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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12994#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 12 consensus length = 2210 fasta sequence
[AAGGTGGCCCTTTTCTCGGCTTCTCGCTGCTCTTGCTTTGCTTCGCTTCTCCTCCTCTTCCTCCTCCTTCCTCGGCGGCTGCTCCGGCTCGGATTCCGGTGAGCCGTCGCGTTCGTGGTACGGCGGAGGAAGCGAGGTTGCGCCCTTTCCGACCGTTTCTTGGCTATCCGCCCCGATTGGAGAAAGCTGGGTGTTTCTTTTTTCTTTCTTTTTTTGGTTCAGGGATCAGAGAAGTTCAGAACTGGTGGAGGTGCTCATATCCGCGAGTCAGTACCACCTAATCATATGGAGGATTATCCAAGTGGGAGATCAAAAGCAGCTATTGGATTTCTCAGAAGAGGTGGTGGTTTCTCTTCGAGAAATCAAAGCACTGAAGAGAGGACCATTCAGAACTATGATGGACCAGGAATCACCACAAGACTCAATCCGATGAAAACCAGGCTGTCTGATAATCAGGAGAGACCAAGATACCTACGTGACTCATTCAGATCTTCAACCTCAATGGCCATTCATGGAAGCTCTTCCAAAGTTCCGCTTAGGAAATTCGGTGACGAAAAACGAAGGCAAACGTTGTTGGCAGGGGTAGACATTGCTGAAAGTAGCAGCAGAAATGCTGGGGGCAAACATCTGGAGGGTAGTAATAAGAGAATCGTTGTCGATGATAGGAGTTCAGATGTTCTGCATACTGAAACAGAAGGCTTGGCTACTGAACAAGACCAATTGATAGCACCCAATGCTGGAGTTTCTGATTCTGCTAGTTCGTCAGATATTTCTGAACATGCAGTTGAATCCTTGGTAAGGAGTGCTGCTCCAAGTTCTAGAACCCGTAGACAGAAGGACAAAGAATTGAATTTGGGTCAATCAGGAGTTTGCTCTTCGTCATGTACTAACAGGCCTACTATATCAAGATATGCTCCTGCCGATGTGAAGCGACCGTGTAATCATGCTAGCGGAGTACAACAGCATGGTCATAACAATCTGGACTGTACTTCAGTACCTAATTTTCTGCCATCAGGTTGCTCATCTGGTTCTGTTTATAGCAGGAGGTTTGATGCAATGAGAAAAAGGACTTCTGATGGGGGAAGTTTTTCTAGATCAAGGGGCTTAAGTGGAACGGCTAGCTTAGACGATTCACCTCCTGCATACCCTGCCATTGCTGGTCCTAGAATCAGAACAACTACAACTGAACGGGCTTCACAACAAAATGCACTAAGAAGCAGAAGGAATTTTCAGGATTCAGCAGTGTCAGTAAGGACAAGAAGACCTCCTTGGGGTGCTAGGTTCAGGATCTCTGAGGAAAGAGAGGATGGCATGATTTCTCAGCGTGATTCTTCCATAGGGAATCAACAGTCAGATCAGGTGCATTCATCTTCGGAAGAGGCCTCTACAGAGAGCTCCTCAAGACCATTCTCTGCAGAATTACCTCATGCAATTTACTCATCTAGAGGAGAGGGATCAAATGCTTTCACTGCAAGGAGAAGAAGATCAAGCTCCCTTTATGAGGAAAGACCTCCACAGACATTCCATGATCTTTTCAGAGAAAGAAATGGCCGAAGACACATATCCATAGAAGGAATTGCAGAGGTATTACTAGCTCTGGACAGGATTGAACAAGAAGCAGAACTGACTTATGAGCAATTGATGGTGTTGGAGACAAATATATTGCTTGGTGCTTTCACCTCCCATGATCAGCATAGTGACATGCGCATGGATATCGACAACATGTCCTATGAGGAATTATTAGCATTAGGAGACAGAATAGGCTCTGTTAGCACCGCTCTTTCTGAGGAGCAATTTGTGAAATGCCTCAGAAGAAGTATATATATACCA-GTGGCTACAAAAGCAAACGCGCAAGTTGTAGACGACATCAAATGCAGCATATGCCAGGAGGAGTACATAGAGGGTGAAGAAGTTGGACGGCTGGGATGTGAGCATCAGTACCATGTGTGCTGCATTCACCAGTGGCTCAGGCAGAAGAACTGGTGTCCAATATGCAAAGCTTCAGCTGAACCTTCTACTGTGAGCTAATCCCACCTGGGAGATTCAAGCTTGTAAATATTTATCATGGATTTGGTGTCCATCTTTTTGTGGAAACTGTAAATAATCTTGACCTTGTTCACTCCAATTTGTGATTATCAAATCAGCTGTGCTCTGAAAACAAAAAAAAAACTTCAATGGTTCTCATGGTTAAAAAAAAAAGCTTTTCTATG]
[+] EMBL CB647335 [AAGGTGGCCCTTTTCTCGGCTTCTCGCTGCTCTTGCTTTGCTTCGCTTCTCCTCCTCTTCCTCCTCCTTCCTCGGCGGCTGCTCCGGCTCGGATTCCGGTGAGCCGTCGCGTTCGTGGTACGGCGGAGGAAGCGAGGTTGCGCCCTTTCCGACCGTTTCTTGGCTATCCGCCCCGATTGGAGAAAGCTGGGTGTTTCTTTTTTCTTTCTTTTTTTGGTTCAGGGATCAGAGAAGTTCAGAACTGGTGGAGGTGCTCATATCCGCGAGTCAGTACCACCTAATCATATGGAGGATTATCCAAGTGGGAGATCAAAAGCAGCTATTGGATTTCTCAGAAGAGGTGGTGGTTTCTCTTCGAGAAATCAAAGCACTGAAGAGAGGACCATTCAGAACTATGATGGACCAGGAATCACCACAAGACTCAATCCGATGAAAACCAGGCTGTCTGATAATCAGGAGAGACCAAGATACCTACGTGACTCATTCAGATCTTCAACCTCAATGGCCATTCATGGAAGCTCTTCCAAAGTTCCGCTTAGGAAATTCGGTGACGAAAAACGAAGGCAAACGTTGTTGGCAGGGGTAGACATTGCTGAAAGTAGCAGCAGAAATGCTGGGGGCAAACATCTGGAGGGTAGTAATAAGAGAATCGTTGTCGATGATAGGAGTTCAGATGTTCTGCATACTGAAACAGAAGGCTTGGCTACTGAACAAGACCAATTGATAGCACCCAATGCTGGAGTTTCTGATTCTGCTAGTTCGTCAGATATTTCTGAACATGCAGTTGAATCCTTGGTAAG ]
[+] EMBL CB627815 [ TTCTCCGCTTCTCTCTGCTCTTGCTTTGCTTCGCTTCTCCTCCTCTTCCTCCTCCTTCCTCGGCGGCTGCTCCGGCTCGGATTCCGGTGAGCCGTCGCGTTCGTGGTACGGCGGAGGAAGCGAGGTTGCGCCCTTTCCGACCGTTTCTTGGCTATCCGCCCCGATTTGAGAAAGCTGGGTGTTTCTTTTTTCTTTCTTTTTTTGGTTCAGGGATCAGAGAAGTTCAGAACTGGTGGAGGTGCTCATATCCGCGAGTCAGTACCAC ]
[+] EMBL CB654489 [ GCTTTGCTTCGCTTCTCCTCCTCTTCCTCCTCCTTCCTCGGCGGCTGCTCCGGCTCGGATTCCGGTGAGCCGTCGCGTTCGTGGTACGGCGGAGGAAGCGAGGTTGCGCCCTTTCCGACCGTTTCTTGGCTATCCGCCCCGATTGGAGAAAGCTGGGTGTTTCTTTTTTCTTTCTTTTTTTGGTTCAGGGATCAGAGAAGTTCAGAACTGGTGGAGGTGCTCATATCCGCGAGTCAGTACCACCTAATCATATGGAGGATTATCCAAGTGGGAGATCAAAAGCAGCTATTGGATTTCTCAGAAGAGGTGGTGGTTTCTCTTCGAGAAATCAAAGCACTGAAGAGAGGACCATTCAGAACTATGATGGACCAGGAATCACCACAAGACTCAATCCGATGAAAACCAGGCTGTCTGATAATCAGGAGAGACCAAGATACCTACGTGACTCATTCAGATCTTCAACCTCAATGGCCATTCATGGAAGCTCTTCCAAAGTTCCGCTTAGGAAATTCGGTGACGAAAAACGAAGGCAAACGTTGTTGGCAGGGGTAGACATTGCTGAAAGTAGCAGCAGAAATGCTGGGGGCAAACATCTGGAGGGTAGTAATAAGAGAATCGTTGTCGATGATAGGAGTTCAGATGTTCTGCATACTGAAACAGAAGGCTTGGCTACTGAACAAGACCAATTGATAGCACCCAATGCTGGAGTTTCTGATTCTGCTAGTTCGTCAGATATTTCTGAACATGCAGTTGAATCCTTGGTAAGGAGTGCTGC ]
[+] EMBL AK120070 [ TTTGCTTCGCTTCTCCTCCTCTTCCTCCTCCTTCCTCGGCGGCTGCTCCGGCTCGGATTCCGGTGAGCCGTCGCGTTCGTGGTACGGCGGAGGAAGCGAGGTTGCGCCCTTTCCGACCGTTTCTTGGCTATCCGCCCCGATTGGAGAAAGCTGGGTGTTTCTTTTTTCTTTCTTTTTTTGGTTCAGGGATCAGAGAAGTTCAGAACTGGTGGAGGTGCTCATATCCGCGAGTCAGTACCACCTAATCATATGGAGGATTATCCAAGTGGGAGATCAAAAGCAGCTATTGGATTTCTCAGAAGAGGTGGTGGTTTCTCTTCGAGAAATCAAAGCACTGAAGAGAGGACCATTCAGAACTATGATGGACCAGGAATCACCACAAGACTCAATCCGATGAAAACCAGGCTGTCTGATAATCAGGAGAGACCAAGATACCTACGTGACTCATTCAGATCTTCAACCTCAATGGCCATTCATGGAAGCTCTTCCAAAGTTCCGCTTAGGAAATTCGGTGACGAAAAACGAAGGCAAACGTTGTTGGCAGGGGTAGACATTGCTGAAAGTAGCAGCAGAAATGCTGGGGGCAAACATCTGGAGGGTAGTAATAAGAGAATCGTTGTCGATGATAGGAGTTCAGATGTTCTGCATACTGAAACAGAAGGCTTGGCTACTGAACAAGACCAATTGATAGCACCCAATGCTGGAGTTTCTGATTCTGCTAGTTCGTCAGATATTTCTGAACATGCAGTTGAATCCTTGGTAAGGAGTGCTGCTCCAAGTTCTAGAACCCGTAGACAGAAGGACAAAGAATTGAATTTGGGTCAATCAGGAGTTTGCTCTTCGTCATGTACTAACAGGCCTACTATATCAAGATATGCTCCTGCCGATGTGAAGCGACCGTGTAATCATGCTAGCGGAGTACAACAGCATGGTCATAACAATCTGGACTGTACTTCAGTACCTAATTTTCTGCCATCAGGTTGCTCATCTGGTTCTGTTTATAGCAGGAGGTTTGATGCAATGAGAAAAAGGACTTCTGATGGGGGAAGTTTTTCTAGATCAAGGGGCTTAAGTGGAACGGCTAGCTTAGACGATTCACCTCCTGCATACCCTGCCATTGCTGGTCCTAGAATCAGAACAACTACAACTGAACGGGCTTCACAACAAAATGCACTAAGAAGCAGAAGGAATTTTCAGGATTCAGCAGTGTCAGTAAGGACAAGAAGACCTCCTTGGGGTGCTAGGTTCAGGATCTCTGAGGAAAGAGAGGATGGCATGATTTCTCAGCGTGATTCTTCCATAGGGAATCAACAGTCAGATCAGGTGCATTCATCTTCGGAAGAGGCCTCTACAGAGAGCTCCTCAAGACCATTCTCTGCAGAATTACCTCATGCAATTTACTCATCTAGAGGAGAGGGATCAAATGCTTTCACTGCAAGGAGAAGAAGATCAAGCTCCCTTTATGAGGAAAGACCTCCACAGACATTCCATGATCTTTTCAGAGAAAGAAATGGCCGAAGACACATATCCATAGAAGGAATTGCAGAGGTATTACTAGCTCTGGACAGGATTGAACAAGAAGCAGAACTGACTTATGAGCAATTGATGGTGTTGGAGACAAATATATTGCTTGGTGCTTTCACCTCCCATGATCAGCATAGTGACATGCGCATGGATATCGACAACATGTCCTATGAGGAATTATTAGCATTAGGAGACAGAATAGGCTCTGTTAGCACCGCTCTTTCTGAGGAGCAATTTGTGAAATGCCTCAGAAGAAGTATATATATACCA GTGGCTACAAAAGCAAACGCGCAAGTTGTAGACGACATCAAATGCAGCATATGCCAGGAGGAGTACATAGAGGGTGAAGAAGTTGGACGGCTGGGATGTGAGCATCAGTACCATGTGTGCTGCATTCACCAGTGGCTCAGGCAGAAGAACTGGTGTCCAATATGCAAAGCTTCAGCTGAACCTTCTACTGTGAGCTAATCCCACCTGGGAGATTCAAGCTTGTAAATATTTATCATGGATTTGGTGTCCATCTTTTTGTGGAAACTGTAAATAATCTTGACCTTGTTCACTCCAATTTGTGATTATCAAATCAGC ]
[+] EMBL CB636624 [ GCCCTTTCCGACCGTTTCTTGGCTATCCGCCCCGATTGGAGAAAGCTGGGTGTTTCTTTTTTCTTTCTTTTTTTGGTTCAGGGATCAGAGAAGTTCAGAACTGGTGGAGGTGCTCATATCCGCGAGTCAGTACCACCTAATCATATGGAGGATTATCCAAGTGGGATATCAAAAGCATCTATTGGATTTCTCACAAGAGGTGGTGGTTTCTCTTCGAGAAATCAAATCACTGAACAGAGGACCATTCATAACTATGATGGACCAGGAATCACCACAAAACTCAGTCCGATGAAAACCAGGCTGTCTGATAATCAAGAGAGACCAAGATTCCTACGTGACTCATTCACATCTTCAACCTCAATGGCCATTCATGGAAGCTCTTCCAAAGTTCCGCTTAGGAAATTCGGTGACGAAAAACGAATGCAAACGTTG ]
[+] EMBL CB636626 [ GCCCTTTCCGACCGTTTCTTGGCTATCCGCCCCGATTGGAGAAAGCTGGGTGTTTCTTTTTTCTTTCTTTTTTTGGTTCAGGGATCAGAGAAGTTCAGAACTGGTGGAGGTGCTCATATCCGCGAGTCAGTACCACCTAATCATATGGAGGATTATCCAAGTGGGAGATCAAAAGCAGCTATTGGATTTCTCAGAAGAGGTGGTGGTTTCTCTTCGAGAAATCAAAGCACTGAAGAGAGGACCATTCAGAACTATGATGGACCAGGAATCACCACAAGACTCAATCCGATGAAAACCAGGCTGTCTGATAATCAGGAGAGACCAAGATACCTACGTGACTCATTCAGATCTTCAACCTCAATGGCCATTCATGGAAGCTCTTCCAAAGTTCCGCTTAGGAAATTCGGTGACGAAAAACGAAGGCAAACGTTGTTGGCAGGGGTAGACATTGCTGAAAGTAGCAGCAGAAATGCTGGGGGCAAACATCTGGAGGGTAGTAATAAGAGAATCGTTGTCGATGATAGGAGTTCAGATGTTCTGCATACTGAAACAGAAGGCTTGGCTACTGAACAAGACCAATTGATAGCACCCAATGCTGGAGTTT ]
[-] EMBL CB654490 [ CAACAGTCAGATCAGGTGCATTCATCTTCGGAAGAGGCCTCTACAGAGAGCTCCTCAAGACCATTCTCTGCAGAATTACCTCATGCAATTTACTCATCTAGAGGAGAGGGATCAAATGCTTTCACTGCAAGGAGAAGAAGATCAAGCTCCCTTTATGAGGAAAGACCTCCACAGACATTCCATGATCTTTTCAGAGAAAGAAATGGCCGAAGACACATATCCATAGAAGGAATTGCAGAGGTATTACTAGCTCTGGACAGGATTGAACAAGAAGCAGAACTGACTTATGAGCAATTGATGGTGTTGGAGACAAATATATTGCTTGGTGCTTTCACCTCCCATGATCAGCATAGTGACATGCGCATGGATATCGACAACATGTCCTATGAGGAATTATTAGCATTAGGAGACAGAATAGGCTCTGTTAGCACCGCTCTTTCTGAGGAGCAATTTGTGAAATGCCTCAGAAGAAGTATATATATACCA GTGGCTACAAAAGCAAACGCGCAAGTTGTAGACGACATCAAATGCAGCATATGCCAGGAGGAGTACATAGAGGGTGAAGAAGTTGGACGGCTGGGATGTGAGCATCAGTACCATGTGTGCTGCATTCACCAGTGGCTCAGGCAGAAGAACTGGTGTCCAATATGCAAAGCTTCAGCTGAACCTTCTACTGTGAGCTAATCCCACCTGGGAGATTCAAGCTTGTAAATATTTATCATGGATTTGGTGTCCATCTTTTTGTGGAAACTGTAAATAATCTTGACCTTGTTCACTCCAAGTTGTGATTATCAAATCAGCTGTGCTCTGAAAA ]
[-] EMBL CB647336 [ CTACAGAGAGCTCCTCAAGACCATTCTCTGCAGAATTACCTCATGCAATTTACTCATCTAGAGGAGAGGGATCAAATGCTTTCACTGCAAGGAGAAGAAGATCAAGCTCCCTTTATGAGGAAAGACCTCCACAGACATTCCATGATCTTTTCAGAGAAAGAAATGGCCGAAGACACATATCCATAGAAGGAATTGCAGAGGTATTACTAGCTCTGGACAGGATTGAACAAGAAGCAGAACTGACTTATGAGCAATTGATGGTGTTGGAGACAAATATATTGCTTGGTGCTTTCACCTCCCATGATCAGCATAGTGACATGCGCATGGATATCGACAACATGTCCTATGAGGAATTATTAGCATTAGGAGACAGAATAGGCTCTGTTAGCACCGCTCTTTCTGAGGAGCAATTTGTGAAATGCCTCAGAAGAAGTATATATATACCA GTGGCTACAAAAGCAAACGCGCAAGTTGTAGACGACATCAAATGCAGCATATGCCAGGAGGAGTACATAGAGGGTGAAGAAGTTGGACGGCTGGGATGTGAGCATCAGTACCATGTGTGCTGCATTCACCAGTGGCTCAGGCAGAAGAACTGGTGTCCAATATGCAAAGCTTCAGCTGAACCTTCTACTGTGAGCTAATCCCACCTGGGAGATTCAAGCTTGTAAATATTTATCATGGATTTGGTGTCCATCTTTTTGTGGAAACTGTAAATAATCTTGACCTTGTTCACTCCAGTTTGTGATTATCAAATCAGCTGTGCTCTGAAAACAAAAAAAAAA ]
[-] EMBL CB627816 [ ACTCATCTAGAGTAGAGGGATCAAATGCTTTCACTGCAAGGAGAAGAAGATCAAGCTCCCTTTATGAGGAAAGACCTCCACAGACATTCCATGATCTTTTCAGAGAAAGAAATGGCCAAAGACACATATCCATAGAAGGAATTGCAGAGGTATTACTAGCTCTGGACAGGATTGAACAAGAAGCAGAACTGACTTATGAGCAATTGATGGTGTTGGAGACAAATATATTGCTTGGTGCTTTCACCTCCCATGATCAGCATAGTGACATGCGCATGGATATCGACAGCATGTCCTATGAGGAATTATTAGCATTAGGAGACAGAATAGGCTCTGTTAGCACCGCTCTTTCTGAGGAGCAATTTGTGAAATGCCTCAGAAGAAGTATATATATACCA GTGGCTACAAAAGCAAACGCGCAAGTTGTAGACGACATCAAATGCAGCATATGCCAGGAGGAGTACATAGAGGGTGAAGAAGTTGGACGGCTGGGATGTGAGCATCAGTACCATGTGTGCTGCATTCACCAGTGGCTCAGGCAGAAGAACTGGTGTCCAATATGCAAAGCTTCAGCTGAACCTTCTACTGTGAGCTAATCCCACCTGGGAGATTCAAGCTTGTAAATATTTATCATGGATTTGGTGTCCATCTTTTTGTGGAAACTGTAAATAATCTTGACCTTATTCACTCCAATTTGTGATTATCAAATCAGCTGTGCTCTGAAAACAAAAATAATCCTTCAATGGTTCTCATGGTTAAAAAAAAAAGCTTTTCTATG]
[-] EMBL CB636627 [ gtgTGGTGCTTTCACCTCCCATGATCAGCATAGTGACATGCGCATGGATATCGACAACATGTCCTATGAGGAATTATTAGCATTAGGAGACAGAATAGGCTCTGTTAGCACCGCTCTTTCTGAGGAGCAATTTGTGAAATGCCTCAGAAGAAGTATATATATACCA GTGGCTACAAAAGCAAACGCGCAAGTTGTAGACGACATCAAATGCAGCATATGCCAGGAGGAGTACATAGAGGGTGAAGAAGTTGGACGGCTGGGATGTGAGCATCAGTACCATGTGTGCTGCAATCACCAGTGGCTCAGGCAGAAGAACTGGTGTCCAATATGCAAAGCTTCAGCTGAACCTTCTACTGTGAGCTAATCCCACCTGGGAGATTCAAGCTTGTAAATATTTATCATGGATTTGGTGTCC TCTTTTTGTGGAAACTGTAAATAATaatg ]
[-] EMBL CB636625 [ ATGATCAGCATAGTGACATGCGCATGGATATCGACAACATGTCCTATGAGGAATTATTAGCATTAGGAGACAGAATAGGCTCTGTTAGCACCGCTCTTTCTGAGGAGCAATTTGTGAAATGCCTCAGAAGAAGTATATATATACCA GTGGCTACAAAAGCAAACGCGCAAGTTGTAGACGACATCAAATGCAGCATATGCCAGGAGGAGTACATAGAGGGTGAAGAAGTTGGACGGCTGGGATGTGAGCATCAGTACCATGTGTGCTGCATTCACCAGTGGCTCAGGCAGAAGAACTGGTGTCCAATATGCAAAGCTTCAGCTGAACCTTCTACTGTGAGCTAATCCCACCTGGGAGATTCAAGCTTGTAAATATTTATCATGGATTTGGTGTCC TCTTTTTGTGGAAACTGTAAATAATCTT ]
[+] EMBL BI812106 [ AGTATATATATACCACGTGGCTACCAAAGCCAACGCGCAAGTTGTAGACGACATCAAATGCAGCATATGCCAGGAGGAGTACATAGAGGGTGAAGAAGTTGGACGGCTGGGATGTGAGCATCAGTACCATGTGTGCTGCATTCACCAGTGGCTCAGGCAGAAGAACTGGTGTCCCATATGCAAAGCTTCAGCTGAACCTTCTACTGTGAGCTAATCCCACCTGGGAGATTCAAGCTTGTAAATATTTATCATGGATTTGGTGTCCATCTTTTTGTGGAAACTGTAAATAATCTTGACCTTGTTCACTCC ATTTGTGATTATCAAATCAGCTGTGCTCTGAAAACCAAAAAAAAAa ]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||