCGCAACATACGGGATTTCCTTGATGTCA AGTTCATTATCAAGCCTGATCCAAATTCAAATACTGTTACATTGAAATGTGTTGGTGCTGGAGTGAAGAATCTTGCTCGGAAGACTTCGTGAACAACA GGATGATGAATCCCATCAAAGGATGGATGAGTGCAGCAAGAACACTGGGTCTCCTGTAAGCTCTGTTTGTAACTGCAAAGCAACAAGTTGAGAGGTTTCA TTTGCTGCCTGGGCTAAAATTTTGTCGAAGTGCGTGGTATATGTCATAGGTAGATTTGACCCAAGCATTTTATACCTGCTGGGATTTGTCTGATCATACCATCATGTCTTGTCACACTTTTGTATCTCCTTTATCTAAGGGGGGGATGCCATTGAGATTGGGCTTTAAGTTAAAAAAAAAg                                                                                                                    ]
[-] EMBL CB665124             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             CTGGTTCTGCTGGTGGCAGGTCAGCAGGCTATGGCGTATCTGTAGTTGCTGAGACTACCACAGGCTGCCTGCTCTCTGCAGATGCTACT GTAAGTTATCCTAATGTTGATGAAATGAATGAGGAATCTGAGAATTTGGAGCTAACATCTCCAGAGGATCTTGGTGTTCAAGTTGCATCGATGTTGCTAGAAGAAGTTGCTCAAGGGGGAGTTGTTGACT CAGCACATCAGGGCCTTCTGTTTATTCTATGTGCTCTAAGCCCACCTGATGTGTCAAAGGTTCGTGTTGGTCAGTTGACACCATACGCTATCGAAACACTTCGCAACATACGGGATTTCCTTGATGTCA AGTTCATTATCAAGCCTGATCCAAATTCAAATACTGTTACATTGAAATGTGTTGGTGCTGGAGTGAAGAATCTTGCTCGGAAGACTTCGTGAACAACA GGATGATGAATCCCATCAAAGGATGGATGAGTGCAGCAAGAACACTGGGTCTCCTGTAAGCTCTGTTTGTAACTGCAAAGCAACAAGTTGAGAGGTTTCA TTTGCTGCCTGGGCTAAAATTTTGTCGAAGTGCGTGGTATATGTCATAGGTAGATTTGACCCAAGCATTTTATACCTGCTGGGATTTGTCTGATCATACCATCATGTCTTGTCACACTTTTGTATCTCCTTTATCTAATACGGCGATGCCATTGAGATTGGGCTTTAAGTTAATTGAAATACTAGTATAATGGAGAAATATTGCTGTTTAGGCACATCGAAAATGTGTTGTTAGTATGCACATTGGATGTGATTATGCTGCAACATATATAAACCGTTTATATGAAACAAAAAGGAA]
[+] EMBL BI812475             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    taACTCCAGCACATCAGGCCCTTCTGTTTATTCTATGTGCTCTAAGCCCACCTGATGTGTCAAAGGTTCGT TTGGTCCGTTGACACCATACGCTATCGAAACACTTCGCAACATACGGGATTTCCTTGATGTCACAGTTCATTATCAAGCCTGATCCCAATTCAAATACTGTTACCTTGAAATGTGTTGGTGCTGGAGTGAAGAATCTTGCTCGGAAGACTTCGTGAACAACACGGATGATGAATCCCCTCCAAGGATGGATGAGT CAGCCAGAACCCTGGGTCTCCTGTAAGCTCTGTTTGTAACTGCCAAGCCACCAGTTGAGAGGTTTCACTTTGCTGCCTGGGCTAAAATTTTGTCGAAGTGCGTGGTATATGTCCTAGGTAGATTTGACCCCAGCCTTTTATACCTGCTGGGATTTGTCTGATCATACCATCATGTCTTGTCACACTTTTGTATCTCCTTTATCTAATACGGCGATGCCCTTGAGATTGGGCTTTAAGTTAATTGAAAAAaaaaa                                                                                                               ]




>consensus_12863#0
AAGAAAGCCCAGAACCCTAGCCCCTCCCGCCGCCGACGAGCAGCGGCGCGCGAGAAGAAC
GGCCGGCGAGATGGGGCGGGACAAAGCGCGGAGGCTCTCCGGCAGCCGCCACTTCCGGCA
GAGGGTGGTGCTGGCGACGCTGACGTCGACCGCCATCACCATCGACGACATCCGCTCCGG
CGGCGCCGCGCCGGGCCTCCGCCCCCACGAGGTCTCCCTCCTCCACCTCCTCCACAAGAT
CTCCGACCACCACTCCCTCGACCTCAACGAGACAGGGACGAAGCTGAGGTACAAGCCGGG
GGTGATCGTCGGCGGGAGGGACCTCGAGCACGACTGCGGGGTGCACCGGGGGATCGGCTA
CTTCCTTGAGCCGCTTATACTGCTTGGGCTCTTCGCCAGGGCGCCCATCTCCATTCGGCT
CAAAGGAATTACTAATGATACAAAGGACCCTTCTGTGGATACTTTCCGAATGGTTACCTT
GCATATGCTCAAACAATTCGGTGTTCCTCTGGAGGGATTGGAGTTAAAGATTGAAAGCCG
GGGAGCTCCTCCTCTTGGTGGTGGTGAAGTGTTTCTTCGAGTTCCCAACATAAAGAGCAC
ATTAAAGGCAGCTAACTGGGCTGATGAAGGTATGGTCAAGAGGATAAGAGGTGTATCATT
TTCAACTAGAGTATCTCCACAAATTGAAAACCGCATCATTTATGCTGCACGTGGGATCTT
CAATCGCTTTATTCCGGATGTTCATATATTCACTGATCATAGATCTGGTTCTGCTGGTGG
CAGGTCAGCAGGCTATGGCGTATCTGTAGTTGCTGAGACTACCACAGGCTGCCTGCTCTC
TGCAGATGCTACTGTAAGTTATCCTAATGTTGATGAAATGAATGAGGAATCTGAGAATTT
GGAGCTAACATCTCCAGAGGATCTTGGTGTTCAAGTTGCATCGATGTTGCTAGAAGAAGT
TGCTCAAGGGGGAGTTGTTGACTCAGCACATCAGGGCCTTCTGTTTATTCTATGTGCTCT
AAGCCCACCTGATGTGTCAAAGGTTCGTGTTGGTCAGTTGACACCATACGCTATCGAAAC
ACTTCGCAACATACGGGATTTCCTTGATGTCAAGTTCATTATCAAGCCTGATCCAAATTC
AAATACTGTTACATTGAAATGTGTTGGTGCTGGAGTGAAGAATCTTGCTCGGAAGACTTC
GTGAACAACAGGATGATGAATCCCATCAAAGGATGGATGAGTGCAGCAAGAACACTGGGT
CTCCTGTAAGCTCTGTTTGTAACTGCAAAGCAACAAGTTGAGAGGTTTCATTTGCTGCCT
GGGCTAAAATTTTGTCGAAGTGCGTGGTATATGTCATAGGTAGATTTGACCCAAGCATTT
TATACCTGCTGGGATTTGTCTGATCATACCATCATGTCTTGTCACACTTTTGTATCTCCT
TTATCTAATACGGCGATGCCATTGAGATTGGGCTTTAAGTTAATTGAAAAACTAGTATAA
TGGAGAAATATTGCTGTTTAGGCACATCGAAAATGTGTTGTTAGTATGCACATTGGATGT
GATTATGCTGCAACATATATAAACCGTTTATATGAAACAAAAAGGAA

consensusID : consensus_12863#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 693
fasta sequence

                              [TACCACAGGCTGCCTGCTCTCTGCAGATGGTACTGTAAGTTATCCTAATGTTGCCGAAATGAATGAGGAATCTGAGAATTTGGAGCTAACATCTCCAGAGGATCTTGGTGTTCAAGTTGCATCGATGTTGCTAGAAGAAGTTGCTCAAGGGGGAGTTGTTGACTCAGCACATCAGGGCCTTCTGTTTATTCTATGTGCTCTAAGCCCCCCTGATGTGTCAAAGGTTCGTGTTGGTCAGTTGACCCCATACGCTATTGAAACACTTCGCAACATACGGGATTTCCTTGATGTCAAGTTCATTATCAAGCCTGATCCAAATTCAAATACTGTTACATTGAAATGTGTTGGTGCTGGAGTGAAAAATCTTGCTCGGAAGACTTCGTGAACAACAGGATGATGAATCCCCTCAAAGGATGGATGAGTGCAGCAAGAACCCTGGGTTTCCTGTAAGCTCTGTTTGTAACTGCAAAGCAACAAGTTGAGAGGTTTCCTTTGCTGCCTGGGCTAAAATTTTGTCGAAGTGCGTGGTATATGTCATAGGTAGATTTGACCCCAGCCTTTTATACCTGCTGGGATTTGTCTGATCATACCATCATGTCTTGTCCCCCTTTTGTATCTCCTTTATTTAATACGGCGATGCCATTGAGATTGGGCTTTAAGTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAT]

[-] EMBL CA762854             [TACCACAGGCTGCCTGCTCTCTGCAGATGGTACTGTAAGTTATCCTAATGTTGCCGAAATGAATGAGGAATCTGAGAATTTGGAGCTAACATCTCCAGAGGATCTTGGTGTTCAAGTTGCATCGATGTTGCTAGAAGAAGTTGCTCAAGGGGGAGTTGTTGACTCAGCACATCAGGGCCTTCTGTTTATTCTATGTGCTCTAAGCCCCCCTGATGTGTCAAAGGTTCGTGTTGGTCAGTTGACCCCATACGCTATTGAAACACTTCGCAACATACGGGATTTCCTTGATGTCAAGTTCATTATCAAGCCTGATCCAAATTCAAATACTGTTACATTGAAATGTGTTGGTGCTGGAGTGAAAAATCTTGCTCGGAAGACTTCGTGAACAACAGGATGATGAATCCCCTCAAAGGATGGATGAGTGCAGCAAGAACCCTGGGTTTCCTGTAAGCTCTGTTTGTAACTGCAAAGCAACAAGTTGAGAGGTTTCCTTTGCTGCCTGGGCTAAAATTTTGTCGAAGTGCGTGGTATATGTCATAGGTAGATTTGACCCCAGCCTTTTATACCTGCTGGGATTTGTCTGATCATACCATCATGTCTTGTCCCCCTTTTGTATCTCCTTTATTTAATACGGCGATGCCATTGAGATTGGGCTTTAAGTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAT]




>consensus_12863#1
TACCACAGGCTGCCTGCTCTCTGCAGATGGTACTGTAAGTTATCCTAATGTTGCCGAAAT
GAATGAGGAATCTGAGAATTTGGAGCTAACATCTCCAGAGGATCTTGGTGTTCAAGTTGC
ATCGATGTTGCTAGAAGAAGTTGCTCAAGGGGGAGTTGTTGACTCAGCACATCAGGGCCT
TCTGTTTATTCTATGTGCTCTAAGCCCCCCTGATGTGTCAAAGGTTCGTGTTGGTCAGTT
GACCCCATACGCTATTGAAACACTTCGCAACATACGGGATTTCCTTGATGTCAAGTTCAT
TATCAAGCCTGATCCAAATTCAAATACTGTTACATTGAAATGTGTTGGTGCTGGAGTGAA
AAATCTTGCTCGGAAGACTTCGTGAACAACAGGATGATGAATCCCCTCAAAGGATGGATG
AGTGCAGCAAGAACCCTGGGTTTCCTGTAAGCTCTGTTTGTAACTGCAAAGCAACAAGTT
GAGAGGTTTCCTTTGCTGCCTGGGCTAAAATTTTGTCGAAGTGCGTGGTATATGTCATAG
GTAGATTTGACCCCAGCCTTTTATACCTGCTGGGATTTGTCTGATCATACCATCATGTCT
TGTCCCCCTTTTGTATCTCCTTTATTTAATACGGCGATGCCATTGAGATTGGGCTTTAAG
TTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAT

consensusID : consensus_12863#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 589
fasta sequence

                              [TTTGAGCTACATCTCCAAGATCTTGGGTTCAAATTGCATCGATGTGGCTAGAAGAAGTGGCTCAAGGGGGAGTTGTTGACTCAGCACATCAGGCCTTCTGTTATTCTATGTGCTGCTAAGCCCACCTGATGTGTCAAAGGTTCGTGTTGGTCACATTTGACACCATACGCTATCGAAACACTTCGCACATAGCGGGATTTCCTTGATGTCAAGTTCATTATCAAGCCTGATCCCAATTGCCGAATACTGTTACCTTGAAATGTGTTGGTGGCTGGAGTGAAGAATCTTGCTCGGAAGACTTCGTGAACCACAGGATGATGAATCCCATGCCAAGGATGGATGAGTGCAGCCAGAACCCTGGGTCTCCTGTGAAGCTGCTGGTTTGTAGACGCCAGAGCCACCAGTTGAGAGGTTTCATTTGCGGCCTGGGCTGTAATTTTGTCGAAGTGCGTGGTATATGTCATAGGTAGATGTGACCGCGAGCGTGGTATAGCCTGCTGGGATTTGTCTGTCAGCCCTCGTGTCGTGTGCTCCTTGTGGAGTCTCCGGTATCGTGATGGCGGCGAGGGCCCTGGGGGGTTGGGGCTGG]

[+] EMBL BI807761             [TTTGAGCTACATCTCCAAGATCTTGGGTTCAAATTGCATCGATGTGGCTAGAAGAAGTGGCTCAAGGGGGAGTTGTTGACTCAGCACATCAGGCCTTCTGTTATTCTATGTGCTGCTAAGCCCACCTGATGTGTCAAAGGTTCGTGTTGGTCACATTTGACACCATACGCTATCGAAACACTTCGCACATAGCGGGATTTCCTTGATGTCAAGTTCATTATCAAGCCTGATCCCAATTGCCGAATACTGTTACCTTGAAATGTGTTGGTGGCTGGAGTGAAGAATCTTGCTCGGAAGACTTCGTGAACCACAGGATGATGAATCCCATGCCAAGGATGGATGAGTGCAGCCAGAACCCTGGGTCTCCTGTGAAGCTGCTGGTTTGTAGACGCCAGAGCCACCAGTTGAGAGGTTTCATTTGCGGCCTGGGCTGTAATTTTGTCGAAGTGCGTGGTATATGTCATAGGTAGATGTGACCGCGAGCGTGGTATAGCCTGCTGGGATTTGTCTGTCAGCCCTCGTGTCGTGTGCTCCTTGTGGAGTCTCCGGTATCGTGATGGCGGCGAGGGCCCTGGGGGGTTGGGGCTGG]




>consensus_12863#2
TTTGAGCTACATCTCCAAGATCTTGGGTTCAAATTGCATCGATGTGGCTAGAAGAAGTGG
CTCAAGGGGGAGTTGTTGACTCAGCACATCAGGCCTTCTGTTATTCTATGTGCTGCTAAG
CCCACCTGATGTGTCAAAGGTTCGTGTTGGTCACATTTGACACCATACGCTATCGAAACA
CTTCGCACATAGCGGGATTTCCTTGATGTCAAGTTCATTATCAAGCCTGATCCCAATTGC
CGAATACTGTTACCTTGAAATGTGTTGGTGGCTGGAGTGAAGAATCTTGCTCGGAAGACT
TCGTGAACCACAGGATGATGAATCCCATGCCAAGGATGGATGAGTGCAGCCAGAACCCTG
GGTCTCCTGTGAAGCTGCTGGTTTGTAGACGCCAGAGCCACCAGTTGAGAGGTTTCATTT
GCGGCCTGGGCTGTAATTTTGTCGAAGTGCGTGGTATATGTCATAGGTAGATGTGACCGC
GAGCGTGGTATAGCCTGCTGGGATTTGTCTGTCAGCCCTCGTGTCGTGTGCTCCTTGTGG
AGTCTCCGGTATCGTGATGGCGGCGAGGGCCCTGGGGGGTTGGGGCTGG

consensusID : consensus_12863#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 114
fasta sequence

                              [GATGCCATTGAGATTGGGCTTTAAGTTAATTGAAATACTAGTATAATGGAGAAATATTGCTGTTTAGGCNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL CA754395             [GATGCCATTGAGATTGGGCTTTAAGTTAATTGAAATACTAGTATAATGGAGAAATATTGCTGTTTAGGCNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]




>consensus_12863#3
GATGCCATTGAGATTGGGCTTTAAGTTAATTGAAATACTAGTATAATGGAGAAATATTGC
TGTTTAGGCNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12863#1      ------------------------------------------------------------
consensus_12863#2      ------------------------------------------------------------
consensus_12863#0      AAGAAAGCCCAGAACCCTAGCCCCTCCCGCCGCCGACGAGCAGCGGCGCGCGAGAAGAAC 60
consensus_12863#3      ------------------------------------------------------------
                                                                                   

consensus_12863#1      ------------------------------------------------------------
consensus_12863#2      ------------------------------------------------------------
consensus_12863#0      GGCCGGCGAGATGGGGCGGGACAAAGCGCGGAGGCTCTCCGGCAGCCGCCACTTCCGGCA 120
consensus_12863#3      ------------------------------------------------------------
                                                                                   

consensus_12863#1      ------------------------------------------------------------
consensus_12863#2      ------------------------------------------------------------
consensus_12863#0      GAGGGTGGTGCTGGCGACGCTGACGTCGACCGCCATCACCATCGACGACATCCGCTCCGG 180
consensus_12863#3      ------------------------------------------------------------
                                                                                   

consensus_12863#1      ------------------------------------------------------------
consensus_12863#2      ------------------------------------------------------------
consensus_12863#0      CGGCGCCGCGCCGGGCCTCCGCCCCCACGAGGTCTCCCTCCTCCACCTCCTCCACAAGAT 240
consensus_12863#3      ------------------------------------------------------------
                                                                                   

consensus_12863#1      ------------------------------------------------------------
consensus_12863#2      ------------------------------------------------------------
consensus_12863#0      CTCCGACCACCACTCCCTCGACCTCAACGAGACAGGGACGAAGCTGAGGTACAAGCCGGG 300
consensus_12863#3      ------------------------------------------------------------
                                                                                   

consensus_12863#1      ------------------------------------------------------------
consensus_12863#2      ------------------------------------------------------------
consensus_12863#0      GGTGATCGTCGGCGGGAGGGACCTCGAGCACGACTGCGGGGTGCACCGGGGGATCGGCTA 360
consensus_12863#3      ------------------------------------------------------------
                                                                                   

consensus_12863#1      ------------------------------------------------------------
consensus_12863#2      ------------------------------------------------------------
consensus_12863#0      CTTCCTTGAGCCGCTTATACTGCTTGGGCTCTTCGCCAGGGCGCCCATCTCCATTCGGCT 420
consensus_12863#3      ------------------------------------------------------------
                                                                                   

consensus_12863#1      ------------------------------------------------------------
consensus_12863#2      ------------------------------------------------------------
consensus_12863#0      CAAAGGAATTACTAATGATACAAAGGACCCTTCTGTGGATACTTTCCGAATGGTTACCTT 480
consensus_12863#3      ------------------------------------------------------------
                                                                                   

consensus_12863#1      ------------------------------------------------------------
consensus_12863#2      ------------------------------------------------------------
consensus_12863#0      GCATATGCTCAAACAATTCGGTGTTCCTCTGGAGGGATTGGAGTTAAAGATTGAAAGCCG 540
consensus_12863#3      ------------------------------------------------------------
                                                                                   

consensus_12863#1      ------------------------------------------------------------
consensus_12863#2      ------------------------------------------------------------
consensus_12863#0      GGGAGCTCCTCCTCTTGGTGGTGGTGAAGTGTTTCTTCGAGTTCCCAACATAAAGAGCAC 600
consensus_12863#3      ------------------------------------------------------------
                                                                                   

consensus_12863#1      ------------------------------------------------------------
consensus_12863#2      ------------------------------------------------------------
consensus_12863#0      ATTAAAGGCAGCTAACTGGGCTGATGAAGGTATGGTCAAGAGGATAAGAGGTGTATCATT 660
consensus_12863#3      ------------------------------------------------------------
                                                                                   

consensus_12863#1      ------------------------------------------------------------
consensus_12863#2      ------------------------------------------------------------
consensus_12863#0      TTCAACTAGAGTATCTCCACAAATTGAAAACCGCATCATTTATGCTGCACGTGGGATCTT 720
consensus_12863#3      ------------------------------------------------------------
                                                                                   

consensus_12863#1      ------------------------------------------------------------
consensus_12863#2      ------------------------------------------------------------
consensus_12863#0      CAATCGCTTTATTCCGGATGTTCATATATTCACTGATCATAGATCTGGTTCTGCTGGTGG 780
consensus_12863#3      ------------------------------------------------------------
                                                                                   

consensus_12863#1      ---------------------------------------TACCACAGGCTGCCTGCTCTC 21
consensus_12863#2      ------------------------------------------------------------
consensus_12863#0      CAGGTCAGCAGGCTATGGCGTATCTGTAGTTGCTGAGACTACCACAGGCTGCCTGCTCTC 840
consensus_12863#3      ------------------------------------------------------------
                                                                                   

consensus_12863#1      TGCAGATGGTACTGTAAGTTATCCTAATGTTGCCGAAATGAATGAGGAATCTGAGAATTT 81
consensus_12863#2      ----------------------------------------------------------TT 2
consensus_12863#0      TGCAGATGCTACTGTAAGTTATCCTAATGTTGATGAAATGAATGAGGAATCTGAGAATTT 900
consensus_12863#3      ------------------------------------------------------------
                                                                                   

consensus_12863#1      GGAGCTAACATCTCCAGAGGATCTTGGTGTTCAAGTTGCATCGATGTTGCTAGAAGAAGT 141
consensus_12863#2      TGAGCTA-CATCTCCAA--GATCTTGG-GTTCAAATTGCATCGATGTGGCTAGAAGAAGT 58
consensus_12863#0      GGAGCTAACATCTCCAGAGGATCTTGGTGTTCAAGTTGCATCGATGTTGCTAGAAGAAGT 960
consensus_12863#3      ------------------------------------------------------------
                                                                                   

consensus_12863#1      TGCTCAAGGGGGAGTTGTTGACTCAGCACATCAGGGCCTTCTGTTTATTCTATGTGCT-C 200
consensus_12863#2      GGCTCAAGGGGGAGTTGTTGACTCAGCACATCAGG-CCTTCTGTT-ATTCTATGTGCTGC 116
consensus_12863#0      TGCTCAAGGGGGAGTTGTTGACTCAGCACATCAGGGCCTTCTGTTTATTCTATGTGCT-C 1019
consensus_12863#3      ------------------------------------------------------------
                                                                                   

consensus_12863#1      TAAGCCCCCCTGATGTGTCAAAGGTTCGTGTTGGTCAG--TTGACCCCATACGCTATTGA 258
consensus_12863#2      TAAGCCCACCTGATGTGTCAAAGGTTCGTGTTGGTCACATTTGACACCATACGCTATCGA 176
consensus_12863#0      TAAGCCCACCTGATGTGTCAAAGGTTCGTGTTGGTCAG--TTGACACCATACGCTATCGA 1077
consensus_12863#3      ------------------------------------------------------------
                                                                                   

consensus_12863#1      AACACTTCGCAACATACGGGATTTCCTTGATGTCAAGTTCATTATCAAGCCTGATCCAAA 318
consensus_12863#2      AACACTTCGCACATAGCGGGATTTCCTTGATGTCAAGTTCATTATCAAGCCTGATCCCAA 236
consensus_12863#0      AACACTTCGCAACATACGGGATTTCCTTGATGTCAAGTTCATTATCAAGCCTGATCCAAA 1137
consensus_12863#3      ----------------------------GATGCCA---TTGAGATTGGGCTTTAAGTTAA 29
                                                   **** **   *    **   ** * *    **

consensus_12863#1      TT--CAAATACTGTTACATTGAA-ATGTGTTGGTG-CTGGAGTGAAAAATCTTGCTCGGA 374
consensus_12863#2      TTGCCGAATACTGTTACCTTGAA-ATGTGTTGGTGGCTGGAGTGAAGAATCTTGCTCGGA 295
consensus_12863#0      TT--CAAATACTGTTACATTGAA-ATGTGTTGGTG-CTGGAGTGAAGAATCTTGCTCGGA 1193
consensus_12863#3      TTG--AAATACTAGTATAATGGAGAAATATTGCTGTTTAGGCNAAAAAAAAAAAAAAAAA 87
                       **    ******  **   ** * *  * *** **  * *    ** **          *

consensus_12863#1      AGACTTCGTGAACAACAGGATGATGAATCCCCT-CAAAGGATGGATGAGTGCAGCAAGAA 433
consensus_12863#2      AGACTTCGTGAACCACAGGATGATGAATCCCATGCCAAGGATGGATGAGTGCAGCCAGAA 355
consensus_12863#0      AGACTTCGTGAACAACAGGATGATGAATCCCAT-CAAAGGATGGATGAGTGCAGCAAGAA 1252
consensus_12863#3      AAAAAAAAAAAAAAAAAAAAAAAAAAA--------------------------------- 114
                       * *       **  * *  *  *  **                                 

consensus_12863#1      CCCTGGGTTTCCTGT-AAGCTCT--GTTTGTAACTGC-AAAGCAACAAGTTGAGAGGTTT 489
consensus_12863#2      CCCTGGGTCTCCTGTGAAGCTGCTGGTTTGTAGACGCCAGAGCCACCAGTTGAGAGGTTT 415
consensus_12863#0      CACTGGGTCTCCTGT-AAGCTCT--GTTTGTAACTGC-AAAGCAACAAGTTGAGAGGTTT 1308
consensus_12863#3      ------------------------------------------------------------
                                                                                   

consensus_12863#1      CCTTTGCTGCCTGGGCTAAAATTTTGTCGAAGTGCGTGGTATATGTCATAGGTAGATTTG 549
consensus_12863#2      CATTTGCGGCCTGGGCTGTAATTTTGTCGAAGTGCGTGGTATATGTCATAGGTAGATGTG 475
consensus_12863#0      CATTTGCTGCCTGGGCTAAAATTTTGTCGAAGTGCGTGGTATATGTCATAGGTAGATTTG 1368
consensus_12863#3      ------------------------------------------------------------
                                                                                   

consensus_12863#1      ACCCC-AGCCTTTTATA-CCTGCTGGGATTTGTCTGATCATACCATCATGTCTTGTCCCC 607
consensus_12863#2      ACCGCGAGCGTGGTATAGCCTGCTGGGATTTGTCTG-TCA-GCCCTCGTGTCGTGTGCTC 533
consensus_12863#0      ACC-CAAGCATTTTATA-CCTGCTGGGATTTGTCTGATCATACCATCATGTCTTGTCACA 1426
consensus_12863#3      ------------------------------------------------------------
                                                                                   

consensus_12863#1      CTTTTGTA-TCTCCTTTATT-TAATA-CGGCGATGCCATTGAGATTGGGCTTTAAGTTAA 664
consensus_12863#2      CTTGTGGAGTCTCCGGTATCGTGATGGCGGCGAGGGCCCTGGG----GGGTTGGGGCTGG 589
consensus_12863#0      CTTTTGTA-TCTCCTTTATC-TAATA-CGGCGATGCCATTGAGATTGGGCTTTAAGTTAA 1483
consensus_12863#3      ------------------------------------------------------------
                                                                                   

consensus_12863#1      AAAAAAAAAAAAAAAAAAAAAAAAAAAAT------------------------------- 693
consensus_12863#2      ------------------------------------------------------------
consensus_12863#0      TTGAAAAACTAGTATAATGGAGAAATATTGCTGTTTAGGCACATCGAAAATGTGTTGTTA 1543
consensus_12863#3      ------------------------------------------------------------
                                                                                   

consensus_12863#1      ------------------------------------------------------------
consensus_12863#2      ------------------------------------------------------------
consensus_12863#0      GTATGCACATTGGATGTGATTATGCTGCAACATATATAAACCGTTTATATGAAACAAAAA 1603
consensus_12863#3      ------------------------------------------------------------
                                                                                   

consensus_12863#1      ----
consensus_12863#2      ----
consensus_12863#0      GGAA 1607
consensus_12863#3      ----