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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13839#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1439 fasta sequence
[ACTGACTG-AGGAGT-GAAAAATTCCACGCCTTC------T--TCTTCCTCTCCCTCTTCCCTACCAAGCGAGACCACTCGGCCCCCACAAAAT-CTCCGCTTCTTCTCCGAGACCGAGATGGCACTCGACTCTGTTCCATCCTACCCCAGCGATCTTGGATCCAGCAGGGCCAGGACGCCGCAGCAGCAAAGGGTCAGCCCCAGGAAGGAGGAGCGGACATGGACGACCGACACCTACGCGCCGTACGACGACGGCCACCAGTGGAGGAAGTACGGCGAGAAGAAACTCTCCAATTCCAACTTCCCAAGGTTCTATTACAGATGCACCTACAAGAATGACATGAAGTGCCCTGCTACGAAGCAAGTCCAGCAGAAGGACACTAATGATCCACCATTGTTCTCAGTCACTTACTTCAACCACCACACCTGCAACAGCAGCTCAAAGATCGTAGGCAGCACTCCTGATTCTACTGTGCAGTCGAGGAAAGCCATTTCGATCTGCTTCAATTCACATGGCCAAACCGGTGAACAGCCCACATTCTTGTCATCATCAGCTTCCTTGTTGTCACCGAGCATGCAGTCGTACAGTTCCAACCAGCAACCTGACATGAACACCTACAGTCGCCAGTTTCAGTGGGCAGACACATCGTCATCTACAAGCAAT-GCTCCGGTTAAGATGGAGGCGGACGATTATGCAGAAGCAAGTGCTTCACCCAGTACCACTGGTGCTCTGTCGAGGACATTGCTGCCGATCGGTCAGTCAAGATGCATCGAGTATTTCCATTTCTTGTGATGATTTTTATGGAAAGTGAAGGAGATGCATATACATTCTGAGGAGCCTCTTGGATGGTTCCAGATAGGGTTTTATATTGGGAGGTGAGGATGTTGTGCTGATGAGATTCCATATACTATAGTGGCATTATGTTGTTTTCTTCTTTGCATGTAGATTCAAGCCAGATTTTTGTGCTTGAATGATGTAAAGAACTGAATTGGCGTTTCTCTATCTAGTAGGAAGGAGTACGTGATACAGAAAAAGGCAAATGTAGCAGAACCTGTTAAATTATACTAGTATAAAATTAAGGAAAAATCTGACAGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCTTGTTTGCCCTTTCCTAACAAAGGGGAAATTCCGGGCCCTTAAAATAAATTCCCCCTTAAGGGGAGTGTTTTAAAAATAAAGGGCCCGGGTTTAAAAAACGTGGAAATGGAAAAACCCTGGGGTTACCCAAATTAAATCCCTTGGAAAAAAATCCCCTTTTCCCAAGGGGGGAAAAAAAAAAAAAGCCCCAACCAAATCCCCTTTCCAAAAATTGGCCCACCTTATCCTACGGGAGTTTAAGGGTTAACCCTTAAAA]
[+] EMBL CF278237 [ACTGACTG AGGAGT GAAAAATTCCACGCCTTC T TCTTCCTCTCCCTCTTCCCTACCAAGCGAGACCACTCGGCCCCCACAAAAT CTCCGCTTCTTCTCCGAGACCGAGATGGCACTCGACTCTGTTCCATCCTACCCCAGCGATCTTGGATCCAGCAGGGCCAGGACGCCGCAGCAGCAAAGGGTCAGCCCCAGGAAGGAGGAGCGGACATGGACGACCGACACCTACGCGCCGTACGACGACGGCCACCAGTGGAGGAAGTACGGCGAGAAGAAACTCTCCAATTCCAACTTCCCAAGGTTCTATTACAGATGCACCTACAAGAATGACATGAAGTGCCCTGCTACGAAGCAAGTCCAGCAGAAGGACACTAATGATCCACCATTGTTCTCAGTCACTTACTTCAACCACCACACCTGCAACAGCAGCTCAAAGATCGTAGGCAGCACTCCTGATTCTACTGTGCAGTCGAGGAAAGCCATTTCGATCTGCTTCAATTCACATGGCCAAACCGGTGAACAGCCCACATTCTTGTCATCATCAGCTTCCTTGTTGTCACCGAGCATGCAGTCGTACAGTTCCAACCAGCAACCTGACATGAACACCTACAGTCGCCAGTTTCAGTGGGCAGACACATCGTCATCTACAAGCA ]
[+] EMBL CF319508 [ CTGAAGGAGTAGAAAAATTCCCCGCCTTCCTTTCTTCCTCTTCCTCTCCCTCTTCCCTACCAAGCGAGACCACTCGGCCCCCACAAAATCCTCCGCTTCTTCTCCGAGACCGAGATGGCACTCGACTCTGTTCCATCCTACCCCAGCGATCTTGGATCCAGCAGGGCCAGGACGCCGCAGCAGCAAAGGGT CAGGAAGGAGGAGCGGACATGGACGACCGACACCTACGCGCCGTACGACGACGGCCACCAGTGGAGGAAGTACGGCGAGAAGAAACTCTCCAATTCCAACTTCCCAAGGTTCTATTACAGATGCACCTACAAGAATGACATGAAGTGCCCTGCTACGAAGCAAGTCCAGCAGAAGGACACTAATGATCCACCATTGTTCTCAGTCACTTACTTCAACCACCACACCTGCAACAGCAGCCCAAAGATCGTAGGCAGCACTCCTGATTCTACTGTGCAGTCGAGGAAAGCCATTTCGATCTGCTTCAATTCACATGGCAAAACCGGTGAACTGCCCACATTCTTGTCACCATCAGCTTCATTGTTGTCGCCGAGCATGCAGCCGTACAGTTCCAACCAGCAACCTGACATGAACACCTACAGTCGCCAGTTTCATTGGGCAGACACATCGTCATCTA ]
[+] EMBL AK073243 [ TC T TCTTCCTCTCCCTCTTCCCTACCAAGCGAGACCACTCGGCCCCCACAAAAT CTCCGCTTCTTCTCCGAGACCGAGATGGCACTCGACTCTGTTCCATCCTACCCCAGCGATCTTGGATCCAGCAGGGCCAGGACGCCGCAGCAGCAAAGGGTCAGCCCCAGGAAGGAGGAGCGGACATGGACGACCGACACCTACGCGCCGTACGACGACGGCCACCAGTGGAGGAAGTACGGCGAGAAGAAACTCTCCAATTCCAACTTCCCAGGGTTCTATTACAGATGCACCTACAAGAATGACATGAAGTGCCCTGCTACGAAGCAAGTCCAGCAGAAGGACACTAATGATCCACCATTGTTCTCAGTCACTTACTTCAACCACCACACCTGCAACAGCAGCTCAAAGATCGTAGGCAGCACTCCTGATTCTACTGTGCAGTCGAGGAAAGCCATTTCGATCTGCTTCAATTCACATGGCCAAACCGGTGAACAGCCCACATTCTTGTCATCATCAGCTTCCTTGTTGTCACCGAGCATGCAGTCGTACAGTTCCAACCAGCAACCTGACATGAACACCTACAGTCGCCAGTTTCAGTGGGCAGACACATCGTCATCTACAAGCAAT GCTCCGGTTAAGATGGAGGCGGACGATTATGCAGAAGCAAGTGCTTCACCCAGTACCACTGGTGCTCTGTCGAGGACATTGCTGCCGATCGGTCAGTCAAGATGCATCGAGTATTTCCATTTCTTGTGATGATTTTTATGGAAAGTGAAGGAGATGCATATACATTCTGAGGAGCCTCTTGGATGGTTCCAGATAGGGTTTTATATTGGGAGGTGAGGATGTTGTGCTGATGAGATTCCATATACTATAGTGGCATTATGTTGTTTTCTTCTTTGCATGTAGATTCAAGCCAGATTTTTGTGCTTGAATGATGTAAAGAACTGAATTGGCGTTTCTCTATCTAGTAGGAAGGAGTACGTGATACAGAAAAAGGCAAATGTAGCAGAACCTGTTAAATTATACTAGTATAAAATTAAGGAAAA ]
[+] EMBL CA755335 [ TTCCCTACCAAGCGAGACCACTCGGCCCCCACAAAAT CTCCGCTTCTTCTCCGAGACCGAGATGGCACTCGACTCTGTTCCATCCTACCCCAGCGATCTTGGATCCAGCAGGGCCAGGACGCCGCAGCAGCAAAGGGTCAGCCCCAGGAAGGAGGAGCGGACATGGACGACCGACACCTACGCGCCGTACGACGACGGCCACCAGTGGAGGAAGTACGGCGAGAAGAAACTCTCCAATTCCAACTTCCCAAGGTTCTATTACAGATGCACCTACNAGAATGACATGAAGTGCCCTGCTACGAAGCAAGTCCAGCAGAAGGACACTAATGATCCACCATTGTTCTCAGTCACTTACTTCAACCACCACACCTGCAACAGCAGCTCANAGATCGTAGGCAGCACTCCTGATTCTACTGTGCAGTCGAGGANAGCCATTTCGATCTGCTTCAATTCACATGGNCAAACCGGTGAACAGCCCACATTCTTGTCATCATCAGCTTCCTTGTTGTCACCGAGCATGCAGTCGTACAGTTCCNACCAGCAACCTGACATGAACACCTACNGTCGCCAGTTTCAGTGGGCAGACACATCGTCATCTACNAGCCATGGCTC ]
[-] EMBL CF278238 [ CTCCGGTTAAGATGGAGGCGGACGATTATGCAGAAGCAAGTGCTTCACCCAGTACCACTGGTGCTCTGTCGAGGACATTGCTGCCGATCGGTCAGTCAAGATGCATCGAGTATTTCCATTTCTTGTGATGATTTTTATGGAAAGTGAAGGAGATGCATATACATTCTGAGGAGCCTCTTGGATGGTTCCAGATAGGGTTTTATATTGGGAGGTGAGGATGTTGTGCTGATGAGATTCCATATACTATAGTGGCATTATGTTGTTTTCTTCTTTGCATGTAGATTCAAGCCAGATTTTTGTGCTTGAATGATGTAAAGAACTGAATTGGCGTTTCTCTATCTAGTAGGAAGGAGTACGTGATACAGAAAAAGGCAAATGTAGCAGAACCTGTTAAATTATACTAGTATAAAATTAAGGAAAAATCTGACAGTAAATCAAAAAAA ]
[+] EMBL CF315661 [ GAAAAAGGCAAATGTAGCAGAACCTGTTAAATTATACTAGTATAAAATTAAGGAAAAATCTGACAGTNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCTTGTTTGCCCTTTCCTAACAAAGGGGAAATTCCGGGCCCTTAAAATAAATTCCCCCTTAAGGGGAGTGTTTTAAAAATAAAGGGCCCGGGTTTAAAAAACGTGGAAATGGAAAAACCCTGGGGTTACCCAAATTAAATCCCTTGGAAAAAAATCCCCTTTTCCCAAGGGGGGAAAAAAAAAAAAAGCCCCAACCAAATCCCCTTTCCAAAAATTGGCCCACCTTATCCTACGGGAGTTTAAGGGTTAACCCTTAAAA]
[+] EMBL CF314660 [ GAAAAAGGCAAATGTAGCAGAACCTGTTAAATTATACTAGTATAAAATTAAGGAAAAATCTGACAGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA ]
consensusID : consensus_13839#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1107 fasta sequence
[GACACTGACATGGACTGAGGAGTAGAAAAAGCGAGACCACTCGGCCCCCACAAAATCCTCCGCTTCTTCTCCGAGACCGAGATGGCACTCGACTCTGTTCCATCCTACCCCAGCGATCTTGGATCCAGCAGGGCCAGGACGCCGCAGCAGCAAAGGGTCAGCCCCAGGAAGGAGGAGCGGACATGGACGACCGACACCTACGCGCCGTACGACGACGGCCACCAGTGGAGGAAGTACGGCGAGAAGAAACTCTCCAATTCCAACTTCCCAAGGTTCTATTACAGATGCACCTACAAGAATGACATGAAGTGCCCTGCTACGAAGCAAGTCCAGCAGAAGGACACTAATGATCCACCATTGTTCTCAGTCACTTACTTCAACCACCACACCTGCAACAGCAGCCCAAAGATCGTAGGCAGCACTCCTGATTCTACTGTGCAGTCGAGGAAAGCCATTTCGATCTGCTTCAATTCACATGGCAAAACCGGTGAACTGCCCACATTCTTGTCACCATCAGCTTCATTGTTGTCGCCGAGCATGCAGCCGTACAGTTCCAACCAGCAACCTGACATGAACACCTACAGTCGCCAGTTTCATTGGGCAGACACATCGTCATCTACAAGCTATGCTCCGGTTAAGATGGAGGCGGACGATTATGCGGAAGCAAGTGCTTCGCCCAGTACAACCGGTGCTCTGTCGAGGACATTGCTGCCGATCGGTCAGTCAAGATGCATCGAGTATTTCCATTTCTTGTGATGATTTTGATGGAAAGTGAAGGAGATGCATATACATTCTGAGGAGCCTCTTGGATGGTGCCAGATAGGGTTTTATATTGGGAGGTGGGGATGTTGTGCTCATGAGATTCCATATACTAGTGGCATTATGTTGTTTTCTTCTTTGCATGTAGATTCAAGCCAGATTTTTTTGCTTGAATGATGTAAAGAACTGAATTGGCATTTCTCTATCTAGTAGGAAGGAG-TACGTGATACAGAAAAAGGCTAAT-TAGCAGAATCTGTTAAATAATACGGGGTACTAGTATAAAATTAAGGAAAAAAGTGTCAGTAAAAAAAAGAAAAAAAAAAAAACCCTATCATGCCGTTACGTAGC]
[+] EMBL CF321308 [GACACTGACATGGACTGAGGAGTAGAAAAAGCGAGACCACTCGGCCCCCACAAAATCCTCCGCTTCTTCTCCGAGACCGAGATGGCACTCGACTCTGTTCCATCCTACCCCAGCGATCTTGGATCCAGCAGGGCCAGGACGCCGCAGCAGCAAAGGGTCAGCCCCAGGAAGGAGGAGCGGACATGGACGACCGACACCTACGCGCCGTACGACGACGGCCACCAGTGGAGGAAGTACGGCGAGAAGAAACTCTCCAATTCCAACTTCCCAAGGTTCTATTACAGATGCACCTACAAGAATGACATGAAGTGCCCTGCTACGAAGCAAGTCCAGCAGAAGGACACTAATGATCCACCATTGTTCTCAGTCACTTACTTCAACCACCACACCTGCAACAGCAGCCCAAAGATCGTAGGCAGCACTCCTGATTCTACTGTGCAGTCGAGGAAAGCCATTTCGATCTGCTTCAATTCACATGGCAAAACCGGTGAACTGCCCACATTCTTGTCACCATCAGCTTCATTGTTGTCGCCGAGCATGCAGCCGTACAGTTCCAACCAGCAACCTGACATGAACACCTACAGTCGCCAGTTTCATTGGGCAGACACATCGTCATCTACAAGCTATGCTCCGGTTAAGATGGAGGCGGACGATTATGCGGAAGCAAGTGCTTCGCCCAGTACAACCGGTGCTCTGTCGAGGACATTGCTGCCGATCGGTCAGTCAAGATGCAT ]
[-] EMBL CF317371 [ AAAGCCATTTCGATCTGCTTCAATTCACATGGCAAAACCGGTGAACTGCCCACATTCTTGTCACCATCAGCTTCATTGTTGTCGCCGAGCATGCAGCCGTACAGTTCCAACCAGCAACCTGACATGAACACCTACAGTCGCCAGTTTCATTGGGCAGACACATCGTCATCTACAAGCTATGCTCCGGTTAAGATGGAGGCGGACGATTATGCGGAAGCAAGTGCTTCGCCCAGTACAACCGGTGCTCTGTCGAGGACATTGCTGCCGATCGGTCAGTCAAGATGCATCGAGTATTTCCATTTCTTGTGATGATTTTGATGGAAAGTGAAGGAGATGCATATACATTCTGAGGAGCCTCTTGGATGGTGCCAGATAGGGTTTTATATTGGGAGGTGGGGATGTTGTGCTCATGAGATTCCATATACTAGTGGCATTATGTTGTTTTCTTCTTTGCATGTAGATTCAAGCCAGATTTTTTTGCTTGAATGATGTAAAGAACTGCATTGGGTTTTCTCTATCTAGTAGGAAGGAG TACGTGATACAGAAAAAGGCTAATGTAGCAGAATCTGTTAAATAATACGGGGTACTAGTATAAAATTAAGGAAAAAA ]
[-] EMBL CF327624 [ AGCCATTTCGATCTGCTTCAATTCACATGGCAAAACCGGTGAACTGCCCACATTCTTGTCACCATCAGCTTCATTGTTGTCGCCGAGCATGCAGCCGTACAGTTCCAACCAGCAACCTGACATGAACACCTACAGTCGCCAGTTTCATTGGGCAGACACATCGTCATCTACAAGCTATGCTCCGGTTAAGATGGAGGCGGACGATTATGCGGAAGCAAGTGCTTCGCCCAGTACAACCGGTGCTCTGTCGAGGACATTGCTGCCGATCGGTCAGTCAAGATGCATCGAGTATTTCCATTTCTTGTGATGATTTTGATGGAAAGTGAAGGAGATGCATATACATTCTGAGGAGCCTCTTGGATGGTGCCAGATAGGGTTTTATATTGGGAGGTGGGGATGTTGTGCTCATGAGATTCCATATACTAGTGGCATTATGTTGTTTTCTTCTTTGCGCGTAGATTCAAGCCAGATTTTTTTGCTTGAATGATGTAAAGAACTGAATTGGCATTTCTCTATCTAGTAGGAAGGAG TACGTGATACAGAAAAAGGCTAATGTAGCAGAATCTGTTAAATAAaaa ]
[-] EMBL CF321309 [ GCTTCATTGTTGTCGCCGAGCATGCAGCCGTACAGTTCCAACCAGCAACTTGACATGAACACCTACAGTCGCCAGTTTCATTGGGCAGACACATCGTCATCTACAAGCTATGCTCCGGTTAAGATGGAGGCGGACGATTATGCGGAAGCAAGTGCTTCGCCCAGTACAACCGGTGCTCTGTCGAGGACATTGCTGCCGATCGGTCAGTCAAAATGCATCGAGTATTTCCATTTCTTGTGATGATTTTGATGGAAAGTGAAGAAGATGCATATCCATTCTGAGGAGCCTCTTGGATGGTGCCAGATAGGGTTTTATATTGGGAGGTGGGGATGTTGTGCTCATGAGATTCCATATACTAGTGGCATTATGTTGTTTTCTTCTTTGCATGTAGATTCAAGCCAGATTTTTTTGCTTGAATGATGTAAAGAACTCAATTGGCATTTGTCTATTTAGTAGGAAGGAGCTACGTGATACAGAAAAAGGCTAAT TAGCAGAATCTGTTAAATAATACGGGGTAGTAGTATAAAATTAAGGAGGAATGTGTCAGTAAAAAAAAGAAAAAAAAAAAAACCCTATCATGCCGTTACGTAGC]
consensusID : consensus_13839#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 598 fasta sequence
[CGCCTTCCTTTCTTCCTCTTCCTCTCCCTCTTCCCTACCAAGCGAGACCACTCGGCCCCCACAAAATCCTCCGCTTCTTCTCCGAGACCGAGATGGCACTCGACTCTGTTCCATCCTACCCCAGCGATCTTGGATCCAGCAGGGCCAGGACGCCGCAGCAGCAAAGGGTCAGCCCCAGGAAGGAGGAGCGGACATGGACGACCGACACCTACGCGCCGTACGACGACGGCCACCAGTGGAGGAAGTACGGCGAGAAGAAACTCTCCAATTCCAACTTCCCAAGGTTCTATTACAGATGCACCTACAAGAATGACATGAAGTGCCCTGCTACGAAGCAAGTCCAGCAGAAGGACACTAATGATCCACCATTGTTCTCAGTCACTTACTTCAACCACCACACCTGCAACAGCAGCCCAAAGATCGTAGGCAGCACTCCTGATTCTACTGTGCAGTCGAGGAAAGCCATTTCGATCTGCTTCAATTCACATGGCAAAACCGGTGAACTGCCCACATTCTTGTCACCATCAGCTTCATTGTTGTCGCCGAGCATGCAGCCGTACAGTTCCAACCCAGC-ACCTGACATGAACACCTACAGTCG]
[+] EMBL CF336835 [CGCCTTCCTTTCTTCCTCTTCCTCTCCCTCTTCCCTACCAAGCGAGACCACTCGGCCCCCACAAAATCCTCCGCTTCTTCTCCGAGACCGAGATGGCACTCGACTCTGTTCCATCCTACCCCAGCGATCTTGGATCCAGCAGGGCCAGGACGCCGCAGCAGCAAAGGGTCAGCCCCAGGAAGGAGGAGCGGACATGGACGACCGACACCTACGCGCCGTACGACGACGGCCACCAGTGGAGGAAGTACGGCGAGAAGAAACTCTCCAATTCCAACTTCCCAAGGTTCTATTACAGATGCACCTACAAGAATGACATGAAGTGCCCTGCTACGAAGCAAGTCCAGCAGAAGGACACTAATGATCCACCATTGTTCTCAGTCACTTACTTCAACCACCACACCTGCAACAGCAGCCCAAAGATCGTAGGCAGCACTCCTGATTCTACTGTGCAGTCGAGGAAAGCCATTTCGATCTGCTTCAATTCACATGGCAAAACCGGTGAACTGCCCACATTCTTGTCACCATCAGCTTCATTGTTGTCGCCGAGCATGCAGCCGTACAGTTCCAACCCAGC ACCTGACATGAACACCTACAGTCG]
[+] EMBL CF327625 [ GCCTTCCTTTCTTCCTCTTCCTCTCCCTCTTCCCTACCAAGCGAGACCACTCGGCCCCCACAAAATCCTCCGCTTCTTCTCCGAGACCGAGATGGCACTCGACTCTGTTCCATCCTACCCCAGCGATCTTGGATCCAGCAGGGCCAGGACGCCGCAGCAGCAAAGGGTCAGCCCCAGGAAGGAGGAGCGGACATGGACGACCGACACCTACGCGCCGTACGACGACGGCCACCAGTGGAGGAAGTACGGCGAGAAGAAACTCTCCAATTCCAACTTCCCAAGGTTCTATTACAGATGCACCTACAAGAATGACATGAAGTGCCCTGCTACGAAGCAAGTCCAGCAGAAGGACACTAATGATCCACCATTGTTCTCAGTCACTTACTTCAACCACCACACCTGCAACAGCAGCCCAAAGATCGTAGGCAGCACTCCTGATTCTACTGTGCAGTCGAGGAAAGCCATTTCGATCTGCTTCAATTCACATGGCAAAACCGGTGAACTGCCCACATTCTTGTCACCATCAGCTTCATTGTTGTCGCCGAGCATGCAGCCGTACAGTTCCAA CCAGCAACCTGACATGAACACCTACAG ]
consensusID : consensus_13839#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 472 fasta sequence
[AGCAACCTGACATGAACACCTACAGTCGCCAGTTTCATTGGGCAGACACATTGTCATTTACAAGTTATGCTCCGGTTAAAATGGAGGCGGACGATTATGCGGAAGCAAGTGTTTTGCCCAGTACAACCGGTGTTTTGTTGAGGACATTGCTGCCGATCGGTCAGTCAAAATGCATCGAGTATTTCCATTTTTTGTGATGATTTTGATGGAAAGTGAAGGAGATGCATATACATTTTGAGGAGCCTTTTGGATGGGGCCAAATAGGGTTTTATATTGGGAGGTGGGGATGTTGGGCTCATGAGATTCCAAAAACTAGGGGCATTAAGTTGTTTTTTTTTTTGCAGGTAGATTCAAGCCAGATTTTTTTGCTTGAATGATGTAAAAAACTGAATTGGCATTTTTTTATTTAGTAGGAAGGAGTACGGGATCCAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[-] EMBL CF319509 [AGCAACCTGACATGAACACCTACAGTCGCCAGTTTCATTGGGCAGACACATTGTCATTTACAAGTTATGCTCCGGTTAAAATGGAGGCGGACGATTATGCGGAAGCAAGTGTTTTGCCCAGTACAACCGGTGTTTTGTTGAGGACATTGCTGCCGATCGGTCAGTCAAAATGCATCGAGTATTTCCATTTTTTGTGATGATTTTGATGGAAAGTGAAGGAGATGCATATACATTTTGAGGAGCCTTTTGGATGGGGCCAAATAGGGTTTTATATTGGGAGGTGGGGATGTTGGGCTCATGAGATTCCAAAAACTAGGGGCATTAAGTTGTTTTTTTTTTTGCAGGTAGATTCAAGCCAGATTTTTTTGCTTGAATGATGTAAAAAACTGAATTGGCATTTTTTTATTTAGTAGGAAGGAGTACGGGATCCAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_13839#1 GACACTGACATGGACTGAGGAGTAGAAAAAGCGAGACCACTCGGCCCCCACAAAATCCTC 60
consensus_13839#3 ------------------------------------------------------------
consensus_13839#0 ------------------------------------------------------------
consensus_13839#2 ------------------------------------------------------------
consensus_13839#1 CGCTTCTTCTCCGAGACCGAGATGGCACTCGACTCTGTTCCATCCTACCCCAGCGATCTT 120
consensus_13839#3 ------------------------------------------------------------
consensus_13839#0 ------------------------------------------------------------
consensus_13839#2 ------------------------------------------------------------
consensus_13839#1 GGATCCAGCAGGGCCAGGACGCCGCAGCAGCAAAGGGTCAGCCCCAGGAAGGAGGAGCGG 180
consensus_13839#3 ------------------------------------------------------------
consensus_13839#0 ------------------------------------------------------------
consensus_13839#2 ------------------------------------------------------------
consensus_13839#1 ACATGGACGACCGACACCTACGCGCCGTACGACGACGGCCACCAGTGGAGGAAGTACGGC 240
consensus_13839#3 ------------------------------------------------------------
consensus_13839#0 ------------------------------------------------------------
consensus_13839#2 ------------------------------------------------------------
consensus_13839#1 GAGAAGAAACTCTCCAATTCCAACTTCCCAAGGTTCTATTACAGATGCACCTACAAGAAT 300
consensus_13839#3 ------------------------------------------------------------
consensus_13839#0 ------------------------------------------------------------
consensus_13839#2 ------------------------------------------------------------
consensus_13839#1 GACATGAAGTGCCCTGCTACGAAGCAAGTCCAGCAGAAGGACACTAATGATCCACCATTG 360
consensus_13839#3 ------------------------------------------------------------
consensus_13839#0 ------------------------------------------------------------
consensus_13839#2 ------------------------------------------------------------
consensus_13839#1 TTCTCAGTCACTTACTTCAACCACCACACCTGCAACAGCAGCCCAAAGATCGTAGGCAGC 420
consensus_13839#3 ------------------------------------------------------------
consensus_13839#0 ------------------------------------------------------------
consensus_13839#2 ------------------------------------------------------------
consensus_13839#1 ACTCCTGATTCTACTGTGCAGTCGAGGAAAGCCATTTCGATCTGCTTCAATTCACATGGC 480
consensus_13839#3 ------------------------------------------------------------
consensus_13839#0 ----------------------------ACTGACTGAGGAGTGAAAAATTCCACGCCTTC 32
consensus_13839#2 ---------------------------------------------CGCCTTCCTTTCTTC 15
consensus_13839#1 AAAACCGGTGAACTGCCCACATTCTTGTCACCATCAGCTTCATTGTTGTCGCCGAGCATG 540
consensus_13839#3 ------------------------------------------------------------
consensus_13839#0 TTCTTCCTCTCCCTCTTCCCTACCAAGCGAGACCACTCGGCCCCCACAAAATC-TCCGCT 91
consensus_13839#2 CTCTTCCTCTCCCTCTTCCCTACCAAGCGAGACCACTCGGCCCCCACAAAATCCTCCGCT 75
consensus_13839#1 CAGCCGTACAGTTCCAACCAGCAACCTGACATGAACA--CCTACAGTCGCCAGTTTC-AT 597
consensus_13839#3 -------------------AGCAACCTGACATGAACA--CCTACAGTCGCCAGTTTC-AT 38
consensus_13839#0 TCTTCTCCGAGACCGAGATGGCACTCGACTCTGTTCCATCCTACCCCAGCGATCTTGGAT 151
consensus_13839#2 TCTTCTCCGAGACCGAGATGGCACTCGACTCTGTTCCATCCTACCCCAGCGATCTTGGAT 135
*** * ** * ***** ** * ** **
consensus_13839#1 TGGGCAGACACATCGTCATCTACAAGCTATGCTCCGGTTAAGATGGAGGCGGACGATTAT 657
consensus_13839#3 TGGGCAGACACATTGTCATTTACAAGTTATGCTCCGGTTAAAATGGAGGCGGACGATTAT 98
consensus_13839#0 CCAGCAGGGCCAGGACGCCGCAGCAGCAAAGGGTCAGCCCCAGGAAGGAGGAGCGGACAT 211
consensus_13839#2 CCAGCAGGGCCAGGACGCCGCAGCAGCAAAGGGTCAGCCCCAGGAAGGAGGAGCGGACAT 195
**** ** * ** * * * * * * ** **
consensus_13839#1 GCGGAAGCAAGTGCTTCGCCCAGTACAAC--CGGTGCTCTGTCGAGGACATTGCTGCCGA 715
consensus_13839#3 GCGGAAGCAAGTGTTTTGCCCAGTACAAC--CGGTGTTTTGTTGAGGACATTGCTGCCGA 156
consensus_13839#0 GGACGACCGACACCTACGCGCCGTACGACGACGGCCACCAGTGGAGGA-AGTACGGCGAG 270
consensus_13839#2 GGACGACCGACACCTACGCGCCGTACGACGACGGCCACCAGTGGAGGA-AGTACGGCGAG 254
* * * * * ** * **** ** *** ** ***** * * * **
consensus_13839#1 TCGGTCAGTCAAGATGCATCGAGTATTTCCATTTCTTGTGATGATTTTG---ATGGAAAG 772
consensus_13839#3 TCGGTCAGTCAAAATGCATCGAGTATTTCCATTTTTTGTGATGATTTTG---ATGGAAAG 213
consensus_13839#0 AAGAAACTCTCCAAT---TCCAACTTCCCAAGGTTCTATTACAGATGCACCTACAAGAAT 327
consensus_13839#2 AAGAAACTCTCCAAT---TCCAACTTCCCAAGGTTCTATTACAGATGCACCTACAAGAAT 311
* ** ** * * * * * * * * * * **
consensus_13839#1 TGAAGGAGATGCATATACATTCTGAGGAGCCTCTTGGATGGTGCCAGATAGGGTTTTAT- 831
consensus_13839#3 TGAAGGAGATGCATATACATTTTGAGGAGCCTTTTGGATGGGGCCAAATAGGGTTTTAT- 272
consensus_13839#0 GACATGAAGTGCCC-TGCTACGAAGCAAGTCCAGCAGAAGGACACTAATGATCCACCATT 386
consensus_13839#2 GACATGAAGTGCCC-TGCTACGAAGCAAGTCCAGCAGAAGGACACTAATGATCCACCATT 370
* ** *** * * ** * ** ** * ** **
consensus_13839#1 ATTGGGAGGTGGGGATGTTGTGCTC----------ATGAGATTCCATATACTAGTGGCAT 881
consensus_13839#3 ATTGGGAGGTGGGGATGTTGGGCTC----------ATGAGATTCCAAAAACTAGGGGCAT 322
consensus_13839#0 GTTCTCAGTCACTTACTTCAACCACCACACCTGCAACAGCAGCTCAAAGATCGTAGGCAG 446
consensus_13839#2 GTTCTCAGTCACTTACTTCAACCACCACACCTGCAACAGCAGCCCAAAGATCGTAGGCAG 430
** ** * * * * * * ** * * ****
consensus_13839#1 TATGTTGTTTTCTTCTTTGCATGTAGATTCAAGCCAGATTTTTTTGCTTGAATG---ATG 938
consensus_13839#3 TAAGTTGTTTTTTTTTTTGCAGGTAGATTCAAGCCAGATTTTTTTGCTTGAATG---ATG 379
consensus_13839#0 CACTCCTGATTCTACTGTGCA-GTCGAGGAAAGCCATTTCGATCTGCTTCAATTCACATG 505
consensus_13839#2 CACTCCTGATTCTACTGTGCA-GTCGAGGAAAGCCATTTCGATCTGCTTCAATTCACATG 489
* ** * * **** ** ** ****** * * ***** *** ***
consensus_13839#1 TAAAGAAC--TGAATTGGC-ATTTCTCTATC-TAGTAGGAAGGAGTACGTGATACAGAAA 994
consensus_13839#3 TAAAAAAC--TGAATTGGC-ATTTTTTTATT-TAGTAGGAAGGAGTACGGGATCCAGAAA 435
consensus_13839#0 GCCAAACCGGTGAACAGCCCACATTCTTGTCATCATCAGCTTCCTTGTTGTCACCGAGCA 565
consensus_13839#2 GCAAAACCGGTGAACTGCCCACATTCTTGTCACCATCAGCTTCATTGTTGTCGCCGAGCA 549
* * * **** * * * * * * * * * * *
consensus_13839#1 AAGGCTAATTAGCAGAATCTGTTAAATAATACGGGGTACTAGTATAAAATTAAGGAAAAA 1054
consensus_13839#3 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA----------------------- 472
consensus_13839#0 TGCAGTCGTACAGTTCCAACCAGCAACCTGACATGAACACCTACAGTCGCCAGTTTCAGT 625
consensus_13839#2 TGCAGCCGTACAGTTCCAACCCAGCACCTGACATGAACACCTACAGTCG----------- 598
* *
consensus_13839#1 AGTGTCAGTAAAAAAAAGAAAAAAAAAAAAACCCTATCATGCCGTTACGTAGC------- 1107
consensus_13839#3 ------------------------------------------------------------
consensus_13839#0 GGGCAGACACATCGTCATCTACAAGCAATGCTCCGGTTAAGATGGAGGCGGACGATTATG 685
consensus_13839#2 ------------------------------------------------------------
consensus_13839#1 ------------------------------------------------------------
consensus_13839#3 ------------------------------------------------------------
consensus_13839#0 CAGAAGCAAGTGCTTCACCCAGTACCACTGGTGCTCTGTCGAGGACATTGCTGCCGATCG 745
consensus_13839#2 ------------------------------------------------------------
consensus_13839#1 ------------------------------------------------------------
consensus_13839#3 ------------------------------------------------------------
consensus_13839#0 GTCAGTCAAGATGCATCGAGTATTTCCATTTCTTGTGATGATTTTTATGGAAAGTGAAGG 805
consensus_13839#2 ------------------------------------------------------------
consensus_13839#1 ------------------------------------------------------------
consensus_13839#3 ------------------------------------------------------------
consensus_13839#0 AGATGCATATACATTCTGAGGAGCCTCTTGGATGGTTCCAGATAGGGTTTTATATTGGGA 865
consensus_13839#2 ------------------------------------------------------------
consensus_13839#1 ------------------------------------------------------------
consensus_13839#3 ------------------------------------------------------------
consensus_13839#0 GGTGAGGATGTTGTGCTGATGAGATTCCATATACTATAGTGGCATTATGTTGTTTTCTTC 925
consensus_13839#2 ------------------------------------------------------------
consensus_13839#1 ------------------------------------------------------------
consensus_13839#3 ------------------------------------------------------------
consensus_13839#0 TTTGCATGTAGATTCAAGCCAGATTTTTGTGCTTGAATGATGTAAAGAACTGAATTGGCG 985
consensus_13839#2 ------------------------------------------------------------
consensus_13839#1 ------------------------------------------------------------
consensus_13839#3 ------------------------------------------------------------
consensus_13839#0 TTTCTCTATCTAGTAGGAAGGAGTACGTGATACAGAAAAAGGCAAATGTAGCAGAACCTG 1045
consensus_13839#2 ------------------------------------------------------------
consensus_13839#1 ------------------------------------------------------------
consensus_13839#3 ------------------------------------------------------------
consensus_13839#0 TTAAATTATACTAGTATAAAATTAAGGAAAAATCTGACAGTAAAAAAAAAAAAAAAAAAA 1105
consensus_13839#2 ------------------------------------------------------------
consensus_13839#1 ------------------------------------------------------------
consensus_13839#3 ------------------------------------------------------------
consensus_13839#0 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1165
consensus_13839#2 ------------------------------------------------------------
consensus_13839#1 ------------------------------------------------------------
consensus_13839#3 ------------------------------------------------------------
consensus_13839#0 AAAAAAAAAAAAAACCCTTGTTTGCCCTTTCCTAACAAAGGGGAAATTCCGGGCCCTTAA 1225
consensus_13839#2 ------------------------------------------------------------
consensus_13839#1 ------------------------------------------------------------
consensus_13839#3 ------------------------------------------------------------
consensus_13839#0 AATAAATTCCCCCTTAAGGGGAGTGTTTTAAAAATAAAGGGCCCGGGTTTAAAAAACGTG 1285
consensus_13839#2 ------------------------------------------------------------
consensus_13839#1 ------------------------------------------------------------
consensus_13839#3 ------------------------------------------------------------
consensus_13839#0 GAAATGGAAAAACCCTGGGGTTACCCAAATTAAATCCCTTGGAAAAAAATCCCCTTTTCC 1345
consensus_13839#2 ------------------------------------------------------------
consensus_13839#1 ------------------------------------------------------------
consensus_13839#3 ------------------------------------------------------------
consensus_13839#0 CAAGGGGGGAAAAAAAAAAAAAGCCCCAACCAAATCCCCTTTCCAAAAATTGGCCCACCT 1405
consensus_13839#2 ------------------------------------------------------------
consensus_13839#1 ----------------------------------
consensus_13839#3 ----------------------------------
consensus_13839#0 TATCCTACGGGAGTTTAAGGGTTAACCCTTAAAA 1439
consensus_13839#2 ----------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||