cluster # 1605

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Oryza sativa
cluster # 1605 cluster # 1605 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_1605#0 length = 687 sequences # 2

consensusID : consensus_1605#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 687
fasta sequence

                              [AAAGTCCCTTGAAGAGTTATCACATCCAGAATGCCCAGTCCCTGAATCCTCTCAGAACCTCTCTCCTACAGTCTCATTGGCTCCCCTTGAGATAATTGGTAATACTCCTCCCATTCTTGAACAAGTAGAATTACCTCTTGCACAGCGTAGAGAGACTAGATCCAATGCTGGTAGACCTCCTATACGTCTTGGTTTTGAGCATCTTAGTTCTATGCATGACATTGCAAACTATATCTTATATTCTCATGTTTCACTGGCATACAAAACATTCATTGCATCATTATAGACAGTGCCCATACCAAAGGATTGGAAGTGTGCAAAACAAGATCCAAGGTGGAAAGATGCAATGAGAGAAGAGTTGAATGCCCTTATGAAGAATAAGACTTGGGAGCTTGTAAAACTTCCACCAGGAAAAAAGGCAGTGGGATGTAAGTGGGTTTTTACAGTGAAGCAAACTCCTGAAGGGAAGGTGGATAGGTATAAAGCAAGATTAGTCGCAAAAGGCTACAGTCAAACATATGGAATTGACTATGATGAGACATTTGCACCGGTGGCAAAAATGGGTACAGTGAGAACTTTAGTATCTTGTGCAGTGA-ACTTTGGGTGGCCCCTCCATCAGCTTGATGTGAAAAATGCATTTCTTCATGGTGATTTATATGAGGAGGTCTACATGGAGATTCCTCCAGG]

[+] EMBL CB680524             [AAAGTCCCTTGAAGAGTTATCACATCCAGAATGCCCAGTCCCTGAATCCTCTCAGAACCTCTCTCCTACAGTCTCATTGGCTCCCCTTGAGATAATTGGTAATACTCCTCCCATTCTTGAACAAGTAGAATTACCTCTTGCACAGCGTAGAGAGACTAGATCCAATGCTGGTAGACCTCCTATACGTCTTGGTTTTGAGCATCTTAGTTCTATGCATGACATTGCAAACTATATCTTATATTCTCATGTTTCACTGGCATACAAAACATTCATTGCATCATTATAGACAGTGCCCATACCAAAGGATTGGAAGTGTGCAAAACAAGATCCAAGGTGGAAAGATGCAATGAGAGAAGAGTTGAATGCCCTTATGAAGAATAAGACTTGGGAGCTTGTAAAACTTCCACCAGGAAAAAAGGCAGTGGGATGTAAGTGGGTTTTTACAGTGAAGCAAACTCCTGAAGGGAAGGTGGATAGGTATAAAGCAAGATTAGTCGCAAAAGGCTACAGTCAAACATATGGAATTGACTATGATGAGACATTTGCACCGGTGGCAAAAATGGGTACAGTGAGAACTTTAGTATCTTGTGCAGTGA ACTTTGGGTGGCCCCTCCATCAGCTTGATGTGAAAAATGCATTTCTTCATGGTGATTTATATGAGGAGGTCTACATGGAGATTCCTCCAGG]
[+] EMBL CF328398             [                                                                                                                                                                                                                                                                                     acggcATTGACAGTGCCCATACCAAAGGATTGGAAGTGTGCAAAACAAGATCC AGGTGGAAAGATGCAATGAGAGAAGAGTTGAATGCCCTTATGAAGAATAAGACTTGGGAGCTTGTAAAACTTCCACCAGGAAAAAAGGCAGTGGGATGTAAGTGGGTTTTTACAGTGAAGCAAACTCCTGAAGGGAAGGTGGATAGGTATAAAGCAAGATTAGTCGCAAAAGGCTACAGTCAAACATATGGAATTGACTATGATGAGACATTTGCACCGGTGGCAAAAATGGGTACAGTGAGAACTTTAGTATCTTGTGCAGTGANACTTTGGGTGGCCCCTCCATCAGCTTGATGTGAAAAATGCATTTCTTCATGGT                                      ]




>consensus_1605#0
AAAGTCCCTTGAAGAGTTATCACATCCAGAATGCCCAGTCCCTGAATCCTCTCAGAACCT
CTCTCCTACAGTCTCATTGGCTCCCCTTGAGATAATTGGTAATACTCCTCCCATTCTTGA
ACAAGTAGAATTACCTCTTGCACAGCGTAGAGAGACTAGATCCAATGCTGGTAGACCTCC
TATACGTCTTGGTTTTGAGCATCTTAGTTCTATGCATGACATTGCAAACTATATCTTATA
TTCTCATGTTTCACTGGCATACAAAACATTCATTGCATCATTATAGACAGTGCCCATACC
AAAGGATTGGAAGTGTGCAAAACAAGATCCAAGGTGGAAAGATGCAATGAGAGAAGAGTT
GAATGCCCTTATGAAGAATAAGACTTGGGAGCTTGTAAAACTTCCACCAGGAAAAAAGGC
AGTGGGATGTAAGTGGGTTTTTACAGTGAAGCAAACTCCTGAAGGGAAGGTGGATAGGTA
TAAAGCAAGATTAGTCGCAAAAGGCTACAGTCAAACATATGGAATTGACTATGATGAGAC
ATTTGCACCGGTGGCAAAAATGGGTACAGTGAGAACTTTAGTATCTTGTGCAGTGAACTT
TGGGTGGCCCCTCCATCAGCTTGATGTGAAAAATGCATTTCTTCATGGTGATTTATATGA
GGAGGTCTACATGGAGATTCCTCCAGG

clustalw multiple alignements is not computed in this case