cluster # 1772

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Oryza sativa
cluster # 1772 cluster # 1772 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_1772#0 length = 1108 sequences # 2

consensusID : consensus_1772#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1108
fasta sequence

                              [CCCACTCCGCAGTGTCTCCCTCGGATCCTCGATTCCGGGAGGTCGTCCTCGTCCTCGTCCATGGCGGCGGCGGCGGCGGCGAAGACGACGACGAGGCGGCGGCGGCGAGGGGTGCTGGACCTGGAGGCGCAGTTCGCCTTCTTCCGGTCGCAGCACCGGCACCCGGTGAACGCCGCGGCGCACGCGCTCCTCGCGTGGCCCATCCTCTTCACCGGCCTCCTCGTCCTCCACTTCCTCCCCTCCCCGCCCGCGCTCCCGCTCGACCCGGCGCTCGCCCTCGCCCTCGCCTACGCCGCCGCCTACGTCGCGGCCGACCGCCGCGCGGGGGCGCTCGCGGGGCTCCTCCTCGCCGCCGGCTGGGCTGCCAGCCGCGCCCTCGCCGCGCGCCTCGGGTTCGCGCTCGCCTGGAAGGCCGCGCTCGCCACCCAGCTCTTCTGCTGGACCTGGCAGTTCCTCGGCCATGGCCTCTTCGAGAAGAGAGGGCCGGCTGTGGGTGATCTCCCTGAGGTGTTCTTGATGGAGCCATTCCTCATCTTGTTGCAGATACTCAACAAGCAGTTTGGCTATGAGCCATACCCAGGTTTCAGCAAGAATGTGGACAAGAAAATGGAGGCCATTCTCAGGGAGAACAGGGAGGAGCTCAAGCAGAGGAAGGCCACCTGATTGATTTTGATTCGGAATCGATTCGAGAGGAAGTGTTACACATGTAGAACTTAGCATCTTTCGATTATTACCTACGACGATTCGTGTTGATCATGTAGTCATACAGTAAAACCCGAACTGTCTGAATATGATTGTGATGGTGTTGTTTGAGGCTTGCTCTGCCGATTGCTAGGAACAATATACAAGATGCAGAGATATGTTATAAATCCTACGCAAATGCGGGCATATTCAGATTTGCAAGTCCAAATGTTCACAGCGAGGTTACTCTTCGGCAGAGCATTTCGCCAAACAGCTCAGGAACACCACTGCAGCATGTCTTGCATTGCTCGATCTCGTTTTAGCATTTTGTACTGATTGTGTCGTTTGTATGCATGATGTTTCGATGTGATATGTAAATTACTGAACTAGCGGTTGCGCTGCTGCTGTTTGTAAAAAACTTCCGCCT]

[+] EMBL AK067255             [CCCACTCCGCAGTGTCTCCCTCGGATCCTCGATTCCGGGAGGTCGTCCTCGTCCTCGTCCATGGCGGCGGCGGCGGCGGCGAAGACGACGACGAGGCGGCGGCGGCGAGGGGTGCTGGACCTGGAGGCGCAGTTCGCCTTCTTCCGGTCGCAGCACCGGCACCCGGTGAACGCCGCGGCGCACGCGCTCCTCGCGTGGCCCATCCTCTTCACCGGCCTCCTCGTCCTCCACTTCCTCCCCTCCCCGCCCGCGCTCCCGCTCGACCCGGCGCTCGCCCTCGCCCTCGCCTACGCCGCCGCCTACGTCGCGGCCGACCGCCGCGCGGGGGCGCTCGCGGGGCTCCTCCTCGCCGCCGGCTGGGCTGCCAGCCGCGCCCTCGCCGCGCGCCTCGGGTTCGCGCTCGCCTGGAAGGCCGCGCTCGCCACCCAGCTCTTCTGCTGGACCTGGCAGTTCCTCGGCCATGGCCTCTTCGAGAAGAGAGGGCCGGCTGTGGGTGATCTCCCTGAGGTGTTCTTGATGGAGCCATTCCTCATCTTGTTGCAGATACTCAACAAGCAGTTTGGCTATGAGCCATACCCAGGTTTCAGCAAGAATGTGGACAAGAAAATGGAGGCCATTCTCAGGGAGAACAGGGAGGAGCTCAAGCAGAGGAAGGCCACCTGATTGATTTTGATTCGGAATCGATTCGAGAGGAAGTGTTACACATGTAGAACTTAGCATCTTTCGATTATTACCTACGACGATTCGTGTTGATCATGTAGTCATACAGTAAAACCCGAACTGTCTGAATATGATTGTGATGGTGTTGTTTGAGGCTTGCTCTGCCGATTGCTAGGAACAATATACAAGATGCAGAGATATGTTATAAATCCTACGCAAATGCGGGCATATTCAGATTTGCAAGTCCAAATGTTCACAGCGAGGTTACTCTTCGGCAGAGCATTTCGCCAAACAGCTCAGGAACACCACTGCAGCATGTCTTGCATTGCTCGATCTCGTTTTAGCATTTTGTACTGATTGTGTCGTTTGTATGCATGATGTTTCGATGTGATATGTAAATTACTGAACTAGCGGTTGCGCTGCTGCTGTTTGTAAAAAACTTCCGCCT]
[+] EMBL CA756721             [                                                                                                                                                                                GGCGCACGCGCTCCTCGCGTGGCCCATCCTCTTCACCGGCCTCCTCGTCCTCCACTTCCTCCCCTCCCCGCCCGCGCTCCCGCTCGACCCGGCGCTCGCCCTCGCCCTCGCCTACGCCGCCGCCTACGTCGCGGCCGACCGCCGCGCGGGGGCGCTCGCGGGGCTCCTCCTCGCCGACGGCTGGGCTGACAGCCGAGCCCTCAACGCGCGCCTAGGGTTCGCGCTCACCTGGAAGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]




>consensus_1772#0
CCCACTCCGCAGTGTCTCCCTCGGATCCTCGATTCCGGGAGGTCGTCCTCGTCCTCGTCC
ATGGCGGCGGCGGCGGCGGCGAAGACGACGACGAGGCGGCGGCGGCGAGGGGTGCTGGAC
CTGGAGGCGCAGTTCGCCTTCTTCCGGTCGCAGCACCGGCACCCGGTGAACGCCGCGGCG
CACGCGCTCCTCGCGTGGCCCATCCTCTTCACCGGCCTCCTCGTCCTCCACTTCCTCCCC
TCCCCGCCCGCGCTCCCGCTCGACCCGGCGCTCGCCCTCGCCCTCGCCTACGCCGCCGCC
TACGTCGCGGCCGACCGCCGCGCGGGGGCGCTCGCGGGGCTCCTCCTCGCCGCCGGCTGG
GCTGCCAGCCGCGCCCTCGCCGCGCGCCTCGGGTTCGCGCTCGCCTGGAAGGCCGCGCTC
GCCACCCAGCTCTTCTGCTGGACCTGGCAGTTCCTCGGCCATGGCCTCTTCGAGAAGAGA
GGGCCGGCTGTGGGTGATCTCCCTGAGGTGTTCTTGATGGAGCCATTCCTCATCTTGTTG
CAGATACTCAACAAGCAGTTTGGCTATGAGCCATACCCAGGTTTCAGCAAGAATGTGGAC
AAGAAAATGGAGGCCATTCTCAGGGAGAACAGGGAGGAGCTCAAGCAGAGGAAGGCCACC
TGATTGATTTTGATTCGGAATCGATTCGAGAGGAAGTGTTACACATGTAGAACTTAGCAT
CTTTCGATTATTACCTACGACGATTCGTGTTGATCATGTAGTCATACAGTAAAACCCGAA
CTGTCTGAATATGATTGTGATGGTGTTGTTTGAGGCTTGCTCTGCCGATTGCTAGGAACA
ATATACAAGATGCAGAGATATGTTATAAATCCTACGCAAATGCGGGCATATTCAGATTTG
CAAGTCCAAATGTTCACAGCGAGGTTACTCTTCGGCAGAGCATTTCGCCAAACAGCTCAG
GAACACCACTGCAGCATGTCTTGCATTGCTCGATCTCGTTTTAGCATTTTGTACTGATTG
TGTCGTTTGTATGCATGATGTTTCGATGTGATATGTAAATTACTGAACTAGCGGTTGCGC
TGCTGCTGTTTGTAAAAAACTTCCGCCT

clustalw multiple alignements is not computed in this case