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Oryza sativa
cluster # 1457 cluster # 1457       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1457#0 length = 1417 sequences # 2  

consensusID : consensus_1457#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1417
fasta sequence
                              [GCCCCCGCCGCCGCCGCCTCGCCGCGGAAGTGAAAGCGCTCTCGACTCTCGCCGCCGCCGCCGCCGCCGCGAGCCGCGTCGTGCGGGAACGCGAGGGTTTTTCCAGGGGGATGGATTTGGGGTCGTGCTACCTCGGCGGCAACGCCGACGCGGTGGAGTTCTGCCCGCACCGCCCCTTCCGCCACGTCCTCGCCGCCGCCACCTACACGCTGCAGGAGCAGGGCGGGGAGCGGCAGGACCGCGCGGGCAGCGTGTCGCTCTTCGCCGTCGACGCCGGCGAGGAGGACGCGCCCCGGAGGCTCCGGCTGCTCCACACGGTGGAGACCGCCGGGGTGTTCGACATGAAGTGGAGCCCCGTGGCGCCTCTGCTCGCGCAGGCCGACGCCCACGGCCGCCTCGCGCTCTGGCGCCTGGAGCAGGAGGACGGATCGGACAAAGGTGCTGTTCTCAGGGATGTCTGTTCTGGAGACATTTCTTCTTCGATGTGCTTGTTTGTGGACTGGAACCAAACTGCCAAGGCACTTTCCGTTGGATTATCGGATGGTTCCCTGTCTGTGGTTTCCATGAGGGAGGACCGCTTGGAGGTATCAGAACAGTGGACTGCTCATCAGTATGAAGTGTGGACTTGCTATTTTGATCGTGCAAATCCACACTTGTTATACAGCGGATCAGACGACTGCTCCTTCAGCTGCTGGGACTTGCGACAGAACCCATCAAATGCTGTGTTTCAGAACAAAAAGTCGCATAATATGGGTGTCTGTTGCATTGCTCAGAATCCACTAGAGGGGAACATGCTACTTACTGGAAGCTATGATGAATTTCTCAGAGTTTGGGACATAAGATCAATGGTGAAACCCGTTAATGTGAAGTCCCTAAATTTAGGGGGTGGTGTATGGAGGATTAAATATCATCCTCTTATTGCAGATGTTGTCTTGGCTGCATGCATGCACAATGGGTTTGCCATTGTTAAAGTAGGTACTGGGGATGCTGCAGTAGTGGAAACATATTGCAAGCATGAGTCCTTAGCATATGGTGCGGATTGGCAGATAAATGAAGGTGCAGAACAGAACAAGAATTTTTCAGTTGTTGCTACCTGTTCATTTTATGATCGACTCCTCCGTGTGTGGCAACCGGAGAACCTAGGCAATCTTTAAGAGTGAAAGTGCCATTGCACTCAGTTCAAGTATCACTATGTGGACTTGTTTCCAGGTAGCTCCTCAAAGTTGTGCTGATTTATTTAAAGACATGAGCTTTTGGTAGAATCATGTCTGTTCCATAGCTTGTCATTCACATATATTTGTGTGATGCCAGCTTTCCCGTCGCAAAACTATATATTTGTATGGTCCTCAAAGATGTTTCCTGTTGATTATATTTGAAGTACTCCATTTTGTAGATTATATTGACGCTTTAACAACAA]

[+] EMBL AK111928             [GCCCCCGCCGCCGCCGCCTCGCCGCGGAAGTGAAAGCGCTCTCGACTCTCGCCGCCGCCGCCGCCGCCGCGAGCCGCGTCGTGCGGGAACGCGAGGGTTTTTCCAGGGGGATGGATTTGGGGTCGTGCTACCTCGGCGGCAACGCCGACGCGGTGGAGTTCTGCCCGCACCGCCCCTTCCGCCACGTCCTCGCCGCCGCCACCTACACGCTGCAGGAGCAGGGCGGGGAGCGGCAGGACCGCGCGGGCAGCGTGTCGCTCTTCGCCGTCGACGCCGGCGAGGAGGACGCGCCCCGGAGGCTCCGGCTGCTCCACACGGTGGAGACCGCCGGGGTGTTCGACATGAAGTGGAGCCCCGTGGCGCCTCTGCTCGCGCAGGCCGACGCCCACGGCCGCCTCGCGCTCTGGCGCCTGGAGCAGGAGGACGGATCGGACAAAGGTGCTGTTCTCAGGGATGTCTGTTCTGGAGACATTTCTTCTTCGATGTGCTTGTTTGTGGACTGGAACCAAACTGCCAAGGCACTTTCCGTTGGATTATCGGATGGTTCCCTGTCTGTGGTTTCCATGAGGGAGGACCGCTTGGAGGTATCAGAACAGTGGACTGCTCATCAGTATGAAGTGTGGACTTGCTATTTTGATCGTGCAAATCCACACTTGTTATACAGCGGATCAGACGACTGCTCCTTCAGCTGCTGGGACTTGCGACAGAACCCATCAAATGCTGTGTTTCAGAACAAAAAGTCGCATAATATGGGTGTCTGTTGCATTGCTCAGAATCCACTAGAGGGGAACATGCTACTTACTGGAAGCTATGATGAATTTCTCAGAGTTTGGGACATAAGATCAATGGTGAAACCCGTTAATGTGAAGTCCCTAAATTTAGGGGGTGGTGTATGGAGGATTAAATATCATCCTCTTATTGCAGATGTTGTCTTGGCTGCATGCATGCACAATGGGTTTGCCATTGTTAAAGTAGGTACTGGGGATGCTGCAGTAGTGGAAACATATTGCAAGCATGAGTCCTTAGCATATGGTGCGGATTGGCAGATAAATGAAGGTGCAGAACAGAACAAGAATTTTTCAGTTGTTGCTACCTGTTCATTTTATGATCGACTCCTCCGTGTGTGGCAACCGGAGAACCTAGGCAATCTTTAAGAGTGAAAGTGCCATTGCACTCAGTTCAAGTATCACTATGTGGACTTGTTTCCAGGTAGCTCCTCAAAGTTGTGCTGATTTATTTAAAGACATGAGCTTTTGGTAGAATCATGTCTGTTCCATAGCTTGTCATTCACATATATTTGTGTGATGCCAGCTTTCCCGTCGCAAAACTATATATTTGTATGGTCCTCAAAGATGTTTCCTGTTGATTATATTTGAAGTAC                                    ]
[+] EMBL AK099220             [                                       TCTCGACTCTCGCCGCCGCCGCCGCCGCCGCGAGCCGCGTCGTGCGGGAACGCGAGGGTTTTTCCAGGGGGATGGATTTGGGGTCGTGCTACCTCGGCGGCAACGCCGACGCGGTGGAGTTCTGCCCGCACCGCCCCTTCCGCCACGTCCTCGCCGCCGCCACCTACACGCTGCAGGAGCAGGGCGGGGAGCGGCAGGACCGCGCGGGCAGCGTGTCGCTCTTCGCCGTCGACGTCGGCGAGGAGGACGCGCCCCGGAGGCTCCGGCTGCTCCACACGGTGGAGACCGCCGGGGTGTTCGACATGAAGTGGAGCCCCGTGGCGCCTCTGCTCGCGCAGGCCGACGCCCACGGCCGCCTCGCGCTCTGGCGCCTGGAGCAGGAGGACGGATCGGACAAAGGTGCTGTTCTCAGGGATGTCTGTTCTGGAGACATTTCTTCTTCGATGTGCTTGTTTGTGGACTGGAACCAAACTGCCAAGGCACTTTCCGTTGGATTATCGGATGGTTCCCTGTCTGTGGTTTCCATGAGGGAGGACCGCTTGGAGGTATCAGAACAGTGGACTGCTCATCAGTATGAAGTGTGGACTTGCTATTTTGATCGTGCAAATCCACACTTGTTATACAGCGGATCAGACGACTGCTCCTTCAGCTGCTGGGACTTGCGACAGAACCCATCAAATGCTGTGTTTCAGAACAAAAAGTCGCATAATATGGGTGTCTGTTGCATTGCTCAGAATCCACTAGAGGGGAACATGCTACTTACTGGAAGCTATGATGAATTTCTCAGAGTTTGGGACATAAGATCAATGGTGAAACCCGTTAATGTGAAGTCCCTAAATTTAGGGGGTGGTGTATGGAGGATTAAATATCATCCTCTTATTGCAGATGTTGTCTTGGCTGCATGCATGCACAATGGGTTTGCCATTGTTAAAGTAGGTACTGGGGATGCTGCAGTAGTGGAAACATATTGCAAGCATGAGTCCTTAGCATATGGTGCGGATTGGCAGATAAATGAAGGTGCAGAACAGAACAAGAATTTTTCAGTTGTTGCTACCTGTTCATTTTATGATCGACTCCTCCGTGTGTGGCAACCGGAGAACCTAGGCAATCTTTAAGAGTGAAAGTGCCATTGCACTCAGTTCAAGTATCACTATGTGGACTTGTTTCCAGGTAGCTCCTCAAAGTTGTGCTGATTTATTTAAAGACATGAGCTTTTGGTAGAATCATGTCTGTTCCATAGCTTGTCATTCACATATATTTGTGTGATGCCAGCTTTCCCGTCGCAAAACTATATATTTGTATGGTCCTCAAAGATGTTTCCTGTTGATTATATTTGAAGTACTCCATTTTGTAGATTATATTGACGCTTTAACAACAA]


>consensus_1457#0 GCCCCCGCCGCCGCCGCCTCGCCGCGGAAGTGAAAGCGCTCTCGACTCTCGCCGCCGCCG CCGCCGCCGCGAGCCGCGTCGTGCGGGAACGCGAGGGTTTTTCCAGGGGGATGGATTTGG GGTCGTGCTACCTCGGCGGCAACGCCGACGCGGTGGAGTTCTGCCCGCACCGCCCCTTCC GCCACGTCCTCGCCGCCGCCACCTACACGCTGCAGGAGCAGGGCGGGGAGCGGCAGGACC GCGCGGGCAGCGTGTCGCTCTTCGCCGTCGACGCCGGCGAGGAGGACGCGCCCCGGAGGC TCCGGCTGCTCCACACGGTGGAGACCGCCGGGGTGTTCGACATGAAGTGGAGCCCCGTGG CGCCTCTGCTCGCGCAGGCCGACGCCCACGGCCGCCTCGCGCTCTGGCGCCTGGAGCAGG AGGACGGATCGGACAAAGGTGCTGTTCTCAGGGATGTCTGTTCTGGAGACATTTCTTCTT CGATGTGCTTGTTTGTGGACTGGAACCAAACTGCCAAGGCACTTTCCGTTGGATTATCGG ATGGTTCCCTGTCTGTGGTTTCCATGAGGGAGGACCGCTTGGAGGTATCAGAACAGTGGA CTGCTCATCAGTATGAAGTGTGGACTTGCTATTTTGATCGTGCAAATCCACACTTGTTAT ACAGCGGATCAGACGACTGCTCCTTCAGCTGCTGGGACTTGCGACAGAACCCATCAAATG CTGTGTTTCAGAACAAAAAGTCGCATAATATGGGTGTCTGTTGCATTGCTCAGAATCCAC TAGAGGGGAACATGCTACTTACTGGAAGCTATGATGAATTTCTCAGAGTTTGGGACATAA GATCAATGGTGAAACCCGTTAATGTGAAGTCCCTAAATTTAGGGGGTGGTGTATGGAGGA TTAAATATCATCCTCTTATTGCAGATGTTGTCTTGGCTGCATGCATGCACAATGGGTTTG CCATTGTTAAAGTAGGTACTGGGGATGCTGCAGTAGTGGAAACATATTGCAAGCATGAGT CCTTAGCATATGGTGCGGATTGGCAGATAAATGAAGGTGCAGAACAGAACAAGAATTTTT CAGTTGTTGCTACCTGTTCATTTTATGATCGACTCCTCCGTGTGTGGCAACCGGAGAACC TAGGCAATCTTTAAGAGTGAAAGTGCCATTGCACTCAGTTCAAGTATCACTATGTGGACT TGTTTCCAGGTAGCTCCTCAAAGTTGTGCTGATTTATTTAAAGACATGAGCTTTTGGTAG AATCATGTCTGTTCCATAGCTTGTCATTCACATATATTTGTGTGATGCCAGCTTTCCCGT CGCAAAACTATATATTTGTATGGTCCTCAAAGATGTTTCCTGTTGATTATATTTGAAGTA CTCCATTTTGTAGATTATATTGACGCTTTAACAACAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)