These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13793#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 13 consensus length = 2572 fasta sequence [CCGGCGTCGCTGCCGTCGTCTATGCAGGCGGAGGGAAGCAAGCGGCGCGTGAGGAAGCGCGACCCGCGGCTGGTTTGCCCGAACTACCTCGCCGGGAGGGTGCCGTGCGCGTGCCCCGAGATTGACGAGATGGCGGCCGCCTTGGAGGTCGAGGACGTGGCCACAGAGTTGCTGGCAGGGGCGCGGAAGAAGCCGAAGGGTGCCGGCCGTGGTAGTGGTGCGGCAGTCGGCGGAAGTGGTGGAGGGGCTAGCCGTGGGACACCGGCCGAGATGAAGTGCCAGGTGCCTGGTTGTGAGGCGGACATACGTGAGCTGAAGGGATACCACCGCCGGCACAGGGTGTGTTTGCGCTGCGCGCACGCCGCCGCTGTCATGCTTGATGGTGTCCAGAAGCGCTATTGCCAGCAGTGTGGCAAGTTTCATATATTACTAGATTTCGATGAAGATAAAAGGAGTTGTAGAAGGAAATTGGAGCGGCACAACAAAAGAAGACGAAGAAAACCTGATTCCAAAGGCATATTGGAGAAAGATATAGATGACCAGTTGGATTTTTCAGCAGATGGTAGTGGTGATGGTGAACTAAGAGAAGAGAACATAGATGTCACTACCAGTGAGACGCTTGAGACTGTTCTGAGCAATAAGGTTTTGGACAGGGAAACACCTGTGGGTTCCGATGATGTGCTTAGTTCTCCAACATGTGCACAACCCAGTTTGCAAATCGACCAAAGTAAAAGCTTAGTGACTTTCGCTGCTTCTGTTGAAGCCTGCCTTGGCACTAAACAGGAAAACACCAAACTTACCAATTCTCCTGTGCATGACACAAAGAGTACTTACTCATCCTCGTGTCCCACAGGACGTGTATCATTCAAGTTGTACGATTGGAATCCTGCTGAATTTCCTCGACGCTTACGCCACCAAATATTTGAGTGGCTTTCTAGCATGCCTGTTGAACTGGAGGGCTATATTCGTCCTGGTTGTACAATTTTAACTGTATTTGTTGCAATGCCACAACATATGTGGGACAAGTTATCCGAAGACACAGGAAATCTTGTCAAAAGCTTGGTAAATGCTCCAAATAGTCTCCTGTTGGGTAAAGGGGCCTTCTTTATCCATGTCAATAATATGATATTTCAAGTATTGAAAGATGGTGCAACATTGACCAGTACCAGATTAGAGGTACAGTCCCCGAGGATTCACTATGTTCATCCATCATGGTTTGAAGCAGGAAAGCCCATCGATCTTATTCTTTGTGGAAGTTCTCTTGATCAGCCTAAATTCAGGTCACTTGTGTCATTTGATGGACTGTACTTGAAGCATGATTGTCGCCGTATACTGTCACATGAGACCTTTGATTGTATTGGAAGTGGGGAACATATACTTGATTCTCAACATGAAATATTCCGGATAAATATTACCACATCAAAGCTGGATACTCATGGACCCGCATTTGTGGAAGTGGAAAACATGTTTGGGCTATCAAATTTTGTTCCTATCCTTGTTGGTAGCAAGCATTTATGTTCTGAACTAGAGCAGATACATGATGCTCTGTGTGGTTCTTCGGACATAAGTTCTGATCCTTGTGAGCTTCGAGGACTTCGACAGACTGCAATGTTGGGATTCCTCATCGACATTGGATGGCTAATAAGGAAGCCATCCATAGATGAATTTCAAAACCTACTGAGTTTAGCAAATATCCAGAGATGGATATGCATGATGAAATTCCTGATACAGAACGATTTTATCAATGTTCTGGAAATAATAGTGAACTCGTTGGACAACATCATAGGGTCAGAGCTTCTTTCTAACTTGGAAAAGGGTAGACTGGAAAATCATGTAACAGAATTTCTTGGGTATGTAAGCGAAGCTCGAAACATTGTTGATAATAGACCTAAATATGACAAGCAGAGACAGGTTGATACAAGATGGGCAGGTGATTATGCTCCAAACCAGCCAAAGTTGGGCATTTCTGTGCCACTTGCTGAAAGTACTGGAACCAGTGGAGAACATGATTTGCACTCAACCAATGCAGCTTCTGGAGAGGAGGAAAATATGCCTCTAGTGACTAAAGCTCTCCCACACAGGCAATGCTGTCACCCTGAGA-CTAGTGCTAGATGGCTTAACGCTGCCTCCATTGGTGCTTTTCCAGGTGGTGCCATGAGAATGCGTCTTGCCA-CCA-CTGTGGTAATTGGTGCTGTGGTATGTTTTGCAGCTTGTGTTGTCCTTTTCCACCCA-CA-CAGAGTAGGGGTGCTTGCCGCGCCAGTAAAGAGGTACTTGTCTAGGAACTACTCATCATAGTTGAAGCTAGATTAGATTAACCTTCCTGTTGCTTTTCCCCTGTATCATATGCATGTACCTTTCTAATTTGAGGCTTAGCTTGTGCATCCGATGTTCAAATATTTGTAAGAGGACCCA-CAGGCATAAATGCAAATTTTTGCAGCTTTTTTTGGCAAAAAGTATGAGCATATAGTTGCCTGAAGACCTGAACTTCCAG-GTACACACC-AAA-TGTAATAGATGTAATGGTTCAAAGA-C-AGTGATTGGAATTTTTCATGATCTACATACACTAAAAAAAAAA] [+] EMBL AK100057 [CCGGCGTCGCTGCCGTCGTCTATGCAGGCGGAGGGAAGCAAGCGGCGCGTGAGGAAGCGCGACCCGCGGCTGGTTTGCCCGAACTACCTCGCCGGGAGGGTGCCGTGCGCGTGCCCCGAGATTGACGAGATGGCGGCCGCCTTGGAGGTCGAGGACGTGGCCACAGAGTTGCTGGCAGGGGCGCGGAAGAAGCCGAAGGGTGCCGGCCGTGGTAGTGGTGCGGCAGTCGGCGGAAGTGGTGGAGGGGCTAGCCGTGGGACACCGGCCGAGATGAAGTGCCAGGTGCCTGGTTGTGAGGCGGACATACGTGAGCTGAAGGGATACCACCGCCGGCACAGGGTGTGTTTGCGCTGCGCGCACGCCGCCGCTGTCATGCTTGATGGTGTCCAGAAGCGCTATTGCCAGCAGTGTGGCAAGTTTCATATATTACTAGATTTCGATGAAGATAAAAGGAGTTGTAGAAGGAAATTGGAGCGGCACAACAAAAGAAGACGAAGAAAACCTGATTCCAAAGGCATATTGGAGAAAGATATAGATGACCAGTTGGATTTTTCAGCAGATGGTAGTGGTGATGGTGAACTAAGAGAAGAGAACATAGATGTCACTACCAGTGAGACGCTTGAGACTGTTCTGAGCAATAAGGTTTTGGACAGGGAAACACCTGTGGGTTCCGATGATGTGCTTAGTTCTCCAACATGTGCACAACCCAGTTTGCAAATCGACCAAAGTAAAAGCTTAGTGACTTTCGCTGCTTCTGTTGAAGCCTGCCTTGGCACTAAACAGGAAAACACCAAACTTACCAATTCTCCTGTGCATGACACAAAGAGTACTTACTCATCCTCGTGTCCCACAGGACGTGTATCATTCAAGTTGTACGATTGGAATCCTGCTGAATTTCCTCGACGCTTACGCCACCAAATATTTGAGTGGCTTTCTAGCATGCCTGTTGAACTGGAGGGCTATATTCGTCCTGGTTGTACAATTTTAACTGTATTTGTTGCAATGCCACAACATATGTGGGACAAGTTATCCGAAGACACAGGAAATCTTGTCAAAAGCTTGGTAAATGCTCCAAATAGTCTCCTGTTGGGTAAAGGGGCCTTCTTTATCCATGTCAATAATATGATATTTCAAGTATTGAAAGATGGTGCAACATTGACCAGTACCAGATTAGAGGTACAGTCCCCGAGGATTCACTATGTTCATCCATCATGGTTTGAAGCAGGAAAGCCCATCGATCTTATTCTTTGTGGAAGTTCTCTTGATCAGCCTAAATTCAGGTCACTTGTGTCATTTGATGGGCTGTACTTGAAGCATGATTGTCGCCGTATACTGTCACATGAGACCTTTGATTGTATTGGAAGTGGGGAACATATACTTGATTCTCAACATGAAATATTCCGGATAAATATTACCACATCAAAGCTGGATACTCATGGACCCGCATTTGTGGAAGTGGAAAACATGTTTGGGCTATCAAATTTTGTTCCTATCCTTGTTGGTAGCAAGCATTTATGTTCTGAACTAGAGCAGATACATGATGCTCTGTGTGGTTCTTCGGACATAAGTTCTGATCCTTGTGAGCTTCGAGGACTTCGACAGACTGCAATGTTGGGATTCCTCATCGACATTGGATGGCTAATAAGGAAGCCATCCATAGATGAATTTCAAAACCTACTGAGTTTAGCAAATATCCAGAGATGGATATGCATGATGAAATTCCTGATACAGAACGATTTTATCAATGTTCTGGAAATAATAGTGAACTCGTTGGACAACATCATAGGGTCAGAGCTTCTTTCTAACTTGGAAAAGGGTAGACTGGAAAATCATGTAACAGAATTTCTTGGGTATGCAAGCGAAGCTCGAAACATTGTTGATAATAGACCTAAATATGACAAGCAGAGACAGGTTGATACAAGATGGGCAGGTGATTATGCTCCAAACCAGCCAAAGTTGGGCATTTCTGTGCCACTTGCTGAAAGTACTGGAACCAGTGGAGAACATGATTTGCACTCAACCAATGCAGCTTCTGGAGAGGAGGAAAATATGCCTCTAGTGACTAAAGCTCTCCCACACAGGCAATGCTGTCACCCTGAGA CTAGTGCTAGATGGCTTAACGCTGCCTCCATTGGTGCTTTTCCAGGTGGTGCCATGAGAATGCGTCTTGCCA CCA CTGTGGTAATTGGTGCTGTGGTATGTTTTGCAGCTTGTGTTGTCCTTTTCCACCCA CA CAGAGTAGGGGTGCTTGCCGCGCCAGTAAAGAGGTACTTGTCTAGGAACTACTCATCATAGTTGAAGCTAGATTAGATTAACCTTCCTGTTGCTTTTCCCCTGTATCATATGCATGTACCTTTCTAATTTGAGGCTTAGCTTGTGCATCCGATGTTCAAATATTTGTAAGAGGACCCA CAGACATAAATGCAAATTTTTGCAGC ] [+] EMBL CB648210 [ CGGACATACGTGAGCTGAAGGGATACCACCGCCGGCACAGGGTGTGTTTGCGCTGCGCGCACGCCGCCGCTGTCATGCTTGATGGTGTCCAGAAGCGCTATTGCCAGCAGTGTGGCAAGTTTCATATATTACTAGATTTCGATGAAGATAAAAGGAGTTGTAGAAGGAAATTGGAGCGGCACAACAAAAGAAGACGAAGAAAACCTGATTCCAAAGGCATATTGGAGAAAGATATAGATGACCAGTTGGATTTTTCAGCAGATGGTAGTGGTGATGGTGAACTAAGAGAAGAGAACATAGATGTCACTACCAGTGAGACGCTTGAGACTGTTCTGAGCAATAAGGTTTTGGACAGGGAAACACCTGTGGGTTCCGATGATGTGCTTAGTTCTCCAACATGTGCACAACCCAGTTTGCAAATCGACCAAAGTAAAAGCTTAGTGACTTTCGCTGCTTCTGTTGAAGCCTGCCTTGGCACTAAACAGGAAAACACCAAACTTACCAATTCTCCTGTGCATGACACAAAGAGTACTTACTCATCCTCGTGTCCCACAGGACGTGTATCATTCAAGTTGTACGATTGGAATCCTGCTGAATTTCCTCGACGCTTACGCCACCAAATATTTGAGTGGCTTTCTAGCATGCCTGTTGAACTGGAGGGCTATATTCGTCCTGGTTGTACAATTTTAACTGTATTTGTTGCAATGCCACAACATATGTGGGACAAGTTATCCGAAGACACAGGAAATCTTGTCAAAAGCTTGGTAAATGCTCCAAATAGTCT ] [+] EMBL CB676017 [ AGAAGGAAATTGGAGCGGCACAACAAAAGAAGACGAAGAAAACCTGATTCCAAAGGCATATTGGAGAAAGATATAGATGACCAGTTGGATTTTTCAGCAGATGGTAGTGGTGATGGTGAACTAAGAGAAGAGAACATAGATGTCACTACCAGTGAGACGCTTGAGACTGTTCTGAGCAATAAGGTTTTGGACAGGGAAACACCTGTGGGTTCCGATGATGTGCTTAGTTCTCCAACATGTGCACAACCCAGTTTGCAAATCGACCAAAGTAAAAGCTTAGTGACTTTCGCTGCTTCTGTTGAAGCCTGCCTTGGCACTAAACAGGAAAACACCAAACTTACCAATTCTCCTGTGCATGACACAAAGAGTACTTACTCATCCTCGTGTCCCACAGGACGTGTATCATTCAAGTTGTACGATTGGAATCCTGCTGAATTTCCTCGACGCTTACGCCACCAAATATTTGAGTGGCTTTCTAGCATGCCTGTTGAACTGGAGGGCTATATTCGTCCTGGTTGTACAATTTTAACTGTATTTGTTGCAATGCCACAACATATGTGGGACAAGTTATCCGAAGACACAGGAAATCTTGTCAAAAGCTTGGTAAATGCTCCAAATAGTCTCCTGTTGGGTAAAGGGGCCTTCTTTATCCATGTCAATAATATGATATTTCAAGTATTGAAAGATGGTGCAACATTGACCAGTACCAGATTAGAGGTACAGTCCCCGAGGATTCACTATGTTCATCCATCATGGTTTGAAGCAGGAAAGCCCATCG ] [+] EMBL CF197231 [ CAATAAGGTTTTGGACAGGGAAACACCTGTGGGTTCCGATGATGTGCTTAGTTCTCCAACATGTGCACAACCCAGTTTGCAAATCGACCAAAGTAAAAGCTTAGTGACTTTTGCTGCTTCTGTTGAAGCCTGCCTTGGCACTAAACAGGAAAACACCAAACTTACCAATTCTCCTGTGCATGACACAAAGAGTACTTACTCATCCTCGTGTCCCACAGGACGTGTATCATTCAAGTTGTACGATTGGAATCCTGCTGAATTTCCTCGACGCTTACGCCACCAAATATTTGAGTGGCTTTCTAGCATGCCTGTTGAACTGGAGGGCTATATTCGTCCTGGTTGTACAATTTTAACTGTATTTGTTGCAATGCCACAACATATGTGGGACAAGTTATCCGAAGACACAGGAAATCTTGTCAAAAGCTTGGTAAATGCTCCAAATAGTCTCCTGTTGGGTAANNNNNNNTTCTTTATCCATGTCAATAATATGATATTTCAAGTATTGAANNNTNNTGCAACATT ] [+] EMBL CB678648 [ CTCGACCCTTACGCCACCAAATATTTGAGTGGCTTTCTAGCATGCCTGTTGAACTGGAGGGCTATATTCGTCCTGGTTGTACAATTTTAACTGTATTTGTTGCAATGCCACAACATATGTGGGACAAGTTATCCGAAGACACAGGAAATCTTGTCAAAAGCTTGGTAAATGCTCCAAATAGTCTCCTGTTGGGTAAAGGGGCCTTCTTTATCCATGTCAATAATATGATATTTCAAGTATTGAAAGATGGTGCAACATTGACCAGTACCAGATTAGAGGTACAGTCCCCGAGGATTCACTATGTTCATCCATCATGGTTTGAAGCAGGAAAGCCCATCGATCTTATTCTTTGTGGAAGTTCTCTTGATCAGCCTAAATTCAGGTCACTTGTGTCATTTGATGGACTGTACTTGAAGCATGATTGTCGCCGTATACTGTCACATGAGACCTTTGATTGTATTGGAAGTGGGGAACATATACTTGATTCTCAACATGAAATATTCCGGATAAATATTACCACATCAAAGCTGGATACTCATGGACCCGCATTTGTGGAAGTGGAAAACATGTTTGGGCTATCAAATTTTGTTCCTATCCTTGTTGGTAGCAAGCATTTATGTTCTGAACTAGAGCAGATACATGATGCTCTGTGTGGTTCTTCGGACATAAGTTCTGATCCTTGTGAGCTTCGAGGACTTCGACAGACTGCAATGTTGGGATTCCTCATCGACATTGGATGGCTAATAAGGAAGCCATCCATAGATGAATTT ] [+] EMBL CB624161 [ TCTATCATGCCTGTTGAACTGGAGGGCTATATTCGTCCTGGTTGTACAATTTTAACTGTATTTGTTGCAATGCCACAACATATGTGGGACAAGTTATCCGAAGACACAGGAAATCTTGTCAAAAGCTTGGTAAATGCTCCAAATAGTCTCCTGTTGGGTAAAGGGGCCTTCTTTATCCATGTCAATAATATGATATTTCAAGTATTGAAAGATGGTGCAACATTGACCAGTACCAGATTAGAGGTACAGTCCCCGAGGATTCACTATGTTCATCCATCATGGTTTGAAGCAGGAAAGCCCATCGATCTTATTCTTTGTGGAAGTTCTCTTGATCAGCCTAAATTCAGGTCACTTGTGTCATTTGATGGACTGTACTTGAAGCATGATTGTCGCCGTATACTGTCACATGAGACCTTTGATTGTATTGGAAGTGGGGAACATATACTTGATTCTCAACATGAAATATTCCGGATAAATATTACCACATCAAAGCTGGATACTCATGGACCCGCATTTGTGGAAGTGGAAAACATGTTTGGGCTATCAAATTTTGTTCCTATCCTTGTTGGTAGCAAGCATTTATGTTCTGAACTAGAGCAGATACATGATGCTCTGTGTGGTTCTTCGGACATAAGTTCTGATCCTTGTGAGCTTCGAGGACTTCGACAGACTGCAATGTTGGGATTCCTCATCGACATTGGATGGCTAATAAGGAAGCCATCCATAGATGAATTTCAAAACC ] [-] EMBL CB669585 [ ATATGCATGATGAAATTCCTGATACAGAACGATTTTATCAATGTTCTGGAAATAATAGTGAACTCGTTGGACAACATCATAGGGTCAGAGCTTCTTTCTAACTTGGAAAAGGGTAGACTGGAAAATCATGTAACAGAATTTCTTGGGTATGTAAGCGAAGCTCGAAACATTGTTGATAATAGACCTAAATATGACAAGCAGAGACAGGTTGATACAAGATGGGCAGGTGATTATGCTCCAAACCAGCCAAAGTTGGGCATTTCTGTGCCACTTGCTGAAAGTACTGGAACCAGTGGAGAACATGATTTGCACTCAACCAATGCAGCTTCTGGAGAGGAGGAAAATATGCCTCTAGTGACTAAAGCTCTCCCACACAGGCAATGCTGTCACCCTGAGA CTAGTGCTAGATGGCTTAACGCTGCCTCCATTGGTGCTTTTCCAGGTGGTGCCATGAGAATGCGTCTTGCCA CCA CTGTGGTAATTGGTGCTGTGGTATGTTTTGCAGCTTGTGTTGTCCTTTTCCACCCA CA CAGAGTAGGGGTGCTTGCCGCGCCAGTAAAGAGGTACTTGTCTAGGAACTACTCATCATAGTTGAAGCTAGATTAGATTAACCTTCCTGTTGCTTTTCCCCTGTATCATATGCATGTACCTTTCTAATTTGAGGCTTAGCTTGTGCATCCGATGTTCAAATATTTGTAAGAGGACCCA CAGGCATAAATGCAAATTTTTGCAGCTTTTTTTGGCAAAAAGTATGAGCATATAGTTGCCTGAAGACCTGAACTTCCAG GTACACACC AAA TGTAATAGATGTAATGG ] [-] EMBL CB648211 [ AGGGTCAGAGCTTCTTTTTAACTTGGAAAAGGGTAGACTGGAAAATCATGTAACAGAATTTCTTGGGTATGTAAGCGAAGCTCGAAACATTGTTGATAATAGACCTAAATATGACAAGCAGAGACAGGTTGATACAAGATGGGCAGGTGATTATGCTCCAAACCAGCCAAAGTTGGGCATTTCTGTGCCACTTGCTGAAAGTACTGGAACCAGTGGAGAACATGATTTGCACTCAACCAATGCAGCTTCTGGAGAGGAGGAAAATATGCCTCTAGTGACTAAAGCTCTCCCACACAGGCAATGCTGTCACCCTGAGA CTAGTGCTAGATGGCTTAACGCTGCCTCCATTGGTGCTTTTCCAGGTGGTGCCATGAGAATGCGTCTTGCCA CCA CTGTGGTAATTGGTGCTGTGGTATGTTTTGCAGCTTGTGTTGTCCTTTTCCACCCA CA CAGAGTAGGGGTGCTTGCCGCGCCAGTAAAGAGGTACTTGTCTAGGAACTACTCATCATAGTTGAAGCTAGATTAGATTAACCTTCCTGTTGCTTTTCCCCTGTATCATATGCATGTACCTTTTTAATTTGAGGCTTAGCTTGTGCATCCGATGTTCAAATATTTGTAAGAGGACCCA CAGGCATAAATGCAAATTTTTGCAGCTTTTTTTGGCAAAAAGTATGAGCATATAGTTGCCTGAAGACCTGAACTTCCAG GTACACACC AAA TGTAATAGATGTAATGGTTCAAAGACC AGTGATTGGAATTTTTC ] [-] EMBL CA761230 [ GAGCTTCTTTCTAACTTGGAAAAGGGTAGGCTGGAAAATCATGTAACAGAATTTCTTGGGTATGTAAGCGAAGCTCGAAACATTGTTGATAATAGACCTAAATATGACAAGCAGAGACAGGTTGATACAAGATGGGCAGGTGATTATGCTCCAAACCAGCCAAAGTTGGGCATTTCTGTGCCACTTGCTGAAAGTACTGGAACCAGTGGAGAACATGATTTGCACACAACCAATGCAGCTTCTGGAGAGGAGGAAAATATGCCTCCAGTGACTAAAGCTCTCCCACACAGGCAATGCTGTCACCCTGAGA CTAGTGCTAGATGGCTTAACGCTGCCTCCATTGGTGCTTTTCCAGGTGGTGCCATGAGAATGCGTCTTGCCA CCA CTGTGGTAATTGGTGCTGTGGTATGTTTTGCAGCTTGTGTTGTCCTTTTCCACCCA CA CAGAGTAGGGGTGCTTGCCGCGCCAGTAAAGAGGTACTTGTCTAGGAACTACTCATCATAGTTGAAGCTAGATTAGATTAACCTTCCTGTTGCTTTTCCCCTGTATCATATGCATGTACCTTTCTAATTTGAGGCTTAGCTTGTGCATCCGATGTTCAAATATTTGTAAGAGGACCCA CAGGCATAAATGCAAATTTTTGCAG TTTTTTTGGCAAAAAaaaaaaa ] [-] EMBL CA761711 [ GAGCTTCTTTCTAACTTGGAAAAGGGTAGGCTGGAAAATCATGTAACAGAATTTCTTGGGTATGTAAGCGAAGCTCGAAACATTGTTGATAATAGACCTAAATATGACAAGCAGAGACAGGTTGATACAAGATGGGCAGGTGATTATGCTCCAAACCAGCCAAAGTTGGGCATTTCTGTGCCACTTGCTGAAAGTACTGGAACCAGTGGAGAACATGATTTGCACACAACCAATGCAGCTTCTGGAGAGGAGGAAAATATGCCTCCAGTGACTAAAGCTCTCCCACACAGGCAATGCTGTCACCCTGAGA CTAGTGCTAGATGGCTTAACGCTGCCTCCATTGGTGCTTTTCCAGGTGGTGCCATGAGAATGCGTCTTGCCA CCA CTGTGGTAATTGGTGCTGTGGTATGTTTTGCAGCTTGTGTTGTCCTTTTCCACCCA CA CAGAGTAGGGGTGCTTGCCGCGCCAGTAAAGAGGTACTTGTCTAGGAACTACTCATCATAGTTGAAGCTAGATTAGATTAACCTTCCTGTTGCTTTTCCCCTGTATCATATGCATGTACCTTTCTAATTTGAGGCTTAGCTTGTGCATCCGATGTTCAAATATTTGTAAGAGGACCCA CAGGCATAAATGCAAATTTTTGCAG TTTTTTTGGCAAAAAaaaaaaa ] [-] EMBL CB624162 [ TGGAAAATCATGTAACAGAATTTCTTGGGTATGTAAGCGAAGCTCGAAACATTGTTGATAATAGACCTAAATATGACAAGCAGAGACAGGTTGATACAAGATGGGCAGGTGATTATGCTCCAAACCAGCCAAAGTTGGGCATTTTTGTGCCACTTGTTGTAAGTACTGGAACCAGTGGAGAACATGATTTGCACACATCCAATGCAGCTTCTGGAGAGGAGGAAAATATGCCTCTAGTGACTAAAGCTCTCCCACACAGGCAATGCTGTCACCCTGAGATCTAGTGTTAGATGGCTTAACGCTGCCTCCATTGGTGCTTTTCCAGGTGGTGCCATGAGAATGCGTCTTGCCA CCA CTGTGGTAATTGGTGCTGTGGTATGTTTTGCAGCTTGTGTTGTCCTTTTCCACCCA CA CAGAGTAGGGGTGCTTGCCGCGCCAGTAAAGAGGTACTTGTGTAGGAACTCCTCATCATAGTTGAAGCTAGATTAGATTAACCTTCCTGTTGCTTTTCCCCTGTATCATATGCATGTCCCTTTGTAATTTGAGGCTTAGATTGTGCATCCGATGTTCAAATATTTCTAAGAGGACCCA CAGGCATAAATGCAAATTTTTGCAGCTTTTTTTGGCAAAAAGTATGAGCATATAGTTGCCTGAAGACCTGAACTTGCAGCGTACACACCTAAACTGTAATAGATGTAATGGTTCAAAGA CGAGTGATTGGAATTTTTCATGATCTA ] [-] EMBL CB637426 [ GTTGATACAAGATGGGCAGGTGATTATGATCCAAACCAGCCAAAGTTGGGCATTTCTGTGCCACTTGCTGAAAGTACTGGAACCAGTGGAGAACATGATTTGCACTCAACCAATGCAGCTTCTGGAGAGGAGGAAAATATGCCTCTAGTGACTAAAGCTCTCCCACACAGGCAATGCTGTCACCCTGAGA CTAGTGCTAGATGGCTTAACGCTGCCTCCATTGGTGCTTTTCCAGGTGGTGCCATGAGAATGCGTCTTGCCA CCA CTGTGGTAATTGGTGCTGTGGTATGTTTTGCAGCTTGTGTTGTCCTTTTCCACCCA CA CAGAGTAGGGGTGCTTGCCGCGCCAGTAAAGAGGTACTTGTCTAGGAACTACTCATCATAGTTGAAGCTAGATTAGATTAACCTTCCTGTTGCTTTTCCCCTGTATCATATGCATGTACCTTTCTAATTTGAGGCTTAGCTTGTGCATCCGATGTTCAAATATTTGTAAGAGGACCCA CAGGCATAAATGCAAATTTTTGCAGCTTTTTTTGGCAAAAAGTATGAGCATATAGTTGCCTGAAGACCTGAACTTCCAG GTACACACC AAA TGTAATAGATGTAATGGTTCAAAGA C AGTGATTGGAATATTTCt ] [+] EMBL BM421186 [ ATGCTGTCCCCCTGAGA CTAGTGCTAGATGGCTTAACGCTGCCTCCATTGGTGCTTTTCCAGGTGGT CCATGAGAATGCGTCTTGCCACCCACCTGTGGTAATTGGTGCTGTGGTATGTTTTGCAGCTTGTGTTGTCCTTTTCCACCCACCACCAGAGTAGGGGTGCTTGCCGCGCCAGTAAAGAGGTACTTGTCTAGGAACTACTCATCATAGTTGAAGCTAGATTAGATTAACCTTCCTGTTGCTTTTCCCCTGTATCATATGCATGTACCTTTCTAATTTGAGGCTTAGCTTGTGCATCCGATGTTCAAATATTTGTAAGAGGACCCACCAGGCATAAATGCAAATTTTTGCAGCTTTTTTTGGCAAAAAGTATGAGCATATAGTTGCCTGAAGACCTGAACTTCCAG GTACACACC CAA TGTAATAGATGTAATGGTTCAAAGA C AGTGATTGGAATTTTTCATGATCTACATACACTAAAAAAAAAA] consensusID : consensus_13793#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 507 fasta sequence [AAGTGGTGGAGGGGCTAGCCGTGGGACACCGGCCGAGATGAAGTGCCAGGTGCCTGGTTGTGAGGCGGACATACGTGAGCTGAAGGGATACCACCGCCGGCACAGGGTGTGTTTGCGCTGCGCGCACGCCGCCGCTGTCATGCTTGATGGTGTCCAGAAGCGCTATTGCCATCAGTGTGGCAAAATCAGTTTGTTACTGATGGATGGTCGCTAAACTTTCTAAAAATTGCATGCCAAGCTCATTTGCAATAAAGCTAAGTCTTTTATTTCCAAATCAAATTCATATTTAAAGTTTGATTAATCTCATAAACTAAGGAACATCCTGCTTTAATGCATAAATTTTCTTGTATGTTTTTGACATGACGTAAGGTCACTGATCAAACAAACTGCAAGCATGGAAGTACCTCTGTCCTTGTGCATCTGTCCACAACCTGTTGGCCACTTGATATATTTTTGAAACATTACTTTAGCAATTGATCAAAATTCTTTGCCTAGCTCGAGGTACTA] [+] EMBL CB637425 [AAGTGGTGGAGGGGCTAGCCGTGGGACACCGGCCGAGATGAAGTGCCAGGTGCCTGGTTGTGAGGCGGACATACGTGAGCTGAAGGGATACCACCGCCGGCACAGGGTGTGTTTGCGCTGCGCGCACGCCGCCGCTGTCATGCTTGATGGTGTCCAGAAGCGCTATTGCCATCAGTGTGGCAAAATCAGTTTGTTACTGATGGATGGTCGCTAAACTTTCTAAAAATTGCATGCCAAGCTCATTTGCAATAAAGCTAAGTCTTTTATTTCCAAATCAAATTCATATTTAAAGTTTGATTAATCTCATAAACTAAGGAACATCCTGCTTTAATGCATAAATTTTCTTGTATGTTTTTGACATGACGTAAGGTCACTGATCAAACAAACTGCAAGCATGGAAGTACCTCTGTCCTTGTGCATCTGTCCACAACCTGTTGGCCACTTGATATATTTTTGAAACATTACTTTAGCAATTGATCAAAATTCTTTGCCTAGCTCGAGGTACTA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_13793#0 CCGGCGTCGCTGCCGTCGTCTATGCAGGCGGAGGGAAGCAAGCGGCGCGTGAGGAAGCGC 60 consensus_13793#1 ------------------------------------------------------------ consensus_13793#0 GACCCGCGGCTGGTTTGCCCGAACTACCTCGCCGGGAGGGTGCCGTGCGCGTGCCCCGAG 120 consensus_13793#1 ------------------------------------------------------------ consensus_13793#0 ATTGACGAGATGGCGGCCGCCTTGGAGGTCGAGGACGTGGCCACAGAGTTGCTGGCAGGG 180 consensus_13793#1 ------------------------------------------------------------ consensus_13793#0 GCGCGGAAGAAGCCGAAGGGTGCCGGCCGTGGTAGTGGTGCGGCAGTCGGCGGAAGTGGT 240 consensus_13793#1 -----------------------------------------------------AAGTGGT 7 ******* consensus_13793#0 GGAGGGGCTAGCCGTGGGACACCGGCCGAGATGAAGTGCCAGGTGCCTGGTTGTGAGGCG 300 consensus_13793#1 GGAGGGGCTAGCCGTGGGACACCGGCCGAGATGAAGTGCCAGGTGCCTGGTTGTGAGGCG 67 ************************************************************ consensus_13793#0 GACATACGTGAGCTGAAGGGATACCACCGCCGGCACAGGGTGTGTTTGCGCTGCGCGCAC 360 consensus_13793#1 GACATACGTGAGCTGAAGGGATACCACCGCCGGCACAGGGTGTGTTTGCGCTGCGCGCAC 127 ************************************************************ consensus_13793#0 GCCGCCGCTGTCATGCTTGATGGTGTCCAGAAGCGCTATTGCCAGCAGTGTGGCAAGTTT 420 consensus_13793#1 GCCGCCGCTGTCATGCTTGATGGTGTCCAGAAGCGCTATTGCCATCAGTGTGGCAAAATC 187 ******************************************** *********** * consensus_13793#0 CATATATTACTAGATTTCGATGAAGATAAAAGGAGTTGTAGAAGGAAATTGGAGCGGCAC 480 consensus_13793#1 AGTTTGTTACTGA---TGGATGGTCGCTAAACT--TTCTAAA----AATTG------CAT 232 * * ***** * **** *** ** ** * ***** ** consensus_13793#0 AACAAAAGAAGACGAAGAAAACCTGATTCCAAAGGCATATTGGAGAAAGATATAGATGAC 540 consensus_13793#1 GCCAAGCTCATTTGCAATAAAGCTAAGTCTTT---TATTTCCAAATCAAATTCATATTTA 289 *** * * * *** ** * ** ** * * * ** * ** consensus_13793#0 CAGTTGGATTTTTCAGCAGATGGTAGTGGTGATGGTGAACTAAGAGAAGAGAACATAGAT 600 consensus_13793#1 AAGTTTGATTAATCT-CATAAACTAAGGAACATCCTGCTTTAATGCATAAATTTTCTTGT 348 **** **** ** ** * ** * ** ** *** * * * consensus_13793#0 GTCACTACCAGTGAGACGCTTGAGACTGTTCTGAGCAATAAGGTTTTGGACAGGGAAACA 660 consensus_13793#1 AT-GTTTTTGACATGACG--TAAGGTCA--CTGATCAAACAAACTGCAAGCATGGAAGTA 403 * * **** * ** **** *** * * ** **** * consensus_13793#0 CCTGTGGGTTCCGATGATGTGCTTAGTTCTCCAACATGTGCACAACCCAGTTTGCAAATC 720 consensus_13793#1 CCTCTGTCCT-------TGTGCATCTGTCCACAACCTGTTGGCCACTTGATATATTT--- 453 *** ** * ***** * ** **** *** * ** * * consensus_13793#0 GACCAAAGTAAAAGCTTAGTGACTTTCGCTGCTTCTGTTGAAGCCTGCCTTG--GCACTA 778 consensus_13793#1 --TTGAAACATTACTTTAGCAATTGATCAAAATTCTTT----GCCTAGCTCGAGGTACTA 507 ** * * **** * * **** * **** ** * * **** consensus_13793#0 AACAGGAAAACACCAAACTTACCAATTCTCCTGTGCATGACACAAAGAGTACTTACTCAT 838 consensus_13793#1 ------------------------------------------------------------ consensus_13793#0 CCTCGTGTCCCACAGGACGTGTATCATTCAAGTTGTACGATTGGAATCCTGCTGAATTTC 898 consensus_13793#1 ------------------------------------------------------------ consensus_13793#0 CTCGACGCTTACGCCACCAAATATTTGAGTGGCTTTCTAGCATGCCTGTTGAACTGGAGG 958 consensus_13793#1 ------------------------------------------------------------ consensus_13793#0 GCTATATTCGTCCTGGTTGTACAATTTTAACTGTATTTGTTGCAATGCCACAACATATGT 1018 consensus_13793#1 ------------------------------------------------------------ consensus_13793#0 GGGACAAGTTATCCGAAGACACAGGAAATCTTGTCAAAAGCTTGGTAAATGCTCCAAATA 1078 consensus_13793#1 ------------------------------------------------------------ consensus_13793#0 GTCTCCTGTTGGGTAAAGGGGCCTTCTTTATCCATGTCAATAATATGATATTTCAAGTAT 1138 consensus_13793#1 ------------------------------------------------------------ consensus_13793#0 TGAAAGATGGTGCAACATTGACCAGTACCAGATTAGAGGTACAGTCCCCGAGGATTCACT 1198 consensus_13793#1 ------------------------------------------------------------ consensus_13793#0 ATGTTCATCCATCATGGTTTGAAGCAGGAAAGCCCATCGATCTTATTCTTTGTGGAAGTT 1258 consensus_13793#1 ------------------------------------------------------------ consensus_13793#0 CTCTTGATCAGCCTAAATTCAGGTCACTTGTGTCATTTGATGGACTGTACTTGAAGCATG 1318 consensus_13793#1 ------------------------------------------------------------ consensus_13793#0 ATTGTCGCCGTATACTGTCACATGAGACCTTTGATTGTATTGGAAGTGGGGAACATATAC 1378 consensus_13793#1 ------------------------------------------------------------ consensus_13793#0 TTGATTCTCAACATGAAATATTCCGGATAAATATTACCACATCAAAGCTGGATACTCATG 1438 consensus_13793#1 ------------------------------------------------------------ consensus_13793#0 GACCCGCATTTGTGGAAGTGGAAAACATGTTTGGGCTATCAAATTTTGTTCCTATCCTTG 1498 consensus_13793#1 ------------------------------------------------------------ consensus_13793#0 TTGGTAGCAAGCATTTATGTTCTGAACTAGAGCAGATACATGATGCTCTGTGTGGTTCTT 1558 consensus_13793#1 ------------------------------------------------------------ consensus_13793#0 CGGACATAAGTTCTGATCCTTGTGAGCTTCGAGGACTTCGACAGACTGCAATGTTGGGAT 1618 consensus_13793#1 ------------------------------------------------------------ consensus_13793#0 TCCTCATCGACATTGGATGGCTAATAAGGAAGCCATCCATAGATGAATTTCAAAACCTAC 1678 consensus_13793#1 ------------------------------------------------------------ consensus_13793#0 TGAGTTTAGCAAATATCCAGAGATGGATATGCATGATGAAATTCCTGATACAGAACGATT 1738 consensus_13793#1 ------------------------------------------------------------ consensus_13793#0 TTATCAATGTTCTGGAAATAATAGTGAACTCGTTGGACAACATCATAGGGTCAGAGCTTC 1798 consensus_13793#1 ------------------------------------------------------------ consensus_13793#0 TTTCTAACTTGGAAAAGGGTAGACTGGAAAATCATGTAACAGAATTTCTTGGGTATGTAA 1858 consensus_13793#1 ------------------------------------------------------------ consensus_13793#0 GCGAAGCTCGAAACATTGTTGATAATAGACCTAAATATGACAAGCAGAGACAGGTTGATA 1918 consensus_13793#1 ------------------------------------------------------------ consensus_13793#0 CAAGATGGGCAGGTGATTATGCTCCAAACCAGCCAAAGTTGGGCATTTCTGTGCCACTTG 1978 consensus_13793#1 ------------------------------------------------------------ consensus_13793#0 CTGAAAGTACTGGAACCAGTGGAGAACATGATTTGCACTCAACCAATGCAGCTTCTGGAG 2038 consensus_13793#1 ------------------------------------------------------------ consensus_13793#0 AGGAGGAAAATATGCCTCTAGTGACTAAAGCTCTCCCACACAGGCAATGCTGTCACCCTG 2098 consensus_13793#1 ------------------------------------------------------------ consensus_13793#0 AGACTAGTGCTAGATGGCTTAACGCTGCCTCCATTGGTGCTTTTCCAGGTGGTGCCATGA 2158 consensus_13793#1 ------------------------------------------------------------ consensus_13793#0 GAATGCGTCTTGCCACCACTGTGGTAATTGGTGCTGTGGTATGTTTTGCAGCTTGTGTTG 2218 consensus_13793#1 ------------------------------------------------------------ consensus_13793#0 TCCTTTTCCACCCACACAGAGTAGGGGTGCTTGCCGCGCCAGTAAAGAGGTACTTGTCTA 2278 consensus_13793#1 ------------------------------------------------------------ consensus_13793#0 GGAACTACTCATCATAGTTGAAGCTAGATTAGATTAACCTTCCTGTTGCTTTTCCCCTGT 2338 consensus_13793#1 ------------------------------------------------------------ consensus_13793#0 ATCATATGCATGTACCTTTCTAATTTGAGGCTTAGCTTGTGCATCCGATGTTCAAATATT 2398 consensus_13793#1 ------------------------------------------------------------ consensus_13793#0 TGTAAGAGGACCCACAGGCATAAATGCAAATTTTTGCAGCTTTTTTTGGCAAAAAGTATG 2458 consensus_13793#1 ------------------------------------------------------------ consensus_13793#0 AGCATATAGTTGCCTGAAGACCTGAACTTCCAGGTACACACCAAATGTAATAGATGTAAT 2518 consensus_13793#1 ------------------------------------------------------------ consensus_13793#0 GGTTCAAAGACAGTGATTGGAATTTTTCATGATCTACATACACTAAAAAAAAAA 2572 consensus_13793#1 ------------------------------------------------------ |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||