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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13234#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1742 fasta sequence
[GCCCAAGGGCCCGAATTGGCAGCCCAACGACGGCGACGGCGGCGGCGACGACGACGGCGATGGCGGCGGCGGCGGTAACGGTCAAGCTCGGAGGGTGGAGTAGTTACTGTTACTGCCCTACCACCACGAGGAGGAGCAAACCGGCGGCGGTGAAGATGATGATGGCGCTTTGCCCTACCAGCTTCCGGATCGAATTGCCTCGACGAACCATTCGGGCTGCCATACTGAACAAGAGACACACCGTTCCTTGCTACCAGAGGCAAGAAGGAGCTTCATCTCCAGCTCCGCAGATCGAAGCCAAGTCAATGGAGGAGGTATATGATGCTTTGGCTGAGCACCTTTTTTCTGTTTTGAAGAACATTGAACATCTTGACTCAAAATACATTGTTGGTATAGCTGGACCACCTGGCGCGGGAAAGTCTACAGTTGCTTCCGAAGTTGTTCAACGTGTTAATAAACGCTGGTCCCAGAAGCACGAGAATGGTAGTTCACTTATTTCAACCGAAGAAATTGCCACGATGCTTCCCATGGATGGTTTCCACCTTTATCGGTCCCAACTAGATGCAATGGAGGATCCAAAAGAAGCACATGCAAGAAGAGGAGCACCATGGACATTCGATCCATCCCGGTTTTTGAAATGCCTACAGACCCTGAGAGAAGAGGGTTCAGTTTATGCTCCATCATTTGATCATGGTGTTGGTGATCCAGTTGAAAATGACATATTCGTAAAGCCGCAGTGAGTTATCATTGCAGATCCAGAATATATTCTCTTTGTAGATTGCAGAATGCTTGAACTCTAGTTTCTTATTTCGATTTAAATCAAATGTGAAGCATGCCTGAGTTATTCATATAGTTAGTTCAGATGCTGAACACACTGGCCTTTATAGAACCTTTTAGACCAACTCACTTTTAGCATTACCTAACACTGGAACCTTATGCTGTTATTATGCTGTGTGGAATGATCATATTCTATCAGGCACTGCCAAGTTCTAATTAATCTTTTTTTAATGAATACCTGTGTTTGGAACTTTGTATGCCTGTATGCGGTATGTGAATAGCCGCAAGCAGATACCTTTATGAGAAGTTTTGTTTTATGCTTTATCTTTCTAACAGATTATGGCTCTCGCACCAAAAATGGTTTATTTTAAACAAGCCAGGTAATTTACCCTAAGTATGTTCAGCACATGCTGGTTACTAATTACTATGATTTTGGCAGACACAAAATAGTGATTGTCGAAGGCAATTATCTATTACTGGAAGAAGATGCCTGGAGGGACATTAGAGCCTTGTTTGATGAAAAATGGTTTATCGATATTGACATTGATGTCTCCATGCAAAGAGTGCTCCAGAGACATGTCGCCACAGGAAAAGAGCCAGATGTAGCAGCATGGCGGATCTCGTATAATGACCGGCCAAACGCAGAGCTTATCATGAAGTCAAAAAAGTCTGCAGATCTTGTAATCAGATCGGTGGATTTGTCAAGATAAGAGTCCATGTCTTCAATTGCTGATTAGATATCTGCTCTAATAATGTTCAGAGAAAGACACTACCAATGGTTGTTTCCATGGAGATCTTTGTACATATAATAAGCTCAATGCATCTCTCCATGGTGATTTTTGTAGATCAAATAAACTTATCCCCAACCAGTTTGGTTGTACAGTCGATGATGAATAACTTATTCAACACCATTTTTGGCAATTTTCCTACTCTTGAAGAATATGTTTCCAACATCAACTAAAAAA]
[+] EMBL AK073304 [GCCCAAGGGCCCGAATTGGCAGCCCAACGACGGCGACGGCGGCGGCGACGACGACGGCGATGGCGGCGGCGGCGGTAACGGTCAAGCTCGGAGGGTGGAGTAGTTACTGTTACTGCCCTACCACCACGAGGAGGAGCAAACCGGCGGCGGTGAAGATGATGATGGCGCTTTGCCCTACCAGCTTCCGGATCGAATTGCCTCGACGAACCATTCGGGCTGCCATACTGAACAAGAGACACACCGTTCCTTGCTACCAGAGGCAAGAAGGAGCTTCATCTCCAGCTCCGCAGATCGAAGCCAAGTCAATGGAGGAGGTATATGATGCTTTGGCTGAGCACCTTTTTTCTGTTTTGAAGAACATTGAACATCTTGACTCAAAATACATTGTTGGTATAGCTGGACCACCTGGCGCGGGAAAGTCTACAGTTGCTTCCGAAGTTGTTCAACGTGTTAATAAACGCTGGTCCCAGAAGCACGAGAATGGTAGTTCACTTATTTCAACCGAAGAAATTGCCACGATGCTTCCCATGGATGGTTTCCACCTTTATCGGTCCCAACTAGATGCAATGGAGGATCCAAAAGAAGCACATGCAAGAAGAGGAGCACCATGGACATTCGATCCATCCCGGTTTTTGAAATGCCTACAGACCCTGAGAGAAGAGGGTTCAGTTTATGCTCCATCATTTGATCATGGTGTTGGTGATCCAGTTGAAAATGACATATTCGTAAAGCCGCAGTGAGTTATCATTGCAGATCCAGAATATATTCTCTTTGTAGATTGCAGAATGCTTGAACTCTAGTTTCTTATTTCGATTTAAATCAAATGTGAAGCATGCCTGAGTTATTCATATAGTTAGTTCAGATGCTGAACACACTGGCCTTTATAGAACCTTTTAGACCAACTCACTTTTAGCATTACCTAACACTGGAACCTTATGCTGTTATTATGCTGTGTGGAATGATCATATTCTATCAGGCACTGCCAAGTTCTAATTAATCTTTTTTTAATGAATACCTGTGTTTGGAACTTTGTATGCCTGTATGCGGTATGTGAATAGCCGCAAGCAGATACCTTTATGAGAAGTTTTGTTTTATGCTTTATCTTTCTAACAGATTATGGCTCTCGCACCAAAAATGGTTTATTTTAAACAAGCCAGGTAATTTACCCTAAGTATGTTCAGCACATGCTGGTTACTAATTACTATGATTTTGGCAGACACAAAATAGTGATTGTCGAAGGCAATTATCTATTACTGGAAGAAGATGCCTGGAGGGACATTAGAGCCTTGTTTGATGAAAAATGGTTTATCGATATTGACATTGATGTCTCCATGCAAAGAGTGCTCCAGAGACATGTCGCCACAGGAAAAGAGCCAGATGTAGCAGCATGGCGGATCTCGTATAATGACCGGCCAAACGCAGAGCTTATCATGAAGTCAAAAAAGTCTGCAGATCTTGTAATCAGATCGGTGGATTTGTCAAGATAAGAGTCCATGTCTTCAATTGCTGATTAGATATCTGCTCTAATAATGTTCAGAGAAAGACACTACCAATGGTTGTTTCCATGGAGATCTTTGTACATATAATAAGCTCAATGCATCTCTCCATGGTGATTTTTTTAGATCAAATAAACTTATCCCCAACCAGTTTGGTTGTACAGTCGATGATGAATAA ]
[+] EMBL CF303499 [ TTCGATCCATCCCGCTTTTTGAAATGCCTACAGACCCTGAGAGAAGAGGGTTCAGTTTATGCTCCATCATTTGATCATGGTGTTGGTGATCCAGTTGAAAATGACATATTTGTAAAGCCGCAGTGAGTTATCATTGCAGAACCA TANATATTCTCTTTGTAGATTGCAGAATGCTTGAACTCTAGTTTCTTATTTCGATTTAAATCAAATGTGAAGCATGCCTGAGTTATTCATATAGTTAGTTCAGATGCTGAACACACTGGCCTTTATAGAACCTTTTAGACCAACTCACTTTTAGCATTACCTAACACTGGAACCTTATGCTGTTATTATGCTGTGTGGAATGATCATATTCTATCAGGCACTGCCAAGTTCTAATTAATCTTTTTTTAATGAATACCTGTGTTTGGAACTTTGTATGCCTGTATGCGGTATGTGAATAGCCGTAAGCAGATACCTTTATGAGAAGTTCTGTTTTATGCTTTATCTTTCTGACAGATTATGGCTCTCGCAC ]
[-] EMBL CB669253 [ TTATTTTAACCAAGCCAGGTAATTTCCCCTAAGTATGTTCAGCCCATGCTGGTTACTAATTACTAGGATTTTGGCAGACCCAAAATAGTGATTGTCGAAGGCAATTATTTATTTCTGGAAGAAGATGCCTGGAGGGACATTAGAGCCTTGTTTGATGAAAAATGGTTTATCGATATTGACATGGATGTCTCCATGCAAAGAGTGCTCCAGAGACATGTCCCCCCAGGAAAAGAGCCAGATGTAGCACCATGGCGGATTTCGTATAATGCCCGGCCAACCGCGGAGCTTATCATGAAGTCAAAAAAGTCGGCAGATCTTGTAATCAGATCGGGGGATTTGTCAAGATAAGAGTCCATGTCTTCAATTGGTGATTAGATATCTGCTTTAATAATGTTCAGAGAAAGCCACTACCAATGGTTGTTTCCATGGAGATCTTTGTACATATAATAAGCTCAATGCATTTCTCCATGGGGATTTTTGTAGATCAAATAAACTTATCCCCAACCAGTTTGGTTGTCCAGTCGATGAGGAATAACTTATTCAACACCATTTTTGG ]
[+] EMBL AU173172 [ TATTGACATTGATGTCTCCATGCAAAGAGTGCTCCAGAGACATGTCGCCACAGGAAAAGAGCCAGATGTAGCAGCATGGCGGATCTCGTATAATGACCGGCCAAACGCAGAGCTTATCATGAAGTCAAAAAAGTCTGCAGATCTTGTAATCAGATCGGTGGATTTGTCAAGATAAGAGTCCATGTCTTCAATTGCTGATTAGATATCTGCTCTAATAATGTTCAGAGAAAGACACTACCAATGGTTGTTTCCATGGAGATCTTTGTACATATAATAAGCTCAATGCATCTCTCCATGGTGATTTTTGTAGATCAAATAAACTTATCCCCAACCAGTTTGGTTGTACAGTCGATGATGAATAACTTATTCAACAACATTCTCTGCAATTTTCCTACTCTTGAAGAATATGTTTCCAACATCAACTAAAAAA]
consensusID : consensus_13234#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1241 fasta sequence
[TGAATCCCCACCCGTTTAGCAAATAAAAAAAATCCCAAAAGCCCAAGGGCCCGAATTGGCAGCCCAACGACGGCGACGGCGGCGGCGACGACGACGGCGATGGCGGCGGCGGCGGTAACGGTCAAGCTCGGAGGGTGGAGTAGTTACTGTTACTGCCCTACCACCACGAGGAGGAGCAAACCGGCGGCGGTGAAGATGATGATGGCGCTTTGCCCTACCAGCTTCCGGATCGAATTGCCTCGACGAACCATTCGGGCTGCCATACTGAACAAGAGACACACCGTTCCTTGCTACCAGAGGCAAGAAGGAGCTTCATCTCCAGCTCCGCAGATCGAAGCCAAGTCAATGGAGGAGGTATATGATGCTTTGGC-TGAGCACCTTTTTTCTGTTTTGAA-GAACA-TTG-AACATCTTGACTCAAAATACATTGTTGGTA-TAGCTGGACCACCTGGCGCGGGAAAGTCTACAGTTGCTTCCGAAGTTGTTCAACGTGTTAATAAACGCTGGTCCCAGAAGCACGAGAATGGTAGTTCACTTATTTCAACCGAAGAAATTGCCACGATGCTTCCCATGGATGGTTTCCACCTTTATCGGTCCCAACTAGATGCAATGGAGGATCCAAAAGAAGCACATGCAAGAAGAGGAGCACCATGGACATTCGATCCATCCCGGTTTTTGAAATGCCTACAGACCCTGAGAGAAGAGGGTTCAGTTTATGCTCCATCATTTGATCATGGTGTTGGTGATCCAGTTGAAAATGACATATTTGTAAAGCCGCAACACAAAATAGTGATTGTCGAAGGCAATTATCTATTACTGGAAGAAGATGCCTGGAGGGACATTAGAGCCTTGTTTGATGAAAAATGGTTTATCGATATTGACATTGATGTCTCCATGCAAAGAGTGCTCCAGAGACATGTCGCCACAGGAAAAGAGCCAGATGTAGCAGCATGGCGGATCTCGTATAATGACCGGCCAAACGCAGAGCTTATCATGAAGTCAAAAAAGTCTGCAGATCTTGTAATCAGATCGGTGGATTTGTCAAGATAAGAGTCCATGTCTTCAATTGCTGATTAGATATCTGCTCTAATAATGTTCAGAGAAAGACACTACCAATGGTTGTTTCCATGGAGATCTTTGTACATATAATAAGCTCAATGCATCTCTCCATGGTGATTTTTGTAGATCAAATAAACTTATCCCCAACCAGTTTGGTTGTACAGTCGATGATGAATAACTTAAAA]
[+] EMBL AK059928 [TGAATCCCCACCCGTTTAGCAAATAAAAAAAATCCCAAAAGCCCAAGGGCCCGAATTGGCAGCCCAACGACGGCGACGGCGGCGGCGACGACGACGGCGATGGCGGCGGCGGCGGTAACGGTCAAGCTCGGAGGGTGGAGTAGTTACTGTTACTGCCCTACCACCACGAGGAGGAGCAAACCGGCGGCGGTGAAGATGATGATGGCGCTTTGCCCTACCAGCTTCCGGATCGAATTGCCTCGACGAACCATTCGGGCTGCCATACTGAACAAGAGACACACCGTTCCTTGCTACCAGAGGCAAGAAGGAGCTTCATCTCCAGCTCCGCAGATCGAAGCCAAGTCAATGGAGGAGGTATATGATGCTTTGGC TGAGCACCTTTTTTCTGTTTTGAA GAACA TTG AACATCTTGACTCAAAATACATTGTTGGTA TAGCTGGACCACCTGGCGCGGGAAAGTCTACAGTTGCTTCCGAAGTTGTTCAACGTGTTAATAAACGCTGGTCCCAGAAGCACGAGAATGGTAGTTCACTTATTTCAACCGAAGAAATTGCCACGATGCTTCCCATGGATGGTTTCCACCTTTATCGGTCCCAACTAGATGCAATGGAGGATCCAAAAGAAGCACATGCAAGAAGAGGAGCACCATGGACATTCGATCCATCCCGGTTTTTGAAATGCCTACAGACCCTGAGAGAAGAGGGTTCAGTTTATGCTCCATCATTTGATCATGGTGTTGGTGATCCAGTTGAAAATGACATATTTGTAAAGCCGCAACACAAAATAGTGATTGTCGAAGGCAATTATCTATTACTGGAAGAAGATGCCTGGAGGGACATTAGAGCCTTGTTTGATGAAAAATGGTTTATCGATATTGACATTGATGTCTCCATGCAAAGAGTGCTCCAGAGACATGTCGCCACAGGAAAAGAGCCAGATGTAGCAGCATGGCGGATCTCGTATAATGACCGGCCAAACGCAGAGCTTATCATGAAGTCAAAAAAGTCTGCAGATCTTGTAATCAGATCGGTGGATTTGTCAAGATAAGAGTCCATGTCTTCAATTGCTGATTAGATATCTGCTCTAATAATGTTCAGAGAAAGACACTACCAATGGTTGTTTCCATGGAGATCTTTGTACATATAATAAGCTCAATGCATCTCTCCATGGTGATTTTTGTAGATCAAATAAACTTATCCCCAACCAGTTTGGTTGTACAGTCGATGATGAATAACTT ]
[+] EMBL CF311423 [ GCCC AGGGCCCGAATTGGCAGCCCAACGACGGCGACGGCGGCGGCGACGACGACGGCGATGGCGGCGGCGGCGGTAACGGTCAAGCTCGGAGGGTGGAGTAGTTACTGTTACTGCCCTACCACCACGAGGAGGAGCAAACCGGCGGCGGTGAAGATGATGATGGCGCTTTGCCCTACCAGCTTCCGGATCGAATTGCCTCGACGAACCATTCGGGCTGCCATACTGAACAAGAGACACACCGTTCCTTGCTACCAGAGGCAAGAAGGAGCTTCATCTCCAGCTCCGCAGATCGAAGCCAAGTCAATGGAGGAGGTATATGATGCTTTGGC TGAGCACCTTTTTTCTGTTTTGAA GAACA TTG AACATCTTGACTCAAAATACATTGTTGGTA TAGCTGGACCACCTGGCGCGGGAAAGTCTACAGTTGCTTCCGAAGTTGTTCAACGTGTTAATAAACGCTGGTCCCAGAAGCACGAGAATGGTAGTTCACTTATTTCAACCGAAGAAATTGCCACGATGCTTCCCATGGATGGTTTCCACCTTTATCGGTCCCAACTAGATGCAATGGAGGATCCAAAAGAAGCACATGCAAGAAGAGGAGCACCATGGACA ]
[+] EMBL AU068163 [ CAAGGGCCCGAATTGGCAGCCCAACGACGGCGACGGCGGCGGCGACGACGACGGCGATGGCGGCGGCGGCGGTAACGGTCAAGCTCGGAGGGTGGAGTAGTTACTGTTACTGCCCTACCACCACGAGGAGGAGCAAACCGGCGGCGGTGAAGATGATGATGGCGCTTTGCCCTACCAGCTTCCGGATCGAATTGCCTCGACGAACCATTCGGGCTGCCATACTGAACAAGAGACACACCGTTCCTTGCTACCAGAGGCAAGAAGGAGCTTCATCTCCAGCTCCGCAGATCGAAGCCAAGTCAATGGAGGAGGTATATGATGCTTTGGCTTGAGCACCTTTTTTCTGTTTTNAAGGANCATTTGAAACATCTTGACTCAAAATACATTGTTGGTATTAGCTGGACCACCTGGCGCGGGga ]
[+] EMBL CF323807 [ GCAGCCCAACGACGGCGACGGCGGCGGCGACGACGACGGCGATGGCGGCGGCGGCGGTAACGGTCAAGCTCGGAGGGTGGAGTAGTTACTGTTACTGCCCTACCACCACGAGGAGGAGCAAACCGGCGGCGGTGAAGATGATGATGGCGCTTTGCCCTACCAGCTTCCGGATCGAATTGCCTCGACGAACCATTCGGGCTGCCATACTGAACAAGAGACACACCGTTCCTTGCTACCAGAGGCAAGAAGGAGCTTCATCTCCAGCTCCGCAGATCGAAGCCAAGTCAATGGAGGAGGTATATGATGCTTTGGC TGAGCACCTTTTTTCTGTTTTGAA GAACA TTG AACATCTTGACTCAAAATACATTGTTGGTA TAGCTGGACCACCTGGCGCGGGAAAGTCTACAGTTGCTTCCGAAGTTGTTCAACGTGTTAATAAACGCTGGTCCCAGAAGCACGAGAATGGTAGTTCACTTATTTCAACCGAAGAAATTGCCACGATGCTTCCCATGGATGGTTTCCACCTTTAT ]
[-] EMBL CF311424 [ TTTTGAAATGCCTACAGACCCTGAGAGAAGAGGGTTCAGTTTATGCTCCATCATTTGATCATGGTGTTGGTGATCCAGTTGAAAATGACATATTTGTAAAGCCGCAACACAAAATAGTGATTGTCGAAGGCAATTATCTATTACTGGAAGTAGATGCCTGGAGGGACATTAGAGCCTTGTTTGATGAAAAATGGTTTATCGATATTGACATTGATGTCTCCATGCAAAGAGTGCTCCAGAGACATGTCGCCACAGGAAAAGAGCCAGATGTAGCAGCATGGCGGATCTCGTATAATGACCGGCCAAACGCAGAGCTTATCATGAAGTCAAAAAAGTCTGCAGATCTTGTAATCAGATCGGTGGATTTGTCAAGATAAGAGTTCATGTCTTCAATTGCTGATTAGATATCTGCTCTAATAATGTTCAGAGAAAGACACTACCAATGGTTGTTTCCATGGAGATCTTTGTACATATAATAAGCTCAATGCATCTCTCCATGGTGATTTTTGTAGATCAAATAAACTTATCCCCAACCAGTTTGGTTGTACAGTCGATGATGAATAAAAAAAAA]
consensusID : consensus_13234#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 691 fasta sequence
[TGCCTGGTATGCGGTATGTGAATAGCCGCAAGCAGATACCTTTATGAGAAGTTTTGTTTTATGCTTTATCTTTCTAACCAGATTATGGCTCTCGCACCAAAAATGGTTTATTTTAAACAAGCCAGGTAATTTACCCTAAGTATGTTCAGCACATGCTGGTTACTAATTACTATGATTTTGGCAGACACAAAATAGTGATTGTCGAAGGCAATTATCTATTACTGGAAGAAGATGCCTGGAGGGACATTAGAGCCTTGTTTGATGAAAAATGGTTTATCGATATTGACATTGATGTCTCCATGCAAAGAGTGCTCCAGAGACATGTCGCCACAGGAAAAGAGCCAGATGTAGCAGCATGGCGGATCTCGTATAATGACCGGCCAAACGCAGAGCTTATCATGAAGTCAAAAAAGTCTGCAGATCTTGTAATCAGATCGGTGGATTTGTCAAGATAAGAGTCCATGTCTTCAATTGCTGATTAGATATCTGCTCTAATAATGTTCAGAGAAAGACACTACCAATGGTTGTTTCCATGGAGATCTTTGTACATATAATAAGCTCAATGCATCTCTCCATGGTGATTTTTGTAGATCAAATAAACTTATCCCCAACCAGTTTGGTTGTACAGTCGATGATGAATAACTTATTCAACAACATTCTCTGCAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL AU068162 [TGCCTGGTATGCGGTATGTGAATAGCCGCAAGCAGATACCTTTATGAGAAGTTTTGTTTTATGCTTTATCTTTCTAACCAGATTATGGCTCTCGCACCAAAAATGGTTTATTTTAAACAAGCCAGGTAATTTACCCTAAGTATGTTCAGCACATGCTGGTTACTAATTACTATGATTTTGGCAGACACAAAATAGTGATTGTCGAAGGCAATTATCTATTACTGGAAGAAGATGCCTGGAGGGACATTAGAGCCTTGTTTGATGAAAAATGGTTTATCGATATTGACATTGATGTCTCCATGCAAAGAGTGCTCCAGAGACATGTCGCCACAGGAAAAGAGCCAGATGTAGCAGCATGGCGGATCTCGTATAATGACCGGCCAAACGCAGAGCTTATCATGAAGTCAAAAAAGTCTGCAGATCTTGTAATCAGATCGGTGGATTTGTCAAGATAAGAGTCCATGTCTTCAATTGCTGATTAGATATCTGCTCTAATAATGTTCAGAGAAAGACACTACCAATGGTTGTTTCCATGGAGATCTTTGTACATATAATAAGCTCAATGCATCTCTCCATGGTGATTTTTGTAGATCAAATAAACTTATCCCCAACCAGTTTGGTTGTACAGTCGATGATGAATAACTTATTCAACAACATTCTCTGCAAAAAAAAAAAAAAAAAAAAAAAAAAA]
consensusID : consensus_13234#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 690 fasta sequence
[ATTGGCAGCCCAACGACGNCGACGNCGNCGNCGACGACGACGNCGANTGGCGNCGGCGNCGNTAACGGTCAAGCTCGGAGGGTGGAGTAGTTACTGTTACTNNCCTACCACCACGAGGAGGAGCAAACCGNCGNCGNTGAAGATGATGATGGCGCTTTGCCCTACCANCTTCCGGATCGAATTGCCTCGACGAACCATTCGGGCTGNCATANTGAACAAGAGACACACCGTTCCTTGCTACCAGAGGCAAGAAGGAGCTTCATCTCCAGCTCCGCAGATCGAAGCCAAGTCAATGGAGGAGGTATATGATGCTTTGGCTGAGCACCTTTTTTCTGTTTTGAAGAACATTGAACATCTTGACTCAAAATACATTGTTGGTATAGCTGGACCACCTGGCGCGGGAAAGTCTACAGTTGCTTCCGAAGTTGTTCAACGTGTTAATAAACGCTGGTCCCAGAAGCACGAGAATGGTAGTTCACTTATTTCAACCGAAGAAATTGCCACGATGCTTCCCATGGATGGTTTCCACCTTTATCGGTCCCAACTAGATGCAATGGAGGATCCAAAAGAAGCACATGCAAGAAGAGGAGCACCATGGACATTCGATCCATCCCGGTTTTTGAAATGCCTACAGACCCTGNNNNNNNNNNGTTCAGTTTATGCTCCATCATTTGATCATGNNNNTGGTGA]
[+] EMBL OSR15731B [ATTGGCAGCCCAACGACGNCGACGNCGNCGNCGACGACGACGNCGANTGGCGNCGGCGNCGNTAACGGTCAAGCTCGGAGGGTGGAGTAGTTACTGTTACTNNCCTACCACCACGAGGAGGAGCAAACCGNCGNCGNTGAAGATGATGATGGCGCTTTGCCCTACCANCTTCCGGATCGAATTGCCTCGACGAACCATTCGGGCTGNCATANTGAACAA ]
[+] EMBL CF196666 [ CTTCCGGATCGAATTGCCTCGACGAACCATTCGGGCTGCCATACTGAACAAGAGACACACCGTTCCTTGCTACCAGAGGCAAGAAGGAGCTTCATCTCCAGCTCCGCAGATCGAAGCCAAGTCAATGGAGGAGGTATATGATGCTTTGGCTGAGCACCTTTTTTCTGTTTTGAAGAACATTGAACATCTTGACTCAAAATACATTGTTGGTATAGCTGGACCACCTGGCGCGGGAAAGTCTACAGTTGCTTCCGAAGTTGTTCAACGTGTTAATAAACGCTGGTCCCAGAAGCACGAGAATGGTAGTTCACTTATTTCAACCGAAGAAATTGCCACGATGCTTCCCATGGATGGTTTCCACCTTTATCGGTCCCAACTAGATGCAATGGAGGATCCAAAAGAAGCACATGCAAGAAGAGGAGCACCATGGACATTCGATCCATCCCGGTTTTTGAAATGCCTACAGACCCTGNNNNNNNNNNGTTCAGTTTATGCTCCATCATTTGATCATGNNNNTGGTGA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_13234#1 TGAATCCCCACCCGTTTAGCAAATAAAAAAAATCCCAAAAGCCCAAGGGCCCGAATTGGC 60
consensus_13234#3 ------------------------------------------------------ATTGGC 6
consensus_13234#0 ----------------------------------------GCCCAAGGGCCCGAATTGGC 20
consensus_13234#2 ------------------------------------------------------------
consensus_13234#1 AGCCCAACGACGGCGACGGCGGCGGCGACGACGACGGCGAT-GGCGGCGGCGGCGGTAAC 119
consensus_13234#3 AGCCCAACGACGNCGACGNCGNCGNCGACGACGACGNCGANTGGCGNCGGCGNCGNTAAC 66
consensus_13234#0 AGCCCAACGACGGCGACGGCGGCGGCGACGACGACGGCGAT-GGCGGCGGCGGCGGTAAC 79
consensus_13234#2 --------------TGCCTGGTATGCGGT-ATGTGAATAGCCGCAAGCAGATACCTTTAT 45
* * ** * * * * * * * *
consensus_13234#1 GGTCAAGCTCGGAGGGTGGAGTAGTTACTGTTACTGCCCTACCACCACGAGGAGGAGCAA 179
consensus_13234#3 GGTCAAGCTCGGAGGGTGGAGTAGTTACTGTTACTNNCCTACCACCACGAGGAGGAGCAA 126
consensus_13234#0 GGTCAAGCTCGGAGGGTGGAGTAGTTACTGTTACTGCCCTACCACCACGAGGAGGAGCAA 139
consensus_13234#2 GAGAAGTTTTGTTTTATGCTTTA-TCTTTCTAACCAGATTATGGCTCTCGCACCAA--AA 102
* * * * ** ** * * * ** ** * * **
consensus_13234#1 ACCGGCGGCGGTGAAGATGATGATGGCGCTTTGCCCTACCAGCTTCCGGATCGAATTGCC 239
consensus_13234#3 ACCGNCGNCGNTGAAGATGATGATGGCGCTTTGCCCTACCANCTTCCGGATCGAATTGCC 186
consensus_13234#0 ACCGGCGGCGGTGAAGATGATGATGGCGCTTTGCCCTACCAGCTTCCGGATCGAATTGCC 199
consensus_13234#2 ATGGTTTATTTTAAACAAGCCA--GGTAATTTACCCTAAGTATGTTCAGCACATGCTGGT 160
* * * ** * * ** *** ***** * * * * **
consensus_13234#1 TCGACGAACCATTCGGGCT--GCCATACTGAACAAGAGACACACCGTTCCTTGCTACCAG 297
consensus_13234#3 TCGACGAACCATTCGGGCT--GNCATANTGAACAAGAGACACACCGTTCCTTGCTACCAG 244
consensus_13234#0 TCGACGAACCATTCGGGCT--GCCATACTGAACAAGAGACACACCGTTCCTTGCTACCAG 257
consensus_13234#2 T--ACTAATTACTATGATTTTGGCAGACACAAAATAGTGATTGTCGAAGGCAATTATCTA 218
* ** ** * * * * * ** * ** * ** ** *
consensus_13234#1 AGGCAAGAAGGAGCTTCATCTCCAGCTCCGCAGATCGAAGCCAAGTC-AATGGAGGA-GG 355
consensus_13234#3 AGGCAAGAAGGAGCTTCATCTCCAGCTCCGCAGATCGAAGCCAAGTC-AATGGAGGA-GG 302
consensus_13234#0 AGGCAAGAAGGAGCTTCATCTCCAGCTCCGCAGATCGAAGCCAAGTC-AATGGAGGA-GG 315
consensus_13234#2 TTACTGGAAGAAGATGC--CTGGAG----GGACATTAGAGCCTTGTTTGATGAAAAATGG 272
* **** ** * * ** ** * * ** **** ** *** * * **
consensus_13234#1 TATAT-GATGCTTTGGCTGAGCACCTTTTTTCTGTTTTGAAGAACATTGA-ACATCTTGA 413
consensus_13234#3 TATAT-GATGCTTTGGCTGAGCACCTTTTTTCTGTTTTGAAGAACATTGA-ACATCTTGA 360
consensus_13234#0 TATAT-GATGCTTTGGCTGAGCACCTTTTTTCTGTTTTGAAGAACATTGA-ACATCTTGA 373
consensus_13234#2 TTTATCGATATTGACATTGA----TGTCTCCATGCAAAGAGTGCTCCAGAGACATGTCGC 328
* *** *** * *** * * ** ** ** **** * *
consensus_13234#1 CTCAAAATACATTGTTGGTATAGCTGGACCACCTGGCGCGGGAAAGTCTACAGTTGCTTC 473
consensus_13234#3 CTCAAAATACATTGTTGGTATAGCTGGACCACCTGGCGCGGGAAAGTCTACAGTTGCTTC 420
consensus_13234#0 CTCAAAATACATTGTTGGTATAGCTGGACCACCTGGCGCGGGAAAGTCTACAGTTGCTTC 433
consensus_13234#2 CACAGGAAAAGAGCCAGATGTAGCAGCATGGCG-GATCTCGTATAATGACCGGCCAAACG 387
* ** * * * * **** * * * * * * * * * *
consensus_13234#1 CGAAGTTGTTCAACGTGTTAATAAACGCTGGTCCCAGAAGCACGAGAATGGTAGTTCACT 533
consensus_13234#3 CGAAGTTGTTCAACGTGTTAATAAACGCTGGTCCCAGAAGCACGAGAATGGTAGTTCACT 480
consensus_13234#0 CGAAGTTGTTCAACGTGTTAATAAACGCTGGTCCCAGAAGCACGAGAATGGTAGTTCACT 493
consensus_13234#2 CAGAGCTTATCATGAAGTCAAAAAAGTCTGCAGATCTTGTAATCAGATCGGTGG---ATT 444
* ** * *** ** ** *** *** * *** *** * * *
consensus_13234#1 TATTTCAACCGAAGAAATTGCCACGATGCTTCCCATGGATGGTTTCCACCTTTATCGGTC 593
consensus_13234#3 TATTTCAACCGAAGAAATTGCCACGATGCTTCCCATGGATGGTTTCCACCTTTATCGGTC 540
consensus_13234#0 TATTTCAACCGAAGAAATTGCCACGATGCTTCCCATGGATGGTTTCCACCTTTATCGGTC 553
consensus_13234#2 TGTCAAGATAAGAGTCCATGTCTTCA-ATTGCTGATTAGATATCTGCTCTAATAATGTTC 503
* * * ** ** * * * * ** * * * * ** * **
consensus_13234#1 CCAACTAGATGC----AATGGAGGATCCAAAAGAAGCACATGCA-AGAAGAGGAGCACCA 648
consensus_13234#3 CCAACTAGATGC----AATGGAGGATCCAAAAGAAGCACATGCA-AGAAGAGGAGCACCA 595
consensus_13234#0 CCAACTAGATGC----AATGGAGGATCCAAAAGAAGCACATGCA-AGAAGAGGAGCACCA 608
consensus_13234#2 AGAGAAAGACACTACCAATGGTTGTTTCCATGGAGATCTTTGTACATATAATAAGCTCAA 563
* *** * ***** * * * * ** ** * * * * *** * *
consensus_13234#1 TGGACATTCGATCCATCCCGGTTTTTGAAATGCCTACAGACCCTGAGAGAAGAGGGTTCA 708
consensus_13234#3 TGGACATTCGATCCATCCCGGTTTTTGAAATGCCTACAGACCCTGNNNNNNNNNNGTTCA 655
consensus_13234#0 TGGACATTCGATCCATCCCGGTTTTTGAAATGCCTACAGACCCTGAGAGAAGAGGGTTCA 668
consensus_13234#2 TGCATCTC---TCCATGGTGATTTTTGTAGATCAAATAAACT-TATCCCCAACCAGTTTG 619
** * * ***** * ****** * * * * ** * ***
consensus_13234#1 GTT-TATGCTCCATCATTTGATCATGGTGTTGGTGATCCAGTTGAAAATGACATATTTGT 767
consensus_13234#3 GTT-TATGCTCCATCATTTGATCATGNNNNTGGTGA------------------------ 690
consensus_13234#0 GTT-TATGCTCCATCATTTGATCATGGTGTTGGTGATCCAGTTGAAAATGACATATTCGT 727
consensus_13234#2 GTTGTACAGTCGATGATG-AATAACTTATTCAACAACATTCTCTGCAAAAAAAAAAAAAA 678
*** ** ** ** ** ** * *
consensus_13234#1 AAAGCCGCAACACAAAATAGTGATTGTCGAAGGCAATTATCTATTACTGGAAGAAGATGC 827
consensus_13234#3 ------------------------------------------------------------
consensus_13234#0 AAAGCCGCAGTGAGTTATCATTGCAGATCCAGAATATATTCTCTTTGTAGATTGCAGAAT 787
consensus_13234#2 AAAAAAAAAAAAA----------------------------------------------- 691
consensus_13234#1 CTGGAGGGACATTAGAGCCTTGTTTGATGAAAAATGGTTTATCGATATTGACATTGATGT 887
consensus_13234#3 ------------------------------------------------------------
consensus_13234#0 GCTTGAACTCTAGTTTCTTATTTCGATTTAAATCAAATGTGAAGCATGCCTGAGTTATTC 847
consensus_13234#2 ------------------------------------------------------------
consensus_13234#1 CTCCATGCAAAGAGTGCTCCAGAGACATGTCGCCACAGGAAAAGAGCCAGATGTAGCAGC 947
consensus_13234#3 ------------------------------------------------------------
consensus_13234#0 ATATAGTTAGTTCAGATGCTGAACACACTGGCCTTTATAGAACCTTTTAGACCAACTCAC 907
consensus_13234#2 ------------------------------------------------------------
consensus_13234#1 ATGGCGGATCTCGTATAATGACCGGCCAAACGCAGAGCT----TATCATGAAGTCAAAAA 1003
consensus_13234#3 ------------------------------------------------------------
consensus_13234#0 TTTTAGCATTACCTAACACTGGAACCTTATGCTGTTATTATGCTGTGTGGAATGATCATA 967
consensus_13234#2 ------------------------------------------------------------
consensus_13234#1 AGTCTGCAGATCTTGTAATCAGATCGGTGGATTTGTCAAGATAAGAGTCCATGTCTTCAA 1063
consensus_13234#3 ------------------------------------------------------------
consensus_13234#0 TTCTATCAGGCACTGCCAAGTTCTAATTAATCTTTTTTTAATGAATACCTGTGTTTGGAA 1027
consensus_13234#2 ------------------------------------------------------------
consensus_13234#1 TTGCTGATTAGATATCTGCTCTAATAATGTTCAGAGAAAGACACTACCAATGGTTGTTTC 1123
consensus_13234#3 ------------------------------------------------------------
consensus_13234#0 CTTTGTATGCCTGTATGCGGTATGTGAATAGCCGCAAGCAGATACCTTTATGAGAAGTTT 1087
consensus_13234#2 ------------------------------------------------------------
consensus_13234#1 CATGGAGATCTTTGTACATATAATAAGCTCAATGCATCTCTCCATGGTGATTTTTGTAGA 1183
consensus_13234#3 ------------------------------------------------------------
consensus_13234#0 TGTTTTATGCTTTATCTTTCTAACAGATTATGGCTCTCGCACCAAAAATGGTTTATTTTA 1147
consensus_13234#2 ------------------------------------------------------------
consensus_13234#1 TCAAATAAACTTATCCCCAACCAGTTTGGTTGTACAGTCGATGATGAATAACTTAAAA-- 1241
consensus_13234#3 ------------------------------------------------------------
consensus_13234#0 AACAAGCCAGGTAATTTACCCTAAGTATGTTCAGCACATGCTGGTTACTAATTACTATGA 1207
consensus_13234#2 ------------------------------------------------------------
consensus_13234#1 ------------------------------------------------------------
consensus_13234#3 ------------------------------------------------------------
consensus_13234#0 TTTTGGCAGACACAAAATAGTGATTGTCGAAGGCAATTATCTATTACTGGAAGAAGATGC 1267
consensus_13234#2 ------------------------------------------------------------
consensus_13234#1 ------------------------------------------------------------
consensus_13234#3 ------------------------------------------------------------
consensus_13234#0 CTGGAGGGACATTAGAGCCTTGTTTGATGAAAAATGGTTTATCGATATTGACATTGATGT 1327
consensus_13234#2 ------------------------------------------------------------
consensus_13234#1 ------------------------------------------------------------
consensus_13234#3 ------------------------------------------------------------
consensus_13234#0 CTCCATGCAAAGAGTGCTCCAGAGACATGTCGCCACAGGAAAAGAGCCAGATGTAGCAGC 1387
consensus_13234#2 ------------------------------------------------------------
consensus_13234#1 ------------------------------------------------------------
consensus_13234#3 ------------------------------------------------------------
consensus_13234#0 ATGGCGGATCTCGTATAATGACCGGCCAAACGCAGAGCTTATCATGAAGTCAAAAAAGTC 1447
consensus_13234#2 ------------------------------------------------------------
consensus_13234#1 ------------------------------------------------------------
consensus_13234#3 ------------------------------------------------------------
consensus_13234#0 TGCAGATCTTGTAATCAGATCGGTGGATTTGTCAAGATAAGAGTCCATGTCTTCAATTGC 1507
consensus_13234#2 ------------------------------------------------------------
consensus_13234#1 ------------------------------------------------------------
consensus_13234#3 ------------------------------------------------------------
consensus_13234#0 TGATTAGATATCTGCTCTAATAATGTTCAGAGAAAGACACTACCAATGGTTGTTTCCATG 1567
consensus_13234#2 ------------------------------------------------------------
consensus_13234#1 ------------------------------------------------------------
consensus_13234#3 ------------------------------------------------------------
consensus_13234#0 GAGATCTTTGTACATATAATAAGCTCAATGCATCTCTCCATGGTGATTTTTGTAGATCAA 1627
consensus_13234#2 ------------------------------------------------------------
consensus_13234#1 ------------------------------------------------------------
consensus_13234#3 ------------------------------------------------------------
consensus_13234#0 ATAAACTTATCCCCAACCAGTTTGGTTGTACAGTCGATGATGAATAACTTATTCAACACC 1687
consensus_13234#2 ------------------------------------------------------------
consensus_13234#1 -------------------------------------------------------
consensus_13234#3 -------------------------------------------------------
consensus_13234#0 ATTTTTGGCAATTTTCCTACTCTTGAAGAATATGTTTCCAACATCAACTAAAAAA 1742
consensus_13234#2 -------------------------------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||