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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13713#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 3054 fasta sequence
[CGACACCTCCCCTGAATGAATGAATGAATCCTACTAGGCCAGCACTGCTGCTGCCTGCTGCTCCCAACTCGACGACGCCAACCACCTCGCCTCGCTTAGCTCCCACCTAAACAGTAAGAGCACACAGCCCAAACCGGCGGGAGATCCGAAGCGCAGCCAAGAACGCATCACTGTCCTCTTCGTCTTCGTGCATGGAGTTGACCGGCCTGACGCGGGCGGCGGCGGCGGCCACCGTGACGCCGCCGGCGCCGCGCCGGGGATGGGGCGAGCTCCGGTTCGCGCCGCTGCTGCCCGGCGAGCGGCATGGGAGGAGGAAGGTGGTGGTGGCGGCCATCAGCGAGGAGGTGCCGCGGCTGGCGGCGTCGCCGTCGTCGGGGATCAAGGGCGGCGGGGCCGGGGAGAGGCGGCCGGCGCCGGAGAAGGTGGCGCTGCGGGCGGCGCTGACGGTGCGGCGGAAGCAGAAGGAGGACATCAAGGAGGCGGTGGCCGGACACCTCGACGCGCTCTGGGACATGGTCGGCCGGAATGTCGTGCTCGAGCTCATCAGCACCAAGATCCACCCAAGGACCAAGAAGCCGATGCAGAGTGGCCGTGTGTCCATCAAGGACTGGTGCCAGAAGAGGGGAGCCAAGGGCGACCACGTCGTGTACACGGCCGAGTTCACGGTGGACGCCGACTTCGGCGAGCCGGGCGCCATCGCCGTGGCCAACCGGCACAACAGGGAGTTCTTCCTGGAGAGCATCGTCGTCGAGGGCGGCGGCCTGCCGTGCGGGCCTGTGCACTTCGCCTGCAACTCCTGGGTGCAGTCCACCAGAGAGCTGCCAACAAAGAGGGTGTTCTTCAGCAACAAGCCATATTTACCTTCTGAAACACCTCCCGGGCTTAGAGAACTAAGGGAGAAGGAACTTAAAGACCTAAGAGGAGATGGCACAGGTGTTCGGAAATTATCTGACAGAATATATGATTATGCCACATACAATGATTTGGGAAA-TCCAGATAAGGGGAAGGAATTCATCAGGCCGATCCTTGGAGGAGAGAAGATACCTTACCCACGGCGTTGCCGGACTGGTCGCCCGCCAACGGATACCAACATGCTAGCAGAGAGCAGAGTAGAGAAGCCGCATCCAATATATGTTCCCCGCGATGAGGCATTTGAGGAGCTGAAGCAGGGTGCCTTCTCATCAGGGAGGCTCCGGGCAGTACTTCACACATTGATGCCATCGCTGATTGCATCCATCTCAGCTGAGACCCACAATTTCCAAGGCTTCCACCACATCGACAACCTCTATAAGGAGGGCCTCAGGCTGAAGCTGGGCCTGCAAGAACACCTATTCCAGAAGATACCACTTGTTCAGAAGATTCAAGAGTCGAGCGAAGGGATGCTTCGTTACGACACTCCTAGCATTCTTTCTAAGGACAAGTTTGCATGGCTCCGTGACGATGAGTTTGCTAGGCAGGCTGTTGCAGGAATAAACCCAGTTAACATTGAGCGGCTGCAGGTTTTCCCACCAGTGAGCAAGCTGGATCCTGCAATCTATGGACCACCAGAATCATCAATTACTGAAACACACATAGCTGGACATCTCAACGGACTCACAGTACAACAGGCAATGGACGAAGCAAAGCTGTTCATAGTGGACTACCATGACGCATACCTGCCATTCTTGGACCGGATCAATGCGATAGATGGACGGAAAGCATATGCGACCCGAACAATCTTCTTCCTGACAGAAGCTGGCACACTGAAACCGATCGCTATCGAGCTTAGTCTTCCTCCAGCCAAGCCAGGGGAGCCTCGGCCAAGCAAGGTCCTGACGCCTCCCTATGATGCTACCTCGAATTGGCTCTGGATGCTTGCCAAGGCCCATGTCAGCTCCAACGATGCTGGTGTCCATCAGCTGGTCAATCACTGGCTTAGGACGCATGCAACAATGGAGCCGTTCATCCTGGCGGCGCACCGGCATATGAGCGCAATGCACCCCATCTTCAAGCTCCTGCACCCGCACATGCGGTACACGCTCGAGATCAACGCGCTTGCACGGCAGAGCCTCATCAACGCCGACGGAGTGATCGAGTCCTGCTTCACCCCCGGCCCTGTCTCCGGCGAGATCAGCGCTGCTTACTACCGTAACCACTGGCGGTTCGACCTGGAGGGCCTCCCTTCCGACCTCATCCGCAGGGGAGTTGCTGTGGAGGACGCGACGCAGCCCCATGGCGTCAGGCTTCTCATCGAGGACTACCCATACGCGAATGATGGGCTCCTGCTCTGGTCGGCAATTCGAAGCTGGGTGGAGTCCTACGTGCAGCTCTACTACCCGGACGCCGGGACGGTGCAGTGCGATCTTGAGCTGCAGGGGTGGTACCACGAGTCGATCCATGTCGGGCACGGCGACCTCCGGCACGCGCCGTGGTGGCCGCCGCTCTCCACGCCGGTGGACCTGGCGTCCATCCTGACGACGCTGGTCTGGCTCGCGTCGGCGCAGCACGCGGCGCTCAACTTCGGGCAGTACCCGCTGGGCGGGTACGTCCCGAACCGGCCGCCGCTGATACGGCGGCTGCTGCCGGACCTGGAGCGCGACGCGGCGGAGTACGCCGCGTTCCTCGCCGACCCGCACCGCTTCTTCCTGAACGCGATGCCCGGGGTGCTGGAGGCGACCAAGTTCATGGCGGTGGTGGACACGCTGTCGACGCACTCGCCCGACGAGGAGTACCTCGGCGAGGGGCGGGACGAGGGCGGCGTGCCGTGGACGGCGGACGAGGCGGCCGTGGCGGCGCACGGCATGTTCGCGGCCGATGTGCGACGCGCCGAGGAGACCATCGAGAGGCGGAACGCCGACCACGGCCGGAAGAACCGGTG-CGGCGCCGGGGTGCTGCCGTACGAACTGCTGGCGCCCAGCTCGCCGCCGGGGGTCACCTGCCGCGGCGTGCCCAACAGCATCTCCATCTGATCTGGCGACATTGCCGATCCATTCATTCCTCTTTGTGTTCTGGATCAATAATTTTAGTAAAATGAATATGAAATAGGAGTATTAATCAGTATCCGTACCCAAGAAA]
[+] EMBL AK121637 [CGACACCTCCCCTGAATGAATGAATGAATCCTACTAGGCCAGCACTGCTGCTGCCTGCTGCTCCCAACTCGACGACGCCAACCACCTCGCCTCGCTTAGCTCCCACCTAAACAGTAAGAGCACACAGCCCAAACCGGCGGGAGATCCGAAGCGCAGCCAAGAACGCATCACTGTCCTCTTCGTCTTCGTGCATGGAGTTGACCGGCCTGACGCGGGCGGCGGCGGCGGCCACCGTGACGCCGCCGGCGCCGCGCCGGGGATGGGGCGAGCTCCGGTTCGCGCCGCTGCTGCCCGGCGAGCGGCATGGGAGGAGGAAGGTGGTGGTGGCGGCCATCAGCGAGGAGGTGCCGCGGCTGGCGGCGTCGCCGTCGTCGGGGATCAAGGGCGGCGGGGCCGGGGAGAGGCGGCCGGCGCCGGAGAAGGTGGCGCTGCGGGCGGCGCTGACGGTGCGGCGGAAGCAGAAGGAGGACATCAAGGAGGCGGTGGCCGGACACCTCGACGCGCTCTGGGACATGGTCGGCCGGAATGTCGTGCTCGAGCTCATCAGCACCAAGATCCACCCAAGGACCAAGAAGCCGATGCAGAGTGGCCGTGTGTCCATCAAGGACTGGTGCCAGAAGAGGGGAGCCAAGGGCGACCACGTCGTGTACACGGCCGAGTTCACGGTGGACGCCGACTTCGGCGAGCCGGGCGCCATCGCCGTGGCCAACCGGCACAACAGGGAGTTCTTCCTGGAGAGCATCGTCGTCGAGGGCGGCGGCCTGCCGTGCGGGCCTGTGCACTTCGCCTGCAACTCCTGGGTGCAGTCCACCAGAGAGCTGCCAACAAAGAGGGTGTTCTTCAGCAACAAGCCATATTTACCTTCTGAAACACCTCCCGGGCTTAGAGAACTAAGGGAGAAGGAACTTAAAGACCTAAGAGGAGATGGCACAGGTGTTCGGAAATTATCTGACAGAATATATGATTATGCCACATACAATGATTTGGGAAA TCCAGATAAGGGGAAGGAATTCATCAGGCCGATCCTTGGAGGAGAGAAGATACCTTACCCACGGCGTTGCCGGACTGGTCGCCCGCCAACGGATACCAACATGCTAGCAGAGAGCAGAGTAGAGAAGCCGCATCCAATATATGTTCCCCGCGATGAGGCATTTGAGGAGCTGAAGCAGGGTGCCTTCTCATCAGGGAGGCTCCGGGCAGTACTTCACACATTGATGCCATCGCTGATTGCATCCATCTCAGCTGAGACCCACAATTTCCAAGGCTTCCACCACATCGACAACCTCTATAAGGAGGGCCTCAGGCTGAAGCTGGGCCTGCAAGAACACCTATTCCAGAAGATACCACTTGTTCAGAAGATTCAAGAGTCGAGCGAAGGGATGCTTCGTTACGACACTCCTAGCATTCTTTCTAAGGACAAGTTTGCATGGCTCCGTGACGATGAGTTTGCTAGGCAGGCTGTTGCAGGAATAAACCCAGTTAACATTGAGCGGCTGCAGGTTTTCCCACCAGTGAGCAAGCTGGATCCTGCAATCTATGGACCACCAGAATCATCAATTACTGAAACACACATAGCTGGACATCTCAACGGACTCACAGTACAACAGGCAATGGACGAAGCAAAGCTGTTCATAGTGGACTACCATGACGCATACCTGCCATTCTTGGACCGGATCAATGCGATAGATGGACGGAAAGCATATGCGACCCGAACAATCTTCTTCCTGACAGAAGCTGGCACACTGAAACCGATCGCTATCGAGCTTAGTCTTCCTCCAGCCAAGCCAGGGGAGCCTCGGCCAAGCAAGGTCCTGACGCCTCCCTATGATGCTACCTCGAATTGGCTCTGGATGCTTGCCAAGGCCCATGTCAGCTCCAACGATGCTGGTGTCCATCAGCTGGTCAATCACTGGCTTAGGACGCATGCAACAATGGAGCCGTTCATCCTGGCGGCGCACCGGCATATGAGCGCAATGCACCCCATCTTCAAGCTCCTGCACCCGCACATGCGGTACACGCTCGAGATCAACGCGCTTGCACGGCAGAGCCTCATCAACGCCGACGGAGTGATCGAGTCCTGCTTCACCCCCGGCCCTGTCTCCGGCGAGATCAGCGCTGCTTACTACCGTAACCACTGGCGGTTCGACCTGGAGGGCCTCCCTTCCGACCTCATCCGCAGGGGAGTTGCTGTGGAGGACGCGACGCAGCCCCATGGCGTCAGGCTTCTCATCGAGGACTACCCATACGCGAATGATGGGCTCCTGCTCTGGTCGGCAATTCGAAGCTGGGTGGAGTCCTACGTGCAGCTCTACTACCCGGACGCCGGGACGGTGCAGTGCGATCTTGAGCTGCAGGGGTGGTACCACGAGTCGATCCATGTCGGGCACGGCGACCTCCGGCACGCGCCGTGGTGGCCGCCGCTCTCCACGCCGGTGGACCTGGCGTCCATCCTGACGACGCTGGTCTGGCTCGCGTCGGCGCAGCACGCGGCGCTCAACTTCGGGCAGTACCCGCTGGGCGGGTACGTCCCGAACCGGCCGCCGCTGATACGGCGGCTGCTGCCGGACCTGGAGCGCGACGCGGCGGAGTACGCCGCGTTCCTCGCCGACCCGCACCGCTTCTTCCTGAACGCGATGCCCGGGGTGCTGGAGGCGACCAAGTTCATGGCGGTGGTGGACACGCTGTCGACGCACTCGCCCGACGAGGAGTACCTCGGCGAGGGGCGGGACGAGGGCGGCGTGCCGTGGACGGCGGACGAGGCGGCCGTGGCGGCGCACGGCATGTTCGCGGCCGATGTGCGACGCGCCGAGGAGACCATCGAGAGGCGGAACGCCGACCACGGCCGGAAGAACCGGTG CGGCGCCGGGGTGCTGCCGTACGAACTGCTGGCGCCCAGCTCGCCGCCGGGGGTCACCTGCCGCGGCGTGCCCAACAGCATCTCCATCTGATCTGGCGACATTGCCGATCCATTCATTCCTCTTTGTGTTCTGGATCAATAATTTTAGTAAAATGAATATGAAATAGGAGTATTAATCAGTATCCGTACCC ]
[+] EMBL C98674 [ ATGAATGAATGAATCCTACTAGGCCAGCACTGCTGCTGCCTGCTGCTCCCAACTCGACGACGCCAACCACCTCGCCTCGCTTAGCTCCCACCTAAACAGTAAGAGCACACAGCCCAAACCGGCGGGAGATCCGAAGCGCAG CAAGAACGCATCACTGTCCTCTTCGTCTTCGTGCATGGAGTTGACCGGCCTGANGCGGGNGGNGGCGGCGGCCACCGTGACGNCGNCGGCGCCGCGCCGGGGATGGGGCGAGCTCCGGTTCGCGCCGNTGCTGCCCGGCGAGCGGCATGGGAGGAGGAAGGTGGTGGTGGCGGCCATCA ]
[+] EMBL C72044 [ GCCAGCACTGCTGCTGCCTGCTGCTCCCAACTCGACGACGCCAACCACCTCGCCTCGCTTAGCTCCCACCTAAACAGTAAGAGCACACAGCCCAAACCGGCGGGAGATCCGAAGCGCAG CAAGAACGCATCANTGTCCTCTTCGTCTTCGTGCATGGAGTTNACCGGNCTGATGCGGGTGGNGGCGGCGGCCACCGTAACGNCGCNGGCCCCGCGCCG ]
[+] EMBL CB685649 [ AACCCGTGGGAGATCCGAAGCGCAGCCAAGAACGCATCACTGTCCTCTTCGTCTTCGTGCATGGAGTTGACCGGCCTGACGCGGGCGGCGGCGGCGGCCACCGTGACGCCGCCGGCGCCGCGCCGGGGATGGGGCGAGCTCCGGTTCGCGCCGCTGCTGCCCGGCGAGCGGCATGGGAGGAGGAAGGTGGTGGTGGCGGCCATCAGCGAGGAGGTGCCGCGGCTGGCGGCGTCGCCGTCGTCGGGGATCAAGGGCGGCGGGGCCGGGGAGAGGCGGCCGGCGCCGGAGAAGGTGGCGCTGCGGGCGGCGCTGACGGTGCGGCGGAAGCAGAAGGAGGACATCAAGGAGGCGGTGGCCGGACACCTCGACGCGCTCTGGGACATGGTCGGCCGGAATGTCGTGCTCGAGCTCATCAGCACCAAGATCCACCCAAGGACCAAGAAGCCGATGCAGAGTGGCCGTGTGTCCATCAAGGACTGGTGCCAGAAGAGGGGAGCCAAGGGCGACCACGTCGTGTACACGGCCGAGTTCACGGTGGACGCCGACTTCGGCGAGCCGGGCGCCATCGCCGTGGCCAACCGGCACAACAGGGAGTTCTTCCTGGAGAGCATCGTCGTCGAGGGCGGCGGCCTGCCGTGCGGGCCTGTGCACTTCGCCTGCAACTCCTGGGTGCAGTCCACCAGAG ]
[+] EMBL CF307016 [ TCTGAAACACCTCCCGGGCTTAGAGAACTAAGGGAGAAGGAACTTAAAGACCTAAGAGGAGATGGCACAGGTGTTCGGAAATTATCTGACAGAATATATGATTATGCCACATACAATGATTTGGGAAATTTTTTATAAGGGGAAGGAATTCATCAGGCCGATCCTTGGAGGAGAGAAGATACCTTACCCACGGCGTTGCCGGACTGGTCGCCCGCCAACGGATACCAACATGCTAGCAGAGAGCAGAGTAGAGAAGCCGCATCCAATATATGT ]
[+] EMBL CF306347 [ TCTGAAACACCTCCCGGGCTTAGAGAACTAAGGGAGAAGGAACTTAAAGACCTAAGAGGAGATGGCACAGGTGTTCGGAAATTATCTGACAGAATATATGATTATGCCACATACAATGATTTGGGAAA TCCAGATAAGGGGAAGGAATTCATCAGGCCGATCCTTGGAGGAGAGAAGATACCTTACCCACGGCGTTGCCGGACTGGTCGCCCGCCAACGGATACCAACATGCTAGCAGAGAGCAGAGTAGAGAAGCCGCATCCAATATATGTTCCCCGCGATGAGGCATTTGAGGAGCTGAAGCAGGGTGCCTTCTCATCAGGGAGGCTCCGGGCAGTACTTCACACATTGATCCCATCGCTGATTGCATCCATCTCAGCTGAGACCCACAATTTCCAAGGCTTCCACCACATCGACAACCTCTATAAGGAGGGCCTCAGGCTGAAGCTGGGCCTGCAAGAACACCTATTCCAGAAGATACCACTTGTTCAGAAGATTCAAGAGTCGAGCGAAGGGATGCTTCGTTACGACACTCCTAGCATTCTTTCTAAGGACAAGTTTGCATGGCTCCGTGACGATGAGTTTGCTAGGCAGGCTGTTGCAGGAATAAACCCAGTTAACATTGAGCGGCTGCAGGTTTTCCCACCAGTGAGCAAGCTGGATCCTGCAATCTATGGACCACCAGAATCATCAATTACTGAAAC ]
[+] EMBL AU172450 [ GCACCGCTTCTTCCTGAACGCGATGCCCGGGGTGCTGGAGGCGACCAAGTTCATGGCGGTGGTGGACACGCTGTCGACGCACTCGCCCGACGAGGAGTACCTCGGCGAGGGGCGGGACGAGGGCGGCGTGCCGTGGACGGCGGACGAGGCGGCCGTGGCGGCGCACGGCATGTTCGCGGCCGATGTGCGACGCGCCGAGGAGACCATCGAGAGGCGGAACGCCGACCACGGCCGGAAGAACCGGTG CGGCGCCGGGGTGCTGCCGTACGAACTGCTGGCGCCCAGCTCGCCGCCGGGGGTCACCTGCCGCGGCGTGCCCAACAGCATCTCCATCTGATCTGGCGACATTGCCGATCCATTCATTCCTCTTTGTGTTCTGGATCAATAATTTTAGTAAAATGAATATGAAATAGGAGTATTAATCAGTATCCGTAaaaaa ]
[+] EMBL BI805778 [ CGT GCGGCGCACGGCATGTTCGCGGCCGATGTGCGACGCGCCGAGGAGACCATCGAGAGNCGGAACGCCGACCCCGGCCGGAAGAACCGGTGTCGGCGCCGGGGTGCTGCCGTACGAACTGCTGGCGCCCAGCTC CCGCC GGGGTCACCT CC CGGCGTGCCCAACAGCATCTCCATCTGATCTGGCGACATTGCCGATCCANTCATTCCTCTTNGTGTTCTGGATCAATAATTTTAGTAAAATGAANATGAAATAGGAGTATTAATCAGNATCCGNACCCACGAAA]
consensusID : consensus_13713#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1270 fasta sequence
[TTCCTCGAGCACTGTTGGCCTACTGGGATGCTACCTCGAATTGGCTCTGGATGCTTGCCAAGGCCCATGTCAGCTCCAACGATGCTGGTGTCCATCAGCTGGTCAATCACTGGCTTAGGACGCATGCAACAATGGAGCCGTTCATCCTGGCGGCGCACCGGCATATGAGCGCAATGCACCCCATCTTCAAGCTCCTGCACCCGCACATGCGGTACACGCTCGAGATCAACGCGCTTGCACGGCAGAGCCTCATCAACGCCGACGGAGTGATCGAGTCCTGCTTCACCCCCGGCCCTGTCTCCGGCGAGATCAGCGCTGCTTACTACCGTAACCACTGGCGGTTCGACCTGGAGGGCCTCCCTTCCGACCTCATCCGCAGGGGAGTTGCTGTGGAGGACGCGACGCAGCCCCATGGCGTCAGGCTTCTCATCGAGGACTACCCATACGCGAATGATGGGCTCCTGCTCTGGTCGGCAATTCGAAGCTGGGTGGAGTCCTACGTGCAGCTCTACTACCCGGACGCCGGGACGGTGCAGTGCGATCTTGAGCTGCAGGGGTGGTACCACGAGTCGATCCATGTCGGGCACGGCGACCTCCGGCACGCGCCGTGGTGGCCGCCGCTCTCCACGCCGGTGGACCTGGCGTCCATCCTGACGACGCTGGTCTGGCTCGCGTCGGCGCAGCACGCGGCGCTCAACTTCGGGCAGTACCCGCTGGGCGGGTACGTCCCGAACCGGCCGCCGCTGATACGGCGGCTGCTGCCGGACCTGGAGCGCGACGCGGCGGAGTACGCCGCGTTCCTCG-CCGACCCGCACCGCTTCTTCCTGAACGCGATGCCCGGGGTGCTGGAGGCGA-CCAAGTTCATGGCGGTGGTGGACACGCTGTCGACGCACTCGCCCGACGAGGAGTACCTCGGCGAGGGGCGGGACGAGGGCGGCGTGCCGTGGACGGCGGACGAGGCGGCCGTGGCGGCGCA-CGGCATGTTCGCGGCCGATGTGCGACGCGCCGAGGAGACCATCGAGAGGCGGAACGCCGACCACGGCCGGAAGAACCGGTGCGGCGCCGGGGTGCTGCCGTACGAACTGCTGGCGCCCAGCTCGCCGCCGGGGGTCACCTGCCGCGGCGTGCCCAACAGCATCTCCATCTGATCTGGCGACATTGCCGATCCATTCATTCCTCTTTGTGTTCTGGATCAATAATTTTAGTAAAATGAATATGAAATAGGAGTATTAATCAGTAAAAAAAAAAAAAAAAAAAAAAAAGGCCACAT]
[+] EMBL AK109440 [TTCCTCGAGCACTGTTGGCCTACTGGGATGCTACCTCGAATTGGCTCTGGATGCTTGCCAAGGCCCATGTCAGCTCCAACGATGCTGGTGTCCATCAGCTGGTCAATCACTGGCTTAGGACGCATGCAACAATGGAGCCGTTCATCCTGGCGGCGCACCGGCATATGAGCGCAATGCACCCCATCTTCAAGCTCCTGCACCCGCACATGCGGTACACGCTCGAGATCAACGCGCTTGCACGGCAGAGCCTCATCAACGCCGACGGAGTGATCGAGTCCTGCTTCACCCCCGGCCCTGTCTCCGGCGAGATCAGCGCTGCTTACTACCGTAACCACTGGCGGTTCGACCTGGAGGGCCTCCCTTCCGACCTCATCCGCAGGGGAGTTGCTGTGGAGGACGCGACGCAGCCCCATGGCGTCAGGCTTCTCATCGAGGACTACCCATACGCGAATGATGGGCTCCTGCTCTGGTCGGCAATTCGAAGCTGGGTGGAGTCCTACGTGCAGCTCTACTACCCGGACGCCGGGACGGTGCAGTGCGATCTTGAGCTGCAGGGGTGGTACCACGAGTCGATCCATGTCGGGCACGGCGACCTCCGGCACGCGCCGTGGTGGCCGCCGCTCTCCACGCCGGTGGACCTGGCGTCCATCCTGACGACGCTGGTCTGGCTCGCGTCGGCGCAGCACGCGGCGCTCAACTTCGGGCAGTACCCGCTGGGCGGGTACGTCCCGAACCGGCCGCCGCTGATACGGCGGCTGCTGCCGGACCTGGAGCGCGACGCGGCGGAGTACGCCGCGTTCCTCG CCGACCCGCACCGCTTCTTCCTGAACGCGATGCCCGGGGTGCTGGAGGCGA CCAAGTTCATGGCGGTGGTGGACACGCTGTCGACGCACTCGCCCGACGAGGAGTACCTCGGCGAGGGGCGGGACGAGGGCGGCGTGCCGTGGACGGCGGACGAGGCGGCCGTGGCGGCGCA CGGCATGTTCGCGGCCGATGTGCGACGCGCCGAGGAGACCATCGAGAGGCGGAACGCCGACCACGGCCGGAAGAACCGGTGCGGCGCCGGGGTGCTGCCGTACGAACTGCTGGCGCCCAGCTCGCCGCCGGGGGTCACCTGCCGCGGCGTGCCCAACAGCATCTCCATCTGATCTGGCGACATTGCCGATCCATTCATTCCTCTTTGTGTTCTGGATCAATAATTTTAGTAAAATGAATATGAAATAGGAGTATTAATCAGTAAAAAAAAAAAAAAAAAAAAAAAAGGCCACAT]
[+] EMBL C72624 [ CCGTAACCACTGGCGGTTCGACCTGGAGGGCCTCCCTTCCGACCTCATCCGCA GGGAGTTGCTGTGGAGGACGCGACGCAGCCCCATGGCGTCAGGCTTCTCATCGAGGACTACCCATACGCGAATGATGGGCTCCTGCTCTGGTCGGCAATTCGAAGCTGGGTGGAGTCCTACGTGCAGCTCTACTACCCGGACGCCGGGACGGTGCAGTGCGATCTTGAGCTGCAGGGGTGGTACCACGAGTCGATCCATGTCGGGCACGGCGACCTCCGGCACGCGCCGTGGTGGCCGCCGCTCTCCACGCCGGTGGACCTGGCGTCCATCCTGACGACGCTGGTCTGGCTCGCGTCGGCGCAG ACGCGGCGCTC ANTTCGGGCAGTAACCG TGGGCGGGTAAGTNCCGAACgg ]
[-] EMBL CB685650 [ GGGTGGTACCACGAGTCGATCCATGTCGGGCACGGCGACCTCCGGCACGCGCCGTGGTGGCCGCCGCTCTCCACGCCGGTGGACCTGGCGTCCATCCTGACGACGCTGGTCTGGCTCGCGTCGGCGCAGCACGCGGCGCTCAACTTCGGGCAGTACCCGCTGGGCGGGTACGTCCCGAACCGGCCGCCGCTGATACGGCGGCTGCTGCCGGACCTGGAGCGCGACGCGGCGGAGTACGCCGCGTTCCTCG CCGACCCGCACCGCTTCTTCCTGAACGCGATGCCCGGGGTGCTGGAGGCGA CCAAGTTCATGGCGGTGGTGGACACGCTGTCGACGCACTCGCCCGACGAGGAGTACCTCGGCGAGGGGCGGGACGAGGGCGGCGTGCCGTGGACGGCGGACGAGGCGGCCGTGGCGGCGCA CGGCATGTTCGCGGCCGATGTGCGACGCGCCGAGGAGACCATCGAGAGGCGGAACGCCGACCCCGGCCGGAAGAACCGGTGCGGCGCCGGGGTGCTTCCGTACGAACTGCTGGCGCCCAGCTCGCCGCCGGGGGTCACCTGCCGCGGGGTGCCCAACAGCATGTCCATTTGATGTGGGGACATGGCGGATCCATTCATTCCTCTTGGTGTTGTGGATCAATAAGTTTAGTAAAAGGAATATGAAATAGGAGTATTCATCA AAAAAggga ]
[+] EMBL BI807953 [ CGAC CGGCGGAGTACGCCGCGTTCCTCGTCCGACCCGCACCGCTTCTTCCTGAACGCGATGCCCGGGGTGCTGGAGGCGA CCAAGTTCATGCCGGTGGTGGACACGCTGTCGACGCACTCGCCCGACGAGGAGTACCTCGGCGAGGGGCGGGACGAGGGCGGCGT CCGTGGACGGCGGACGAGGCGCCCGTGGCGGCGCACCGGCATGTTCGCGGCCGATGTGCGACGCGCCGAGGAGACCATCGAGAGGCGGAACGCCGACCACGGCCGGAAGAACCGGTGCGGCGCCGGGGTGCTGCCGTACGAACTGCTGGCGCCCAGCTCGCCGCCGGGGGTCACCTGCCGCGGCGTGCCCAACAGCATCTCCATCTGATCTGGCGACATTGCCGATCCATTCATTCCTCTTTGTGTTCTGGATCAATAATTTTAGTAAAATGAATATGAAATAGGAGTATTAATCAGTAAAAAAAAAA ]
[+] EMBL AU085861 [ CGATGCCCGGGGTNCTGGAGGCGACCCAAGTTCATGGCGGTGGTGGACACGCTGTCGACGCACTCGCCCGACGAGGAGTACCTCGGCGAGGGCCGGGACGAGGNCGGCGTNCCGTGGACGNCGGACGAGGCGGCCNTGGCGGCGCA CGGCATGTTCGCGGCCGATGTGCGACGCGCCGAGGAGACCATCGAGAGGCGGAACGCCGACCACGGCCGGAAGAACCGGTGCGGCGCCGGGGTGCTGCCGTACGAACTG TGGCGCCCAGCTCGCCGCCGGGGGTCACCTGCCGCGGCGTGCCCAACAGCATCTCCATCTGATCTGGCGACATTGCCGATCCATTCATTCCTCTTTGTGTTCTGGATCAATAATTTTAGTAAAATGAATATGAAATAGGAGTATTAATCA AAAAA ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_13713#0 CGACACCTCCCCTGAATGAATGAATGAATCCTACTAGGCCAGCACTGCTGCTGCCTGCTG 60
consensus_13713#1 ------------------------------------------------------------
consensus_13713#0 CTCCCAACTCGACGACGCCAACCACCTCGCCTCGCTTAGCTCCCACCTAAACAGTAAGAG 120
consensus_13713#1 ------------------------------------------------------------
consensus_13713#0 CACACAGCCCAAACCGGCGGGAGATCCGAAGCGCAGCCAAGAACGCATCACTGTCCTCTT 180
consensus_13713#1 ------------------------------------------------------------
consensus_13713#0 CGTCTTCGTGCATGGAGTTGACCGGCCTGACGCGGGCGGCGGCGGCGGCCACCGTGACGC 240
consensus_13713#1 ------------------------------------------------------------
consensus_13713#0 CGCCGGCGCCGCGCCGGGGATGGGGCGAGCTCCGGTTCGCGCCGCTGCTGCCCGGCGAGC 300
consensus_13713#1 ------------------------------------------------------------
consensus_13713#0 GGCATGGGAGGAGGAAGGTGGTGGTGGCGGCCATCAGCGAGGAGGTGCCGCGGCTGGCGG 360
consensus_13713#1 ------------------------------------------------------------
consensus_13713#0 CGTCGCCGTCGTCGGGGATCAAGGGCGGCGGGGCCGGGGAGAGGCGGCCGGCGCCGGAGA 420
consensus_13713#1 ------------------------------------------------------------
consensus_13713#0 AGGTGGCGCTGCGGGCGGCGCTGACGGTGCGGCGGAAGCAGAAGGAGGACATCAAGGAGG 480
consensus_13713#1 ------------------------------------------------------------
consensus_13713#0 CGGTGGCCGGACACCTCGACGCGCTCTGGGACATGGTCGGCCGGAATGTCGTGCTCGAGC 540
consensus_13713#1 ------------------------------------------------------------
consensus_13713#0 TCATCAGCACCAAGATCCACCCAAGGACCAAGAAGCCGATGCAGAGTGGCCGTGTGTCCA 600
consensus_13713#1 ------------------------------------------------------------
consensus_13713#0 TCAAGGACTGGTGCCAGAAGAGGGGAGCCAAGGGCGACCACGTCGTGTACACGGCCGAGT 660
consensus_13713#1 ------------------------------------------------------------
consensus_13713#0 TCACGGTGGACGCCGACTTCGGCGAGCCGGGCGCCATCGCCGTGGCCAACCGGCACAACA 720
consensus_13713#1 ------------------------------------------------------------
consensus_13713#0 GGGAGTTCTTCCTGGAGAGCATCGTCGTCGAGGGCGGCGGCCTGCCGTGCGGGCCTGTGC 780
consensus_13713#1 ------------------------------------------------------------
consensus_13713#0 ACTTCGCCTGCAACTCCTGGGTGCAGTCCACCAGAGAGCTGCCAACAAAGAGGGTGTTCT 840
consensus_13713#1 ------------------------------------------------------------
consensus_13713#0 TCAGCAACAAGCCATATTTACCTTCTGAAACACCTCCCGGGCTTAGAGAACTAAGGGAGA 900
consensus_13713#1 ------------------------------------------------------------
consensus_13713#0 AGGAACTTAAAGACCTAAGAGGAGATGGCACAGGTGTTCGGAAATTATCTGACAGAATAT 960
consensus_13713#1 ------------------------------------------------------------
consensus_13713#0 ATGATTATGCCACATACAATGATTTGGGAAATCCAGATAAGGGGAAGGAATTCATCAGGC 1020
consensus_13713#1 ------------------------------------------------------------
consensus_13713#0 CGATCCTTGGAGGAGAGAAGATACCTTACCCACGGCGTTGCCGGACTGGTCGCCCGCCAA 1080
consensus_13713#1 ------------------------------------------------------------
consensus_13713#0 CGGATACCAACATGCTAGCAGAGAGCAGAGTAGAGAAGCCGCATCCAATATATGTTCCCC 1140
consensus_13713#1 ------------------------------------------------------------
consensus_13713#0 GCGATGAGGCATTTGAGGAGCTGAAGCAGGGTGCCTTCTCATCAGGGAGGCTCCGGGCAG 1200
consensus_13713#1 ------------------------------------------------------------
consensus_13713#0 TACTTCACACATTGATGCCATCGCTGATTGCATCCATCTCAGCTGAGACCCACAATTTCC 1260
consensus_13713#1 ------------------------------------------------------------
consensus_13713#0 AAGGCTTCCACCACATCGACAACCTCTATAAGGAGGGCCTCAGGCTGAAGCTGGGCCTGC 1320
consensus_13713#1 ------------------------------------------------------------
consensus_13713#0 AAGAACACCTATTCCAGAAGATACCACTTGTTCAGAAGATTCAAGAGTCGAGCGAAGGGA 1380
consensus_13713#1 ------------------------------------------------------------
consensus_13713#0 TGCTTCGTTACGACACTCCTAGCATTCTTTCTAAGGACAAGTTTGCATGGCTCCGTGACG 1440
consensus_13713#1 ------------------------------------------------------------
consensus_13713#0 ATGAGTTTGCTAGGCAGGCTGTTGCAGGAATAAACCCAGTTAACATTGAGCGGCTGCAGG 1500
consensus_13713#1 ------------------------------------------------------------
consensus_13713#0 TTTTCCCACCAGTGAGCAAGCTGGATCCTGCAATCTATGGACCACCAGAATCATCAATTA 1560
consensus_13713#1 ------------------------------------------------------------
consensus_13713#0 CTGAAACACACATAGCTGGACATCTCAACGGACTCACAGTACAACAGGCAATGGACGAAG 1620
consensus_13713#1 ------------------------------------------------------------
consensus_13713#0 CAAAGCTGTTCATAGTGGACTACCATGACGCATACCTGCCATTCTTGGACCGGATCAATG 1680
consensus_13713#1 ------------------------------------------------------------
consensus_13713#0 CGATAGATGGACGGAAAGCATATGCGACCCGAACAATCTTCTTCCTGACAGAAGCTGGCA 1740
consensus_13713#1 ------------------------------------------------------------
consensus_13713#0 CACTGAAACCGATCGCTATCGAGCTTAGTCTTCCTCCAGCCAAGCCAGGGGAGCCTCGGC 1800
consensus_13713#1 -------------------------------------------------------TTCCT 5
*
consensus_13713#0 CAAGCAAGGTCCTGACGCCTCCCTATGATGCTACCTCGAATTGGCTCTGGATGCTTGCCA 1860
consensus_13713#1 CGAGCA-----CTGTTGGCCTACTGGGATGCTACCTCGAATTGGCTCTGGATGCTTGCCA 60
* **** *** * * ** **********************************
consensus_13713#0 AGGCCCATGTCAGCTCCAACGATGCTGGTGTCCATCAGCTGGTCAATCACTGGCTTAGGA 1920
consensus_13713#1 AGGCCCATGTCAGCTCCAACGATGCTGGTGTCCATCAGCTGGTCAATCACTGGCTTAGGA 120
************************************************************
consensus_13713#0 CGCATGCAACAATGGAGCCGTTCATCCTGGCGGCGCACCGGCATATGAGCGCAATGCACC 1980
consensus_13713#1 CGCATGCAACAATGGAGCCGTTCATCCTGGCGGCGCACCGGCATATGAGCGCAATGCACC 180
************************************************************
consensus_13713#0 CCATCTTCAAGCTCCTGCACCCGCACATGCGGTACACGCTCGAGATCAACGCGCTTGCAC 2040
consensus_13713#1 CCATCTTCAAGCTCCTGCACCCGCACATGCGGTACACGCTCGAGATCAACGCGCTTGCAC 240
************************************************************
consensus_13713#0 GGCAGAGCCTCATCAACGCCGACGGAGTGATCGAGTCCTGCTTCACCCCCGGCCCTGTCT 2100
consensus_13713#1 GGCAGAGCCTCATCAACGCCGACGGAGTGATCGAGTCCTGCTTCACCCCCGGCCCTGTCT 300
************************************************************
consensus_13713#0 CCGGCGAGATCAGCGCTGCTTACTACCGTAACCACTGGCGGTTCGACCTGGAGGGCCTCC 2160
consensus_13713#1 CCGGCGAGATCAGCGCTGCTTACTACCGTAACCACTGGCGGTTCGACCTGGAGGGCCTCC 360
************************************************************
consensus_13713#0 CTTCCGACCTCATCCGCAGGGGAGTTGCTGTGGAGGACGCGACGCAGCCCCATGGCGTCA 2220
consensus_13713#1 CTTCCGACCTCATCCGCAGGGGAGTTGCTGTGGAGGACGCGACGCAGCCCCATGGCGTCA 420
************************************************************
consensus_13713#0 GGCTTCTCATCGAGGACTACCCATACGCGAATGATGGGCTCCTGCTCTGGTCGGCAATTC 2280
consensus_13713#1 GGCTTCTCATCGAGGACTACCCATACGCGAATGATGGGCTCCTGCTCTGGTCGGCAATTC 480
************************************************************
consensus_13713#0 GAAGCTGGGTGGAGTCCTACGTGCAGCTCTACTACCCGGACGCCGGGACGGTGCAGTGCG 2340
consensus_13713#1 GAAGCTGGGTGGAGTCCTACGTGCAGCTCTACTACCCGGACGCCGGGACGGTGCAGTGCG 540
************************************************************
consensus_13713#0 ATCTTGAGCTGCAGGGGTGGTACCACGAGTCGATCCATGTCGGGCACGGCGACCTCCGGC 2400
consensus_13713#1 ATCTTGAGCTGCAGGGGTGGTACCACGAGTCGATCCATGTCGGGCACGGCGACCTCCGGC 600
************************************************************
consensus_13713#0 ACGCGCCGTGGTGGCCGCCGCTCTCCACGCCGGTGGACCTGGCGTCCATCCTGACGACGC 2460
consensus_13713#1 ACGCGCCGTGGTGGCCGCCGCTCTCCACGCCGGTGGACCTGGCGTCCATCCTGACGACGC 660
************************************************************
consensus_13713#0 TGGTCTGGCTCGCGTCGGCGCAGCACGCGGCGCTCAACTTCGGGCAGTACCCGCTGGGCG 2520
consensus_13713#1 TGGTCTGGCTCGCGTCGGCGCAGCACGCGGCGCTCAACTTCGGGCAGTACCCGCTGGGCG 720
************************************************************
consensus_13713#0 GGTACGTCCCGAACCGGCCGCCGCTGATACGGCGGCTGCTGCCGGACCTGGAGCGCGACG 2580
consensus_13713#1 GGTACGTCCCGAACCGGCCGCCGCTGATACGGCGGCTGCTGCCGGACCTGGAGCGCGACG 780
************************************************************
consensus_13713#0 CGGCGGAGTACGCCGCGTTCCTCGCCGACCCGCACCGCTTCTTCCTGAACGCGATGCCCG 2640
consensus_13713#1 CGGCGGAGTACGCCGCGTTCCTCGCCGACCCGCACCGCTTCTTCCTGAACGCGATGCCCG 840
************************************************************
consensus_13713#0 GGGTGCTGGAGGCGACCAAGTTCATGGCGGTGGTGGACACGCTGTCGACGCACTCGCCCG 2700
consensus_13713#1 GGGTGCTGGAGGCGACCAAGTTCATGGCGGTGGTGGACACGCTGTCGACGCACTCGCCCG 900
************************************************************
consensus_13713#0 ACGAGGAGTACCTCGGCGAGGGGCGGGACGAGGGCGGCGTGCCGTGGACGGCGGACGAGG 2760
consensus_13713#1 ACGAGGAGTACCTCGGCGAGGGGCGGGACGAGGGCGGCGTGCCGTGGACGGCGGACGAGG 960
************************************************************
consensus_13713#0 CGGCCGTGGCGGCGCACGGCATGTTCGCGGCCGATGTGCGACGCGCCGAGGAGACCATCG 2820
consensus_13713#1 CGGCCGTGGCGGCGCACGGCATGTTCGCGGCCGATGTGCGACGCGCCGAGGAGACCATCG 1020
************************************************************
consensus_13713#0 AGAGGCGGAACGCCGACCACGGCCGGAAGAACCGGTGCGGCGCCGGGGTGCTGCCGTACG 2880
consensus_13713#1 AGAGGCGGAACGCCGACCACGGCCGGAAGAACCGGTGCGGCGCCGGGGTGCTGCCGTACG 1080
************************************************************
consensus_13713#0 AACTGCTGGCGCCCAGCTCGCCGCCGGGGGTCACCTGCCGCGGCGTGCCCAACAGCATCT 2940
consensus_13713#1 AACTGCTGGCGCCCAGCTCGCCGCCGGGGGTCACCTGCCGCGGCGTGCCCAACAGCATCT 1140
************************************************************
consensus_13713#0 CCATCTGATCTGGCGACATTGCCGATCCATTCATTCCTCTTTGTGTTCTGGATCAATAAT 3000
consensus_13713#1 CCATCTGATCTGGCGACATTGCCGATCCATTCATTCCTCTTTGTGTTCTGGATCAATAAT 1200
************************************************************
consensus_13713#0 TTTAGTAAAATGAATATGAAATAGGAGTATTAATCAGTATCCGTACCCAAGAAA------ 3054
consensus_13713#1 TTTAGTAAAATGAATATGAAATAGGAGTATTAATCAGTAAAAAAAAAAAAAAAAAAAAAA 1260
*************************************** * ** ***
consensus_13713#0 ----------
consensus_13713#1 AAGGCCACAT 1270
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||