cluster # 4042

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 4042 cluster # 4042 Sequences # 3 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_4042#0 length = 2766 sequences # 2

consensus_4042#1 length = 771 sequences # 1

consensusID : consensus_4042#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 2766
fasta sequence

                              [GGGGGGGGGGGCAAACGCTCGCATTTGCCACTCCTGGCGAGGCAAAGCCTCTCCAACTTTCTCCTAACGAAAACCACGCCACGAGAAGGAAGTGAGCCAACGACGCTGGAATTTTTTGAAAATTTCAGAGAAAATTTACCGGAGGAGTTCGAATTTCTTTCGGGTATGAGGAGGAGAGTTGCACTGAGCACGGCGATTGCGTTGTTAGTGGGTGCTCAATTATGTGTGGCGGCGGAGGTGGAGGTCGCCGGCGCCGGCGGTGGGGTTGTGCGGCGGCGGTCGCTCCACCAGCCGTTCTTCCCAATCGAGTGGTCGCCGCCGCCGCCGATGTCCGGGAGCGAGGCCGTCCCGCCGCCGCCGCCTGCGGCCGCGGCGTCGGCCACCACCGGCGGGGGGCGGTCGACGACCACCGTCATGAACACCGTCGCCATCGCGCTCTCGGCGGGCCTCGTGGCGCTCGCGGTGGCGTCCTACTCCTGCTGCCTCCTGCTGCGGCGACGACGACGCGAGGAGGAGGACGACGGCGACCGCGCCGCGAAGCGGGCGGTGGGGGCGGCGGCGGCGGTGGCGGCGAGAGTCCCTAGCGATGTCGGGAGCAGCTCCCGCCAGCACCGGTCGCCGCCGCCGAGCTCGACGGCGTCGGACGCGATATACCTCGACCCGCTCACGACGCTGGTGGAGGTGCGCCAGCACGAAAAGAGCCCGGACCTCCGCCCGCTCCCGCTGCTGAAGCAGCCGAGCCCTGACCTCCGGCCGTTGCCGCCGCTGAAGCGGCCGGAATCGCAACCCCCGCCTCCGCCACCGTCCACTCCGCCGTTGACCACCACGGGGTATTCCACCGACGAGGAGGACCAGGCCACGTACTACACCGCGCCGAAGACCGCCATGTCGTCGTTCAGCCGGAGCACGAGCCAGCACAGCACGCTGGAACAAACAGCCATGCCGCCCATGGCCGCGCCTGCACCGCCGCAAACCAATCCCCCACGACCTGTTCGTCCGCCACCGCCGCCGCCCCCGCCGAGGCAGAGGCTGCTCCGGCCGCTCCCGGCAGAATCGCCGCCGCCCGCCGCGCTGGCCAATCTGGAACTAACCGGTTCCCCCGTCAAACCCGCTGTTGAAGACAGGGGGGGCGAGAATTCCGGCGCCGCGCGGCCGCCCAAGCCGCCGCACCTGAAGCCGCTGCACTGGGACAAGCTCCGGGCAATCTCCGGCCGCACCACCGTGTGGGATCAGGTCAAGAACTCCGACACATTCCGCGTCGACGAGGAGGCGATGGAGAGCTTGTTCCTGAACAGCGGCGGCGGCGGCGCGGGGAGCTCGGACCCGGCGGCGAGGAGGGGGGGATCCGGGAAGCAGGAGAGGCGGTTGCTTGACCCGAAGCGGCTGCAGAACGTCGCGATCATGCTCAAATCGCTCAACGTGGCCGCCGACGAAGTGATTGGTGCACTCGTGCGTGGAAATCCTGAAGATTTAGGATCTGAGTTCTATGAAACACTAGCTAAGATGGCACCAACAAAAGAAGAAGAATTGAAACTAAAAGGTTATAGTGGCGATTTGTCAAAAATTGATCCAGCAGAGCGCTTTCTGAAAGATGTACTTGGAGTTCCTTTTGCCTTCGAGAGAGTGGATGCGATGCTGTACAGAGCAAATTTTGACAATGAAGTGAATTATTTAAGGAAATCTTTTGGAACATTGGAGGCAGCCTGTGAAGAGTTAAGAAGCAGCAAACTTTTTTTGAAGCTGCTAGATGCAGTTCTAAAAACCGGGAACCGCATGAATGATGGAACCAATCGAGGCGAGGCGAGGGCTTTCAAGCTTGATACTCTCCTAAAGCTTGCAGACATCAAGTCAACAGATGGTAGAACGACATTGCTTCACTTCGTGGTTAAAGAGATCATCCGATCAGAAGGCTTCGATTCTGATCAGAGCGCGGTTAATCCTGGCAGCGGCAGCAAGGAACAGTTCAAAAGGGACGGCTTGAAATTACTTGCAGGGCTCAGCAGTGAGCTCTCCAACGTGAAGAGAGCGGCCACACTGGAGATGGACACACTGAGCGGCAACATCCTGAGGCTCGAAGCCGATCTCGAGAAGGTGAAGCTTGTCCTACAGCTCAAGGAGACTTGCTCAGATCAAGGCGCGAGCGAGAACTTCTTCCAGGCAATGGTTGTCTTCCTCAGAAGAGCAGAGGCAGAGATCAAGGACATGAAAACCGCAGAGGAGAACGCGTTGCGCCTCGTGAAGGAGACGACGGAGTACTTCCATGGCGACGCCACCAAGGAGGAGCCTCACCCTCTGAGGATATTCGTGGTGGTGGATGAATTCCTCCTGATACTGGACCGTGTTTGCAGGGACGTCGGCAGGACGCCGGAGAGGGTGATGATGGGCTCCGGTAAGTCGTTCCGCGTCCCTGCAGGTACCTCATTGCCGCCTCATCGGAATGAGAACCGGCGAGTTCTTAGCTCCTCCGATGAGGACAGCTCGTCATCTTAGGAGCAAACATTTTTGGTGCATAGGTTAGCTGATAAGATTTGAGAGTAGTGATTCTTCCGGAGCTGAACATTGTGGTGTATAGACTGTAATCACCGTCAGAAATAAGGGAGTCGTCACTGTCTGTCACTGTTAAAAGTAGATGTTTACCAAAGCTAAAGAAAGGTAGCTGTACAAACTACAAAGGCATTCAGTATTATGGTAGTATGTTCTTACCATTCAGCTCAAATAGCATCTGTTTGAGAATTATCATATTAAGAGAAAATATATTTGTTGGAA]

[+] EMBL AK120511             [GGGGGGGGGGGCAAACGCTCGCATTTGCCACTCCTGGCGAGGCAAAGCCTCTCCAACTTTCTCCTAACGAAAACCACGCCACGAGAAGGAAGTGAGCCAACGACGCTGGAATTTTTTGAAAATTTCAGAGAAAATTTACCGGAGGAGTTCGAATTTCTTTCGGGTATGAGGAGGAGAGTTGCACTGAGCACGGCGATTGCGTTGTTAGTGGGTGCTCAATTATGTGTGGCGGCGGAGGTGGAGGTCGCCGGCGCCGGCGGTGGGGTTGTGCGGCGGCGGTCGCTCCACCAGCCGTTCTTCCCAATCGAGTGGTCGCCGCCGCCGCCGATGTCCGGGAGCGAGGCCGTCCCGCCGCCGCCGCCTGCGGCCGCGGCGTCGGCCACCACCGGCGGGGGGCGGTCGACGACCACCGTCATGAACACCGTCGCCATCGCGCTCTCGGCGGGCCTCGTGGCGCTCGCGGTGGCGTCCTACTCCTGCTGCCTCCTGCTGCGGCGACGACGACGCGAGGAGGAGGACGACGGCGACCGCGCCGCGAAGCGGGCGGTGGGGGCGGCGGCGGCGGTGGCGGCGAGAGTCCCTAGCGATGTCGGGAGCAGCTCCCGCCAGCACCGGTCGCCGCCGCCGAGCTCGACGGCGTCGGACGCGATATACCTCGACCCGCTCACGACGCTGGTGGAGGTGCGCCAGCACGAAAAGAGCCCGGACCTCCGCCCGCTCCCGCTGCTGAAGCAGCCGAGCCCTGACCTCCGGCCGTTGCCGCCGCTGAAGCGGCCGGAATCGCAACCCCCGCCTCCGCCACCGTCCACTCCGCCGTTGACCACCACGGGGTATTCCACCGACGAGGAGGACCAGGCCACGTACTACACCGCGCCGAAGACCGCCATGTCGTCGTTCAGCCGGAGCACGAGCCAGCACAGCACGCTGGAACAAACAGCCATGCCGCCCATGGCCGCGCCTGCACCGCCGCAAACCAATCCCCCACGACCTGTTCGTCCGCCACCGCCGCCGCCCCCGCCGAGGCAGAGGCTGCTCCGGCCGCTCCCGGCAGAATCGCCGCCGCCCGCCGCGCTGGCCAATCTGGAACTAACCGGTTCCCCCGTCAAACCCGCTGTTGAAGACAGGGGGGGCGAGAATTCCGGCGCCGCGCGGCCGCCCAAGCCGCCGCACCTGAAGCCGCTGCACTGGGACAAGCTCCGGGCAATCTCCGGCCGCACCACCGTGTGGGATCAGGTCAAGAACTCCGACACATTCCGCGTCGACGAGGAGGCGATGGAGAGCTTGTTCCTGAACAGCGGCGGCGGCGGCGCGGGGAGCTCGGACCCGGCGGCGAGGAGGGGGGGATCCGGGAAGCAGGAGAGGCGGTTGCTTGACCCGAAGCGGCTGCAGAACGTCGCGATCATGCTCAAATCGCTCAACGTGGCCGCCGACGAAGTGATTGGTGCACTCGTGCGTGGAAATCCTGAAGATTTAGGATCTGAGTTCTATGAAACACTAGCTAAGATGGCACCAACAAAAGAAGAAGAATTGAAACTAAAAGGTTATAGTGGCGATTTGTCAAAAATTGATCCAGCAGAGCGCTTTCTGAAAGATGTACTTGGAGTTCCTTTTGCCTTCGAGAGAGTGGATGCGATGCTGTACAGAGCAAATTTTGACAATGAAGTGAATTATTTAAGGAAATCTTTTGGAACATTGGAGGCAGCCTGTGAAGAGTTAAGAAGCAGCAAACTTTTTTTGAAGCTGCTAGATGCAGTTCTAAAAACCGGGAACCGCATGAATGATGGAACCAATCGAGGCGAGGCGAGGGCTTTCAAGCTTGATACTCTCCTAAAGCTTGCAGACATCAAGTCAACAGATGGTAGAACGACATTGCTTCACTTCGTGGTTAAAGAGATCATCCGATCAGAAGGCTTCGATTCTGATCAGAGCGCGGTTAATCCTGGCAGCGGCAGCAAGGAACAGTTCAAAAGGGACGGCTTGAAATTACTTGCAGGGCTCAGCAGTGAGCTCTCCAACGTGAAGAGAGCGGCCACACTGGAGATGGACACACTGAGCGGCAACATCCTGAGGCTCGAAGCCGATCTCGAGAAGGTGAAGCTTGTCCTACAGCTCAAGGAGACTTGCTCAGATCAAGGCGCGAGCGAGAACTTCTTCCAGGCAATGGTTGTCTTCCTCAGAAGAGCAGAGGCAGAGATCAAGGACATGAAAACCGCAGAGGAGAACGCGTTGCGCCTCGTGAAGGAGACGACGGAGTACTTCCATGGCGACGCCACCAAGGAGGAGCCTCACCCTCTGAGGATATTCGTGGTGGTGGATGAATTCCTCCTGATACTGGACCGTGTTTGCAGGGACGTCGGCAGGACGCCGGAGAGGGTGATGATGGGCTCCGGTAAGTCGTTCCGCGTCCCTGCAGGTACCTCATTGCCGCCTCATCGGAATGAGAACCGGCGAGTTCTTAGCTCCTCCGATGAGGACAGCTCGTCATCTTAGGAGCAAACATTTTTGGTGCATAGGTTAGCTGATAAGATTTGAGAGTAGTGATTCTTCCGGAGCTGAACATTGTGGTGTATAGACTGTAATCACCGTCAGAAATAAGGGAGTCGTCACTGTCTGTCACTGTTAAAAGTAGATGTTTACCAAAGCTAAAGAAAGGTAGCTGTACAAACTACAAAGGCATTCAGTATTATGGTAGTATGTTCTTACCATTCAGCTCAAATAGCATCTGTTTGAGAATTATCATATTAAGAGAAAATATATTTGTTGGAA]
[+] EMBL AU162593             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ACCACCACGGGGTATTCCACCGACGAGGAGGACCAGGCCACGTACTACACCGCGCCGAAGACCGCCATGTCGTCGTTCAGCCGGAGCACGAGCCAGCACAGCACGCTGGAACAAACAGCCATGCCGCCCATGGCCGCGCCTGCACCGCCGCAAACCAATCCCCCACGACCTGTTCGTCCGCCACCGCCGCCGCCCCCGCCGAGGCAGAGGCTGCTCCGGCCGCTCCCGGCAGAATCGCCGCCGCCCGCCGCGCTGGCCAATCTGGAACTAACCGGTTCCCCCGTCAAACCCGCTGTTGAAGACAGGGGAGGCGAGAATT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]




>consensus_4042#0
GGGGGGGGGGGCAAACGCTCGCATTTGCCACTCCTGGCGAGGCAAAGCCTCTCCAACTTT
CTCCTAACGAAAACCACGCCACGAGAAGGAAGTGAGCCAACGACGCTGGAATTTTTTGAA
AATTTCAGAGAAAATTTACCGGAGGAGTTCGAATTTCTTTCGGGTATGAGGAGGAGAGTT
GCACTGAGCACGGCGATTGCGTTGTTAGTGGGTGCTCAATTATGTGTGGCGGCGGAGGTG
GAGGTCGCCGGCGCCGGCGGTGGGGTTGTGCGGCGGCGGTCGCTCCACCAGCCGTTCTTC
CCAATCGAGTGGTCGCCGCCGCCGCCGATGTCCGGGAGCGAGGCCGTCCCGCCGCCGCCG
CCTGCGGCCGCGGCGTCGGCCACCACCGGCGGGGGGCGGTCGACGACCACCGTCATGAAC
ACCGTCGCCATCGCGCTCTCGGCGGGCCTCGTGGCGCTCGCGGTGGCGTCCTACTCCTGC
TGCCTCCTGCTGCGGCGACGACGACGCGAGGAGGAGGACGACGGCGACCGCGCCGCGAAG
CGGGCGGTGGGGGCGGCGGCGGCGGTGGCGGCGAGAGTCCCTAGCGATGTCGGGAGCAGC
TCCCGCCAGCACCGGTCGCCGCCGCCGAGCTCGACGGCGTCGGACGCGATATACCTCGAC
CCGCTCACGACGCTGGTGGAGGTGCGCCAGCACGAAAAGAGCCCGGACCTCCGCCCGCTC
CCGCTGCTGAAGCAGCCGAGCCCTGACCTCCGGCCGTTGCCGCCGCTGAAGCGGCCGGAA
TCGCAACCCCCGCCTCCGCCACCGTCCACTCCGCCGTTGACCACCACGGGGTATTCCACC
GACGAGGAGGACCAGGCCACGTACTACACCGCGCCGAAGACCGCCATGTCGTCGTTCAGC
CGGAGCACGAGCCAGCACAGCACGCTGGAACAAACAGCCATGCCGCCCATGGCCGCGCCT
GCACCGCCGCAAACCAATCCCCCACGACCTGTTCGTCCGCCACCGCCGCCGCCCCCGCCG
AGGCAGAGGCTGCTCCGGCCGCTCCCGGCAGAATCGCCGCCGCCCGCCGCGCTGGCCAAT
CTGGAACTAACCGGTTCCCCCGTCAAACCCGCTGTTGAAGACAGGGGGGGCGAGAATTCC
GGCGCCGCGCGGCCGCCCAAGCCGCCGCACCTGAAGCCGCTGCACTGGGACAAGCTCCGG
GCAATCTCCGGCCGCACCACCGTGTGGGATCAGGTCAAGAACTCCGACACATTCCGCGTC
GACGAGGAGGCGATGGAGAGCTTGTTCCTGAACAGCGGCGGCGGCGGCGCGGGGAGCTCG
GACCCGGCGGCGAGGAGGGGGGGATCCGGGAAGCAGGAGAGGCGGTTGCTTGACCCGAAG
CGGCTGCAGAACGTCGCGATCATGCTCAAATCGCTCAACGTGGCCGCCGACGAAGTGATT
GGTGCACTCGTGCGTGGAAATCCTGAAGATTTAGGATCTGAGTTCTATGAAACACTAGCT
AAGATGGCACCAACAAAAGAAGAAGAATTGAAACTAAAAGGTTATAGTGGCGATTTGTCA
AAAATTGATCCAGCAGAGCGCTTTCTGAAAGATGTACTTGGAGTTCCTTTTGCCTTCGAG
AGAGTGGATGCGATGCTGTACAGAGCAAATTTTGACAATGAAGTGAATTATTTAAGGAAA
TCTTTTGGAACATTGGAGGCAGCCTGTGAAGAGTTAAGAAGCAGCAAACTTTTTTTGAAG
CTGCTAGATGCAGTTCTAAAAACCGGGAACCGCATGAATGATGGAACCAATCGAGGCGAG
GCGAGGGCTTTCAAGCTTGATACTCTCCTAAAGCTTGCAGACATCAAGTCAACAGATGGT
AGAACGACATTGCTTCACTTCGTGGTTAAAGAGATCATCCGATCAGAAGGCTTCGATTCT
GATCAGAGCGCGGTTAATCCTGGCAGCGGCAGCAAGGAACAGTTCAAAAGGGACGGCTTG
AAATTACTTGCAGGGCTCAGCAGTGAGCTCTCCAACGTGAAGAGAGCGGCCACACTGGAG
ATGGACACACTGAGCGGCAACATCCTGAGGCTCGAAGCCGATCTCGAGAAGGTGAAGCTT
GTCCTACAGCTCAAGGAGACTTGCTCAGATCAAGGCGCGAGCGAGAACTTCTTCCAGGCA
ATGGTTGTCTTCCTCAGAAGAGCAGAGGCAGAGATCAAGGACATGAAAACCGCAGAGGAG
AACGCGTTGCGCCTCGTGAAGGAGACGACGGAGTACTTCCATGGCGACGCCACCAAGGAG
GAGCCTCACCCTCTGAGGATATTCGTGGTGGTGGATGAATTCCTCCTGATACTGGACCGT
GTTTGCAGGGACGTCGGCAGGACGCCGGAGAGGGTGATGATGGGCTCCGGTAAGTCGTTC
CGCGTCCCTGCAGGTACCTCATTGCCGCCTCATCGGAATGAGAACCGGCGAGTTCTTAGC
TCCTCCGATGAGGACAGCTCGTCATCTTAGGAGCAAACATTTTTGGTGCATAGGTTAGCT
GATAAGATTTGAGAGTAGTGATTCTTCCGGAGCTGAACATTGTGGTGTATAGACTGTAAT
CACCGTCAGAAATAAGGGAGTCGTCACTGTCTGTCACTGTTAAAAGTAGATGTTTACCAA
AGCTAAAGAAAGGTAGCTGTACAAACTACAAAGGCATTCAGTATTATGGTAGTATGTTCT
TACCATTCAGCTCAAATAGCATCTGTTTGAGAATTATCATATTAAGAGAAAATATATTTG
TTGGAA

consensusID : consensus_4042#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 771
fasta sequence

                              [AGAACGACATTGCTTCACTTCGTGGTTAAAGAGATCATCCGATCAGAAGGCTTCGATTCTGATCAGAGCGCGGTTAATCCTGGCAGCGGCAGCAAGGAACAGTTCAAAAGGGACGGCTTGAAATTACTTGCAGGGCTCAGCAGTGAGCTCTCCAACGTGAAGAGAGCGGCCACACTGGAGATGGACACACTGAGCGGCAACATCCTGAGGCTCGAAGCCGATCTCGAGAAGGTGAAGCTTGTCCTACAGCTCAAGGAGACTTGCTCAGATCAAGGCGCGAGCGAGAACTTCTTCCAGGCAATGGTTGTCTTCCTCAGAAGAGCAGAGGCAGAGATCAAGAACATGAAAACCGCAGAGGAGCCTCACCCTCTGAGGATATTCGTGGTGGTGGATGAATTCCTCCTGATACTGGACCGTGTTTGCAGGGACGTCGGCAGGACGCCGGAGAGGGTGATGATGGGCTCCGGTAAGTCGTTCCGCGTCCCTGCAGGTACCTCATTGCCGCCTCATCGGAATGAGAACCGGCGAGTTCTTAGCTCCTCCGATGAGGACAGCTCGTCATCTTAGGAGCAAACATTTTTGGTGCATAGGTTAGCTGATAAGATTTGAGAGTAGTGATTCTTCCGGAGCTGAACATTGTGGTGTATAGACTGTAATCACCGTCAGAAATAAGGGAGTCGTCACTGTCTGTCACTGTTAAAAGTAGATGTTTACCAAAGCTAAAGAAAGGTAGCTGTACAAACTACAAAGGCATTCAGTATTATGGTAGTA]

[+] EMBL AK059131             [AGAACGACATTGCTTCACTTCGTGGTTAAAGAGATCATCCGATCAGAAGGCTTCGATTCTGATCAGAGCGCGGTTAATCCTGGCAGCGGCAGCAAGGAACAGTTCAAAAGGGACGGCTTGAAATTACTTGCAGGGCTCAGCAGTGAGCTCTCCAACGTGAAGAGAGCGGCCACACTGGAGATGGACACACTGAGCGGCAACATCCTGAGGCTCGAAGCCGATCTCGAGAAGGTGAAGCTTGTCCTACAGCTCAAGGAGACTTGCTCAGATCAAGGCGCGAGCGAGAACTTCTTCCAGGCAATGGTTGTCTTCCTCAGAAGAGCAGAGGCAGAGATCAAGAACATGAAAACCGCAGAGGAGCCTCACCCTCTGAGGATATTCGTGGTGGTGGATGAATTCCTCCTGATACTGGACCGTGTTTGCAGGGACGTCGGCAGGACGCCGGAGAGGGTGATGATGGGCTCCGGTAAGTCGTTCCGCGTCCCTGCAGGTACCTCATTGCCGCCTCATCGGAATGAGAACCGGCGAGTTCTTAGCTCCTCCGATGAGGACAGCTCGTCATCTTAGGAGCAAACATTTTTGGTGCATAGGTTAGCTGATAAGATTTGAGAGTAGTGATTCTTCCGGAGCTGAACATTGTGGTGTATAGACTGTAATCACCGTCAGAAATAAGGGAGTCGTCACTGTCTGTCACTGTTAAAAGTAGATGTTTACCAAAGCTAAAGAAAGGTAGCTGTACAAACTACAAAGGCATTCAGTATTATGGTAGTA]




>consensus_4042#1
AGAACGACATTGCTTCACTTCGTGGTTAAAGAGATCATCCGATCAGAAGGCTTCGATTCT
GATCAGAGCGCGGTTAATCCTGGCAGCGGCAGCAAGGAACAGTTCAAAAGGGACGGCTTG
AAATTACTTGCAGGGCTCAGCAGTGAGCTCTCCAACGTGAAGAGAGCGGCCACACTGGAG
ATGGACACACTGAGCGGCAACATCCTGAGGCTCGAAGCCGATCTCGAGAAGGTGAAGCTT
GTCCTACAGCTCAAGGAGACTTGCTCAGATCAAGGCGCGAGCGAGAACTTCTTCCAGGCA
ATGGTTGTCTTCCTCAGAAGAGCAGAGGCAGAGATCAAGAACATGAAAACCGCAGAGGAG
CCTCACCCTCTGAGGATATTCGTGGTGGTGGATGAATTCCTCCTGATACTGGACCGTGTT
TGCAGGGACGTCGGCAGGACGCCGGAGAGGGTGATGATGGGCTCCGGTAAGTCGTTCCGC
GTCCCTGCAGGTACCTCATTGCCGCCTCATCGGAATGAGAACCGGCGAGTTCTTAGCTCC
TCCGATGAGGACAGCTCGTCATCTTAGGAGCAAACATTTTTGGTGCATAGGTTAGCTGAT
AAGATTTGAGAGTAGTGATTCTTCCGGAGCTGAACATTGTGGTGTATAGACTGTAATCAC
CGTCAGAAATAAGGGAGTCGTCACTGTCTGTCACTGTTAAAAGTAGATGTTTACCAAAGC
TAAAGAAAGGTAGCTGTACAAACTACAAAGGCATTCAGTATTATGGTAGTA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_4042#0      GGGGGGGGGGGCAAACGCTCGCATTTGCCACTCCTGGCGAGGCAAAGCCTCTCCAACTTT 60
consensus_4042#1      ------------------------------------------------------------
                                                                                  

consensus_4042#0      CTCCTAACGAAAACCACGCCACGAGAAGGAAGTGAGCCAACGACGCTGGAATTTTTTGAA 120
consensus_4042#1      ------------------------------------------------------------
                                                                                  

consensus_4042#0      AATTTCAGAGAAAATTTACCGGAGGAGTTCGAATTTCTTTCGGGTATGAGGAGGAGAGTT 180
consensus_4042#1      ------------------------------------------------------------
                                                                                  

consensus_4042#0      GCACTGAGCACGGCGATTGCGTTGTTAGTGGGTGCTCAATTATGTGTGGCGGCGGAGGTG 240
consensus_4042#1      ------------------------------------------------------------
                                                                                  

consensus_4042#0      GAGGTCGCCGGCGCCGGCGGTGGGGTTGTGCGGCGGCGGTCGCTCCACCAGCCGTTCTTC 300
consensus_4042#1      ------------------------------------------------------------
                                                                                  

consensus_4042#0      CCAATCGAGTGGTCGCCGCCGCCGCCGATGTCCGGGAGCGAGGCCGTCCCGCCGCCGCCG 360
consensus_4042#1      ------------------------------------------------------------
                                                                                  

consensus_4042#0      CCTGCGGCCGCGGCGTCGGCCACCACCGGCGGGGGGCGGTCGACGACCACCGTCATGAAC 420
consensus_4042#1      ------------------------------------------------------------
                                                                                  

consensus_4042#0      ACCGTCGCCATCGCGCTCTCGGCGGGCCTCGTGGCGCTCGCGGTGGCGTCCTACTCCTGC 480
consensus_4042#1      ------------------------------------------------------------
                                                                                  

consensus_4042#0      TGCCTCCTGCTGCGGCGACGACGACGCGAGGAGGAGGACGACGGCGACCGCGCCGCGAAG 540
consensus_4042#1      ------------------------------------------------------------
                                                                                  

consensus_4042#0      CGGGCGGTGGGGGCGGCGGCGGCGGTGGCGGCGAGAGTCCCTAGCGATGTCGGGAGCAGC 600
consensus_4042#1      ------------------------------------------------------------
                                                                                  

consensus_4042#0      TCCCGCCAGCACCGGTCGCCGCCGCCGAGCTCGACGGCGTCGGACGCGATATACCTCGAC 660
consensus_4042#1      ------------------------------------------------------------
                                                                                  

consensus_4042#0      CCGCTCACGACGCTGGTGGAGGTGCGCCAGCACGAAAAGAGCCCGGACCTCCGCCCGCTC 720
consensus_4042#1      ------------------------------------------------------------
                                                                                  

consensus_4042#0      CCGCTGCTGAAGCAGCCGAGCCCTGACCTCCGGCCGTTGCCGCCGCTGAAGCGGCCGGAA 780
consensus_4042#1      ------------------------------------------------------------
                                                                                  

consensus_4042#0      TCGCAACCCCCGCCTCCGCCACCGTCCACTCCGCCGTTGACCACCACGGGGTATTCCACC 840
consensus_4042#1      ------------------------------------------------------------
                                                                                  

consensus_4042#0      GACGAGGAGGACCAGGCCACGTACTACACCGCGCCGAAGACCGCCATGTCGTCGTTCAGC 900
consensus_4042#1      ------------------------------------------------------------
                                                                                  

consensus_4042#0      CGGAGCACGAGCCAGCACAGCACGCTGGAACAAACAGCCATGCCGCCCATGGCCGCGCCT 960
consensus_4042#1      ------------------------------------------------------------
                                                                                  

consensus_4042#0      GCACCGCCGCAAACCAATCCCCCACGACCTGTTCGTCCGCCACCGCCGCCGCCCCCGCCG 1020
consensus_4042#1      ------------------------------------------------------------
                                                                                  

consensus_4042#0      AGGCAGAGGCTGCTCCGGCCGCTCCCGGCAGAATCGCCGCCGCCCGCCGCGCTGGCCAAT 1080
consensus_4042#1      ------------------------------------------------------------
                                                                                  

consensus_4042#0      CTGGAACTAACCGGTTCCCCCGTCAAACCCGCTGTTGAAGACAGGGGGGGCGAGAATTCC 1140
consensus_4042#1      ------------------------------------------------------------
                                                                                  

consensus_4042#0      GGCGCCGCGCGGCCGCCCAAGCCGCCGCACCTGAAGCCGCTGCACTGGGACAAGCTCCGG 1200
consensus_4042#1      ------------------------------------------------------------
                                                                                  

consensus_4042#0      GCAATCTCCGGCCGCACCACCGTGTGGGATCAGGTCAAGAACTCCGACACATTCCGCGTC 1260
consensus_4042#1      ------------------------------------------------------------
                                                                                  

consensus_4042#0      GACGAGGAGGCGATGGAGAGCTTGTTCCTGAACAGCGGCGGCGGCGGCGCGGGGAGCTCG 1320
consensus_4042#1      ------------------------------------------------------------
                                                                                  

consensus_4042#0      GACCCGGCGGCGAGGAGGGGGGGATCCGGGAAGCAGGAGAGGCGGTTGCTTGACCCGAAG 1380
consensus_4042#1      ------------------------------------------------------------
                                                                                  

consensus_4042#0      CGGCTGCAGAACGTCGCGATCATGCTCAAATCGCTCAACGTGGCCGCCGACGAAGTGATT 1440
consensus_4042#1      ------------------------------------------------------------
                                                                                  

consensus_4042#0      GGTGCACTCGTGCGTGGAAATCCTGAAGATTTAGGATCTGAGTTCTATGAAACACTAGCT 1500
consensus_4042#1      ------------------------------------------------------------
                                                                                  

consensus_4042#0      AAGATGGCACCAACAAAAGAAGAAGAATTGAAACTAAAAGGTTATAGTGGCGATTTGTCA 1560
consensus_4042#1      ------------------------------------------------------------
                                                                                  

consensus_4042#0      AAAATTGATCCAGCAGAGCGCTTTCTGAAAGATGTACTTGGAGTTCCTTTTGCCTTCGAG 1620
consensus_4042#1      ------------------------------------------------------------
                                                                                  

consensus_4042#0      AGAGTGGATGCGATGCTGTACAGAGCAAATTTTGACAATGAAGTGAATTATTTAAGGAAA 1680
consensus_4042#1      ------------------------------------------------------------
                                                                                  

consensus_4042#0      TCTTTTGGAACATTGGAGGCAGCCTGTGAAGAGTTAAGAAGCAGCAAACTTTTTTTGAAG 1740
consensus_4042#1      ------------------------------------------------------------
                                                                                  

consensus_4042#0      CTGCTAGATGCAGTTCTAAAAACCGGGAACCGCATGAATGATGGAACCAATCGAGGCGAG 1800
consensus_4042#1      ------------------------------------------------------------
                                                                                  

consensus_4042#0      GCGAGGGCTTTCAAGCTTGATACTCTCCTAAAGCTTGCAGACATCAAGTCAACAGATGGT 1860
consensus_4042#1      ------------------------------------------------------------
                                                                                  

consensus_4042#0      AGAACGACATTGCTTCACTTCGTGGTTAAAGAGATCATCCGATCAGAAGGCTTCGATTCT 1920
consensus_4042#1      AGAACGACATTGCTTCACTTCGTGGTTAAAGAGATCATCCGATCAGAAGGCTTCGATTCT 60
                      ************************************************************

consensus_4042#0      GATCAGAGCGCGGTTAATCCTGGCAGCGGCAGCAAGGAACAGTTCAAAAGGGACGGCTTG 1980
consensus_4042#1      GATCAGAGCGCGGTTAATCCTGGCAGCGGCAGCAAGGAACAGTTCAAAAGGGACGGCTTG 120
                      ************************************************************

consensus_4042#0      AAATTACTTGCAGGGCTCAGCAGTGAGCTCTCCAACGTGAAGAGAGCGGCCACACTGGAG 2040
consensus_4042#1      AAATTACTTGCAGGGCTCAGCAGTGAGCTCTCCAACGTGAAGAGAGCGGCCACACTGGAG 180
                      ************************************************************

consensus_4042#0      ATGGACACACTGAGCGGCAACATCCTGAGGCTCGAAGCCGATCTCGAGAAGGTGAAGCTT 2100
consensus_4042#1      ATGGACACACTGAGCGGCAACATCCTGAGGCTCGAAGCCGATCTCGAGAAGGTGAAGCTT 240
                      ************************************************************

consensus_4042#0      GTCCTACAGCTCAAGGAGACTTGCTCAGATCAAGGCGCGAGCGAGAACTTCTTCCAGGCA 2160
consensus_4042#1      GTCCTACAGCTCAAGGAGACTTGCTCAGATCAAGGCGCGAGCGAGAACTTCTTCCAGGCA 300
                      ************************************************************

consensus_4042#0      ATGGTTGTCTTCCTCAGAAGAGCAGAGGCAGAGATCAAGGACATGAAAACCGCAGAGGAG 2220
consensus_4042#1      ATGGTTGTCTTCCTCAGAAGAGCAGAGGCAGAGATCAAGAACATGAAAACCGCAGAGGAG 360
                      *************************************** ********************

consensus_4042#0      AACGCGTTGCGCCTCGTGAAGGAGACGACGGAGTACTTCCATGGCGACGCCACCAAGGAG 2280
consensus_4042#1      ------------------------------------------------------------
                                                                                  

consensus_4042#0      GAGCCTCACCCTCTGAGGATATTCGTGGTGGTGGATGAATTCCTCCTGATACTGGACCGT 2340
consensus_4042#1      ---CCTCACCCTCTGAGGATATTCGTGGTGGTGGATGAATTCCTCCTGATACTGGACCGT 417
                         *********************************************************

consensus_4042#0      GTTTGCAGGGACGTCGGCAGGACGCCGGAGAGGGTGATGATGGGCTCCGGTAAGTCGTTC 2400
consensus_4042#1      GTTTGCAGGGACGTCGGCAGGACGCCGGAGAGGGTGATGATGGGCTCCGGTAAGTCGTTC 477
                      ************************************************************

consensus_4042#0      CGCGTCCCTGCAGGTACCTCATTGCCGCCTCATCGGAATGAGAACCGGCGAGTTCTTAGC 2460
consensus_4042#1      CGCGTCCCTGCAGGTACCTCATTGCCGCCTCATCGGAATGAGAACCGGCGAGTTCTTAGC 537
                      ************************************************************

consensus_4042#0      TCCTCCGATGAGGACAGCTCGTCATCTTAGGAGCAAACATTTTTGGTGCATAGGTTAGCT 2520
consensus_4042#1      TCCTCCGATGAGGACAGCTCGTCATCTTAGGAGCAAACATTTTTGGTGCATAGGTTAGCT 597
                      ************************************************************

consensus_4042#0      GATAAGATTTGAGAGTAGTGATTCTTCCGGAGCTGAACATTGTGGTGTATAGACTGTAAT 2580
consensus_4042#1      GATAAGATTTGAGAGTAGTGATTCTTCCGGAGCTGAACATTGTGGTGTATAGACTGTAAT 657
                      ************************************************************

consensus_4042#0      CACCGTCAGAAATAAGGGAGTCGTCACTGTCTGTCACTGTTAAAAGTAGATGTTTACCAA 2640
consensus_4042#1      CACCGTCAGAAATAAGGGAGTCGTCACTGTCTGTCACTGTTAAAAGTAGATGTTTACCAA 717
                      ************************************************************

consensus_4042#0      AGCTAAAGAAAGGTAGCTGTACAAACTACAAAGGCATTCAGTATTATGGTAGTATGTTCT 2700
consensus_4042#1      AGCTAAAGAAAGGTAGCTGTACAAACTACAAAGGCATTCAGTATTATGGTAGTA------ 771
                      ******************************************************      

consensus_4042#0      TACCATTCAGCTCAAATAGCATCTGTTTGAGAATTATCATATTAAGAGAAAATATATTTG 2760
consensus_4042#1      ------------------------------------------------------------
                                                                                  

consensus_4042#0      TTGGAA 2766
consensus_4042#1      ------