cluster # 15286

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Oryza sativa
cluster # 15286 cluster # 15286 Sequences # 21 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_15286#0 length = 1635 sequences # 18

consensus_15286#1 length = 464 sequences # 2
consensus_15286#2 length = 305 sequences # 1

consensusID : consensus_15286#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 18
consensus length = 1635
fasta sequence

                              [CTGCGGCTGCTGTTGCACAAGTAGCATCACCAACCTCTCCCTGTCTATCCCATATTATTCGTCTCCTTGCTTGCTTCTCTGAATATCATCAGAGCTTGTTCAGACTGTGTCCCTGTTCTTGCTCAGCTTCTAATCCAGGGATACACAGAGATATCGCCCTTTTTTGGCAGTGATTATCTCTCTCTCTAGCTTGGTTGAGAGAGAAGAACAGCAGCTCTTGCTTGCCTCCTTACTTTCTTCTTGGTGTTCTTGGAGAGAGAGGGAGAGGATTAGAGGTTGTGATAGATGGGTAATTGCTGGTTTAGAGGGAGCTTAATTGTTAACAGAGTCTCTTCTAATGCGAAGCCAGAGACTCCCAAGATCCAGAGCCCATCGGAGAGGGACCGGAGCGACGAGAGCAAGCTGCCATCGAACGCCAAGGAGGTGGAGGCGATGCGGTTGGACTCGTCGGCGCGCAACCCGCTCGTCGCCTTCTCCTTCGA-GGAGCTCAGGGCGGTCACCAGCAACTTCCGCCAGGACTCCCTCATCGGC-GGCGGCGGCTTCGGCCGCGTCTACAAGGGCGCCGTCGCCGCCTCCGCCGCCGGCGACGGCGACGGCGCCGAGCCCCAGCCCGTCGCCGTCAAGGTCCACGACGGCGACAACAGCTTCCAGGGCCACCGCGAGTGGCTGGCGGAGGTGATCTTCCTGGGCCATCTGTCGCACCCCAACCTGGTGAGGCTCGTCGGATACTGCTGCGAGGGCGACCACCGGCTGCTCGTCTACGAGTACATGCCACGCGGCAGCGTCGAGTCCCACCTCTTCTCCCGGGTGATGGCGCCGCTGTCGTGGGCGACGCGGATGAAGATCGCGCTGGGCGCGGCGAGGGGGCTCGCGTTCCTCCACGAGGCCGAGAAGCCTGTCATCTACCGCGACTTCAAGACCTCCAACATCCTCCTCGACGAGGAGTTCAACGCGAAGCTGTCGGACTTCGGGCTGGCGAAGGACGGGCCGGTGGGGGACAAGTCGCACGTGTCGACGCGGATCATGGGCACCTACGGCTACGCGGCGCCGGAGTACGTCATGACCGGCCACCTCACGGCCATGAGCGACGTCTACAGCTACGGCGTCGTCCTCCTCGAGCTCCTCACCGGCCGCAAGTCGCTCGACAAGTCCCGCCCCCCGCGGGAGCAGACGCTCGCCGACTGGGCGCTCCCCCTCCTCACCCACAAGCGCAAGGTCATGTCCATCGTCGACCCCCGCCTCTCCGCCGCCGCCGCCGCCGCCGGCGCAGGCGGCGAGCTGCCGGCGAGGGCGGTGCACAAGGCGGCGATGCTGGCGTACCACTGCCTGAACCGGAACCCCAAGGCGAGGCCGCTCATGCGGGACATCGTCGCGTCGCTCGAGCCGCTGCAGGCCGACGACGAGGCGCGCGACGCCGCCGGCGCCTGAGAAGAAGGGAGAGGGACGCAGATGTTGTTGGGATTAATTAATTAAAGCTGTATCATAATGAAAATCAAAAGATTTGGTAGTGCAGCAAGGGGGTAGGTGTAGTGATTAGCGGTTGAGTTGAGCTGAGTGTACGAACGTTGTTAATGTGCAGGGAAGATGATTAATTAATTAATTAATTACTTAAAAATCTGAAAAAAAAAAAAAAAA]

[+] EMBL OSS14470A            [CTGCGGCTGCTGTTGCACAAGTAGCATCACCAACCTCTCCCTGTCTATCCCATATTATTCGTCTCCTTGCTTGCTTCTCTGAATATCATCAGAGCTTGTNCAGACTGTGTCCCTGTTCTTGCTCAGCTTCTAATCCAGGGATACACAGAGATATCGCCCTTTTTTGGCAGTGATTATCTCTCTCTCTAGCTTGGTTGAGAGAGAAGAACAGCAGCTCTTGCTTGCCTCCTTACTTTCTTCTTGGTGTTCTTGGAGAGAGAGGGAGAGGATTAGAGGTTGTGATAGATGGGTAATTGCTGGTTTAGAGGGAGCTTAATTGTTAACAGAGTCTCTTCTAATGCGAAGCAAGAGACTCCCAAGATCCAGAG CCATCGGAGAGGGACCGGAGCGACGAGAGCAAGCTGCCATCG ACGCCAAGGAGGTTGAGGCGAT CGGTTGa                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL AK106265             [                                                       TATTCGTCTCCTTGCTTGCTTCTCTGAATATCATCAGAGCTTGTTCAGACTGTGTCCCTGTTCTTGCTCAGCTTCTAATCCAGGGATACACAGAGATATCGCCCTTTTTTGGCAGTGATTATCTCTCTCTCTAGCTTGGTTGAGAGAGAAGAACAGCAGCTCTTGCTTGCCTCCTTACTTTCTTCTTGGTGTTCTTGGAGAGAGAGGGAGAGGATTAGAGGTTGTGATAGATGGGTAATTGCTGGTTTAGAGGGAGCTTAATTGTTAACAGAGTCTCTTCTAATGCGAAGCCAGAGACTCCCAAGATCCAGAGCCCATCGGAGAGGGACCGGAGCGACGAGAGCAAGCTGCCATCGAACGCCAAGGAGGTGGAGGCGATGCGGTTGGACTCGTCGGCGCGCAACCCGCTCGTCGCCTTCTCCTTCGA GGAGCTCAGGGCGGTCACCAGCAACTTCCGCCAGGACTCCCTCATCGGC GGCGGCGGCTTCGGCCGCGTCTACAAGGGCGCCGTCGCCGCCTCCGCCGCCGGCGACGGCGACGGCGCCGAGCCCCAGCCCGTCGCCGTCAAGGTCCACGACGGCGACAACAGCTTCCAGGGCCACCGCGAGTGGCTGGCGGAGGTGATCTTCCTGGGCCATCTGTCGCACCCCAACCTGGTGAGGCTCGTCGGATACTGCTGCGAGGGCGACCACCGGCTGCTCGTCTACGAGTACATGCCACGCGGCAGCGTCGAGTCCCACCTCTTCTCCCGGGTGATGGCGCCGCTGTCGTGGGCGACGCGGATGAAGATCGCGCTGGGCGCGGCGAGGGGGCTCGCGTTCCTCCACGAGGCCGAGAAGCCTGTCATCTACCGCGACTTCAAGACCTCCAACATCCTCCTCGACGAGGAGTTCAACGCGAAGCTGTCGGACTTCGGGCTGGCGAAGGACGGGCCGGTGGGGGACAAGTCGCACGTGTCGACGCGGATCATGGGCACCTACGGCTACGCGGCGCCGGAGTACGTCATGACCGGCCACCTCACGGCCATGAGCGACGTCTACAGCTACGGCGTCGTCCTCCTCGAGCTCCTCACCGGCCGCAAGTCGCTCGACAAGTCCCGCCCCCCGCGGGAGCAGACGCTCGCCGACTGGGCGCTCCCCCTCCTCACCCACAAGCGCAAGGTCATGTCCATCGTCGACCCCCGCCTCTCCGCCGCCGCCGCCGCCGCCGGCGCAGGCGGCGAGCTGCCGGCGAGGGCGGTGCACAAGGCGGCGATGCTGGCGTACCACTGCCTGAACCGGAACCCCAAGGCGAGGCCGCTCATGCGGGACATCGTCGCGTCGCTCGAGCCGCTGCAGGCCGACGACGAGGCGCGCGACGCCGCCGGCGCCTGAGAAGAAGGGAGAGGGACGCAGATGTTGTTGGGATTAATTAATTAAAGCTGTATCATAATGAAAATCAAAAGATTTGGTAGTGCAGCAAGGGGGTAGGTGTAGTGATTAGCGGTTGAGTTGAGCTGAGTGTACGAACGTTGTTAATGTGCAGGGAAGATGATTAATTAATTAATTAATTACT                          ]
[+] EMBL AK072305             [                                                                                            AGCTTGTTCAGACTGTGTCCCTGTTCTTGCTCAGCTTCTAATCCAGGGATACACAGAGATATCGCCCTTTTTTGGCAGTGATTATCTCTCTCTCTAGCTTGGTTGAGAGAGAAGAACAGCAGCTCTTGCTTGCCTCCTTACTTTCTTCTTGGTGTTCTTGGAGAGAGAGGGAGAGGATTAGAGGTTGTGATAGATGGGTAATTGCTGGTTTAGAGGGAGCTTAATTGTTAACAGAGTCTCTTCTAATGCGAAGCCAGAGACTCCCAAGATCCAGAGCCCATCGGAGAGGGACCGGAGCGACGAGAGCAAGCTGCCATCGAACGCCAAGGAGGTGGAGGCGATGCGGTTGGACTCGTCGGCGCGCAACCCGCTCGTCGCCTTCTCCTTCGA GGAGCTCAGGGCGGTCACCAGCAACTTCCGCCAGGACTCCCTCATCGGC GGCGGCGGCTTCGGCCGCGTCTACAAGGGCGCCGTCGCCGCCTCCGCCGCCGGCGACGGCGACGGCGCCGAGCCCCAGCCCGTCGCCGTCAAGGTCCACGACGGCGACAACAGCTTCCAGGGCCACCGCGAGTGGCTGGCGGAGGTGATCTTCCTGGGCCATCTGTCGCACCACAACCTGGTGAGGCTCGTCGGATACTGCTGCGAGGGCGACCACCGGCTGCTCGTCTACGAGTACATGCCACGCGGCAGCGTCGAGTCCCACCTCTTCTCCCGGGTGATGGCGCCGCTGTCGTGGGCGACGCGGATGAAGATCGCGCTGGGCGCGGCGAGGGGGCTCGCGTTCCTCCACGAGGCCGAGAAGCCTGTCATCTACCGCGACTTCAAGACCTCCAACATCCTCCTCGACGAGGAGTTCAACGCGAAGCTGTCGGACTTCGGGCTGGCGAAGGACGGGCCGGTGGGGGACAAGTCGCACGTGTCGACGCGGATCATGGGCACCTACGGCTACGCGGCGCCGGAGTACGTCATGACCGGCCACCTCACGGCCATGAGCGACGTCTACAGCTACGGCGTCGTCCTCCTCGAGCTCCTCACCGGCCGCAAGTCGCTCGACAAGTCCCGCCCCCCGCGGGAGCAGACGCTCGCCGACTGGGCGCTCCCCCTCCTCACCCACAAGCGCAAGGTCATGTCCATCGTCGACCCCCGCCTCTCCGCCGCCGCCGCCGCCGCCGGCGCAGGCGGCGAGCTGCCGGCGAGGGCGGTGCACAAGGCGGCGATGCTGGCGTACCACTGCCTGAACCGGAACCCCAAGGCGAGGCCGCTCATGCGGGACATCGTCGCGTCGCTCGAGCCGCTGCAGGCCGACGACGAGGCGCGCGACGCCGCCGGCGCCTGAGAAGAAGGGAGAGGGACGCAGATGTTGTTGGGATTAATTAATTAAAGCTGTATCATAATGAAAATCAAAAGATTTGGTAGTGCAGCAAGGGGGTAGGTGTAGTGATTAGCGGTTGAGTTGAGCTGAGTGTACGAACGTTGTTAATGTGCAGGGAAGATGATTAATTAATTAA                                   ]
[+] EMBL AU056755             [                                                                                                                                  TAATCCAGGGATACACAGAGATATCGCCCTTTTTTGGCAGTGATTATCTCTCTCTCTAGCTTGGTTGAGAGAGAAGAACAGCAGCTCTTGCTTGCCTCCTTACTTTCTTCTTGGTGTTCTTGGAGAGAGAGGGAGAGGATTAGAGGTTGTGATAGATGGGTAATTGCTGGTTTAGAGGGAGCTTAATTGTTAACAGAGTCTCTTCTAATGCGAA CCAGAGACTCCCAAGATCCAGAGCCCATCGGAGAGGGACCGGAGCGACGAGAGCAAGCTGCCATCGAACGCCAAGGAGGTGGAGGCGATGCGGTTGGACTCGTCGGCGCGCAACCCGCTCGTCGCCTTCTCCTTCGAGGGAGCTCAGGGCGGTCACCAGCAACTTCCGCCAGGACTCCCTCATCGGCGGGCGGCGGCTTCGGCCGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CB638733             [                                                                                                                                    ATCCAGGGATACACAGAGATATCGCCCTTTTTTGGCAGTGATTATCTCTCTCTCTAGCTTGGTTGAGAGAGAAGAACAGCAGCTCTTGCTTGCCTCCTTACTTTCTTCTTGGTGTTCTTGGAGAGAGAGGGAGAGGATTAGAGGTTGTGATAGATGGGTAATTGCTGGTTTAGAGGGAGCTTAATTGTTAACAGAGTCTCTTCTAATGCGAAGCCAGAGACTCCCAAGATCCAGAGCCCATCGGAGAGGGACCGGAGCGACGAGAGCAAGCTGCCATCGAACGCCAAGGAGGTGGAGGCGATGCGGTTGGACTCGTCGGCGCGCAACCCGCTCGTCGCCTTCTCCTTCGA GGAGCTCAGGGCGGTCACCAGCAACTTCCGCCAGGACTCCCTCATCGGC GGCGGCGGCTTCGGCCGCGTCTAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CB640646             [                                                                                                                                                            CCCTTTTTTGGCAGTGATTATCTCTCTCTCTAGCTTGGTTGAGAGAGAAGAACAGCAGCTCTTGCTTGCCTCCTTACTTTCTTCTTGGTGTTCTTGGAGAGAGAGGGAGAGGATTAGAGGTTGTGATAGATGGGTAATTGCTGGTTTAGAGGGAGCTTAATTGTTAACAGAGTCTCTTCTAATGCGAAGCCAGAGACTCCCAAGATCCAGAGCCCATCGGAGAGGGACCGGAGCGACGAGAGCAAGCTGCCATCGAACGCCAAGGAGGTGGAGGCGATGCGGTTGGACTCGTCGGCGCGCAACCCGCTCGTCGCCTTCTCCTTCGA GGAGCTCAGGGCGGTCACCAGCAACTTCCGCCAGGACTCCCTCATCGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CB640642             [                                                                                                                                                            CCCTTTTTTGGCAGTGATTATCTCTCTCTCTAGCTTGGTTGAGAGAGAAGAACAGCAGCTCTTGCTTGCCTCCTTACTTTCTTCTTGGTGTTCTTGGAGAGAGAGGGAGAGGATTAGAGGTTGTGATAGATGGGTAATTGCTGGTTTAGAGGGAGCTTAATTGTTAACAGAGTCTCTTCTAATGCGAAGCCAGAGACTCCCAAGATCCAGAGCCCATCGGAGAGGGACCGGAGCGACGAGAGCAAGCTGCCATCGAACGCCAAGGAGGTGGAGGCGATGCGGTTGGACTCGTCGGCGCGCAACCCGCTCGTCGCCTTCTCCTTCGA GGAGCTCAGGGCGGTCACCAGCAACTTCCGCCAGGACTCCCTCATCGGC GGCGGCGGCTTCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL OSS2168A             [                                                                                                                                                           ccgCTTTTTTGGCAGTNATTATCTNTCTCTCTAGCTTGGTTGAGAGAGAAGAACAGCAGCTCTTGCTTGCCTCCTTACTTTCTTCTTGGTGTTCTTGGAGAGAGAGGGAGAGGATTAGAGGTTGTGATAGATGGGTAATTGCTGGTTTAGAGGGAGCTTAATTGTTAACAGAGTCTCTTCTAATGCGAAGCANNAGACTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL OSR10352B            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GATCTTCCTGGGCCATCTGTCGCACCCCAACCTGGTGAGGCTCGTCGGATACTGCTGCGAGGGCGACCACCGGCTGCTCGTCTACGAGTACATGCCACGCGGCAGCGTCGAGTCCCACCTCTTCTCCCGGGTGATGGCGCCGCTGTCGTGGGCGACGCGGATGAAGATCGCGCTGGGCG GGCGAGGGGGCTCGCGTTCCTCCACGAGGCCGAGAAGCCTGTCATCTACCGCGACTTCAAGACCTCCAACATCCTCCTCGACGAGGAGTTCAACGCGAAG TGTCGGACTTCGGGCTGGCGAAGGACGNGCCGGTGGGGGACAAGTCGCACGTGTCGACGCGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CA756388             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     CGTCTACGAGTACATGCCACGCGGCAGCGTCGAGTCCCACCTCTTCTCCCGGGTGATGGCGCCGCTGTCGTGGGCGACGCGGATGAAGATCGCGCTGGGCGCGGCGAGGGGGCTCGCGTTCCTCCACGAGGCCGAGAAGCCTGTCATCTACCGCGACTTCAAGACCTCCAACATCCTCCTCGACGAGGAGTTCAACGCGAAGCTGTCGGACTTCGGGCTGGCGAAGGACGGGCCGGTGGGGGACAAGTCGCACGTGTCGACGCGGATCATGGGCACCTACGGCTACGCGGCGCCGGAGTACGTCATGACCGGCCACCTCACGGCCATGAGCGACGTCTACAGCTACGGCGTCGTCCTCCTCGAGCTCCTCACCGGCCGCAAGTCGCTCGACAAGTCCCGCCCCCCGCGGGAGCAGACGCTCGCCGACTGGGCGCTCCCCCTCCTCACCCACAAGCGCAAGGTCATGTCCATCGTCGACCCCCGCCTCTCCGCCGCCGCCGCCGCCGCCGGNGCAGGCGGCGAGCTGCCGGCGAGGGCGGTGCACAAGGCGGCGATGCTGGCGTACCACTGCCTGAACCGGAACCCCNAGGCGAGGCCGCTCAT                                                                                                                                                                                                                                                                                     ]
[-] EMBL CB679511             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       atcattcAGGAGTTCAACGCGAAGCTGTCGGACTTCGGGCTGGCGAAGGACGGGCCGGTGGGGGACAAGTCGCACGTGTCGACGCGGATCATGGGCACCTACGGCTACGCGGCGCCGGAGTACGTCATGACCGGCCACCTCACGGCCATGAGCGACGTCTACAGCTACGGCGTCGTCCTCCTCGAGCTCCTCACCGGCCGCAAGTCGCTCGACAAGTCCCGCCCCCCGCGGGAGCAGACGCTCGCCGACTGGGCGCTCCCCCTCCTCACCCACAAGCGCAAGGTCATGTCCATCGTCGACCCCCGCCTCTCCGCCGCCGCCGCCGCCGCCGGCGCAGGCGGCGAGCTGCCGGCGAGGGCGGTGCACAAGGCGGCGATGCTGGCGTACCACTGCCTGAACCGGAACCCCAAGGCGAGGCCGCTCATGCGGGACATCGTCGCGTCGCTCGAGCCGCTGCAGGCCGACGACGAGGCGCGCGACGCCGCCGGCGCCTGAGAAGAAGGGAGAGGGACGCAGATGTTGTTGGGATTAATTAATTAAAGCTGTATCATAATGAAAATCAAAAGATTTGGTAGTGCAGCAAGGGGGTAGGTGTAGTGATTAGCGGTTGAGTTGAGCTGAGTGTACGAACGTTGTTAATGACGAGGGAAGATGATTAATTAATTAATTAATTACTT                         ]
[+] EMBL CB679510             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               GGAGTCCTACGCGAAGCTGTCGGACTTCGGGCTGGCGAAGGACGGGCCGGTGGGGGACAAGTCGCACGTGTCGACGCGGATCATGGGCACCTACGGCTACGCGGCGCCGGAGTACGTCATGACCGGCCACCTCACGGCCATGAGCGACGTCTACAGCTACGGCGTCGTCCTCCTCGAGCTCCTCACCGGCCGCAAGTCGCTCGACAAGTCCCGCCCCCCGCGGGAGCAGACGCTCGCCGACTGGGCGCTCCCCCTCCTCACCCACAAGCGCAAGGTCATGTCCATCGTCGACCCCCGCCTCTCCGCCGCCGCCGCCGCCGCCGGCGCAGGCGGCGAGCTGCCGGCGAGGGCGGTGCACAAGGCGGCGATGCTGGCGTACCACTGCCTGAACCGGAACCCCAAGGCGAGGCCGCTCATGCGGGACATCGTCGCGTCGCTCGAGCCGCTGCAGGCCGACGACGAGGCGCGCGACGCCGCCGGCGCCTGAGAAGAAGGGAGAGGGACGCAGATGTTGTTGGGATTAATTAATTAAAGCTGTATCATAATGAAAATCAAAAGATTTGGTAGTGCAGCAAGGGGGTAGGTGTAGTGATTAGCGGTTGAGTTGAGCTGAGTGTACGAACGTTGTTAATGTGCAGGGAAGATGATTAATTAATTAA                                   ]
[+] EMBL AU222681             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   CGGACTTCGGGCTGGCGAAGGACGGGCCGGTGGGGGACAAGTCGCACGTGTCGACGCGGATCATGGGCACCTACGGCTACGCGGCGCCGGAGTACGTCATGACCGGCCACCTCACGGCCATGAGCGACGTCTACAGCTACGGCGTCGTCCTCCTCGAGCTCCTCACCGGCCGCAAGTCGCTCGACAAGTCCCGCCCCCCGCGGGAGCAGACGCTCGCCGACTGGGCGCTCCCCCTCCTCACCCACAAGCGCAAGGTCATGTCCATCGTCGACCCCCGCCTCTCCGCCGCCGCCGCCGCCGCCGGCGCAGGCGGCGAGCTGCCGGCGAGGGCGGTGCACAAGGCGGCGATGCTGGCGTACCACTGCCTGAACCGGAACCCCAAGGCGAGGCCGCTCATGCGGGACATCGTCGCGTCGCTCGAGCCGCTGCAGGCCGACGACGAGGCGCG                                                                                                                                                                                                                                  ]
[+] EMBL CB658007             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              CCTCACCCACAAGCGCAAGGTCATGTCCATCGTCGACCCCCGCCTCTCCGCCGCCGCCGCCGCCGCCGGCGCAGGCGGCGAGCTGCCGGCGAGGGCGGTGCACAAGGCGGCGATGCTGGCGTACCACTGCCTGAACCGGAACCCCAAGGCGAGGCCGCTCATGCGGGACATCGTCGCGTCGCTCGAGCCGCTGCAGGCCGACGACGAGGCGCGCGACGCCGCCGGCGCCTGAGAAGAAGGGAGAGGGACGCAGATGTTGTTGGGATTAATTAATTAAAGCTGTATCATAATGAAAATCAAAAGATTTGGTAGTGCAGCAAGGGGGTAGGTGTAGTGATTAGCGGTTGAGTTGAGCTGAGTGTACGAACGTTGTTAATGTGCAGGGAAGATGATTAATTAATTAATTAATTACT                          ]
[+] EMBL AU174251             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GCGGTGCACAAGGCGGCGATGCTGGCGTACCNCTGCCTGAACCGGAACCCCAAGGCGAGGCCGCTCATGCGGGACATCGTCGCGTCGCTCGAGCCGCTGCAGGCCGACGACGAGGCGCGCGACGCCGCCGGCGCCTGAGAAGAAGGGAGAGGGACGCAGATGTTGTTGGGATTAATTAATTAAAGCTGTATCATAATGAAAATCAAAAGATTTGGTAGTGCAGCAAGGGGGTAGGTGTAGTGATTAGCGGTTGAGTTGAGCTGAGTGTACGAACGTTGTTAATGTGCAGGGAAGATGATTAATTAATTAATTAATTACTTAAAAA                    ]
[+] EMBL C22647               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         CGGCGATGCTGGCGTACCACTGCCTGAACCGGAACCCCAAGGCGAGGCCGCTCATGCGGGACATNGTCGCGTCGCTCGAGCCGCTGCAGGCCGACGACGAGGCGCGCGACNCCGCCGGCNCCTGAGAAGAAGGGAGAGGGACGCAGATGTTGTTGGGATTAATTAATTAAAGCTGTATCATAATGAAAATCAAAAGATTTGGTAGTGCAGCAAGGGGGTAGGTGTAGTGATTAGCGGTTGAGTTGAGCTGAGTGTACGAACGTTGTTAATGTGCAGGGAAGATGATTAATTAATTAATTAATTACTTAATTTTCTGAAAAAAAAAAAAAAAA]
[+] EMBL C22582               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ccaACTGCCTGAACCGGAACCCCAAGGCGAGGCCGCTCATGCGGGACATCGTCGCGTCGCTCGAGCCGCTGCAGGCCGACGNCGAGGCGCGCGACNCCGCCGGCGCCTGAGAAGAAGGGNGAGGGACGCAGATGTTGTTGGGATTAATTAATTAAAGCTGTATCATAATGAAAATCAAAAGATTTGGTNGTGCAGCAAGGGGGTAGGTGTNGTGATTAGCGGTTGAGTTGAGCTGNGNGTACGAACGTTGTTNATGTGCNGGGNNGATGATTAATTAATTAATTAATTACTT   NATTTTAAAAAAAAAAAA    ]
[+] EMBL CB621853             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            AGGCGCGCGACGCCGCCGGCGCCTGAGAAGAAGGGAGAGGGACGCAGATGTTGTTGGGATTAATTAATTAAAGCTGTATCATAATGAAAATCAAAAGATTTGGTAGTGCAGCAAGGGGGTAGGTGTAGTGATTAGCGGTTGAGTTGAGTTGAGTGTACGAACGTTGTTAATGTGCAGGGAAGATGATTAATTAATTAA                                   ]




>consensus_15286#0
CTGCGGCTGCTGTTGCACAAGTAGCATCACCAACCTCTCCCTGTCTATCCCATATTATTC
GTCTCCTTGCTTGCTTCTCTGAATATCATCAGAGCTTGTTCAGACTGTGTCCCTGTTCTT
GCTCAGCTTCTAATCCAGGGATACACAGAGATATCGCCCTTTTTTGGCAGTGATTATCTC
TCTCTCTAGCTTGGTTGAGAGAGAAGAACAGCAGCTCTTGCTTGCCTCCTTACTTTCTTC
TTGGTGTTCTTGGAGAGAGAGGGAGAGGATTAGAGGTTGTGATAGATGGGTAATTGCTGG
TTTAGAGGGAGCTTAATTGTTAACAGAGTCTCTTCTAATGCGAAGCCAGAGACTCCCAAG
ATCCAGAGCCCATCGGAGAGGGACCGGAGCGACGAGAGCAAGCTGCCATCGAACGCCAAG
GAGGTGGAGGCGATGCGGTTGGACTCGTCGGCGCGCAACCCGCTCGTCGCCTTCTCCTTC
GAGGAGCTCAGGGCGGTCACCAGCAACTTCCGCCAGGACTCCCTCATCGGCGGCGGCGGC
TTCGGCCGCGTCTACAAGGGCGCCGTCGCCGCCTCCGCCGCCGGCGACGGCGACGGCGCC
GAGCCCCAGCCCGTCGCCGTCAAGGTCCACGACGGCGACAACAGCTTCCAGGGCCACCGC
GAGTGGCTGGCGGAGGTGATCTTCCTGGGCCATCTGTCGCACCCCAACCTGGTGAGGCTC
GTCGGATACTGCTGCGAGGGCGACCACCGGCTGCTCGTCTACGAGTACATGCCACGCGGC
AGCGTCGAGTCCCACCTCTTCTCCCGGGTGATGGCGCCGCTGTCGTGGGCGACGCGGATG
AAGATCGCGCTGGGCGCGGCGAGGGGGCTCGCGTTCCTCCACGAGGCCGAGAAGCCTGTC
ATCTACCGCGACTTCAAGACCTCCAACATCCTCCTCGACGAGGAGTTCAACGCGAAGCTG
TCGGACTTCGGGCTGGCGAAGGACGGGCCGGTGGGGGACAAGTCGCACGTGTCGACGCGG
ATCATGGGCACCTACGGCTACGCGGCGCCGGAGTACGTCATGACCGGCCACCTCACGGCC
ATGAGCGACGTCTACAGCTACGGCGTCGTCCTCCTCGAGCTCCTCACCGGCCGCAAGTCG
CTCGACAAGTCCCGCCCCCCGCGGGAGCAGACGCTCGCCGACTGGGCGCTCCCCCTCCTC
ACCCACAAGCGCAAGGTCATGTCCATCGTCGACCCCCGCCTCTCCGCCGCCGCCGCCGCC
GCCGGCGCAGGCGGCGAGCTGCCGGCGAGGGCGGTGCACAAGGCGGCGATGCTGGCGTAC
CACTGCCTGAACCGGAACCCCAAGGCGAGGCCGCTCATGCGGGACATCGTCGCGTCGCTC
GAGCCGCTGCAGGCCGACGACGAGGCGCGCGACGCCGCCGGCGCCTGAGAAGAAGGGAGA
GGGACGCAGATGTTGTTGGGATTAATTAATTAAAGCTGTATCATAATGAAAATCAAAAGA
TTTGGTAGTGCAGCAAGGGGGTAGGTGTAGTGATTAGCGGTTGAGTTGAGCTGAGTGTAC
GAACGTTGTTAATGTGCAGGGAAGATGATTAATTAATTAATTAATTACTTAAAAATCTGA
AAAAAAAAAAAAAAA

consensusID : consensus_15286#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 464
fasta sequence

                              [TCGCTAGACAAGTCCCCCCCCCCGCGGGAGCAAACGCTCCCCGATTGGGGGTTCCCCCTCCTCCCCCCCAAGGGCAAGGTCATGTCCATTGTGGACCCCCGCTTTTCCGCCGCCGCCGCCGCCGCCGGGGCAGGGGGCGAGCTCCCGGCGAGGGCGGTGCCCAAGGCGGCGATGTTGGGGTACCACTGCTTGAACCGGAACCCCAAGGGGAGGCCGTTCATGCGGGACATTGTCGGGTCGCTCGAGCCGCTGCAGGCCGACGACGAGGGGCGCGACCCCCCCGGGGCCTGAAAAAAAGGGAAAGGGACCCAAATGTTGTTGGGATTAATTAATTAAAGCTGTATCATAATGAAAATCAAAAGATTTGGTAGTGCACCAAGGGGGTAGGTGTAGTGATTAGCGGTTGAGTTGAGCTGAGTGTACGAACGTTGTTAATGTGCAGGGAAGATGATTAATTAATTAAT]

[-] EMBL CB638734             [TCGCTAGACAAGTCCCCCCCCCCGCGGGAGCAAACGCTCCCCGATTGGGGGTTCCCCCTCCTCCCCCCCAAGGGCAAGGTCATGTCCATTGTGGACCCCCGCTTTTCCGCCGCCGCCGCCGCCGCCGGGGCAGGGGGCGAGCTCCCGGCGAGGGCGGTGCCCAAGGCGGCGATGTTGGGGTACCACTGCTTGAACCGGAACCCCAAGGGGAGGCCGTTCATGCGGGACATTGTCGGGTCGCTCGAGCCGCTGCAGGCCGACGACGAGGGGCGCGACCCCCCCGGGGCCTGAAAAAAAGGGAAAGGGACCCAAATGTTGTTGGGATTAATTAATTAAAGCTGTATCATAATGAAAATCAAAAGATTTGGTAGTGCACCAAGGGGGTAGGTGTAGTGATTAGCGGTTGAGTTGAGCTGAGTGTACGAACGTTGTTAATGTGCAGGGAAGATGATTAATTAATTAAT]
[-] EMBL CA764002             [                                                                                                                                                                                                                                                                                                                                                                                                        GTGATTAGCGGTTGAGTTGAGTTGAGTGTACGAACGTTGTTAATGTGCAGGGAAGATGATTAATT       ]




>consensus_15286#1
TCGCTAGACAAGTCCCCCCCCCCGCGGGAGCAAACGCTCCCCGATTGGGGGTTCCCCCTC
CTCCCCCCCAAGGGCAAGGTCATGTCCATTGTGGACCCCCGCTTTTCCGCCGCCGCCGCC
GCCGCCGGGGCAGGGGGCGAGCTCCCGGCGAGGGCGGTGCCCAAGGCGGCGATGTTGGGG
TACCACTGCTTGAACCGGAACCCCAAGGGGAGGCCGTTCATGCGGGACATTGTCGGGTCG
CTCGAGCCGCTGCAGGCCGACGACGAGGGGCGCGACCCCCCCGGGGCCTGAAAAAAAGGG
AAAGGGACCCAAATGTTGTTGGGATTAATTAATTAAAGCTGTATCATAATGAAAATCAAA
AGATTTGGTAGTGCACCAAGGGGGTAGGTGTAGTGATTAGCGGTTGAGTTGAGCTGAGTG
TACGAACGTTGTTAATGTGCAGGGAAGATGATTAATTAATTAAT

consensusID : consensus_15286#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 305
fasta sequence

                              [TGAATATCATCAGAGCTTGTTCAGACTGTGTCCCTATTCTTGCTCAGCTTCTAATCCAGGGATACACAGAGATATCGCCCTTTTTTGGCAGTGATTATCTCTCTCTCTAGCTTGGTTGAGAGAGAAGAACAGCAGCTCTTGCTTGCCTCCTTACTTTCTTCTTGGTGTTCTTGGAGAGAGAGGGAGAGGATTAGAGGTTGTGATAGATGGGTAATCGCTGACATATTCTGCGCCTTTTCTCTTTCTATTCATTTCTTTATTTCACTTCCCATCTTTTCTTTCTCTTCTCTAATTCTGCAATCGCA]

[+] EMBL BE040581             [TGAATATCATCAGAGCTTGTTCAGACTGTGTCCCTATTCTTGCTCAGCTTCTAATCCAGGGATACACAGAGATATCGCCCTTTTTTGGCAGTGATTATCTCTCTCTCTAGCTTGGTTGAGAGAGAAGAACAGCAGCTCTTGCTTGCCTCCTTACTTTCTTCTTGGTGTTCTTGGAGAGAGAGGGAGAGGATTAGAGGTTGTGATAGATGGGTAATCGCTGACATATTCTGCGCCTTTTCTCTTTCTATTCATTTCTTTATTTCACTTCCCATCTTTTCTTTCTCTTCTCTAATTCTGCAATCGCA]




>consensus_15286#2
TGAATATCATCAGAGCTTGTTCAGACTGTGTCCCTATTCTTGCTCAGCTTCTAATCCAGG
GATACACAGAGATATCGCCCTTTTTTGGCAGTGATTATCTCTCTCTCTAGCTTGGTTGAG
AGAGAAGAACAGCAGCTCTTGCTTGCCTCCTTACTTTCTTCTTGGTGTTCTTGGAGAGAG
AGGGAGAGGATTAGAGGTTGTGATAGATGGGTAATCGCTGACATATTCTGCGCCTTTTCT
CTTTCTATTCATTTCTTTATTTCACTTCCCATCTTTTCTTTCTCTTCTCTAATTCTGCAA
TCGCA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_15286#0      CTGCGGCTGCTGTTGCACAAGTAGCATCACCAACCTCTCCCTGTCTATCCCATATTATTC 60
consensus_15286#1      ------------------------------------------------------------
consensus_15286#2      ------------------------------------------------------------
                                                                                   

consensus_15286#0      GTCTCCTTGCTTGCTTCTCTGAATATCATCAGAGCTTGTTCAGACTGTGTCCCTGTTCTT 120
consensus_15286#1      ------------------------------------------------------------
consensus_15286#2      ------------------------------------------------------------
                                                                                   

consensus_15286#0      GCTCAGCTTCTAATCCAGGGATACACAGAGATATCGCCCTTTTTTGGCAGTGATTATCTC 180
consensus_15286#1      ------------------------------------------------------------
consensus_15286#2      ------------------------------------------------------------
                                                                                   

consensus_15286#0      TCTCTCTAGCTTGGTTGAGAGAGAAGAACAGCAGCTCTTGCTTGCCTCCTTACTTTCTTC 240
consensus_15286#1      ------------------------------------------------------------
consensus_15286#2      ------------------------------------------------------------
                                                                                   

consensus_15286#0      TTGGTGTTCTTGGAGAGAGAGGGAGAGGATTAGAGGTTGTGATAGATGGGTAATTGCTGG 300
consensus_15286#1      ------------------------------------------------------------
consensus_15286#2      ------------------------------------------------------------
                                                                                   

consensus_15286#0      TTTAGAGGGAGCTTAATTGTTAACAGAGTCTCTTCTAATGCGAAGCCAGAGACTCCCAAG 360
consensus_15286#1      ------------------------------------------------------------
consensus_15286#2      ------------------------------------------------------------
                                                                                   

consensus_15286#0      ATCCAGAGCCCATCGGAGAGGGACCGGAGCGACGAGAGCAAGCTGCCATCGAACGCCAAG 420
consensus_15286#1      ------------------------------------------------------------
consensus_15286#2      ------------------------------------------------------------
                                                                                   

consensus_15286#0      GAGGTGGAGGCGATGCGGTTGGACTCGTCGGCGCGCAACCCGCTCGTCGCCTTCTCCTTC 480
consensus_15286#1      ------------------------------------------------------------
consensus_15286#2      ------------------------------------------------------------
                                                                                   

consensus_15286#0      GAGGAGCTCAGGGCGGTCACCAGCAACTTCCGCCAGGACTCCCTCATCGGCGGCGGCGGC 540
consensus_15286#1      ------------------------------------------------------------
consensus_15286#2      ------------------------------------------------------------
                                                                                   

consensus_15286#0      TTCGGCCGCGTCTACAAGGGCGCCGTCGCCGCCTCCGCCGCCGGCGACGGCGACGGCGCC 600
consensus_15286#1      ------------------------------------------------------------
consensus_15286#2      ------------------------------------------------------------
                                                                                   

consensus_15286#0      GAGCCCCAGCCCGTCGCCGTCAAGGTCCACGACGGCGACAACAGCTTCCAGGGCCACCGC 660
consensus_15286#1      ------------------------------------------------------------
consensus_15286#2      ------------------------------------------------------------
                                                                                   

consensus_15286#0      GAGTGGCTGGCGGAGGTGATCTTCCTGGGCCATCTGTCGCACCCCAACCTGGTGAGGCTC 720
consensus_15286#1      ------------------------------------------------------------
consensus_15286#2      ------------------------------------------------------------
                                                                                   

consensus_15286#0      GTCGGATACTGCTGCGAGGGCGACCACCGGCTGCTCGTCTACGAGTACATGCCACGCGGC 780
consensus_15286#1      ------------------------------------------------------------
consensus_15286#2      ------------------------------------------------------------
                                                                                   

consensus_15286#0      AGCGTCGAGTCCCACCTCTTCTCCCGGGTGATGGCGCCGCTGTCGTGGGCGACGCGGATG 840
consensus_15286#1      ------------------------------------------------------------
consensus_15286#2      ------------------------------------------------------------
                                                                                   

consensus_15286#0      AAGATCGCGCTGGGCGCGGCGAGGGGGCTCGCGTTCCTCCACGAGGCCGAGAAGCCTGTC 900
consensus_15286#1      ------------------------------------------------------------
consensus_15286#2      ------------------------------------------------------------
                                                                                   

consensus_15286#0      ATCTACCGCGACTTCAAGACCTCCAACATCCTCCTCGACGAGGAGTTCAACGCGAAGCTG 960
consensus_15286#1      ------------------------------------------------------------
consensus_15286#2      ------------------------------------------------------------
                                                                                   

consensus_15286#0      TCGGACTTCGGGCTGGCGAAGGACGGGCCGGTGGGGGACAAGTCGCACGTGTCGACGCGG 1020
consensus_15286#1      ------------------------------------------------------------
consensus_15286#2      ------------------------------------------------------------
                                                                                   

consensus_15286#0      ATCATGGGCACCTACGGCTACGCGGCGCCGGAGTACGTCATGACCGGCCACCTCACGGCC 1080
consensus_15286#1      ------------------------------------------------------------
consensus_15286#2      ------------------------------------------------------------
                                                                                   

consensus_15286#0      ATGAGCGACGTCTACAGCTACGGCGTCGTCCTCCTCGAGCTCCTCACCGGCCGCAAGTCG 1140
consensus_15286#1      ---------------------------------------------------------TCG 3
consensus_15286#2      ------------------------------------------------------------
                                                                                   

consensus_15286#0      CTCGACAAGTCCCGCCCCCCGCGGGAGCAGACGCTCGCCGACTGGGCGCTCCCCCTCCTC 1200
consensus_15286#1      CTAGACAAGTCCCCCCCCCCGCGGGAGCAAACGCTCCCCGATTGGGGGTTCCCCCTCCTC 63
consensus_15286#2      ------------------------------------------------------------
                                                                                   

consensus_15286#0      ACCCACAAGCGCA--AGGTCATGTCCATCGTCGACCCCCGCCTCTCCGCCGCCGCCGCCG 1258
consensus_15286#1      CCCCCCAAGGGCA--AGGTCATGTCCATTGTGGACCCCCGCTTTTCCGCCGCCGCCGCCG 121
consensus_15286#2      ----TGAATATCATCAGAGCTTGTTCAGACTGTGTCCCTATTCTTGCTCAGCTTCTAAT- 55
                             **   **  **  * *** **   *    ***      * * * **  *     

consensus_15286#0      CCGCCGGCGCAGGCGGCGAGCTGCCGGCGAGGGCGGTGCACAAGGCGGCGATGCTGGCGT 1318
consensus_15286#1      CCGCCGGGGCAGGGGGCGAGCTCCCGGCGAGGGCGGTGCCCAAGGCGGCGATGTTGGGGT 181
consensus_15286#2      CCAGGGATACACAGAGATATCGCCCT------------TTTTTGGCAGTGATTATCTCTC 103
                       **   *   **    *  * *  **                  *** * ***  *     

consensus_15286#0      ACCACTGCCTGAACCGGAACCCCAAGGCGAGGCCGCTCATGCGGGACATCGTCGCGTCGC 1378
consensus_15286#1      ACCACTGCTTGAACCGGAACCCCAAGGGGAGGCCGTTCATGCGGGACATTGTCGGGTCGC 241
consensus_15286#2      TCTCTAGCTTGGTTGAGAG---AGAAGAACAGCAGCTCTTGCTTG-CCTCCTTACTTTCT 159
                        *    ** **     **      * *    ** * ** ***  * * *  *    *   

consensus_15286#0      TCGAGCCGCTGCAGGCCGACGACGAGGCGCGCGACGCCGCCGGCGCCTGAGAAGAAGGGA 1438
consensus_15286#1      TCGAGCCGCTGCAGGCCGACGACGAGGGGCGCGACCCCCCCGGGGCCTGAAAAAAAGGGA 301
consensus_15286#2      TCTTGGTGTTCTTGG---AGAGAGAGGGAGAGGA-----TTAGAGGTTGTGATAGATGGG 211
                       **  *  * *   **   *    ****     **        * *  **  *   * ** 

consensus_15286#0      GAGGGACGCAGATGTTGTTGGGATTAATTAATTAAAGCTGTATCATAATGAAAATCAAAA 1498
consensus_15286#1      AAGGGACCCAAATGTTGTTGGGATTAATTAATTAAAGCTGTATCATAATGAAAATCAAAA 361
consensus_15286#2      TAATCGCTGACATATTCTGCGCCTTTTCTCTTTCTATTCATTTCTTTATTTCACTTCCCA 271
                        *    *  * ** ** *  *  **   *  **  *    * ** * **   * *    *

consensus_15286#0      GATTTGGTAGTGCAGCAAGGGGGTAGGTGTAGTGATTAGCGGTTGAGTTGAGCTGAGTGT 1558
consensus_15286#1      GATTTGGTAGTGCACCAAGGGGGTAGGTGTAGTGATTAGCGGTTGAGTTGAGCTGAGTGT 421
consensus_15286#2      TCTTTTCTTTCTCTTCTCTAATTCTGCAATCGCA-------------------------- 305
                         ***  *    *  *         *   * *                            

consensus_15286#0      ACGAACGTTGTTAATGTGCAGGGAAGATGATTAATTAATTAATTAATTACTTAAAAATCT 1618
consensus_15286#1      ACGAACGTTGTTAATGTGCAGGGAAGATGATTAATTAATTAAT----------------- 464
consensus_15286#2      ------------------------------------------------------------
                                                                                   

consensus_15286#0      GAAAAAAAAAAAAAAAA 1635
consensus_15286#1      -----------------
consensus_15286#2      -----------------