cluster # 3747

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 3747 cluster # 3747 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_3747#0 length = 562 sequences # 2

consensusID : consensus_3747#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 562
fasta sequence

                              [ATATGTTGGCACTTGACAGTTGACTGCACCAATTAGGACTTTCTTTTGTGGTACTCTTAGAAAGTTGTATTACTTGATGCAATTCGAGGGATGTGATTAAACCTTTTTTTAGTTTAAAAGGGGAATATAGCCTATTTCTCTGTTACATAATCAAAACTGAAATAGGTTTTGACAGTGGCCCATGTTCTGGATTCCCTTTCTGAAAAAGAAAAACAGAGAGAGAAGATCCCTGCACATCTGGCATCTCCTCTGTAACTCTGTTAGTGGGACCTGCAGTTGTCATTAACTCCTGAAAAATACGGCTTCCACTATCTCATGGCACAATTCTCCATGAATGAACGTGCAAAATTTAATGTATACATAGTTACATACCAAATTGCTTACCATTGGTCATTGGCGTGAAAACTTAGTTACTAGCCAAATGCCTGTGCGCTGCAAAGGTAACAATCTCCCAACCAACATAAAAGAACTAATTTCAAAGTGCACTGTAATTTTCTAATATTTAATTATAATCAAGAGAGTATTTCTATAGTAGAGTAACCCTGGAGTTTTTTTGTAGTTG]

[+] EMBL CF304315             [ATATGTTGGCACTTGACAGTTGACTGCACCAATTAGGACTTTCTTTTGTGGTACTCTTAGAAAGTTGTATTACTTGATGCAATTCGAGGGATGTGATTAAACCTTTTTTTAGTTTAAAAGGGGAATATAGCCTATTTCTCTGTTACATAATCAAAACTGAAATAGGTTTTGACAGTGGCCCATGTTCTGGATTCCCTTTCTGAAAAAGAAAAACAGAGAGAGAAGATCCCTGCACATCTGGCATCTCCTCTGTAACTCTGTTAGTGGGACCTGCAGTTGTCATTAACTCCTGAAAAATACGGCTTCCACTATCTCATGGCACAATTCTCCATGAATGAACGTGCAAAATTTAATGTATACATAGTTACATACCAAATTGCTTACCATTGGTCATTGGCGTGAAAACTTAGTTACTAGCCAAATGCCTGTGCGCTGCAAAGGTAACAATCTCCCAACCAACATAAAAGAACTAATTTCAAAGTGCACTGTAATTTTCTAATATTTAATTATAATCAAGAGAGTATTTCTATAGTAGAGTAACCCTGGAGTTTTTTTGTAGTTG]
[+] EMBL CF303120             [ATATGTTGGCACTTGACAGTTGACTGCACCAATTAGGACTTTCTTTTGTGGTACTCTTAGAAAGTTGTATTACTTGATGCAATTCGAGGGATGTGATTAAACCTTTTTTTAGTTTAAAAGGGGAATATAGCCTATTTCTCTGTTACATAATCAAAACTGAAATAGGTTTTGACAGTGGCCCATGTTCTGGATTCCCTTTCTGAAAAAGAAAAACAGAGAGAGAAGATCCCTGCACATCTGGCATCTCCTCTGTAACTCTGTTAGTGGGACCTGCAGTTGTCATTAACTCCTGAAAAATACGGCTTCCACTATCTCATGGCACAATTCTCCATGAATGAACGTGCAAAATTTAATGTATACATAGTTACATACCAAATTGCTTACCATTGGTCATTGGCGTGAAAACTTAGTTACTAGCCAAATGCCTGTGCGCTGCANAGGTAACAATCTCCCAACCAACATAAAAGAACTAATTTCAAAGTGCACTGTAATTNTCTAATATTTAATTATAATCAAGAGAGTATTTCTATAGTAGAG                         ]




>consensus_3747#0
ATATGTTGGCACTTGACAGTTGACTGCACCAATTAGGACTTTCTTTTGTGGTACTCTTAG
AAAGTTGTATTACTTGATGCAATTCGAGGGATGTGATTAAACCTTTTTTTAGTTTAAAAG
GGGAATATAGCCTATTTCTCTGTTACATAATCAAAACTGAAATAGGTTTTGACAGTGGCC
CATGTTCTGGATTCCCTTTCTGAAAAAGAAAAACAGAGAGAGAAGATCCCTGCACATCTG
GCATCTCCTCTGTAACTCTGTTAGTGGGACCTGCAGTTGTCATTAACTCCTGAAAAATAC
GGCTTCCACTATCTCATGGCACAATTCTCCATGAATGAACGTGCAAAATTTAATGTATAC
ATAGTTACATACCAAATTGCTTACCATTGGTCATTGGCGTGAAAACTTAGTTACTAGCCA
AATGCCTGTGCGCTGCAAAGGTAACAATCTCCCAACCAACATAAAAGAACTAATTTCAAA
GTGCACTGTAATTTTCTAATATTTAATTATAATCAAGAGAGTATTTCTATAGTAGAGTAA
CCCTGGAGTTTTTTTGTAGTTG

clustalw multiple alignements is not computed in this case