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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_16062#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 27 consensus length = 710 fasta sequence
[CAAAAGCTATACAATTAATTAATCATCACT-CGCGTTTTAACCATGGCCCCCTCCAAGCTCTCCATAGCGTCGTTCTTCCTCGCCACGGCTCTTCTCCTGCTGGCTTTCGCCAGCGGCCAGACCACCAATGCCCCACCCCCACCACCGCCTCCGAACACGCAGTCCCCCGGAGGAGTCATATCAGATCTCGCGAACTACACGAGGTGCATCACTGCGATATTGTTCGGACGCCCCAATCCCGAGCAGTTCTGCTGCCCGGCGATCTCGGAG-----CTCCCCAAC-AACGTCGCCGCCAGATGCGTGTGCGCCGC-TCT-CAGGGCCA-CC-GGAC-TATCAATC-GGTATAACCGC-GAG-C-AATAA-TGTCACAGGTA-GCATCC-TC-AAGATC-TGC-AACAAAGCTCCCC-T-GG-ACCT-CTTGAC-TGTCAACTGC-AGCAGAGCCTAGCTGATCGCGATC-TGGCTCTAGCTAATAAAGCATGCATGCACTACGCGCGTACTCTACCCT-TAAATCGTAATT-ATATATTGTGCTGCTTGCGTAATTACTT-ATATATGTTACTCGTATGT-ACTTAATTTGGGTCCTGT-GCAGCTATGCTTCTAGTCGACTATACC-AGT-GTACTGCATGCATGCTTCTGTGTGCTAGCTTGGTGATTGATCGACTAGCTAGTTGTCCGTCTT-A-CAATATATCGTTGAATAAAAGTTGATGTTAAAAATCGTGA---AAAAAAAAAA]
[+] EMBL AK121385 [CAAAAGCTATACAATTAATTAATCATCACT CGCGTTTTAACCATGGCCCCCTCCAAGCTCTCCATAGCGTCGTTCTTCCTCGCCACGGCTCTTCTCCTGCTGGCTTTCGCCAGCGGCCAGACCACCAATGCCCCACCCCCACCACCGCCTCCGAACACGCAGTGCCCCGGAGGAGTCATATCAGATCTCGCGAACTACACGAGGTGCATCACTGCGATATTGTTCGGACGCCCCAATCCCGAGCAGTTCTGCTGCCCGGCGATCTCGGAG CTCCCCAAC AACGTCGCCGCCAGATGCGTGTGCGCCGC TCT CAGGGCCA CC GGAC TATCAATC GGTATAACCGC GAG C AATAA TGTCACAGGTA GCATCC TC AAGATC TGC AACAAAGCTCCCC T GG ACCT CTTGAC TGTCAACTGC AGCAGAGCCTAGCTGATCGCGATC TGGCTCTAGCTAATAAAGCATGCATGCACTACGCGCGTACTCTACCCT TAAATCGTAATT ATATATTGTGCTGCTTGCGTAATTACTT ATATATGTTACTCGTATGT ACTTAATTTGGGTCCTGT GCAGCTATGCTTCTAGTCGACTATACC AGT GTACTGCATGCATGCTTCTGTGTGCTAGCTTGGTGATTGATCGACTAGCTAGTTGTCCGTCTT A CAATATATCGTTGAATAAAAGTTGA ]
[+] EMBL AU101256 [ AGTTATCCAATTAATTAATCATCACTNGGCGTTTAACCCATGGCCCCTTCCAAG TTTCCANAGCGTCGTTTTCCCTCGCCACGG TCTTCTCCTGCTGGCTTTCGCCAGCGGCCAGACCACCAATGCCCCACCCCCACCACCGCCTCCGAACACGCAGTGCCCCGGAGGAGTCATATCAGATCTCGCGAACTACACGAGGTGCATCACTGCGATATTGTTCGGACGCCCCAATCCCGAGCAGTTCTGCTGCCCGGCGATCTCGGAG CTCCCCAAC AACGTCGCCGCCAGATGCGTGTGCGCCGC TCT CAGGGCCA CC GGAC TATCAATC GGTATAACCGC GAG C AATAA TGTCACAGGTA GCATCC TC AAGATC TGC AACAAAGCTCCCC T GG ACCT CTTGAC TGTCAACTGC AGCAGAGCCTAGCTGATCGCGATC TGGCTCTAGCTAATAAAGCATGCATGCACTACGCGCGTACTCTACCCT TAAATCGTAATT ATATATTGTGCTGCTTGCGTAATTACTT ATATATGTTACTCGTATGT ACTTAATTTGGGTCCTGT GCAGCTATGCTTCTAGTCGACTATACC AGT GTACTGCATGCATGCTTCTGTGTGCTAGCTTGGTGATTGATCGACTAGCTAGTTGTCCGTCTT A CAATATATCGTTGAATAAAAGTTGATGTTAAAAA ]
[+] EMBL AU064888 [ ATTAATTAATCATCACT CGCGTTTTAACCATGGCCCCCTCCAAGCTCTCCATAGCGTCGTTCTTCCTCGCCACGGCTCTTCTCCTGCTGGCTTTCGCCAGCGGCCAGACCACCAATGCCCCACCCCCACCACCGCCTCCGAACACGCAGNCNCCCGGAGGAGTCATATCAGATCTCGCGAACTACACGAGGTGCATCACTGCGATATTGTTCGGACGNCCCAATCCCGAGCAGTTCTGCTGCCCGGCGATCTCGGAG CTCCCCAAC AACGTCGNCGCCAGATGCGTGT ]
[+] EMBL AU064628 [ ATTAATTAATCATCACT CGCGTTTTAACCATGGCCCCCTCCAAGCTCTCCATAGCGTCGTTCTTCCTCGCCACGGCTCTTCTCCTGCTGGCTTTCGCCAGCGGCCAGACCACCAATGCCCCACCCCCACCACCGCCTCCGAACACGCAGNCTCCCGGAGGAGTCATATCAGATCTCGCGAACTACACGAGGTGCATCACTGCGATATTGTTCGGACGCCCCAATCCCGAGCAGTTCTGCTGCCCGGCGATCTCGGAG CTCCCCAAC AACGTCGCCGCCAGATGCGTGTGCGCCGC TCT CAGGGCCA CC GGAC TATCAATC GGTATAACCGC GAG C AATAA TGTCACAGGTA GCATCC TC AAGATC ]
[+] EMBL AU064968 [ ATTAATTAATCATCACT CGCGTTTTAACCATGGCCCCCTCCAAGCTCTCCATAGCGTCGTTCTTCCTCGCCACGGCTCTTCTCCTGCTGGCTTTCGCCAGCGGCCAGACCACCAATGCCCCACCCCCACCACCGCCTCCGAACACGCAG NCCCCGGAGGAGTCATATCAGATCTCGCGAACTACACGAGGTGCATCACTGCGATATTGTTCGGACGCCCCAATCCCGAGCAGTTCTGCTGCCCGGCGATCTCGGAG CTCCCCAAC AACGTCGCCGCCAGATGCGTGTGCGCCGC TCT CAGGGCCA CC GGAC TATCANTC GGTATAACCGC GAG C AATAA TGTCACAGGTA GCATCC TC AAGATC TGC AACAAAGCTTCCC T GG NCCT CTTGAC TGTCAACTNC AGCAGAG CTAGCTGATCGNGATC TTGCTCTAG TAATAA ]
[+] EMBL AU065064 [ ATTAATTAATCATCACT CGCGTTTTAACCATGGCCCCCTCCAAGCTCTCCATAGCGTCGTTCTTCCTCGCCACGGCTCTTCTCCTGCTGGCTTTCGCCAGCGGCCAGACCACCAATGCCCCACCCCCACCACCGCCTCCGAACACGCAG NCCCCGGAGGAGTCATATCAGATCTCGCGAACTACACGAGGTGCATCACTGCGATATTGTTCGGACGCCCCAATCCCGAGCAGTTCTGCTGCCCGGCGATCTCGGAG CTCCCCAAC AACGTCGCCGCCAGATGCGTGTGCGCCGC TCT CAGGGCCA CC GGAC TATCAATC GGTATAACCGC GAG C AATAA TGTCACAGGTA GCATNC TC AAGATCTTGC AACAAAGCTTCCC TGGG ACCT CTTGACTTGTCAACTGC AGCAGAGCCTAGCTGATCG ]
[+] EMBL C98999 [ nTTAATTAATCATCACT CGCNTTTTAACCATGGCCCCCTCCAAGCTCTCCATAGCGTCGTTNTTCCTCGCCACGGCTCTTCTCCTNCTGGCTTTCGCCAGCGGCCAGACCACCAATGCCCCACCCCCACCACCGNCTCCGAACACGCAGT CCCCGGAGGAGTCATATCAGATCTCGCGAACTACACGAGGTGCATCACTGCGATATTGTTCGGACGCCCCAATCCCGAGCAGTTCTGCTGCCCGGCGATCTCGGAG CTCCCCAAC AACGTCGCCGCCAGATGCGTGTGCGCCGCTTCT CAGGGCCA CC GGAC TATCAATCGGGTATAACCGC GAG CAAATAA TGTCACAGGTA GCATt ]
[+] EMBL AU064667 [ AATCATCACT CGCGTTTTAACCATGGCCCCCTCCAAGCTCTCCATAGCGTCGTTCTTCCTCGCCACGGCTCTTCTCCTGCTGGCTTTCGCCA NGGCCAGACCACCAATGCCCCACCCCCACCACCGCCTCCGAACACGCAG NCCCCGGAGGAGTCATATCAGATCTCGCGAACTACACGAGGTGCATCACTGCGATATTGTTCGGACGNCCCAATCCCGAGCAGTTCTGCTGCCCGGCGATCTCGGAG CTCCCCAAC AACGTCGCCGCCAGATGCGTGTGCGCCGC TCT CAGGGCCA CC GGAC TATCAATC GGTATAACCGC GAG C AATAA TGTCACAGGTA GCATCC TC AAGATC TGC AACAAAG TTCCC T GG ACCT CTTGAC TGT NACTNC AGCAGAG CTAGCTGATCG GATC TGG TTTAG TAATAAAG ATG ATG ACTA ]
[+] EMBL AU065003 [ AATCATCACT CGCGTTTTAACCATGGCCCCCTCCAAGCTCTCCATAGCGTCGTTCTTCCTCGCCACGGCTCTTCTCCTGCTGGCTTTCGCCAGCGGCCAGACCACCAATGCCCCACCCCCACCACCGCCTCCGAACACGCAGT CCCCGGAGGAGTCATATCAGATCTCGCGAACTACACGAGGTGCATCACTGCGATATTGTTCGGACGCCCCAATCCCGAGCAGTTCTGCTGCCCGGCGATCTCGGAG CTCCCCAAC AACGTCGCCGCCAGATGCGTGTGCGCCGC TCT CAGGGCCA CC GGACTTATCAATC GGTATAACCGC GAG C AATAA TGTCACAGGTA GCATNC TC AAGATCTTGC AACA ]
[+] EMBL AU064095 [ AATCATCACT CGCNTTTTAACCATGGCCCCCTCCAAGCTCTCCATAGCGTCGTTNTTCCTCGCCACGGCTCTTCTCCTGCTGGCTTTCGCCA CGGCCAGACCACCAATGCCCCACCCCCACCACCGCCTCCNAACACGCAG NCCCCGGAGGAGTCATATCANATCTCGCGAACTACACGAGGTGCATCACTGCGATATTGTTCGGACGCCCCAATCCCGAGCAGTTCTGCTGCCCGGCGATCTCGGAG CTCCCCAAC AACGTCGCCGCCAGATGCGTGTGCGCCGC TCT CAGGGCCA CC GGAC TATCAATC GGTATAACCGC GAG N AATAA TGTCACAGGTA GCATCC TC AAGATC TGC AACAAAGNTTCCC T GG ACCT CTTGAC TGTNAACTTC AGCAGAGGCTAG TTATCGgaa ]
[+] EMBL AU064803 [ CACT CGCGTTTTAACCATGGCCCCCTCCAAGCTCTCCATAGCGTCGTTCTTCCTCGCCACGGCTCTTCTCCTGCTGGCTTTCGCCAGCGGCCAGACCACCAATGCCCCACCCCCACCACCGCCTCCGAACACGCAGTCCCCCGGAGGAGTCATATCAGATCTCGCGAACTACACGAGGTGCATCACTGCGATATTGTTCGGACGCCCCAATCCCGAGCAGTTCTGCTGCCCGGCGATCTCGGAG CTCCCCAAC AACGTCGCCGCCAGATGCGTGTGCGCCGC TCT CAGGGCCA NC GGAC TATCAATC GGTATAACCGC GAG C AATAA TGTCACAGGTA GCATCC TC AAGATC TGC AACAAAGCTTCCC TNGG ACCT TTTGAC TTTCAACTNC AGCAGAG CTAGCTGATCG GGTC TTGCTNT GGTAATAAAGa ]
[+] EMBL AU172931 [ CACT CGCGTTTTAACCATGGCCCCCTCCAAGCTCTCCATAGCGTCGTTCTTCCTCGCCACGGCTCTTCTCCTGCTGGCTTTCGCCAGCGGCCAGACCACCAATGCCCCACCCCCACCACCGCCTCCGAACACGCAGTGCCCCGGAGGAGTCATATCAGATCTCGCGAACTACACGAGGTGCATCACTGCGATATTGTTCGGACGCCCCAATCCCGAGCAGTTCTGCTGCCCGGCGATCTCGGAG CTCCCCAAC AACGTCGCCGCCAGATGCGTGTGCGCCGC TCT CAGGGCCA CC GGAC TATCAATC GGTATAACCGC GAG C AATAA TGTCACAGGTA GCATCC TC AAGATC TGC AACAAAGCTCCCC T GG ACCT CTTGAC TGTCAACTGC AGCAGAGCCTAGCTGATCGCGATC TGGCTCTAGCTAA ]
[+] EMBL AU064100 [ CACT CGCNTTTTAACCATGGCCCCCTCCAAGCTCTCCATAGCGTCGTTNTTCCTCGCCACGGCTCTTCTCCTGCTGGCTTTCGCCA CGGCCAGACCACCAATGCCCCACCCCCACCACCGCCTCCGAACACGCAGNCCCCCGGAGGAGTCATATCANATCTCGCGAACTACACGAGGTGCATCACTGCGATATTGTTCGGACGNCCCAATCCCGAGCAGTTCTGCTGCCCGGCGATCTCGGAG CTCCCCAAC AACGTCGCCGCCAGATGCGTGTGCGCCGC TCT CAGGGNCA CCGGGAC TATCAATC GGTATAACCGCGGGG A AATAA TGTCACAGGTA GCATCCTTA AAGATC TTG AACAAAGGTCCCC T GGNCCCT TTTGACTTGTCA ]
[+] EMBL AU064815 [ CACT CGCGTTTTAACCATGGCCCCCTCCAAGCTCTCCATAGCGTCGTTCTTCCTCGCCACGGCTCTTCTCCTGCTGGCTTTCGCCAGCGGCCAGACCACCAATGCCCCACCCCCACCACCGCCTCCGAACACGCAGTCCCCCGGAGGAGTCATATCAGATCTCGCGAACTACACGAGGTGCATCACTGCGATATTGTTCGGACGGCCCAATCCCGAGCAGTTCTGCTGCCCGGCGATCTCGGAG CTTCCCAAC AACGTCGCCGNCAGATGCGTGTGCGCCGN TCTNAAGGGCCA CC GGAC TATCAATC GGTATAACCGCGGAG C AATAATTGTCACAGGTAGGAATCC TCAAAGATC TTC AACAAAGGTTCCC TNGG ACCT ]
[+] EMBL C74588 [ AACCATGGCCCCCTCCAAGCTCTCCATAGCGTCGTTCTTCCTCGCCACGGCTCTTCTCCTGCTGGCTTTCGCCA CGGCCAGACCACCAATGCCCCACCCCCACCACCNCCTCCGAACACGCAGNCCCCCGGAGGAGTCATATCAGATCTCGCGAACTACACGAGGTGCATCACTGCGATATTGTTCGGACGNCCCAATCCCGAGCAGTTCTGCTGCCCGGCGATCTCGGAG CTTCCCAAC AACGTCGNCGNCAGATGCGTGTGCGCCGC TCT CAGGGNCA CC GGAC TATCAATC GGTATAACCGC GAG CAAATAA TGTCACAGGTA GCATCC TCAAAGATC TGC AACAAAGTTCCCCTT GG ACCTNTTTGAC TGTCAACTGCAAGAAGAGCCTAGCTtg ]
[+] EMBL C73392 [ ACCATGGCCCCCTCCAAGCTCTCCATAGCGTCGTTNTTCCTCGCCACGGCTCTTCTCCTGCTGGCTTTCGCCAGCGGCCAGACCACCAATGCCCCACCCCCACCACCGCCTCCGAACACGCAGTCNCCCGGAGGAGTCATATCAGATCTNGCGAACTACACGAGGTGCATCACTGCGATATTGTTCGGACGCCCCAATCCCGAGCAGTTCTGCTGCCCGGCGATCTCGGAG CTCCCCAAC AACGTCGCCGCCAGATGCGTGTGCGCCGC TCT CAGGGCCA CC GGAC TATCAATC GGTATAACCGCGGAG C AATAA TGTCACAGGTA GCATCC TC AAGATC TTC AACAAAGGTNCCC TGGG ACCT NTTGAC TGTCAACTTG AGCAGAGCCTAGCTGATCGGGATCTTGGTTCTAGtt ]
[+] EMBL OSC853 [ CAAGCTCTCCATAGCGTCGTTCTTCCTCGCCACGGCTCTTCTCCTGCTGGCTTTCG CA GGCCAGACCACCAATGCCCCACCCCCACCACCGCCTCCGAACACGCAGT CCCCGGA GAGTCATATCAGATCTCGCGAACTACACGAGGTGCATCACTGCGATATTGTTCGGACGCCCCAATCCCGAGCAGTTCTGCTGCCCGGCGATCTCGGAG CTCCCCAAC AACGTCGCCGCCAGATGCGTGTGCGCCGC TCT CAGGGCCA CC GGAC TATCAATC GGTATAACCGC GAG C AATAA TGTCACAGGTA GCATCC TC AAGATC TGC AACAAAGCTTCCC TGGG ANCT CTTGAC TGTCAACTGC AGCAGAG CTAGCTGATCGCGATC TTGCTCTAGCTAATAAAGCATGCATGCACTACGGGNGTACTTTACCC TNAATCGTAAT ]
[+] EMBL AU165681 [ CACCCCCACCACGGCCTCCGAACACGCAGTGCCCCGNAGGAGTCATATCAGATCTCGCGAACTACACGAGGTGCATCACTGCGATATTGTTCGGACGCCCCAATCCCGAGCAGTTCTGCTGCCCGGCGATCTCGGAG CTCCCCAAC AACGTCGCCGCCAGATGCGTGTGCGCCGC TCT CAGGGCCA CC GGAC TATCAATC GGTATAACCGC GAG C AATAA TGTCACAGGTA GCATCC TC AAGATC TGC AACAAAGCTCCCC T GG ACCT CTTGAC TGTCAACTGC AGCAGAGCCTAGCTGATCGCGATC TGGCTCTAGCTAATAAAGCATGCATGCACTACGCGCGTACTCTACCCT TAAATCGTAATT ATATATTGTGCTGCTTGCGTAATTACTT ATATATGTTACTCGTATGT ACTTAATTTGGGTCCTGT GCAGCTATGCTTCTAGTCGACTATACC AGT GTACTGCATGCATGCTTCTGTGTGCTAGCTTGGTGATTGATCGACTAGCTAGTTGTCCGTCTT A CAATATATCGTTGAATAAAAGTTGATGTTAAAAAa ]
[+] EMBL AU163820 [ CCTCCGAACACGCAGTGCCCCGNAGGAGTCATATCAGATCTCGCGAACTACACGAGGTGCATCACTGCGATATTGTTCGGACGCCCCAATCCCGAGCAGTTCTGCTGCCCGGCGATCTCGGAG CTCCCCAAC AACGTCGCCGCCAGATGCGTGTGCGCCGC TCT CAGGGCCA CC GGAC TATCAATC GGTATAACCGC GAG C AATAA TGTCACAGGTA GCATCC TC AAGATC TGC AACAAAGCTCCCC T GG ACCT CTTGAC TGTCAACTGC AGCAGAGCCTAGCTGATCGCGATC TGGCTCTAGCTAATAAAGCATGCATGCACTACGCGCGTACTCTACCCT TAAATCGTAATT ATATATTGTGCTGCTTGCGTAATTACTT ATATATGTTACTCGTATGT ACTTAATTTGGGTCCTGT GCAGCTATGCTTCTAGTCGACTATACC AGT GTACTGCATGCATGCTTCTGTGTGCTAGCTTGGTGATTGATCGACTAGCTAGTTGTCCGTCTT A CAATATATCGTTGAATAAAAGTTGATGTT AAATC TAA AAAA ]
[+] EMBL AU094270 [ ACACGCAGTGCCCCGGAGGAGTCATATCAGATCTCGCGAACTACACGAGGTGCATCACTGCGATATTGTTCGGACGCCCCAATCCCGAGCAGTTCTGCTGCCCGGCGATCTCGGAG CTCCCCAAC AACGTCGCCGCCAGATGCGTGTGCGCCGC TCT CAGGGCCA CC GGAC TATCAATC GGTATAACCGC GAG C AATAA TGTCACAGGTA GCATCC TC AAGATC TGC AACAAAGCTCCCC T GG ACCT CTTGAC TGTCAACTGC AGCAGAGCCTAGCTGATCGCGATC TGGCTCTAGCTAATAAAGCATGCATGCACTACGCGCGTACTCTACCCT TAAATCGTAATT ATATATTGTGCTGCTTGCGTAATTACTT ATATATGTTACTCGTATGT ACTTAATTTGGGTCCTGT GCAGCTATGCTTCTAGTCGACTATACC AGT GTACTGCATGCATGCTTCTGTGTGCTAGCTTGGTGATTGATCGACTAGCTAGTTGTCCGTCTT A CAATATATCGTTGAATAAAAGTTGATGTTAAATCTCGTGA AAAAA ]
[+] EMBL AU094921 [ ATCAGATCTCGCGAACTACACGAGGTGCATCACTGCGATATTGTTCGGACGCCCCAATCCCGAGCAGTTCTGCTGCCCGGCGATCTCGGAGNTTCCCCCCCCAAC AACGTCGCCGCCAGATGCGTGTGCGCCGN TCT CAGGGCCA CC GGAC TATCAATC GGTATAACCGC GAG C AATAA TGTCACAGGTA GCATCC TC AAGATC TGC AACAAAGCTCCCC T GG ACCT CTTGAC TGTCAACTGC AGCAGAGCCTAGCTGATCGCGATC TGGCTCTAGCTAATAAAGCATGCATGCACTACGCGCGTACTCTACCCT TAAATCGTAATT ATATATTGTGCTGCTTGCGTAATTACTT ATATATGTTACTCGTATGT ACTTAATTTGGGTCCTGT GCAGCTATGCTTCTAGTCGACTATACC AGT GTACTGCATGCATGCTTCTGTGTGCTAGCTTGGTGATTGATCGACTAGCTAGTTGTCCGTCTT A CAATATATCGTTGAATAAAAGTTGATGTTAAATCTCGTGA AAAAA ]
[+] EMBL BI799829 [ TCCCGAGCAGTTCTGCTGCCCGGCGATCTCGGAG CTCCCCTACTAACGTCGCCGCCAGATGCGTGTGCGCCGC TTT CAGGGCCACCC GGAC TATCAATC GGTATAACCGC GAGCC AATAA TGTCACAGGTA GCATCC TC AAGATC TGC AACCAAGCTCCCC T GG ACCT CTTGAC TGTCAACTGC AGCAGAGCCTAGCTGATCGCGATC TGGCTCTAGCTAATAAAGCATGCATGCCCTACGCGCGTACTCTACCCT TAAATCGTAATTGATATATTGTGCTGCTTGCGTAATTACTTGATATATGTTACTCGTATGTGACTTAATTTGGGTCCTGTGGCAGCTATGCTTCTAGTCGACTATACC CGTGGTACTGCATGCATGCTTCTGTGTGCTAGCTTGGTGATTGATCGACTAGCTAGTTGTCCGTCTTCACCAATATATCGTTGAATAAAAGTTGATGTT AAATC TGA AAAAAAAAA ]
[+] EMBL AU183066 [ GAG CTCCCCAAC AACGTCGCCGCCAGATGCGTGTGCGCCGC TCT CAGGGCCA CC GGAC TATCAATC GGTATAACCGC GAG C AATAA TGTCACAGGTA GCATCC TC AAGATC TGC AACAAAGCTCCCC T GG ACCT CTTGAC TGTCAACTGC AGCAGAGCCTAGCTGATCGCGATC TGGCTCTAGCTAATAAAGCATGCATGCACTACGCGCGTACTCTACCCT TAAATCGTAATT ATATATTGTGCTGCTTGCGTAATTACTT ATATATGTTACTCGTATGT ACTTAATTTGGGTCCTGT GCAGCTATGCTTCTAGTCGACTATACC AGT GTACTGCATGCATGCTTCTGTGTGCTAGCTTGGTGATTGATCGACTAGCTAGTTGTCCGTCTT A CAATATATCGTTGAATAAAAGTTGATGTTAAAAA ]
[+] EMBL AU183012 [ AG CTCCCCAAC AACGTCGCCGCCAGATGCGTGTGCGCCGC TCT CAGGGCCA CC GGAC TATCAATC GGTATAACCGC GAG C AATAA TGTCACAGGTA GCATCC TC AAGATC TGC AACAAAGCTCCCC T GG ACCT CTTGAC TGTCAACTGC AGCAGAGCCTAGCTGATCGCGATC TGGCTCTAGCTAATAAAGCATGCATGCACTACGCGCGTACTCTACCCT TAAATCGTAATT ATATATTGTGCTGCTTGCGTAATTACTT ATATATGTTACTCGTATGT ACTTAATTTGGGTCCTGT GCAGCTATGCTTCTAGTCGACTATACC AGT GTACTGCATGCATGCTTCTGTGTGCTAGCTTGGTGATTGATCGACTAGCTAGTTGTCCGTCTT A CAATATATCGTTGAATAAAAGTTGATGTTAAAAA ]
[+] EMBL AU182876 [ G CTCCCCAAC AACGTCGCCGCCAGATGCGTGTGCGCCGC TCT CAGGGCCA CC GGAC TATCAATC GGTATAACCGC GAG C AATAA TGTCACAGGTA GCATCC TC AAGATC TGC AACAAAGCTCCCC T GG ACCT CTTGAC TGTCAACTGC AGCAGAGCCTAGCTGATCGCGATC TGGCTCTAGCTAATAAAGCATGCATGCACTACGCGCGTACTCTACCCT TAAATCGTAATT ATATATTGTGCTGCTTGCGTAATTACTT ATATATGTTACTCGTATGT ACTTAATTTGGGTCCTGT GCAGCTATGCTTCTAGTCGACTATACCAAGT GTACTGCATGCATGCTTCTGTGTGCTAGCTTGGTGATTGATCGACTAGCTAGTTGTCCGTCTT A CAATATATCGTTGAATAAAAGTTGATGTTAAAAAa ]
[+] EMBL AU182891 [ AC AACGTCGCCGCCAGATGCGTGTGCGCCGC TCT CAGGGCCA CC GGAC TATCAATC GGTATAACCGC GAG C AATAA TGTCACAGGTA GCATCC TC AAGATC TGC AACAAAGCTCCCC T GG ACCT CTTGAC TGTCAACTGC AGCAGAGCCTAGCTGATCGCGATC TGGCTCTAGCTAATAAAGCATGCATGCACTACGCGCGTACTCTACCCT TAAATCGTAATT ATATATTGTGCTGCTTGCGTAATTACTT ATATATGTTACTCGTATGT ACTTAATTTGGGTCCTGT GCAGCTATGCTTCTAGTCGACTATACC AGT GTACTGCATGCATGCTTCTGTGTGCTAGCTTGGTGATTGATCGACTAGCTAGTTGTCCGTCTT A CAATATATCGTTGAATAAAAGTTGATGTTAAATCTCGTGA AAAAA ]
[+] EMBL BI796784 [ ATAAGTGTCACAGGTA GCATCC TC AAGATCGTGCAAACAAAGCTCCCC T GG ACCT CTTGACATGTCAACTGC AGCAGAGCCTAGCTGATCGCGATC TGGCTCTAGCTAATAAAGCATGCATGCACTACGCGCGTACTCTACCCTGTAAATCGTAATT ATATATTGTGCTGCTTGCGTAATTACTT ATATATGTTACTCGTATGT ACTTAATTTGGGTCCTGT GCAGCTATGCTTCTAGTCGACTATACC AGT GTACTGCATGCATGCTTCTGTGTGCTAGCTTGGTGATTGATCGACTAGCTAGTTGTCCGTCTT A CAATATATCGTTGAATAAAAGTTGATGTTAAATCTCGTGACTTAAAAAAAAAA]
consensusID : consensus_16062#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 181 fasta sequence
[ACTTATGATGATGGTTACTCGTGATGGTACTTGAATTTGGTGCCTGGTGCAGCTATGGCTTGCTGAGTGCGGACTATACCAGTGTACTGGCATGCATGCTTCTGTGTGCTACTTGGTGATTGATCGACTAGCTAGTTGTCCGTCTTACAATATATCGTTGAATAAAAGTTGATGTTAAATC]
[+] EMBL BI797936 [ACTTATGATGATGGTTACTCGTGATGGTACTTGAATTTGGTGCCTGGTGCAGCTATGGCTTGCTGAGTGCGGACTATACCAGTGTACTGGCATGCATGCTTCTGTGTGCTACTTGGTGATTGATCGACTAGCTAGTTGTCCGTCTTACAATATATCGTTGAATAAAAGTTGATGTTAAATC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_16062#0 CAAAAGCTATACAATTAATTAATCATCACTCGCGTTTTAACCATGGCCCCCTCCAAGCTC 60
consensus_16062#1 ------------------------------------------------------------
consensus_16062#0 TCCATAGCGTCGTTCTTCCTCGCCACGGCTCTTCTCCTGCTGGCTTTCGCCAGCGGCCAG 120
consensus_16062#1 ------------------------------------------------------------
consensus_16062#0 ACCACCAATGCCCCACCCCCACCACCGCCTCCGAACACGCAGTCCCCCGGAGGAGTCATA 180
consensus_16062#1 ------------------------------------------------------------
consensus_16062#0 TCAGATCTCGCGAACTACACGAGGTGCATCACTGCGATATTGTTCGGACGCCCCAATCCC 240
consensus_16062#1 ------------------------------------------------------------
consensus_16062#0 GAGCAGTTCTGCTGCCCGGCGATCTCGGAGCTCCCCAACAACGTCGCCGCCAGATGCGTG 300
consensus_16062#1 ------------------------------------------------------------
consensus_16062#0 TGCGCCGCTCTCAGGGCCACCGGACTATCAATCGGTATAACCGCGAGCAATAATGTCACA 360
consensus_16062#1 ------------------------------------------------------------
consensus_16062#0 GGTAGCATCCTCAAGATCTGCAACAAAGCTCCCCTGGACCTCTTGACTGTCAACTGCAGC 420
consensus_16062#1 ------------------------------------------------------------
consensus_16062#0 AGAGCCTAGCTGATCGCGATCTGGCTCTAGCTAATAAAGCATGCATGCACTACGCGCGTA 480
consensus_16062#1 ------------------------------------------------------------
consensus_16062#0 CTCTACCCTTAAATCGTAATTATATATTGTGCTGCTTGCGTAATTACTTATATATGTTAC 540
consensus_16062#1 ------------------------------------------ACTTATGATGATGGTTAC 18
* * * ** *****
consensus_16062#0 TCGTAT--GTACTT-AATTTGGGTCCTG-TGCAGCTATGCTT--CTA---GTCGACTATA 591
consensus_16062#1 TCGTGATGGTACTTGAATTTGGTGCCTGGTGCAGCTATGGCTTGCTGAGTGCGGACTATA 78
**** ****** ******* **** ********** * ** * *******
consensus_16062#0 CCAGTGTACTG-CATGCATGCTTCTGTGTGCTAGCTTGGTGATTGATCGACTAGCTAGTT 650
consensus_16062#1 CCAGTGTACTGGCATGCATGCTTCTGTGTGCTA-CTTGGTGATTGATCGACTAGCTAGTT 137
*********** ********************* **************************
consensus_16062#0 GTCCGTCTTACAATATATCGTTGAATAAAAGTTGATGTTAAAAATCGTGAAAAAAAAAAA 710
consensus_16062#1 GTCCGTCTTACAATATATCGTTGAATAAAAGTTGATGTTAAATC---------------- 181
******************************************
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||