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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14177#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 13 consensus length = 1821 fasta sequence
[CCCCCCAAATCCCCCTCCTCCTCCGCCACCGCCATGGCTCGCCTCCTCCTCCCCCTCCCCATCGCCGCCGCCGCCGCCTCCCGCCTCCGCCTCCCCGTCCTCTCCTCCTCCGTGGCGCGGCGTGAGGCGCTGCTCTTCGGGGGGAGGGTGGCGGCGGCGAGGGCGCCGGTGAGGCTGGCGAGGAGAGGGGTGAGCGCCGGGGCGGAGGCGGGCGGGTCGTCGTCGGCCGCCGCGGCAGCGCAGGTGATCGGGCAGGACGAGGCGGTGGAGTGGGTCAAGAAGGACCGGAGGCGCATGCTCCATGTCGTCTACCGCGTCGGCGACCTCGACAAGACGATCAAGTTTTACACCGAGTGCTTGGGGATGAAGCTGTTGCGCAAGCGCGACATTCCGGAGGAGAGGTATACCAATGCTTTTCTCGGGTACGGGCCTGAGGACTCGCATTTTGTTGTGGAGCTCACTTACAATTATGGTGTGGAAAGTTATGATATCGGGACTGCTTTCGGTCACTTCGGGATTGCTGTCGAGGACGTTGCAAAAACAGTAGATCTCATTAAAGCCAAGGGAGGAACGGTAACAAGAGAACCAGGACCTGTAAAAGGTGGAAAGTCTGTAATTGCTTTTATTGAAGATCCTGATGGTTACAAATTTGAGCTTATAGAAAGAGGTCCTACACCTGAGCCTTTATGCCAGGTAATGCTTCGAGTGGGAGATCTTGATCATGCTATCAATTTCTATGAGAAGGCATTTGGCATGGAACTTCTCCGGAAACGAGACAATCCCCAATACAAGTATACTATTGCAATGATGGGATATGGTCCTGAAGACAAAAATGCTGTACTGGAGTTGACCTACAACTATGGTGTCAAGGAATATGATAAAGGAAATGCTTATGCACAGATTGCTATTAGCACAGATGATGTCTACAAGACTGCGGAAGTCATTAGACAAAATGGTGGACAAATAACTCGTGAACCTGGCCCATTACCTGGAATTAATACGAAGATAACTGCTTGCACAGATCCAGATGGCTGGAAAACAGTATTTGTTGATAATGTAGATTTTCTCAAGGAGTTGGAAGAATGAGTTTTTGCCAATGATCTCATCTTGGTACAGGATTCAGAGGTTTTTCCCCTTGATTTGACATCTTGCGCCCTTGAAATCTTGTAAAAGCCACACCACCTCGAACTGAGGTTTGTAGATAGGCCATGCAAATCTACCATTCCACAGTTGGTAGTTTAATAGAGCATTAGATTACAACATTCCAAGCGATGTAGATGCGCAATCCATTTTGTTAGCGAAGTCAAATCATATGTACAAATTTTG-TTTTCCGGGTCAGAACTATTGTTCTTAATCAATCCATTTTACATTCGAAAGTTAGCATTCCTGCTGTAGGACTTCTTGTCATTTGTATTCTATGTCATGGAATATGAATGAATGGTGGTAAGTATGGAATCAGCGAGTGAGGAGCACAAACGCTGAGAACTGAAAAGTCTTTTGTGCTTTATCCATGGGCGCCCTGGAAGAAAGGAGAGAAAGGTTACATGTGATCTTTTACGTTGATATGGTGCCCATTTGACATGGAGCGAGATGGCGACAGTGTTCATCACTGTTAACATATGAAGGCATATTATATAGCAAAAGATTCTATGAATACCAGCGTCAGTGTAAGTTGAGTTTGACCTAGTTTTATTGACAATAATATTGGCAAAGTTGTACTTTCATCCAGATTTGTATAATTGTATGCATGGTTTTGGGACATTTTGTTTAAAAAAAAAAAAAAAAAACAAAGTCATGCCGTTACGTAGCGTATCGTGACAG]
[+] EMBL CB665649 [CCCCCCAAATCCCCCTCCTCCTCCGCCACCGCCATGGCTCGCCTCCTCCTCCCCCTCCCCATCGCCGCCGCCGCCGCCTCCCGCCTCCGCCTCCCCGTCCTCTCCTCCTCCGTGGCGCGGCGTGAGGCGCTGCTCTTCGGGGGGAGGGTGGCGGCGGCGAGGGCGCCGGTGAGGCTGGCGAGGAGAGGGGTGAGCGCCGGGGCGGAGGCGGGCGGGTCGTCGTCGGCCGCCGCGGCAGCGCAGGTGATCGGGCAGGACGAGGCGGTGGAGTGGGTCAAGAAGGACCGGAGGCGCATGCTCCATGTCGTCTACCGCGTCGGCGACCTCGACAAGACGATCAAGTTTTACACCGAGTGCTTGGGGATGAAGCTGTTGCGCAAGCGCGACATTCCGGAGGAGAGGTATACCAATGCTTTTCTCGGGTACGGGCCTGAGGACTCGCATTTTGTTGTGGAGCTCACTTACAATTATGGTGTGGAAAGTTATGATATCGGGACTGCTTTCGGTCACTTCGGGATTGCTGTCGAGGACGTTGCAAAAACAGTAGATCTCATTAAAGCCAAGGGAGGAACGGTAACAAGAGAACCAGGACCTGTAAAAGGTGGAAAGTCTGAAATTGCTTTTATTGAAGATCCTGATGGTTACAAATTTGAGCTTATAGAAAGAGGTCCTACACCTGAGCCTTTATGCCAGGTAATGCTTCGAGTGGGAGATCTTGATCATGCTATCAATTTCTATGAGAAGGCATTTGGCATGGAACTTCTCCG ]
[+] EMBL CB656607 [ GCGCCGCTTAGGCTGGCGAGGAGAGGGGTGAGCGCCGGGGCGGAGGCGGGCGGGTCGTCGTCGGCCGCCGCGGCAGCGCAGGTGATCGGGCAGGACGAGGCGGTGGAGTGGGTCAAGAAGGACCGGAGGCGCATGCTCCATGTCGTCTACCGCGTCGGCGACCTCGACAAGACGATCAAGTTTTACACCGAGTGCTTGGGGATGAAGCTGTTGCGCAAGCGCGACATTCCGGAGGAGAGGTATACCAATGCTTTTCTCGGGTACGGGCCTGAGGACTCGCATTTTGTTGTGGAGCTCACTTACAATTATGGTGTGGAAAGTTATGATATCGGGACTGCTTTCGGTCACTTCGGGATTGCTGTCGAGGACGTTGCAAAAACAGTAGATCTCATTAAAGCCAAGGGAGGAACGGTAACAAGAGAACCAGGACCTGTAAAAGGTGGAAAGTCTGTAATTGCTTTTATTGAAGATCCTGATGGTTACAAATTTGAGCTTATAGAAAGAGGTCCTACACCTGAGCCTTTATGCCAGGTAATGCTTCGAGTGGGAGATCTTGATCATGCTATCAATTTCTATGAGAAGGCATTTGGCATGGAACTTCTCCGGAAACGAGACAATCCCCAATACAAGTATACTATTGCAATGATGGGATATGGTCCTGAAGACAAAAATGCTGTACTGGAGTTGACCTACAACTATGGTGTNCAGGAATATGATAAAGGAAATGCTTATGCACAGATTGCTATTAGCACAGATGATGTCTACAAGACTGCGGAAGTCATTAGACAA ]
[+] EMBL CB660678 [ ctctctctcCGCCGGTGAGGCTGGCGAGCAGTGGGGTGAGCGCCGGGGCGGAGGCGGGCGGGTCGTCCCCTGCCGCCGCGGCAGCGCAGGTGATCGGGCAGGACGAGGCGGTGGAGTGGGTCAAGAAGGACCGGAGGCGCATGCTCCATGTCGTCTACCGCGTCGGCGACCTCGACAAGACGATCAAGTTTTACACCGAGTGCTTGGGGATGAAGCTGTTGCGCAAGCGCGACATTCCGGAGGAGAGGTATACCAATGCTTTTCTCGGGTACGGGCCTGAGGACTCGCATTTTGTTGTGGAGCTCACTTACAATTATGGTGTGGAAAGTTATGATATCGGGACTGCTTTCGGTCACTTCGGGATTGCTGTCGAGGACGTTGCAAAAACAGTAGATCTCATTAAAGCCAAGGGAGGAACGGTAACAAGAGAACCAGGACCTGTAAAAGGTGGAAAGTCTGTAATTGCTTTTATTGAAGATCCTGATGGTTACAAATTTGAGCTTATAGAAAGAGGTCCTACACCTGAGCCTTTATGCCAGGTAATGCTTCGAGTGGGAGATCTTGATCATGCTATCAATTTCTATGAGAAGGCATTTGGCATGGAACTTCTCCGGAAACGAGACAATCCCCAATACAAGTATACTATTGCAATGATGGGATATGGTCCTGAAGACAAAAATGCTGTACTGGAGTTGACCTACAACTATGGTGTCAAGGAATATGATAAAGGAAATGCTTATGCACAGATTGCTATTAGCACAGATGATGTCTACAAGACTGCGGAAGTCATTAGACAAAATGGTGGACAAATAACTCGTGAACCT ]
[+] EMBL AK067996 [ TCGTCGGCCGCCGCGGCAGCGCAGGTGATCGGGCAGGACGAGGCGGTGGAGTGGGTCAAGAAGGACCGGAGGCGCATGCTCCATGTCGTCTACCGCGTCGGCGACCTCGACAAGACGATCAAGTTTTACACCGAGTGCTTGGGGATGAAGCTGTTGCGCAAGCGCGACATTCCGGAGGAGAGGTATACCAATGCTTTTCTCGGGTACGGGCCTGAGGACTCGCATTTTGTTGTGGAGCTCACTTACAATTATGGTGTGGAAAGTTATGATATCGGGACTGCTTTCGGTCACTTCGGGATTGCTGTCGAGGACGTTGCAAAAACAGTAGATCTCATTAAAGCCAAGGGAGGAACGGTAACAAGAGAACCAGGACCTGTAAAAGGTGGAAAGTCTGTAATTGCTTTTATTGAAGATCCTGATGGTTACAAATTTGAGCTTATAGAAAGAGGTCCTACACCTGAGCCTTTATGCCAGGTAATGCTTCGAGTGGGAGATCTTGATCATGCTATCAATTTCTATGAGAAGGCATTTGGCATGGAACTTCTCCGGAAACGAGACAATCCCCAATACAAGTATACTATTGCAATGATGGGATATGGTCCTGAAGACAAAAATGCTGTACTGGAGTTGACCTACAACTATGGTGTCAAGGAATATGATAAAGGAAATGCTTATGCACAGATTGCTATTAGCACAGATGATGTCTACAAGACTGCGGAAGTCATTAGACAAAATGGTGGACAAATAACTCGTGAACCTGGCCCATTACCTGGAATTAATACGAAGATAACTGCTTGCACAGATCCAGATGGCTGGAAAACAGTATTTGTTGATAATGTAGATTTTCTCAAGGAGTTGGAAGAATGAGTTTTTGCCAATGATCTCATCTTGGTACAGGATTCAGAGGTTTTTCCCCTTGATTTGACATCTTGCGCCCTTGAAATCTTGTAAAAGCCACACCACCTCGAACTGAGGTTTGTAGATAGGCCATGCAAATCTACCATTCCACAGTTGGTAGTTTAATAGAGCATTAGATTACAACATTCCAAGCGATGTAGATGCGCAATCCATTTTGTTAGCGAAGTCAAATCATATGTACAAATTTTG TTTTCCCGGTCAGAACTATTGTTCTTAATCAATCCATTTTACATTCGAAAGTTAGCATTCCTGCTGTAGGACTTCTTGTCATTTGTATTCTATGTCATGGAATATGAATGAATGGTGGTAA ]
[+] EMBL BE530940 [ gcCCGCCGCGGCGGCGCAGGTGATCGGGCAGGACGAGGCGGTGGAGTGGGTCAAGAAGGACCGGAGGCGCATGCTCCATGTCGTCTACCGCGTCGGCGACCTCGACAAGACGATCAAGTTTTACACCGAGTGCTTGGGGATGAAGCTGTTGCGCAAGCGCGACATTCCGGAGGAGAGGTATACCAATGCTTTTCTCGGGTACNGGCCTGAGGACTCGCATTTTGTTGTGGAGCTCACTTACAATTATGGTGTGGAAAGTTATGATATCGGGACTGCTTTCGGTCACTTCNGGATTGCTGTCGAGGACGTTGCAAAAACANTAGATCTCATTAAAGCCAAGGGAGGAACGGT NCAAGAG ACCACGACCTGTTAAANGNGGAAAGTCTGTAATTGCTTTTATTGAAGATCCTGATGGTTAC ]
[-] EMBL CB660677 [ AAAAACAGTAGATCTCATTAAAGCCAAGGGAGGAACGGTAACAAGAGAACCAGGACCTGTAAAAGGTGGAAAGTCTGTAATTGCTTTTATTGAAGATCCTGATGGTTACAAATTTGAGCTTATAGAAAGAGGTCCTACACCTGAGCCTTTATGCCAGGTAATGCTTCGAGTGGGAGATCTTGATCATGCTATCAATTTCTATGAGAAGGCATTTGGCATGGAACTTCTCCGGAAACGAGACAATCCCCAATACAAGTATACTATTGCAATGATGGGATATGGTCCTGAAGACAAAAATGCTGTACTGGAGTTGACCTACAACTATGGTGTCAAGGAATATGATAAAGGAAATGCTTATGCACAGATTGCTATTAGCACAGATGATGTCTACAAGACTGCGGAAGTCATTAGACAAAATGGTGGACAAATAACTCGTGAACCTGGCCCATTACCTGGAATTAATACGAAGATAACTGCTTGCACAGATCCAGATGGCTGGAAAACAGTATTTGTTGATAATGTAGATTTTCTCAAGGAGTTGGAAGAATGAGTTTTTGCCAATGATCTCATCTTGGTACAGGATTCAGAGGTTTTTCCCCTTGATTTGACATCTTGCGCCCTTGAAATCTTGTAAAAGCCACACCACCTCGAACTGAGGTTTGTAGATAGGCCATGCAAATCTACCATTCCACAGTTGGTAGTTTAATAGAGCATTAGATTACAACATTCCAAGCGATGTAGATGCGCAATCCATTTTGTTAGCGAAGTCAAATCATATGTACAAATTTTG TTTTCCGGGTCAGAACTATTGTTCTTAATCAATCCATTTTACAT ]
[+] EMBL CA766313 [ AACAAGAGAACC GGACCTGTAAAAGGTGGAAAGTCTGTAATTGCTTTTATTGAAGATCCAGATGGTTACAAATTTGAGCTTATAGAAAGAGGTCCTACACCTGAGCCTTTATGCCAGGTAATGCTTCGAGTGGGAGATCTTGATCATGCTATCAATTTCTATGAGAAGGCATTTGGCATGGAACTTCTCCGGAAACGAGACAATCCCCAATACAAGTATACTATTGCAATGATGGGATATGGTCCTGAAGACAAAAATGCTGTACTGGAGTTGACCTACAACTATGGTGTCAAGGAATATGATAAAGGAAATGCTTATGCACAGATTGCTATTAGCACAGATGATGTCTACAAGACTGCGGAAGTCATTAGACAAAATGGTGGACAAATAACTCGTGAACCTGGCCCATTACCTGGAATTAATACGAAGATAACTGCTTGCACAGATCCAGATGGCTGGAAAACAGTATTTGTTGATAATGTAGATTTCCTCAAGGAGTTGGAAGAATGAGTTTTTGCCAATGATCTCATCTTGGTACATGATTCAGAGGTTTTTCCCCTTGATTTGACATCTTGCGCCCTTGAAATCTTGTAAAAGCCACACCACCTCGAACTGAGGTTTGTAGATAGGCCATGCAAATCTACCATTCCACAGTTGGTAGTTTAATAGAGCATTAGATTACAACATTCCAAGCGATGTAGATGCGCAATCCATTTTGTTAGCGAAGTCAAATCATATGTACAAATTTTGTTTTTCCGGGTCAGAACTATTGgt ]
[-] EMBL CB654005 [ CTTTATGCCAGGTAATGCTTCGAGTGGGAGATCTTGATCATGCTATCAATTTCTATGAGAAGGCATTTGGCATGGAACTTCTCCGGAAACGAGACAATCCCCAATACAAGTATACTATTGCAATGATGGGATATGGTCCTGAAGACAAAAATGCTGTACTGGAGTTGACCTACAACTATGGTGTCAAGGAATATGATAAAGGAAATGCTTATGCACAGATTGCTATTAGCACAGATGATGTCTACAAGACTGCGGAAGTCATTAGACAAAATGGTGGACAAATAACTCGTGAACCTGGCCCATTACCTGGAATTAATACGAAGATAACTGCTTGCACAGATCCAGATGGCTGGAAAACAGTATTTGTTGATAATGTAGATTTTCTCAAGGAGTTGGAAGAATGAGTTTTTGCCAATGATCTCATCTTGGTACAGGATTCAGAGGTTTTTCCCCTTGATTTGACATCTTGCGCCCTTGAAATCTTGTAAAAGCCACACCACCTCGAACTGAGGTTTGTAGATAGGCCATGCAAATCTACCATTCCACAGTTGGTAGTTTAATAGAGCATTAGATTACAACATTCCAAGGGATGTAGATGCGCAATCCATTTTGTTAGGGAAGTCAAATCATATGTACAAATTTTG TTTTCCGGGTCAGAAAGGTTGTTATTAATC ]
[+] EMBL AA751971 [ ttngcaagAGGAAATGCTTGTNCCCAGATTGATATTAGCNNAGATGATGTCTACAAGACTGCGGAAGTCATTAGACCAAATGGTGGACAAATAACTCGTGAACCTGGCCCATTACCTGGAATTAATACGAAGATAACTGCTTGCACAGATCCAGATGGCTGGAAAACAGTATTTGTTGATAATGTANATTTCCTCAAGGAGTTGGAAGAATGAGTTTTTGCCAATGATCTCATCTTGGTACATGATTCAGAGGTTTTTCCCCTTGATTTGACATCTTGCGCCCTTGAAATCTTGTNNNNTCCNCACCACCTCGAACTGAGGTTTGTAGATAGGCCATGCAAATCTACCATTCCACAGTTGGTAGTTTAATAGAGCATTAGATTACAACATTCCAAGCGATGTNGATGCGCAATCCATTTTGTTAGCGAAGTCAAATCATATGTNCAAATTTTG TTTTCCGGGTCAGAACTATTGTTCTTAAT ]
[-] EMBL CB665650 [ GAAGATAACTGCTTGCACAGATCCAGATGGCTGGAAAACAGTATTTGTTGATAATGTAGATTTTCTCAAGGAGTTGGAAGAATGAGTTTTTGCCAATGATCTCATCTTGGTACAGGATTCAGAGGTTTTTCCCCTTGATTTGACATCTTGCGCCCTTGAAATCTTGTAAAAGCCACACCACCTCGAACTGAGGTTTGTAGATAGGCCATGCAAATCTACCATTCCACAGTTGGTAGTTTAATAGAGCATTAGATTACAACATTCCAAGCGATGTAGATGCGCAATCCATTTTGTTAGCGAAGTCAAATCATATGTACAAATTTTG TTTTCCGGGTCAGAACTATTGTTCTTAATCAATCCATTTTACATTCGAAAGTTAGCATTCCTGCTGTAGGACTTCTTGTCATTTGTATTCTATGTCATGGAATATGAATGAATGGTGGTAAGTATGGAATCAGCGAGTGAGGAGCACAAACGCTGAGAACTGAAAAGTCTTTTGTGCTTTATCCATGGGCGCCCTGGAAGAAAGGAGAGAAAGGTTACATGTGATCTTTTACGTTGATATGGTGCCCATTTGACATGGAGCGAGATGGCGACAGTGTTCATCACTGTTAACATATGAAGGCATATTATATAGCAAAAGATTCTATGAATACCAGCGTCAGTGTAAGTTGAGTTTGACCTAGTTTTATTGACAATAATATTGGCAAAGTTGTACTTTCATCCAGATTTGTATAATTGTATGCATGGTTTTGGGACATTTTGTT ]
[-] EMBL CA762098 [ CCCCTTGATTTGACATCTTGCGCCCTTGAAATCTTGTAAAAGCCACACCACCTCGAACTGAGGTTTGTAGATAGGCCATGCAAATCTACCATTCCACAGTTGGTAGTTTAATAGAGCATTAGATTACAACATTCCAAGCGATGTAGATGCGCAATCCATTTTGTTAGCGAAGTCAAATCATATGTACAAATTTTG TTTTCCGGGTCAGAACTATTGTTCTTAATCAAaaaaaaaaa ]
[+] EMBL CF330282 [ CACAGTTGGTAGTTTAATAGAGCATTAGATTACAACATTCCAAGCGATGTAGATGCGCAATCCATTTTGTTAGCGAAGTCGAATCATATGTACAAATTTTG TTTTCCGGGTCAGAACTATTGTTCTTAATCAATCCATTGGACATTCGAAAGTTGGCATTCCTGCTGTAGGACTTCTTGTCATTGGTATGCTATGTCATGGAATATGAATGAATGGTGGTAAGTATGGAATCAGCGAGTGAGGAGCACAAACGCTGAGAACTGAAAAGTCTTTTGTGCTTTATCCATGGGCGCCCTGGAACAAAGGAGAGAAAGGTTACATGGGATCTTTTACGTTGAGAGGGGGCCCATTTGACATGGAGCGAGATGGCGACAGc ]
[-] EMBL CF330283 [ GTAGTTTAATAGAGCATTAGATTACAACATTCCAAGCGATGTAGATGCGCAATCCATTTTGTTAGCGAAGTCGAATCATATGTACAAATTTTG TTTTCCGGGTCAGAACTATTGTTCTTAATCAATCCATTTTACATTCGAAAGTTGGCATTCCTGCTGTAGGACTTCTTGTCATTTGTATTCTATGTCATGGAATATGAATGAATGGTGGTAAGTATGGAATCAGCGAGTGAGGAGCACAAACGCTGAGAACTGAAAAGTCTTTTGTGCTTTATCCATGGGCGCCCTGGAAGAAAGGAGAGAAAGGTTACATGTGATCTTTTACGTTGATATGGTGCCCATTTGACATGGAGCGAGATGGCGACAGTGTTCATCACTGTTAACATATGAAGGCATATTATATAGCAAAAGATTCTATGAATACCAGCGTCAGTGTAAGTTGAGTTTGACCTAGTTTTATTGACAATAATATTGGCAAAGTTGTACTTTCATCCAGATTTGTATAATTGTATGCATGGTTTTGGGACATTTTGTTTAAAAAAAAAAAAAAAAAACAAAGTCATGCCGTTACGTAGCGTATCGTGACAG]
consensusID : consensus_14177#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 812 fasta sequence
[GGGGGATCTTAGAATAATAATACTCCTAAGTACATTTGTCAGAAAAAAAGTATATGCATATGCATTATTAGTTTGTTGCATTACATATTTTGTGCCNTGCCTCTATTTTCATGAAGAACCCGCAGTTTCTTCCGTCTGATACATTAATTACCATAATTGCAGGTATTTGTTGATAATGTAGATTTCCTCAAGGAGTTGGAAGAATGAGTTTTTGCCAATGATCTCATCGTGGTACATGATTCAGAGGTTTTTCCCCTTGATTTGACATCTTGCGCCCTTGAAATCTTGTAAAAGCCACACCACCTCGAACTGAGGTTTGTAGATAGGCCATGCAAATCTACCATTCCACAGTTGGTAGTTTAATAGAGCATTAGATTACAACATTCCAAGCGATGTAGATGCGCAATCCATTTTGTTAGCGAAGTCAAATCATATGTACAAATTTTGTTTTCCGGGTCAGAACTATTGNTCTTAATCAATCCATTTTACATTCGAAAGTTAGCATTCCTGCTGTAGGACTTCTTGTCATTTGTATTCTATGTCATGGAATATGAATGAATGGTGCTAAGTATGGAATCAGCGAGTGAGGAGCACAAACGCTGAGAACTGAAAGTCTTTTGTGCTTTATCCATGGGCGCCCTGGAAGAAAGGAGAGAAAGGTTACACTTTTTGTCAATCAACAGTCAGAAATTTCTAGTTTTCACTATGGGTAAATCAGATTGATGCCACATGTGATCTTTTACGTTGATATGGTGCCCATTTGACATGGGAGCGAGATGGCGACAGNGGTCATCACTGGTNACATATGAAGG]
[+] EMBL CB096776 [GGGGGATCTTAGAATAATAATACTCCTAAGTACATTTGTCAGAAAAAAAGTATATGCATATGCATTATTAGTTTGTTGCATTACATATTTTGTGCCNTGCCTCTATTTTCATGAAGAACCCGCAGTTTCTTCCGTCTGATACATTAATTACCATAATTGCAGGTATTTGTTGATAATGTAGATTTCCTCAAGGAGTTGGAAGAATGAGTTTTTGCCAATGATCTCATCGTGGTACATGATTCAGAGGTTTTTCCCCTTGATTTGACATCTTGCGCCCTTGAAATCTTGTAAAAGCCACACCACCTCGAACTGAGGTTTGTAGATAGGCCATGCAAATCTACCATTCCACAGTTGGTAGTTTAATAGAGCATTAGATTACAACATTCCAAGCGATGTAGATGCGCAATCCATTTTGTTAGCGAAGTCAAATCATATGTACAAATTTTGTTTTCCGGGTCAGAACTATTGNTCTTAATCAATCCATTTTACATTCGAAAGTTAGCATTCCTGCTGTAGGACTTCTTGTCATTTGTATTCTATGTCATGGAATATGAATGAATGGTGCTAAGTATGGAATCAGCGAGTGAGGAGCACAAACGCTGAGAACTGAAAGTCTTTTGTGCTTTATCCATGGGCGCCCTGGAAGAAAGGAGAGAAAGGTTACACTTTTTGTCAATCAACAGTCAGAAATTTCTAGTTTTCACTATGGGTAAATCAGATTGATGCCACATGTGATCTTTTACGTTGATATGGTGCCCATTTGACATGGGAGCGAGATGGCGACAGNGGTCATCACTGGTNACATATGAAGG]
consensusID : consensus_14177#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 682 fasta sequence
[TCTGCTATCAATTTCTATGAGAAGGCATTTGGCATGGAACTTCTCCGGAAACGAGACAATCCCCAATACAAGGTTGGTACTTTTCGAAACCATTGCATGGATTTACCTCGTGACACTCATGGCTTCTGTTTGCCCTGATGCTTTCTAATGTTATGCTCTACTACAAAGTACTAGACAAACATTCAAAAGAGCTTCCATCAATGTACCTCATCACCTCCATTGCTATGACTTCTGTTTGTCCTCATGGCTTCTGTTTGCCCTGATGCTTTCTAATCTGATCCTTGCTTAAGTGAGATAAGGAAAAACATGCACTACTACCTCGAAATATGAGAACATGTTAAATGCACTTTTTGTTTGTAAACTATTTGCTTAGTTCCATATCTTATACAGTGGTATCCTGACTTACGGAGAACATGTTAAATGTAGCTATTATGGTTGTATCCTGATTTTTGCTACATTCATACACTGGGTTCAGACTTCAGACTTGGGTAGTAGGCATGGTATTGATAAAACCGAAGTGATAGCAAGTTCCGCATGTGCATTTACTGGTTGTTTCATTATACATGCCATTGGTTCTTATATTTCTTTCTAGAGATGGGAACTTCGTTGNTTTTAGGCATCATTTTTCTGGNGNTGACAAGCCTTTTTCTTTTCTTTTTGAAATCTTANTCTCAAGCATGTT]
[+] EMBL CB096556 [TCTGCTATCAATTTCTATGAGAAGGCATTTGGCATGGAACTTCTCCGGAAACGAGACAATCCCCAATACAAGGTTGGTACTTTTCGAAACCATTGCATGGATTTACCTCGTGACACTCATGGCTTCTGTTTGCCCTGATGCTTTCTAATGTTATGCTCTACTACAAAGTACTAGACAAACATTCAAAAGAGCTTCCATCAATGTACCTCATCACCTCCATTGCTATGACTTCTGTTTGTCCTCATGGCTTCTGTTTGCCCTGATGCTTTCTAATCTGATCCTTGCTTAAGTGAGATAAGGAAAAACATGCACTACTACCTCGAAATATGAGAACATGTTAAATGCACTTTTTGTTTGTAAACTATTTGCTTAGTTCCATATCTTATACAGTGGTATCCTGACTTACGGAGAACATGTTAAATGTAGCTATTATGGTTGTATCCTGATTTTTGCTACATTCATACACTGGGTTCAGACTTCAGACTTGGGTAGTAGGCATGGTATTGATAAAACCGAAGTGATAGCAAGTTCCGCATGTGCATTTACTGGTTGTTTCATTATACATGCCATTGGTTCTTATATTTCTTTCTAGAGATGGGAACTTCGTTGNTTTTAGGCATCATTTTTCTGGNGNTGACAAGCCTTTTTCTTTTCTTTTTGAAATCTTANTCTCAAGCATGTT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_14177#0 CCCCCCAAATCCCCCTCCTCCTCCGCCACCGCCATGGCTCGCCTCCTCCTCCCCCTCCCC 60
consensus_14177#1 ------------------------------------------------------------
consensus_14177#2 ------------------------------------------------------------
consensus_14177#0 ATCGCCGCCGCCGCCGCCTCCCGCCTCCGCCTCCCCGTCCTCTCCTCCTCCGTGGCGCGG 120
consensus_14177#1 ------------------------------------------------------------
consensus_14177#2 ------------------------------------------------------------
consensus_14177#0 CGTGAGGCGCTGCTCTTCGGGGGGAGGGTGGCGGCGGCGAGGGCGCCGGTGAGGCTGGCG 180
consensus_14177#1 ------------------------------------------------------------
consensus_14177#2 ------------------------------------------------------------
consensus_14177#0 AGGAGAGGGGTGAGCGCCGGGGCGGAGGCGGGCGGGTCGTCGTCGGCCGCCGCGGCAGCG 240
consensus_14177#1 ------------------------------------------------------------
consensus_14177#2 ------------------------------------------------------------
consensus_14177#0 CAGGTGATCGGGCAGGACGAGGCGGTGGAGTGGGTCAAGAAGGACCGGAGGCGCATGCTC 300
consensus_14177#1 ------------------------------------------------------------
consensus_14177#2 ------------------------------------------------------------
consensus_14177#0 CATGTCGTCTACCGCGTCGGCGACCTCGACAAGACGATCAAGTTTTACACCGAGTGCTTG 360
consensus_14177#1 ------------------------------------------------------------
consensus_14177#2 ------------------------------------------------------------
consensus_14177#0 GGGATGAAGCTGTTGCGCAAGCGCGACATTCCGGAGGAGAGGTATACCAATGCTTTTCTC 420
consensus_14177#1 ------------------------------------------------------------
consensus_14177#2 ------------------------------------------------------------
consensus_14177#0 GGGTACGGGCCTGAGGACTCGCATTTTGTTGTGGAGCTCACTTACAATTATGGTGTGGAA 480
consensus_14177#1 ------------------------------------------------------------
consensus_14177#2 ------------------------------------------------------------
consensus_14177#0 AGTTATGATATCGGGACTGCTTTCGGTCACTTCGGGATTGCTGTCGAGGACGTTGCAAAA 540
consensus_14177#1 ------------------------------------------------------------
consensus_14177#2 ------------------------------------------------------------
consensus_14177#0 ACAGTAGATCTCATTAAAGCCAAGGGAGGAACGGTAACAAGAGAACCAGGACCTGTAAAA 600
consensus_14177#1 ------------------------------------------------------------
consensus_14177#2 ------------------------------------------------------------
consensus_14177#0 GGTGGAAAGTCTGTAATTGCTTTTATTGAAGATCCTGATGGTTACAAATTTGAGCTTATA 660
consensus_14177#1 ------------------------------------------------------------
consensus_14177#2 ------------------------------------------------------------
consensus_14177#0 GAAAGAGGTCCTACACCTGAGCCTTTATGCCAGGTAATGCTTCGAGTGGGAGATCTTGAT 720
consensus_14177#1 ------------------------------------------------------------
consensus_14177#2 ------------------------------------------------------------
consensus_14177#0 CATGCTATCAATTTCTATGAGAAGGCATTTGGCATGGAACTTCTCCGGAAACGAGACAAT 780
consensus_14177#1 ------------------------------------------------------------
consensus_14177#2 TCTGCTATCAATTTCTATGAGAAGGCATTTGGCATGGAACTTCTCCGGAAACGAGACAAT 60
consensus_14177#0 CCCCAATACAAGTATACTATTGCAATGATGGGATATGGTCCTGAAGACAAAAATGCTGTA 840
consensus_14177#1 ------------------------------------------------------------
consensus_14177#2 CCCCAATACAAGGTTGGTACTTTTCGAAACCATTGCATGGATTTACCTCGTGACACTC-- 118
consensus_14177#0 CTGGAGTTGACCTACAACTATGGTGTCAAGGAATATGATAAAGGAAATGCTTATGCACAG 900
consensus_14177#1 ---------------------------GGGGGATCTTAGAATAATAATACTCCTAAGTAC 33
consensus_14177#2 ATGGCTTCTGTTTGCCCTGATGCTTTCTAATGTTATGCTCTACTACAAAGTACTAGACAA 178
* * * * * *
consensus_14177#0 ATTGCTATTAGCACAGATGATGTCTACAAGACTGCGGAAGTCATTAGACAAAATGGTGGA 960
consensus_14177#1 ATT-----TGTCAGAAAAAAAGTATATGCATATGCA----TTATTAGTT----TGTTGCA 80
consensus_14177#2 AC-------ATTCAAAAGAGCTTCCATCAATGTACC----TCATCACCTCCATTGCT--- 224
* * * * * * * * ** * ** *
consensus_14177#0 CAA-ATAACTCGTGAACCTGGCCCATTACCTGGAATTAATACGAAGATAACTG--CTTGC 1017
consensus_14177#1 TTACATATTTTGTGCCNTGCCTCTATTTTCATGAAG-AACCCGCAGTTTCTTC--CGTCT 137
consensus_14177#2 ----ATGACTTCTGT-TTGTCCTCATGGCTTCTGTTTGCCCTGATGCTTTCTAATCTGAT 279
** * ** ** * * * * *
consensus_14177#0 ACAGATCCAGATGGCTGGAAAACAG-TATTTGTTGATAATGTAGATTTTCTCAAGGAGTT 1076
consensus_14177#1 GATACATTAATTACCATAATTGCAGGTATTTGTTGATAATGTAGATTTCCTCAAGGAGTT 197
consensus_14177#2 CCTTGCTTAAGTGAGATAAGGAAAAACATGCACTACTACCTCGAAATATGAGAACATGTT 339
* * * * ** * ** * * ** ***
consensus_14177#0 GGAAGAATGAGTT-TTTGCCAATGAT---CTCATCTTGGTACAGGATTCAGAGGTTTTTC 1132
consensus_14177#1 GGAAGAATGAGTT-TTTGCCAATGAT---CTCATCGTGGTACATGATTCAGAGGTTTTTC 253
consensus_14177#2 AAATGCACTTTTTGTTTGTAAACTATTTGCTTAGTTCCATATCTTATACAGTGGTATCCT 399
* * * ** **** ** ** ** * ** ** *** *** *
consensus_14177#0 CCCTTGATTTGACATCTTGCGCCCTTGAAATCTTGTAAAAGCCACACCACCTCGAACTGA 1192
consensus_14177#1 CCCTTGATTTGACATCTTGCGCCCTTGAAATCTTGTAAAAGCCACACCACCTCGAACTGA 313
consensus_14177#2 GACTTA--CGGAGAACATGTTAAATGTAGCTATTATGGTTGT-ATCCTGATTTTTGCT-A 455
*** ** * * ** * * * ** * * * * * ** *
consensus_14177#0 GGTTTGTAGATAGGCCATGCAAATCTACCATTCCACAGTTGGTA--GT-TTAATAGAGCA 1249
consensus_14177#1 GGTTTGTAGATAGGCCATGCAAATCTACCATTCCACAGTTGGTA--GT-TTAATAGAGCA 370
consensus_14177#2 CATTCATACACTGGGT-TCAGACTTCAGACTTGGGTAGTAGGCATGGTATTGATAAAAC- 513
** ** * ** * * * * ** *** ** * ** ** *** * *
consensus_14177#0 TTAGATTACAACATTCCAAGCGATGTAGATGCGCAATCCATTTTGTTAGCGAAGTCAAAT 1309
consensus_14177#1 TTAGATTACAACATTCCAAGCGATGTAGATGCGCAATCCATTTTGTTAGCGAAGTCAAAT 430
consensus_14177#2 CGAAGTGATAGCAAGTTCCGC-ATGTGCATTTACTGGTTGTTTCATTATACATGCCA--- 569
* * * * ** ** **** ** * *** *** * * **
consensus_14177#0 CATATGTACAAATTTTGTTTTCCGGGTCAGAACT--ATTGTTCTTAATCAATCCATTTTA 1367
consensus_14177#1 CATATGTACAAATTTTGTTTTCCGGGTCAGAACT--ATTGNTCTTAATCAATCCATTTTA 488
consensus_14177#2 TTGGTTCTTATATTTCTTTCTAGAGATGGGAACTTCGTTGNTTTTAGGCA--TCATTTT- 626
* * **** ** * * * ***** *** * *** ** ******
consensus_14177#0 CATTCGAAAGTTAGCATTCCTGCTGTAGGACTTCTTGTCATTTGTATTCTATGTCATGGA 1427
consensus_14177#1 CATTCGAAAGTTAGCATTCCTGCTGTAGGACTTCTTGTCATTTGTATTCTATGTCATGGA 548
consensus_14177#2 ---TCTGGNGNTGACAAGCCTTTTTCTTTTCTTTTTGAAATCT-TANTCTCAAGCATGTT 682
** * * ** *** * *** *** ** * ** *** ****
consensus_14177#0 ATATGAATGAATGGTGGTAAGTATGGAATCAGCGAGTGAGGAGCACAAACGCTGAGAACT 1487
consensus_14177#1 ATATGAATGAATGGTGCTAAGTATGGAATCAGCGAGTGAGGAGCACAAACGCTGAGAACT 608
consensus_14177#2 ------------------------------------------------------------
consensus_14177#0 GAAAAGTCTTTTGTGCTTTATCCATGGGCGCCCTGGAAGAAAGGAGAGAAAGGTTACATG 1547
consensus_14177#1 GAAA-GTCTTTTGTGCTTTATCCATGGGCGCCCTGGAAGAAAGGAGAGAAAGGTTACAC- 666
consensus_14177#2 ------------------------------------------------------------
consensus_14177#0 TGATCTTTTACGTTGATATGGTGCCCATTTGACATGGAGCGAGATGGCGACAGTGTTCAT 1607
consensus_14177#1 ------TTTTTGTCAAT------------CAACA----GTCAGAAATTTCTAGTTTTCAC 704
consensus_14177#2 ------------------------------------------------------------
consensus_14177#0 CACTGTTAACATATGAAGGCATATTATATAGCAAAAGATTCTATGAATACCAGCGTCAGT 1667
consensus_14177#1 TATGGGTAA-ATCAGATTG-ATGCCACAT-GTGATCTTTTACGTTGATAT-GGTGCCCAT 760
consensus_14177#2 ------------------------------------------------------------
consensus_14177#0 GTAAGTTGAGTTTGACCTAGTTTTATTGACAATAATATTGGCAAAGT-TGTACTTTCATC 1726
consensus_14177#1 TTGACATGGGAGCGAGATGGCGACAGNGGTCAT--CACTGGTNACATATGAAGG------ 812
consensus_14177#2 ------------------------------------------------------------
consensus_14177#0 CAGATTTGTATAATTGTATGCATGGTTTTGGGACATTTTGTTTAAAAAAAAAAAAAAAAA 1786
consensus_14177#1 ------------------------------------------------------------
consensus_14177#2 ------------------------------------------------------------
consensus_14177#0 ACAAAGTCATGCCGTTACGTAGCGTATCGTGACAG 1821
consensus_14177#1 -----------------------------------
consensus_14177#2 -----------------------------------
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||