cluster # 2239

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Oryza sativa
cluster # 2239 cluster # 2239 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_2239#0 length = 887 sequences # 2

consensusID : consensus_2239#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 887
fasta sequence

                              [GCTGCTGACATCAGTAGACCAACGATTGAATTCGATTGCCTTGCAGGTTTTGCTTATTCAAGTAAACCTATCCTTACAGATGAGTTTGGTTTAGTTCCCCATTCACCTGAATACACTGAAAGATATGGCCGCACTGATGACAGNACATGTACATGGAACTCCACCTCCTAAAACATTGGTAAGTCCAAAAGAAATATGCCACAAACCCTGCAATTCTAAACCAGTGAGCCCAGGTCTGTCAGGTCAAGAAGATATGNGAGCTTAGTCCAAGACTAACATATTATATTGAAGAAGGAATTGTTCCTGAGTCTCCGATGCTTGAAGTTGGCCACAAACATTTAGAGACAGACAGTGCTGCAAATGCTGATTTTGTGCAGCAAAAGGTTGATTTTTCAAAATCACACAGTGAGGGAGCAAAGGCCAATGAGTTGAAATCTAGAAATGGACCTCTGAACTTTGAGGGGAAAGGGCAATTTTTTTCTGAGATATCCAAACTTGCTGTCTCACCAGGAGAGAATGCCCTAGATCAGACTCAAGCAAACAAAGAAGAGCGGATGCATCCATCAAATGTGAAAATACATAGTCCAGCTGCTCATACTCCAATGGCAAATCTACTATGTGATAGTTTCTCTGATGATTGGCAGCTTAGGTCAGGAGGGGACACACCAGGGTCAGTCCGGGAAGCACCCAAGTACAAAAGACTTTGCAAATATGCTGACAAGATCAAAAGAGTTTCCTCCATGTCTTTAGATGACAGATATGATATTGCTGCTGGAGGAAACCACAATTTTGCTACCAAAAGAAACAAAAGGAGGGCCAAGATGTGTCTGGATACCTTTATTGATGATGAAGCTGAGGTGTCTGAAGATGCTGATGTTTCAGCGGAT]

[+] EMBL CB636299             [GCTGCTGACATCAGTAGACCAACGATTGAATTCGATTGCCTTGCAGGTTTTGCTTATTCAAGTAAACCTATCCTTACAGATGAGTTTGGTTTAGTTCCCCATTCACCTGAATACACTGAAAGATATGGCCGCACTGATGACAGNACATGTACATGGAACTCCACCTCCTAAAACATTGGTAAGTCCAAAAGAAATATGCCACAAACCCTGCAATTCTAAACCAGTGAGCCCAGGTCTGTCAGGTCAAGAAGATATGNGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL BP184956             [                                                                                                                                                                                                           acgaggGCAATTCTAAACCAGTGAGCCCAGGTCTGTCAGGTCAAGAAGATATG GAGCTTAGTCCAAGACTAACATATTATATTGAAGAAGGAATTGTTCCTGAGTCTCCGATGCTTGAAGTTGGCCACAAACATTTAGAGACAGACAGTGCTGCAAATGCTGATTTTGTGCAGCAAAAGGTTGATTTTTCAAAATCACACAGTGAGGGAGCAAAGGCCAATGAGTTGAAATCTAGAAATGGACCTCTGAACTTTGAGGGGAAAGGGCAATTTTTTTCTGAGATATCCAAACTTGCTGTCTCACCAGGAGAGAATGCCCTAGATCAGACTCAAGCAAACAAAGAAGAGCGGATGCATCCATCAAATGTGAAAATACATAGTCCAGCTGCTCATACTCCAATGGCAAATCTACTATGTGATAGTTTCTCTGATGATTGGCAGCTTAGGTCAGGAGGGGACACACCAGGGTCAGTCCGGGAAGCACCCAAGTACAAAAGACTTTGCAAATATGCTGACAAGATCAAAAGAGTTTCCTCCATGTCTTTAGATGACAGATATGATATTGCTGCTGGAGGAAACCACAATTTTGCTACCAAAAGAAACAAAAGGAGGGCCAAGATGTGTCTGGATACCTTTATTGATGATGAAGCTGAGGTGTCTGAAGATGCTGATGTTTCAGCGGAT]




>consensus_2239#0
GCTGCTGACATCAGTAGACCAACGATTGAATTCGATTGCCTTGCAGGTTTTGCTTATTCA
AGTAAACCTATCCTTACAGATGAGTTTGGTTTAGTTCCCCATTCACCTGAATACACTGAA
AGATATGGCCGCACTGATGACAGNACATGTACATGGAACTCCACCTCCTAAAACATTGGT
AAGTCCAAAAGAAATATGCCACAAACCCTGCAATTCTAAACCAGTGAGCCCAGGTCTGTC
AGGTCAAGAAGATATGNGAGCTTAGTCCAAGACTAACATATTATATTGAAGAAGGAATTG
TTCCTGAGTCTCCGATGCTTGAAGTTGGCCACAAACATTTAGAGACAGACAGTGCTGCAA
ATGCTGATTTTGTGCAGCAAAAGGTTGATTTTTCAAAATCACACAGTGAGGGAGCAAAGG
CCAATGAGTTGAAATCTAGAAATGGACCTCTGAACTTTGAGGGGAAAGGGCAATTTTTTT
CTGAGATATCCAAACTTGCTGTCTCACCAGGAGAGAATGCCCTAGATCAGACTCAAGCAA
ACAAAGAAGAGCGGATGCATCCATCAAATGTGAAAATACATAGTCCAGCTGCTCATACTC
CAATGGCAAATCTACTATGTGATAGTTTCTCTGATGATTGGCAGCTTAGGTCAGGAGGGG
ACACACCAGGGTCAGTCCGGGAAGCACCCAAGTACAAAAGACTTTGCAAATATGCTGACA
AGATCAAAAGAGTTTCCTCCATGTCTTTAGATGACAGATATGATATTGCTGCTGGAGGAA
ACCACAATTTTGCTACCAAAAGAAACAAAAGGAGGGCCAAGATGTGTCTGGATACCTTTA
TTGATGATGAAGCTGAGGTGTCTGAAGATGCTGATGTTTCAGCGGAT

clustalw multiple alignements is not computed in this case