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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13015#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 2622 fasta sequence
[CCGGAGCGCAGTACGTGACACCCGCACACGAAGCCATGGGACGCCGCGCGCGCGCTCTCCTCCACGCGCCGGCGCCGCTCCTGCTGCTGCTGGCACTGGCCGCCGCGGCGGCGGCGGTCGCCGTGGCGTCGGGCCCGCCCTTCTCCTGCGGCGCGCCGTCCAGCGCGGCGTTCTGCAACCCGAGGCTGCCCATCGAGCAGCGCGCGGACGACCTCGTGTCGAGGCTGACGCTGGAGGAGAAGATCTCGCAGCTCGGGGACCAGTCGCCGGCCGTCGACCGGCTCGGCGTCCCGGCGTACAAGTGGTGGTCGGAGGCGCTCCACGGCGTCTCCAACGCCGGCCGCGGCATCCACCTCGACGGCCCGCTCCGCGCCGCCACCAGCTTCCCGCAGGTCATCCTCACCGCCGCGTCATTCAACCCGCACCTCTGGTACCGTATCGGCCAGGTGATCGGCACGGAGGCGAGGGCGGTGTACAACAACGGGCAGGCGGAAGGGCTCACGTTCTGGGCGCCAAACATCAACGTGTTCAGGGACCCGAGGTGGGGCCGCGGGCAGGAGACCCCCGGCGAGGACCCCACGGTGACCGGCAAGTACGCCGCCGTGTTCGTCCGCGGCGTCCAGGGCTACGCCCTCGCCGGCGCCATCAACTCCACCGACCTCGAGGCCTCCGCCTGCTGCAAGCACTTCACCGCCTACGACCTCGAGAACTGGAAGGGCGTCACCCGCTACGCCTTCGACGCCAAGGTGACGGCGCAGGACCTGGCCGACACGTACAACCCTCCGTTCAGAAGCTGCGTCGAGGACGGCGGGGCCAGCGGCATCATGTGCTCCTACAACCGCGTCAATGGCGTGCCAACTTGTGCCGATTACAACCTCCTCTCCAAAACTGCAAGGG-GAGATTGGAGGTTTTACGGATATATCACCTCAGATTGTGATGCTGTGTCCATCATCCATGATGTCCAAGGATATGCCAAGACAGCGGAAGATGCAGTTGCAGATGTCCTCAAGGCT-GGAATGGACGTGAACTGCGGCAGCTACGTGCAGGAACATGGTCTATCTGCAATCCAGCAAGGGAAGATCACAGAACAAGACATCAACAGAGCCCTCCACAACCTCTTCGCTGTCAGGATGAGGCTGGGGCTCTTCAACGGCAACCCAAAGTACAACCGCTACGGTAACATTGGCCCAGACCAGGTGTGCACGCAGGAGCACCAAAACC-TTGCCCTTGAAGCAGCACAACA-TGGCGTTGTCCTAC-TGAAGAACGACGCCAATGCTCTCCCCCTGTCCAAATCACAAGTCTCATCCATTGCTGTCATTGGGCACAACGCAAATGACGCCACGAGATTGCTTGGGAATTACTTCGGCCCTCCTTGCATATCGGTGACTCCTCTCCAAGTGCTGCAAGGCTATGTGAAGGACACCAGGTTCCTAGCTGGGTGCAACTCGGCTGCCTGCAATGTGTCATCAATTGGTGAAGCGGCGCAATTGGCAAGTTCAGTGGACTACGTTGTGCTGTTCATGGGATTAGACCAAGATCAGGAGAGGGAAGAGGTTGATAGGCTGGAACTGTCGCCCCCAGGAATGCAGGAGAACCTCACCAACACGGTCGCTAACGCGGCAAAGAAGCCGGTGATCTTGGTGCTACTGTGTGGTGGTCCAGTGGATGTGACCTTTGCTAAGTATAATCCCAAGATTGGGGCCATCCTGTGGGCTGGTTACCCTGGCGAGGCTGGAGGGATTGCGATTGCTCAGGTCCTCTTTGGAGAGCACAACCCTGGTGGAAGGCTGCCAGTGACCTGGTATCCAAAGGAGTTCACGAGCGTGCCCATGACAGATATGCGGATGCGTGCCGATCCATCCACGGGATATCCCGGACGAACGTACAGGTTCTACCGAGGCAACACCGTCTACAAGTTCGGCTACGGCCTCAGCTACTCGAAGTACTCTCACCACTTCGTCGCAAACGGCACGAAGCTGCCGTCTTTGAGCAGCATCGATGGCCTGAAGGCGATGGCGACAGCAGCTGCAGGCACGGTGAGCTATGACGTCGAAGAGATTGGCCCCGAGACGTGTGACAAGCTCAAGTTCCCGGCGCTCGTCAGGGTGCAGAACCATGGCCCCATGGACGGC-AGGCACCCCGTGCTGC-TCTTCCTGCGCTGGCCGAACGGCGCGGCGGACGGCGGCAGGCCGGCGAG-CCAGCTG-ATCGGCTTCCAGAGCCTGCACCTCAAGTCGATGCAGACTGTCCATGTGGAGTTCGAGGTGAGCCCATGCAAGCACTTCAGCAGAGCGACGGAGGACGGCAAGAAGGTGATTGATCATGGGTCGCATTTCATGATGGTTGGCGATGATGAGTTCGAGATGAGCTTCACGCCTTGATCGAGCTGGGTCCAGTTCATTGAGTTGGGGTTGGGTACTGATCGAGCTATTCCAAGCCAGCGCATGGTTGCATTTCATTTGCTTGCTTGGGAAATCTGCTGCTTCGTTCAGGGGGCTGAGGATTTAAGTTGCTCAGCAAGTGTAACCATCTATCTTCTTTTCTCAAAAAGAAAAAAAAAGAATCTAACTTATGTGAACAAGAGAATGATTATTTAAGAAAGATTGAGGCACAAAAAAAAAAAGA]
[+] EMBL AK119887 [CCGGAGCGCAGTACGTGACACCCGCACACGAAGCCATGGGACGCCGCGCGCGCGCTCTCCTCCACGCGCCGGCGCCGCTCCTGCTGCTGCTGGCACTGGCCGCCGCGGCGGCGGCGGTCGCCGTGGCGTCGGGCCCGCCCTTCTCCTGCGGCGCGCCGTCCAGCGCGGCGTTCTGCAACCCGAGGCTGCCCATCGAGCAGCGCGCGGACGACCTCGTGTCGAGGCTGACGCTGGAGGAGAAGATCTCGCAGCTCGGGGACCAGTCGCCGGCCGTCGACCGGCTCGGCGTCCCGGCGTACAAGTGGTGGTCGGAGGCGCTCCACGGCGTCTCCAACGCCGGCCGCGGCATCCACCTCGACGGCCCGCTCCGCGCCGCCACCAGCTTCCCGCAGGTCATCCTCACCGCCGCGTCATTCAACCCGCACCTCTGGTACCGTATCGGCCAGGTGATCGGCACGGAGGCGAGGGCGGTGTACAACAACGGGCAGGCGGAAGGGCTCACGTTCTGGGCGCCAAACATCAACGTGTTCAGGGACCCGAGGTGGGGCCGCGGGCAGGAGACCCCCGGCGAGGACCCCACGGTGACCGGCAAGTACGCCGCCGTGTTCGTCCGCGGCGTCCAGGGCTACGCCCTCGCCGGCGCCATCAACTCCACCGACCTCGAGGCCTCCGCCTGCTGCAAGCACTTCACCGCCTACGACCTCGAGAACTGGAAGGGCGTCACCCGCTACGCCTTCGACGCCAAGGTGACGGCGCAGGACCTGGCCGACACGTACAACCCTCCGTTCAGAAGCTGCGTCGAGGACGGCGGGGCCAGCGGCATCATGTGCTCCTACAACCGCGTCAATGGCGTGCCAACTTGTGCCGATTACAACCTCCTCTCCAAAACTGCAAGGG GAGATTGGAGGTTTTACGGATATATCACCTCAGATTGTGATGCTGTGTCCATCATCCATGATGTCCAAGGATATGCCAAGACAGCGGAAGATGCAGTTGCAGATGTCCTCAAGGCT GGAATGGACGTGAACTGCGGCAGCTACGTGCAGGAACATGGTCTATCTGCAATCCAGCAAGGGAAGATCACAGAACAAGACATCAACAGAGCCCTCCACAACCTCTTCGCTGTCAGGATGAGGCTGGGGCTCTTCAACGGCAACCCAAAGTACAACCGCTACGGTAACATTGGCCCAGACCAGGTGTGCACGCAGGAGCACCAAAACC TTGCCCTTGAAGCAGCACAACA TGGCGTTGTCCTAC TGAAGAACGACGCCAATGCTCTCCCCCTGTCCAAATCACAAGTCTCATCCATTGCTGTCATTGGGCACAACGCAAATGACGCCACGAGATTGCTTGGGAATTACTTCGGCCCTCCTTGCATATCGGTGACTCCTCTCCAAGTGCTGCAAGGCTATGTGAAGGACACCAGGTTCCTAGCTGGGTGCAACTCGGCTGCCTGCAATGTGTCATCAATTGGTGAAGCGGCGCAATTGGCAAGTTCAGTGGACTACGTTGTGCTGTTCATGGGATTAGACCAAGATCAGGAGAGGGAAGAGGTTGATAGGCTGGAACTGTCGCCCCCAGGAATGCAGGAGAACCTCACCAACACGGTCGCTAACGCGGCAAAGAAGCCGGTGATCTTGGTGCTACTGTGTGGTGGTCCAGTGGATGTGACCTTTGCTAAGTATAATCCCAAGATTGGGGCCATCCTGTGGGCTGGTTACCCTGGCGAGGCTGGAGGGATTGCGATTGCTCAGGTCCTCTTTGGAGAGCACAACCCTGGTGGAAGGCTGCCAGTGACCTGGTATCCAAAGGAGTTCACGAGCGTGCCCATGACAGATATGCGGATGCGTGCCGATCCATCCACGGGATATCCCGGACGAACGTACAGGTTCTACCGAGGCAACACCGTCTACAAGTTCGGCTACGGCCTCAGCTACTCGAAGTACTCTCACCACTTCGTCGCAAACGGCACGAAGCTGCCGTCTTTGAGCAGCATCGATGGCCTGAAGGCGATGGCGACAGCAGCTGCAGGCACGGTGAGCTATGACGTCGAAGAGATTGGCCCCGAGACGTGTGACAAGCTCAAGTTCCCGGCGCTCGTCAGGGTGCAGAACCATGGCCCCATGGACGGC AGGCACCCCGTGCTGC TCTTCCTGCGCTGGCCGAACGGCGCGGCGGACGGCGGCAGGCCGGCGAG CCAGCTG ATCGGCTTCCAGAGCCTGCACCTCAAGTCGATGCAGACTGTCCATATGGAGTTCGAGGTGAGCCCATGCAAGCACTTCAGCAGAGCGACGGAGGACGGCAAGAAGGTGATTGATCATGGGTCGCATTTCATGATGGTTGGCGATGATGAGTTCGAGATGAGCTTCACGCCTTGATCGAGCTGGGTCCAGTTCATTGAGTTGGGGTTGGGTACTGATCGAGCTATTCCAAGCCAGCGCATGGTTGCATTTCATTTGCTTGCTTGGGAAATCTGCTGCTTCGTTCAGGGGGCTGAGGATTTAAGTTGCTCAGCAAGTGTAACCATCTATCTTCTTTTCTCAAAAAGAAAAAAAAAGAATCTAACTTATGTGAACAAGAGAATGATTATTTAAGAAAGATTGAGGCAC ]
[+] EMBL CB671635 [ GACACCCGCACACGAAGCCATGGGACGCCGCGCGCGCGCTCTCCTCCACGCGCCGGCGCCGCTCCTGCTGCTGCTGGCACTGGCCGCCGCGGCGGCGGCGGTCGCCGTGGCGTCGGGCCCGCCCTTCTCCTGCGGCGCGCCGTCCAGCGCGGCGTTCTGCAACCCGAGGCTGCCCATCGAGCAGCGCGCGGACGACCTCGTGTCGAGGCTGACGCTGGAGGAGAAGATCTCGCAGCTCGGGGACCAGTCGCCGGCCGTCGACCGGCTCGGCGTCCCGGCGTACAAGTGGTGGTCGGAGGCGCTCCACGGCGTCTCCAACGCCGGCCGCGGCATCCACCTCGACGGCCCGCTCCGCGCCGCCACCAGCTTCCCGCAGGTCATCCTCACCGCCGCGTCATTCAACCCGCACCTCTGGTACCGTATCGGCCAGGTGATCGGCACTGAGGCGAGGGCGGTGTACAACAACGGGCAGGCGGAAGGGCTCACGTTCTGGGCGCCAAACATCAACGTGTTCAGGGACCCGAGGTGGGGCCGCGGGCAGGAGACCCCCGGCGAGGACCCCACGGTGACCGGCAAGTACGCCGCCGTGTTCGTCCGCGGCGTCCAGGGCTACGCCCTCGCCGGCGCCATCAACTCCACCGACCTCGAGGCCTCCGCCTGCTGCAAGC ]
[+] EMBL CB643267 [ GCACACGAAGCCATGGGACGCCGCGCGCGCGCTCTCCTCCACGCGCCGGCGCCGCTCCTGCTGCTGCTGGCACTGGCCGCCGCGGCGGCGGCGGTCGCCGTGGCGTCGGGCCCGCCCTTCTCCTGCGGCGCGCCGTCCAGCGCGGCGTTCTGCAACCCGAGGCTGCCCATCGAGCAGCGCGCGGACGACCTCGTGTCGAGGCTGACGCTGGAGGAGAAGATCTCGCAGCTCGGGGACCAGTCGCCGGCCGTCGACCGGCTCGGCGTCCCGGCGTACAAGTGGTGGTCGGAGGCGCTCCACGGCGTCTCCAACGCCGGCCGCGGCATCCACCTCGACGGCCCGCTCCGCGCCGCCACCAGCTTCCCGCAGGTCATCCTCACCGCCGCGTCATTCAACCCGCACCTCTGGTACCGTATCGGCCAGGTGATCGGCACGGAGGCGAGGGCGGTGTACAACAACGGGCAGGCGGAAGGGCTCACGTTCTGGGCGCCAAACATCAACGTGTTCAGGGACCCGAGGTGGGGCCGCGGGCAGGAGACCCCCGGCGAGGACCCCACGGTGACCGGCAAGTACGCCGCCGTGTTCGTCCGCGGCGTCCAGGGCTACGCCCTCGCCGGCGCCATCAACTCCACCGACCTCGAGGCCTCCGCCTGCTGCAAGCACTTCACCGCCTACGACCTCGAGAACTGGAAGGGCGTCACCCGCTAC ]
[+] EMBL CB643270 [ GCACACGAAGCCATGGGACGCCGCGCGCGCGCTCTCCTCCACGCGCCGGCGCCGCTCCTGCTGCTGCTGGCACTGGCCGCCGCGGCGGCGGCGGTCGCCGTGGCGTCGGGCCCGCCCTTCTCCTGCGGCGCGCCGTCCAGCGCGGCGTTCTGCAACCCGAGGCTGCCCATCGAGCAGCGCGCGGACGACCTCGTGTCGAGGCTGACGCTGGAGGAGAAGATCTCGCAGCTCGGGGACCAGTCGCCGGCCGTCGACCGGCTCGGCGTCCCGGCGTACAAGTGGTGGTCGGAGGCGCTCCACGGCGTCTCCAACGCCGGCCGCGGCATCCACCTCGACGGCCCGCTCCGCGCCGCCACCAGCTTCCCGCAGGTCATCCTCACCGCCGCGTCATTCAACCCGCACCTCTGGTACCGTATCGGCCAGGTGATCGGCACGGAGGCGAGGGCGGTGTACAACAACGGGCAGGCGGAAGGGCTCACGTTCTGGGCGCCAAACATCAACGTGTTCAGGGACCCGAGGTGGGGCCGCGGGCAGGAGACCCCCGGCGAGGACCCCACGGTGACCGGCAAGTACGCCGCCGTGTTCGTCCGCGGCGTCCAGGGCTACGCCCTCGCCGGCGCCATCAACTCCACCGACCTCGAGGCCTCCGCCTGCTGCAAGCACTTCACCGCCTACGACCTCGAGAACTGGAAGGGCGTCACCCGCTACGCCTTCGACGCCAAGGTGACGGCGCAGGACCTGGCCGACACGTACAACCCTCCGTT ]
[+] EMBL C73113 [ CTTCGACGCCAAGGTGACGGCGCAGGACCTGGCCGACACGTACAACCCTCCGTTCAGAAGCTGCGTCGAGGACGGCGGGGCCAGCGGCATCATGTGCTCCTACAACCGCGTCAATGGCGTGCCAACTTGTGCCGATTACAACCTCCTCTCCAAAACTGCAAGGGTGAGATTGGAGGTTTTACGGATATATCACCTCAGATTGTGATGCTGTGTCCATCATCCATGATGTCCAAGGATATGCCAAGACAGCGGAAGATGCAGTTGCAGATGTCCTCAAGGCTGGGAATGGACGTGAACTGCGGCA NTACGTGCAGGAACATGGTCTATCTGCAATCCA ]
[+] EMBL C98928 [ AACCGCGTCAATGGCGTGCCAACTTGTGCCGATTACAACCTCCTCTCCAAAACTGCAAGGG GAGATTGGAGGTTTTACGGATATATCACCTCAGATTGTGATGCTGTGTCCATCATCCATGATGTCCAAGGATATGCCAAGACAGCGGAAGATGCAGTTGCAGATGTCCTCAAGGCT GGAATGGACGTGAACTGCGGCAG TACGTGCAGGAACATGGTCTATCTGCAATCCAGCAAGGGAAGATCACAGAACAAGACATCAACAGAGCCCTCCACAACCTCTTCGCTGTCAGGATGAGGCTGGGGCTCTTCAACGGCAATCCAAAGTACAACCGCTACGGTAACATTGGCCCAGACCAGGTGTGCACGCAGGAGCACCAAAACCTTTGCCCTTGAAGCAGCACAACATTGGCGTTGTCCTACTTGAAGAACGACGCCAt ]
[-] EMBL CB643271 [ TCACGAGCGTGCCCATGACAGATATGCGGATGCGTGCCGATCCATCCACGGGATATCCCGGACGAACGTACAGGTTCTACCGAGGCAACACCGTCTACAAGTTCGGCTACGGCCTCAGCTACTCGAAGTACTCTCACCACTTCGTCGCAAACGGCACGAAGCTGCCGTCTTTGAGCAGCATCGATGGCCTGAAGGCGATGGCGACAGCAGCTGCAGGCACGGTGAGCTATGACGTCGAAGAGATTGGCCCCGAGACGTGTGACAAGCTCAAGTTCCCGGCGCTCGTCAGGGTGCAGAACCATGGCCCCATGGACGGC AGGCACCCCGTGCTGC TCTTCCTGCGCTGGCCGAACGGCGCGGCGGACGGCGGCAGGCCGGCGAG CCAGCTG ATCGGCTTCCAGAGCCTGCACCTCAAGTCGATGCAGACTGTCCATGTGGAGTTCGAGGTGAGCCCATGCAAGCACTTCAGCAGAGCGACGGAGGACGGCAAGAAGGTGATTGATCATGGGTCGCATTTCATGATGGTTGGCGATGATGAGTTCGAGATGAGCTTCACCCCTTGATCGAGCTGGGTCCAGTTCATTGAGTTGGGGTTGGGTACTGATCGAGCTATTCCAAGCCAGCGCATGGTTGCATTTCATTTGCTTGCTTGGGAAATCTGCTGCTTCGTTCAGGGGGCTGAGGATTTAAGTTGCTCAGCAAGTGTAACCATCTATCTTCTTTTCTCAAAAAGAAAAAAAAAGAATCTAACTTATGTGAACAAGAGAATGATTATTTAAGAAAGATTGAGGCAAAAAAAAAAAAAGA]
[-] EMBL CB671636 [ GGACGAACGTACAGGTTCTACGGAGGCAACACCGTCTACAAGTTCGGCTACGGCCTCAGCTACTCGAAGTACTCTCACCACTTCGTCGCAAACGGCACGAAGCTGCCGTCTTTGAGCAGCATCGATGGCCTGAAGGCGATGGCGACAGCAGCTGCAGGCACGGTGAGCTATGACGTCGAAGAGATTGGCCCCGAGACGTGTGACAAGCTCAAGTTCCCGGCGCTCGTCAGGGTGCAGAACCATGGCCCCATGGACGGC AGGCACCCCGTGCTGC TCTTCCTGCGCTGGCCGAACGGCGCGGCGGACGGCGGCAGGCCGGCGAG CCAGCTG ATCGGCTTCCAGAGCCTGCACCTCAAGTCGATGCAGACTGTCCATGTGGAGTTCGAGGTGAGCCCATGCAAGCACTTCAGCAGAGCGACGGAGGACGGCAAGAAGGTGATTGATCATGGGTCGCATTTCATGATGGTTGGCGATGATGAGTTCGAGATGAGCTTCACGCCTTGATCGAGCTGGGTCCAGTTCATTGAGTTGGGGTTGGGTACTGATCGAGCTATTCCAAGCCAGCGCATGGTTGCATTTCATTTGCTTGCTTGGGAAATCTGCTGCTTCGTTCAGGGGGCTGAGGATTTAAGTTGCTCAGCAAGTGTAACCATCTATCTTCTTTTCTCAAAAAGAAAAAAAAAGAATGT ACTTATGTGAACAAGAGA ]
[-] EMBL CB643268 [ ACGAACGTACAGGTTCTACCGAGGCAACACCGTCTACAAGTTCGGCTACGGCCTCAGCTACTCGAAGTACTCTCACCACTTCGTCGCAAACGGCACGAAGCTGCCGTCTTTGAGCAGCATCGATGGCCTGAAGGCGATGGCGACAGCAGCTGCAGGCACGGTGAGCTATGACGTCGAAGAGATTGGCCCCGAGACGTGTGACAAGCTCAAGTTCCCGGCGCTCGTCAGGGTGCAGAACCATGGCCCCATGGACGGC AGGCACCCCGTGCTGC TCTTCCTGCGCTGGCCGAACGGCGCGGCGGACGGCGGCAGGCCGGCGAG CCAGCTG ATCGGCTTCCAGAGCCTGCACCTCAAGTCGATGCAGACTGTCCATGTGGAGTTCGAGGTGAGCCCATGCAAGCACTTCAGCAGAGCGACGGAGGACGGCAAGAAGGTGATTGATCATGGGTCGCATTTCATGATGGTTGGCGATGATGAGTTCGAGATGAGCTTCACGCCTTGATCGAGCTGGGTCCAGTTCATTGAGTTGGGGTTGGGTACTGATCGAGCTATTCCAAGCCAGCGCATGGTTGCATTTCATTTGCTTGCTTGGGAAATCTGCTGCTTCGTTCAGGGGGCTGAGGATTTAAGTTGCTCAGCAAGTGTAACCATCTATCTTCTTTTCTCAAAAAGAAAAAAAAAGAATCTAACTTATGTGAACAAGAGAATGATTATTTAAGAAA ]
[+] EMBL AU075385 [ ATGGCCCCATGGACGGC AGGCACCCCGTGCTGC TCTTCCTGCGCTGGCCGAACGGCGCGGCGGACGGCGGCAGGCCGGCGAG CCAGCTG ATCGGCTTCCAGAGCCTGCACCTCAAGTCGATGCAGACTGTCCATGTGGAGTTCGAGGTGAGCCCATGCAAGCACTTCAGCAGAGCGACGGAGGACGGCAAGAAGGTGATTGATCATGGGTCGCATTTCATGATGGTTGGCGATGATGAGTTCGAGATGAGCTTCACGCCTTGATCGAGCTGGGTCCAGTTCATTGAGTTGGGGTTGGGTACTGATCGAGCTATTCCAAGCCAGCGCATGGTTGCATTTCATTTGCTTGCTTGGGAAATCTGCTGCTTCGTTCAGGGGGCTGAGGATTTAAGTTGCTCAGCAAGTGTAACCATCTATCTTCTTTTCTCAAAAAGAAAAAAAAAGAATCTAACTTATGTGAACAAaaa ]
[+] EMBL C98929 [ CGGCAAGCCACCCCGTGCTGCTTCTTCCTGCGCTGGCCGAACGGCGCGCCGGACGGCGGCAAGCCGNCGAGCCCAGCTGAATCGGCTTCCAGAGCCTGCACCTCAAGTCGATGCAGACTGTCCATGTGGAGTTCGAGGTGAGCCCATGCAAGCACTTCAGCAGAGCGACGGAGGACGGCAAGAAGGTGATTGATCATGGGTCGCATTTCATGATGGTTGGCGATGATGAGTTCGAGATGAGCTTCACGCCTTGATCGAGCTGGGTCCAGTTCATTGAGTTGGGGTTGGGTACTGATCGAGCTATTCCAAGCCAGCGCATGGTTGCATTTCATTTGCTTGCTTGGGAAATCTGCTGCTTCGTTCAGGGGGCTGAGGATTTAAGTTGCTCAGCAAGTGTAACCATCTATCTTCTTTTCTCAAAAA ]
consensusID : consensus_13015#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 667 fasta sequence
[GGNCAATACCNTATTAAGGGACCAAGCTGGAGTCAACCGGGTGCGGCCGNTNGAGTTAACGCGTTTTCGAAACGTGTAACGAGCTTAAGTTCCGGGGGTTTGTCAGGGTGCAGAACCATGGCCCCATGNACGGCAGGCAACCCGTGCTGNTCTTCGTGGGGTGGCCGAAAGGCCGGGCGGACGGAGGCAGGCCGGCGAGCNAGCTGATCGGNTTCCAGAGCCTGCACCTCAAGTCGATGCAGACTGTCCATGTGGAGTTCGAGGTGAGCCCATGCAAGCAATTCAGCAGAGCACGGAGGACGGCAAGAAGGTGATTGATCATGGGTCGCATTTCATGATGGTTGGCGATGATGAGTTCGAGATGAGCTTCACGCCTTGATCGAGACTGGGTCCAGTTCATTGAGTTGGGGTTGGGTACTGATCGAGCTATTCCAAGCCAGCGCATGGTTGCATTTCATTTGCTTGCTTGGGAAATCTGCTGCTTCGTTCAGGGGGCTGAGGATTTAAGTTGCTCAGCAAGTGTAACCATCTATCTTCTTTTCTCAAAAAGAAAAAAAAAGAATCTAACTTATGTGAACAAGAGAATGATTATTTAAGAAAGATTGAGGCACCGTTGACGTCATAACAAAAAAAAAAAAAAAAAACGGTCCGCGGCCACTCGAGTCGA]
[-] EMBL BQ172868 [GGNCAATACCNTATTAAGGGACCAAGCTGGAGTCAACCGGGTGCGGCCGNTNGAGTTAACGCGTTTTCGAAACGTGTAACGAGCTTAAGTTCCGGGGGTTTGTCAGGGTGCAGAACCATGGCCCCATGNACGGCAGGCAACCCGTGCTGNTCTTCGTGGGGTGGCCGAAAGGCCGGGCGGACGGAGGCAGGCCGGCGAGCNAGCTGATCGGNTTCCAGAGCCTGCACCTCAAGTCGATGCAGACTGTCCATGTGGAGTTCGAGGTGAGCCCATGCAAGCAATTCAGCAGAGCACGGAGGACGGCAAGAAGGTGATTGATCATGGGTCGCATTTCATGATGGTTGGCGATGATGAGTTCGAGATGAGCTTCACGCCTTGATCGAGACTGGGTCCAGTTCATTGAGTTGGGGTTGGGTACTGATCGAGCTATTCCAAGCCAGCGCATGGTTGCATTTCATTTGCTTGCTTGGGAAATCTGCTGCTTCGTTCAGGGGGCTGAGGATTTAAGTTGCTCAGCAAGTGTAACCATCTATCTTCTTTTCTCAAAAAGAAAAAAAAAGAATCTAACTTATGTGAACAAGAGAATGATTATTTAAGAAAGATTGAGGCACCGTTGACGTCATAACAAAAAAAAAAAAAAAAAACGGTCCGCGGCCACTCGAGTCGA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_13015#0 CCGGAGCGCAGTACGTGACACCCGCACACGAAGCCATGGGACGCCGCGCGCGCGCTCTCC 60
consensus_13015#1 ------------------------------------------------------------
consensus_13015#0 TCCACGCGCCGGCGCCGCTCCTGCTGCTGCTGGCACTGGCCGCCGCGGCGGCGGCGGTCG 120
consensus_13015#1 ------------------------------------------------------------
consensus_13015#0 CCGTGGCGTCGGGCCCGCCCTTCTCCTGCGGCGCGCCGTCCAGCGCGGCGTTCTGCAACC 180
consensus_13015#1 ------------------------------------------------------------
consensus_13015#0 CGAGGCTGCCCATCGAGCAGCGCGCGGACGACCTCGTGTCGAGGCTGACGCTGGAGGAGA 240
consensus_13015#1 ------------------------------------------------------------
consensus_13015#0 AGATCTCGCAGCTCGGGGACCAGTCGCCGGCCGTCGACCGGCTCGGCGTCCCGGCGTACA 300
consensus_13015#1 ------------------------------------------------------------
consensus_13015#0 AGTGGTGGTCGGAGGCGCTCCACGGCGTCTCCAACGCCGGCCGCGGCATCCACCTCGACG 360
consensus_13015#1 ------------------------------------------------------------
consensus_13015#0 GCCCGCTCCGCGCCGCCACCAGCTTCCCGCAGGTCATCCTCACCGCCGCGTCATTCAACC 420
consensus_13015#1 ------------------------------------------------------------
consensus_13015#0 CGCACCTCTGGTACCGTATCGGCCAGGTGATCGGCACGGAGGCGAGGGCGGTGTACAACA 480
consensus_13015#1 ------------------------------------------------------------
consensus_13015#0 ACGGGCAGGCGGAAGGGCTCACGTTCTGGGCGCCAAACATCAACGTGTTCAGGGACCCGA 540
consensus_13015#1 ------------------------------------------------------------
consensus_13015#0 GGTGGGGCCGCGGGCAGGAGACCCCCGGCGAGGACCCCACGGTGACCGGCAAGTACGCCG 600
consensus_13015#1 ------------------------------------------------------------
consensus_13015#0 CCGTGTTCGTCCGCGGCGTCCAGGGCTACGCCCTCGCCGGCGCCATCAACTCCACCGACC 660
consensus_13015#1 ------------------------------------------------------------
consensus_13015#0 TCGAGGCCTCCGCCTGCTGCAAGCACTTCACCGCCTACGACCTCGAGAACTGGAAGGGCG 720
consensus_13015#1 ------------------------------------------------------------
consensus_13015#0 TCACCCGCTACGCCTTCGACGCCAAGGTGACGGCGCAGGACCTGGCCGACACGTACAACC 780
consensus_13015#1 ------------------------------------------------------------
consensus_13015#0 CTCCGTTCAGAAGCTGCGTCGAGGACGGCGGGGCCAGCGGCATCATGTGCTCCTACAACC 840
consensus_13015#1 ------------------------------------------------------------
consensus_13015#0 GCGTCAATGGCGTGCCAACTTGTGCCGATTACAACCTCCTCTCCAAAACTGCAAGGGGAG 900
consensus_13015#1 ------------------------------------------------------------
consensus_13015#0 ATTGGAGGTTTTACGGATATATCACCTCAGATTGTGATGCTGTGTCCATCATCCATGATG 960
consensus_13015#1 ------------------------------------------------------------
consensus_13015#0 TCCAAGGATATGCCAAGACAGCGGAAGATGCAGTTGCAGATGTCCTCAAGGCTGGAATGG 1020
consensus_13015#1 ------------------------------------------------------------
consensus_13015#0 ACGTGAACTGCGGCAGCTACGTGCAGGAACATGGTCTATCTGCAATCCAGCAAGGGAAGA 1080
consensus_13015#1 ------------------------------------------------------------
consensus_13015#0 TCACAGAACAAGACATCAACAGAGCCCTCCACAACCTCTTCGCTGTCAGGATGAGGCTGG 1140
consensus_13015#1 ------------------------------------------------------------
consensus_13015#0 GGCTCTTCAACGGCAACCCAAAGTACAACCGCTACGGTAACATTGGCCCAGACCAGGTGT 1200
consensus_13015#1 ------------------------------------------------------------
consensus_13015#0 GCACGCAGGAGCACCAAAACCTTGCCCTTGAAGCAGCACAACATGGCGTTGTCCTACTGA 1260
consensus_13015#1 ------------------------------------------------------------
consensus_13015#0 AGAACGACGCCAATGCTCTCCCCCTGTCCAAATCACAAGTCTCATCCATTGCTGTCATTG 1320
consensus_13015#1 ------------------------------------------------------------
consensus_13015#0 GGCACAACGCAAATGACGCCACGAGATTGCTTGGGAATTACTTCGGCCCTCCTTGCATAT 1380
consensus_13015#1 ------------------------------------------------------------
consensus_13015#0 CGGTGACTCCTCTCCAAGTGCTGCAAGGCTATGTGAAGGACACCAGGTTCCTAGCTGGGT 1440
consensus_13015#1 ------------------------------------------------------------
consensus_13015#0 GCAACTCGGCTGCCTGCAATGTGTCATCAATTGGTGAAGCGGCGCAATTGGCAAGTTCAG 1500
consensus_13015#1 ------------------------------------------------------------
consensus_13015#0 TGGACTACGTTGTGCTGTTCATGGGATTAGACCAAGATCAGGAGAGGGAAGAGGTTGATA 1560
consensus_13015#1 ------------------------------------------------------------
consensus_13015#0 GGCTGGAACTGTCGCCCCCAGGAATGCAGGAGAACCTCACCAACACGGTCGCTAACGCGG 1620
consensus_13015#1 ------------------------------------------------------------
consensus_13015#0 CAAAGAAGCCGGTGATCTTGGTGCTACTGTGTGGTGGTCCAGTGGATGTGACCTTTGCTA 1680
consensus_13015#1 ------------------------------------------------------------
consensus_13015#0 AGTATAATCCCAAGATTGGGGCCATCCTGTGGGCTGGTTACCCTGGCGAGGCTGGAGGGA 1740
consensus_13015#1 ------------------------------------------------------------
consensus_13015#0 TTGCGATTGCTCAGGTCCTCTTTGGAGAGCACAACCCTGGTGGAAGGCTGCCAGTGACCT 1800
consensus_13015#1 ------------------------------------------------------------
consensus_13015#0 GGTATCCAAAGGAGTTCACGAGCGTGCCCATGACAGATATGCGGATGCGTGCCGATCCAT 1860
consensus_13015#1 ------------------------------------------------------------
consensus_13015#0 CCACGGGATATCCCGGACGAACGTACAGGTTCTACCGAGGCAACACCGTCTACAAGTTCG 1920
consensus_13015#1 ------------------------------------------------------------
consensus_13015#0 GCTACGGCCTCAGCTACTCGAAGTACTCTCACCACTTCGTCGCAAACGGCACGAAGCTGC 1980
consensus_13015#1 ------------------------------------------------------------
consensus_13015#0 CGTCTTTGAGCAGCATCGATGGCCTGAAGGCGATGGCGACAGCAGCTGCAGGCACGGTGA 2040
consensus_13015#1 -------GGNCAATACCNT--ATTAAGGGACCAAGCTGGAGTCAACCG--GGTGCGGC-- 47
* ** * * * * * * * ** * * ** ***
consensus_13015#0 GCTATGACGTCGAAGAGATTGGCCCCGAGACGTGTGACAAGCTCAAGTTCCCGGCGCTCG 2100
consensus_13015#1 -CGNTNGAGTTAACGCGTTT----TCGAAACGTGTAACGAGCTTAAGTTCCGGGGGTTTG 102
* * ** * * * ** *** ****** ** **** ******* ** * * *
consensus_13015#0 TCAGGGTGCAGAACCATGGCCCCATGGACGGCAGGCACCCCGTGCTGCTCTTCCTGCGCT 2160
consensus_13015#1 TCAGGGTGCAGAACCATGGCCCCATGNACGGCAGGCAACCCGTGCTGNTCTTCGTGGGGT 162
************************** ********** ********* ***** ** * *
consensus_13015#0 GGCCGAACGGCGCGGCGGACGGCGGCAGGCCGGCGAGCCAGCTGATCGGCTTCCAGAGCC 2220
consensus_13015#1 GGCCGAAAGGCCGGGCGGACGGAGGCAGGCCGGCGAGCNAGCTGATCGGNTTCCAGAGCC 222
******* *** ********* *************** ********** **********
consensus_13015#0 TGCACCTCAAGTCGATGCAGACTGTCCATGTGGAGTTCGAGGTGAGCCCATGCAAGCACT 2280
consensus_13015#1 TGCACCTCAAGTCGATGCAGACTGTCCATGTGGAGTTCGAGGTGAGCCCATGCAAGCAAT 282
********************************************************** *
consensus_13015#0 TCAGCAGAGCGACGGAGGACGGCAAGAAGGTGATTGATCATGGGTCGCATTTCATGATGG 2340
consensus_13015#1 TCAGCAGAGC-ACGGAGGACGGCAAGAAGGTGATTGATCATGGGTCGCATTTCATGATGG 341
********** *************************************************
consensus_13015#0 TTGGCGATGATGAGTTCGAGATGAGCTTCACGCCTTGATCGAG-CTGGGTCCAGTTCATT 2399
consensus_13015#1 TTGGCGATGATGAGTTCGAGATGAGCTTCACGCCTTGATCGAGACTGGGTCCAGTTCATT 401
******************************************* ****************
consensus_13015#0 GAGTTGGGGTTGGGTACTGATCGAGCTATTCCAAGCCAGCGCATGGTTGCATTTCATTTG 2459
consensus_13015#1 GAGTTGGGGTTGGGTACTGATCGAGCTATTCCAAGCCAGCGCATGGTTGCATTTCATTTG 461
************************************************************
consensus_13015#0 CTTGCTTGGGAAATCTGCTGCTTCGTTCAGGGGGCTGAGGATTTAAGTTGCTCAGCAAGT 2519
consensus_13015#1 CTTGCTTGGGAAATCTGCTGCTTCGTTCAGGGGGCTGAGGATTTAAGTTGCTCAGCAAGT 521
************************************************************
consensus_13015#0 GTAACCATCTATCTTCTTTTCTCAAAAAGAAAAAAAAAGAATCTAACTTATGTGAACAAG 2579
consensus_13015#1 GTAACCATCTATCTTCTTTTCTCAAAAAGAAAAAAAAAGAATCTAACTTATGTGAACAAG 581
************************************************************
consensus_13015#0 AGAATGATTATTTAAGAAAGATTGAGGCAC------------AAAAAAAAAAAGA----- 2622
consensus_13015#1 AGAATGATTATTTAAGAAAGATTGAGGCACCGTTGACGTCATAACAAAAAAAAAAAAAAA 641
****************************** ** ******** *
consensus_13015#0 --------------------------
consensus_13015#1 AAACGGTCCGCGGCCACTCGAGTCGA 667
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||