Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 4039 cluster # 4039       Sequences # 3       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4039#0 length = 755 sequences # 3  
consensusID : consensus_4039#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 755
fasta sequence 
                              [TACCAGTGGAGGAAATGGAAGCCCGATTGAGCACGGGGGAGAAGACGAAGAAGATGGCGACGACTTCTCGGCCGTCGTCGCCGCTGCCGCCGGAGGAGGAGACGGCGGCGGAGACGACGACGAGCGAGGAGGAAGAGCAGCAGCAGATGGAGAGGTTCTACGCGCTCGTGGCCAACGTTCGGGCCCTGAGAGCCATGTTCAAGGAGGCAGCGCTGCCCAGCTGCCGCGAAGACGACGTTAGCGGTGGCGGTGGCGGGGAGCAGCGCCAGAAGAGGCCGAGGGCGGCGCCGTGGCGGCCGGCGTTCGAGATGGCGGTCTTCGAGTGCGGCGGCGGCGGCGGCACTACCACCGACGACATCGAGGCGGCGACGACCAAGGGCCAGGACGGCAACTGCAAGAAGGGGAAGAGGAGCGAGGCGAACGCAGCTGCAGAGGAGGACAAAGGCGAAGTTATCGAGGGGAAACCAGTCGCCATCGCCATCGTCGCTGACGGGCCTGGTAAGTCGACGAC-GATGCCCGACTCGAATTGACGGCCGGCCGGCCCTGACCCTGACCCTGACACCGATGATGTTCTTGTGTACGTACGTGTGCAATATCTTTCATGCTCTGCTCCGGTGATATATATTTGTGACCAGATGAATTAATTGTGTGATGAATTATATATTTGTGACCAGATGAATTATATATTTGTACACAGATGAATTATATATTTGTGACCAGATGAATTAATCAGGACATCAGTTTGAATTCAAAAA]

[+] EMBL AK120501             [TACCAGTGGAGGAAATGGAAGCCCGATTGAGCACGGGGGAGAAGACGAAGAAGATGGCGACGACTTCTCGGCCGTCGTCGCCGCTGCCGCCGGAGGAGGAGACGGCGGCGGAGACGACGACGAGCGAGGAGGAAGAGCAGCAGCAGATGGAGAGGTTCTACGCGCTCGTGGCCAACGTTCGGGCCCTGAGAGCCATGTTCAAGGAGGCAGCGCTGCCCAGCTGCCGCGAAGACGACGTTAGCGGTGGCGGTGGCGGGGAGCAGCGCCAGAAGAGGCCGAGGGCGGCGCCGTGGCGGCCGGCGTTCGAGATGGCGGTCTTCGAGTGCGGCGGCGGCGGCGGCACTACCACCGACGACATCGAGGCGGCGACGACCAAGGGCCAGGACGGCAACTGCAAGAAGGGGAAGAGGAGCGAGGCGAACGCAGCTGCAGAGGAGGACAAAGGCGAAGTTATCGAGGGGAAACCAGTCGCCATCGCCATCGTCGCTGACGGGCCTGGTAAGTCGACGAC GATGCCCGACTCGAATTGACGGCCGGCCGGCCCTGACCCTGACCCTGACACCGATGATGTTCTTGTGTACGTACGTGTGCAATATCTTTCATGCTCTGCTCCGGTGATATATATTTGTGACCAGATGAATTAATTGTGTGATGAATTATATATTTGTGACCAGATGAATTATATATTTGTACACAGATGAATTATATATTTGTGACCAGATGA                               ]
[+] EMBL OSS16373A            [                                          AGACGAAGAAGATGGCGACGACTTCTCGGCNGTCGTCGCCGCTGCCGCCGGAGGAGGAGACGGCGGCGGAGACGACGACGAGCGAGGAGGAAGAGCANCAGCAGATGGAGAGGTTCTACGCGCTCNTNGCCAACNTTCGGGCCCTNANAGCCATGTTCAAGGAGGCAGCNCTGCCCAGCTGCCGCAAAGACGACGTTAGCGGTGGCGGTGGCGGGGAGCAGCGCCAGAAGAGGCCGAGGGCGGCGCCGTNGCGGCCGGCNTTCGAAATGGCGGTCTTCGAGTGCGGCGGCGGCGGCGGCACTACCACCGACGACATCNAGGCGGCGACGACCAAGGGCCANGACGGCAACTTCAAGAAGGGGAAGAGGAGCna                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL AU101863             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          TCGCCATCGTCGCTGACGGGCCTGGTAAGTCGACGACNGATGCCCGACTCGAATTGAC GCCGGCCGGCCCTGACCCTGACCCTGACACCGATGATGTTCTTGTGTACGTACGTGTGCAATATCTTTCATGCTCTGCTCCGGTGATATATATTTGTGACCAGATGAATTAATTGTGTGATGAATTATATATTTGTGACCAGATGAATTATATATTTGTACACAGATGAATTATATATTTGTGACCAGATGAATTAATCAGGACATCAGTTTGAATTCAAAAA]




>consensus_4039#0
TACCAGTGGAGGAAATGGAAGCCCGATTGAGCACGGGGGAGAAGACGAAGAAGATGGCGA
CGACTTCTCGGCCGTCGTCGCCGCTGCCGCCGGAGGAGGAGACGGCGGCGGAGACGACGA
CGAGCGAGGAGGAAGAGCAGCAGCAGATGGAGAGGTTCTACGCGCTCGTGGCCAACGTTC
GGGCCCTGAGAGCCATGTTCAAGGAGGCAGCGCTGCCCAGCTGCCGCGAAGACGACGTTA
GCGGTGGCGGTGGCGGGGAGCAGCGCCAGAAGAGGCCGAGGGCGGCGCCGTGGCGGCCGG
CGTTCGAGATGGCGGTCTTCGAGTGCGGCGGCGGCGGCGGCACTACCACCGACGACATCG
AGGCGGCGACGACCAAGGGCCAGGACGGCAACTGCAAGAAGGGGAAGAGGAGCGAGGCGA
ACGCAGCTGCAGAGGAGGACAAAGGCGAAGTTATCGAGGGGAAACCAGTCGCCATCGCCA
TCGTCGCTGACGGGCCTGGTAAGTCGACGACGATGCCCGACTCGAATTGACGGCCGGCCG
GCCCTGACCCTGACCCTGACACCGATGATGTTCTTGTGTACGTACGTGTGCAATATCTTT
CATGCTCTGCTCCGGTGATATATATTTGTGACCAGATGAATTAATTGTGTGATGAATTAT
ATATTTGTGACCAGATGAATTATATATTTGTACACAGATGAATTATATATTTGTGACCAG
ATGAATTAATCAGGACATCAGTTTGAATTCAAAAA

clustalw multiple alignements is not computed in this case
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)