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Oryza sativa
cluster # 3565 cluster # 3565       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3565#0 length = 1843 sequences # 2  

consensusID : consensus_3565#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1843
fasta sequence
                              [GGGATGAAGGACAAGGACAAGAAATAGGTGAAGCTATCTACTTCTCGATGCATCTATGTACGGAGGCGGCGGTAACACGGCGGCGGCTGCTGCTGCTTCTTCTTCTCCTGGTCACCTGCAGCTGCCTGTCTGCGAGAGAGAGAAGCAATAGCAGCAGCAGCAGCAGCAGGAGAGTGGTGAGGCATCTCCCGGGGTTCGATGGGGCGCTCCCCTTCGAGCTGGAGACCGGGTACGTGGAGGTGGACCGCATCGCCGGCGTGCGCCTCTTCTACTACTTCATCCGCTCGGAGAGCAGCCCGGCCGACGATCCCCTCTTGCTCTGGCTCACCGGCGGGCCAGGCTGCTCGGCCTTCTCCGGCCTCGTCTACGAGGTCGGACCCCTCACCTTCGATGTCCATGGCCATGGACATGGACAACTGCCAAGGCTCTTGTACAAGCCGGAGTCGTGGACCAAACGTACCAACGTCATCTTCCTCGACTCCCCTGTCGGAACTGGCTTTTCCTACGCTGACACCGACGCCGGATTCCGCACCGGCGATACCATTGCTGTCCACCACATTCACGTCTTCCTCAACAACTGGTTTCAGGAGGTGCACCCCGATTTCCTCTCCAATCCTCTATACATCGCCGGCGACTCCTACTCTGGGATGATTGTGCCGGCTGTCACCTTCGGAATCGCCACTTCATCACCCAAACCATCTCTCAATCTCAAGGGCTACCTTTTGGGCAATCCAGTCACTGATCACAACTTCGATGCTCCATCCAAAATTCCATTTGCCCATGGGATGGGTCTCATATCTGACCAACTGTATCAGGCATACAAGAAGAGCTGCAGTGTCAAGCACAACACCCAGCAGCAAAGCGTTCAGTGCACAAATACTCTTGATGCCATAGATGAGTGTGTCAAGGACATATACGGAAATCACATTCTGGAGCCTTACTGCACTTTTGCAAGCCCGCATAATCCGCGCATCGATAAGCCATTCACTTCAGGGACGGCAGAATATACAATGTCCAGAATATGGGCCAACAATGATACAGTAAGAGAGGCCCTTGGAATTCACCAGGGAACAGTTCCTTCGTGGCAAAGATGCAACTACGACATTCTGTACACTTATGACATCAAAAGTTCAGTAAGATACCATCTGGATTTGACAACTAGAGGCTACAGAAGCCTAATTTACAGTGGTGATCATGACATGATTATCCCTTTCATCGGCACGCAAGCCTGGATTAGATCTCTGAATTTCTCTGTCGTGGATGAGTGGAGACCATGGTTTGTGGATGGACAAGTTGCAGGATATATAAGGTCATACTCCAATAACCTCACATTCGCAACTGTCAAGGGTGGTGGACATACTGCTCCAGAATACATGCCAAAGCAATGCCTTGCTATGCTTGCAAGGTGGGTTTCTGGCAATCCTCTTTGACGATGGTGCATATATGTGTAAGAGAAAATTCCAGGATGGAGATATTACATCACAAGAAATTTATGATTTTGCTAAAATTGTGGCGACATTTTTTTCCCCATCACGGTTGAATGCTTTTCTCTTGGGTTGCGGCGGAGACTATACTCGCGCGTGTATTATATATGTCTGTTTCTTCACGAAGTGCATGAAGATTTGTCCCATGTGTAAGATCTGGAGAGTGAGAACAAAACATGGTTCAATACAGTGCAAATGATGGATCGAAGAGCATACTCCTACACGTCAATGTAAATAGACATGTAACATTTTATTACGCCGTCAGTGTGGCCCCCAGTTTTGTACACCGGAAATCCAATGTGTTTTACGATATCATTCTCTGAATCATCAGTACTTAAGGGTATAAAGCTAGATTTCAT]

[+] EMBL AK106667             [GGGATGAAGGACAAGGACAAGAAATAGGTGAAGCTATCTACTTCTCGATGCATCTATGTACGGAGGCGGCGGTAACACGGCGGCGGCTGCTGCTGCTTCTTCTTCTCCTGGTCACCTGCAGCTGCCTGTCTGCGAGAGAGAGAAGCAATAGCAGCAGCAGCAGCAGCAGGAGAGTGGTGAGGCATCTCCCGGGGTTCGATGGGGCGCTCCCCTTCGAGCTGGAGACCGGGTACGTGGAGGTGGACCGCATCGCCGGCGTGCGCCTCTTCTACTACTTCATCCGCTCGGAGAGCAGCCCGGCCGACGATCCCCTCTTGCTCTGGCTCACCGGCGGGCCAGGCTGCTCGGCCTTCTCCGGCCTCGTCTACGAGGTCGGACCCCTCACCTTCGATGTCCATGGCCATGGACATGGACAACTGCCAAGGCTCTTGTACAAGCCGGAGTCGTGGACCAAACGTACCAACGTCATCTTCCTCGACTCCCCTGTCGGAACTGGCTTTTCCTACGCTGACACCGACGCCGGATTCCGCACCGGCGATACCATTGCTGTCCACCACATTCACGTCTTCCTCAACAACTGGTTTCAGGAGGTGCACCCCGATTTCCTCTCCAATCCTCTATACATCGCCGGCGACTCCTACTCTGGGATGATTGTGCCGGCTGTCACCTTCGGAATCGCCACTTCATCACCCAAACCATCTCTCAATCTCAAGGGCTACCTTTTGGGCAATCCAGTCACTGATCACAACTTCGATGCTCCATCCAAAATTCCATTTGCCCATGGGATGGGTCTCATATCTGACCAACTGTATCAGGCATACAAGAAGAGCTGCAGTGTCAAGCACAACACCCAGCAGCAAAGCGTTCAGTGCACAAATACTCTTGATGCCATAGATGAGTGTGTCAAGGACATATACGGAAATCACATTCTGGAGCCTTACTGCACTTTTGCAAGCCCGCATAATCCGCGCATCGATAAGCCATTCACTTCAGGGACGGCAGAATATACAATGTCCAGAATATGGGCCAACAATGATACAGTAAGAGAGGCCCTTGGAATTCACCAGGGAACAGTTCCTTCGTGGCAAAGATGCAACTACGACATTCTGTACACTTATGACATCAAAAGTTCAGTAAGATACCATCTGGATTTGACAACTAGAGGCTACAGAAGCCTAATTTACAGTGGTGATCATGACATGATTATCCCTTTCATCGGCACGCAAGCCTGGATTAGATCTCTGAATTTCTCTGTCGTGGATGAGTGGAGACCATGGTTTGTGGATGGACAAGTTGCAGGATATATAAGGTCATACTCCAATAACCTCACATTCGCAACTGTCAAGGGTGGTGGACATACTGCTCCAGAATACATGCCAAAGCAATGCCTTGCTATGCTTGCAAGGTGGGTTTCTGGCAATCCTCTTTGACGATGGTGCATATATGTGTAAGAGAAAATTCCAGGATGGAGATATTACATCACAAGAAATTTATGATTTTGCTAAAATTGTGGCGACATTTTTTTCCCCATCACGGTTGAATGCTTTTCTCTTGGGTTGCGGCGGAGACTATACTCGCGCGTGTATTATATATGTCTGTTTCTTCACGAAGTGCATGAAGATTTGTCCCATGTGTAAGATCTGGAGAGTGAGAACAAAACATGGTTCAATACAGTGCAAATGATGGATCGAAGAGCATACTCCTACACGTCAATGTAAATAGACATGTAACATTTTATTACGCCGTCAGTGTGGCCCCCAGTTTTGTACACCGGAAATCCAATGTGTTTTACGATATCATTCTCTGAATCATCAGTAC                         ]
[-] EMBL CB620869             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ACCATCTGGATTTGACAACTAGAGGCTACAGAAGCCTAATTTACAGTGGTGATCATGACATGATTATCCCTTTCATCGGCACGCAAGCCTGGATTAGATCACTGAATTTCTCTGTCGTGGATGAGTGGAGACCATGGTTTGTGGATGGACAAGTTGCAGGATATACAAGGTCATACTCCAATAACCTCACATTCGCAACTGTCAAGGGTGGTGGACATACTGCTCCAGAATACATGCCAAAGCAATGCCTTGCTATGCTTGCAAGGTGGGTTTCTGGCAATCCTCTTTGACGATGGTGCATATATGTGTAAGAGAAAATTCCAGGATGGAGATATTACATCACAAGAAATTTATGATTTTGCTAAAATTGTGGCGACATTTTTTTCCCCATCACGGTTGAATGCTTTTCTCTTGGGTTGCGGCGGAGACTATACTCGCGCGTGTATTATATATGTCTGTTTCTTCACGAAGTGCATGAAGATTTGTCCCATGTGTAAGATCTGGAGAGTGAGAACAAAACATGGTTCAATACAGTGCAAATGATGGATCGAAGAGCATACTCCTACACGTCAATGTAAATAGACATGTAACATTTTATTACGCCGTCAGTGTGGCCCCCAGTTTTGTACACCGGAAATCCAATGTGTTTTACGATATCATTCTCTGAATCATCAGTTTTTAAGGGTATAAAGCTAGATTTCAT]


>consensus_3565#0 GGGATGAAGGACAAGGACAAGAAATAGGTGAAGCTATCTACTTCTCGATGCATCTATGTA CGGAGGCGGCGGTAACACGGCGGCGGCTGCTGCTGCTTCTTCTTCTCCTGGTCACCTGCA GCTGCCTGTCTGCGAGAGAGAGAAGCAATAGCAGCAGCAGCAGCAGCAGGAGAGTGGTGA GGCATCTCCCGGGGTTCGATGGGGCGCTCCCCTTCGAGCTGGAGACCGGGTACGTGGAGG TGGACCGCATCGCCGGCGTGCGCCTCTTCTACTACTTCATCCGCTCGGAGAGCAGCCCGG CCGACGATCCCCTCTTGCTCTGGCTCACCGGCGGGCCAGGCTGCTCGGCCTTCTCCGGCC TCGTCTACGAGGTCGGACCCCTCACCTTCGATGTCCATGGCCATGGACATGGACAACTGC CAAGGCTCTTGTACAAGCCGGAGTCGTGGACCAAACGTACCAACGTCATCTTCCTCGACT CCCCTGTCGGAACTGGCTTTTCCTACGCTGACACCGACGCCGGATTCCGCACCGGCGATA CCATTGCTGTCCACCACATTCACGTCTTCCTCAACAACTGGTTTCAGGAGGTGCACCCCG ATTTCCTCTCCAATCCTCTATACATCGCCGGCGACTCCTACTCTGGGATGATTGTGCCGG CTGTCACCTTCGGAATCGCCACTTCATCACCCAAACCATCTCTCAATCTCAAGGGCTACC TTTTGGGCAATCCAGTCACTGATCACAACTTCGATGCTCCATCCAAAATTCCATTTGCCC ATGGGATGGGTCTCATATCTGACCAACTGTATCAGGCATACAAGAAGAGCTGCAGTGTCA AGCACAACACCCAGCAGCAAAGCGTTCAGTGCACAAATACTCTTGATGCCATAGATGAGT GTGTCAAGGACATATACGGAAATCACATTCTGGAGCCTTACTGCACTTTTGCAAGCCCGC ATAATCCGCGCATCGATAAGCCATTCACTTCAGGGACGGCAGAATATACAATGTCCAGAA TATGGGCCAACAATGATACAGTAAGAGAGGCCCTTGGAATTCACCAGGGAACAGTTCCTT CGTGGCAAAGATGCAACTACGACATTCTGTACACTTATGACATCAAAAGTTCAGTAAGAT ACCATCTGGATTTGACAACTAGAGGCTACAGAAGCCTAATTTACAGTGGTGATCATGACA TGATTATCCCTTTCATCGGCACGCAAGCCTGGATTAGATCTCTGAATTTCTCTGTCGTGG ATGAGTGGAGACCATGGTTTGTGGATGGACAAGTTGCAGGATATATAAGGTCATACTCCA ATAACCTCACATTCGCAACTGTCAAGGGTGGTGGACATACTGCTCCAGAATACATGCCAA AGCAATGCCTTGCTATGCTTGCAAGGTGGGTTTCTGGCAATCCTCTTTGACGATGGTGCA TATATGTGTAAGAGAAAATTCCAGGATGGAGATATTACATCACAAGAAATTTATGATTTT GCTAAAATTGTGGCGACATTTTTTTCCCCATCACGGTTGAATGCTTTTCTCTTGGGTTGC GGCGGAGACTATACTCGCGCGTGTATTATATATGTCTGTTTCTTCACGAAGTGCATGAAG ATTTGTCCCATGTGTAAGATCTGGAGAGTGAGAACAAAACATGGTTCAATACAGTGCAAA TGATGGATCGAAGAGCATACTCCTACACGTCAATGTAAATAGACATGTAACATTTTATTA CGCCGTCAGTGTGGCCCCCAGTTTTGTACACCGGAAATCCAATGTGTTTTACGATATCAT TCTCTGAATCATCAGTACTTAAGGGTATAAAGCTAGATTTCAT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)