These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_4192#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1411 fasta sequence [GTCTGTACCTTTTACATGCAACCACACAACTCAGCTACAATACCATCAAGATGGCTATGATTTCCCAAGCATTTTTTCTCGCTATCATCTTCTTCATTCTTGTGCAGTTGCAAGCTTCTCCATCTCCTGCAATCCAAGCCTTGGTAGCTCCGATCACCAAGGACACCAAGACTGGGCTCCACACGCTCTCCATCTCCAACAAGAACTACCTGCTTGACCTCTCCGGACAGCTACTGTGGTCACCGTGCTCACCCTCCCACCCCACCGTCCCGTGCTCCTCCGGCGAGTGCGCCGCCGCGTCGGGGGCGCACAAGTCCTGCAACAACGGAGGACGCGCGTGCACCGCCCGCCCGACGAATCCGGTGACGGGCGAACGCGCCGTCGGCGACCTCACGCTCGCTGACATCGTCGCCAACGCCACCGACGGCAAGACGCTGACCTCCGAGGTCACCGTCCGGGGCGTCGTCTCGTCATGCGCGCCGGGCAGCCTCCTCAGGTCGTTACCGGCCATGGCGGCCGGCGACGCGGGCCTCGGCCGTGGCGGGGTGAGCCTGCCGACCCAGCTCTACTCGAAGCTGTCGCTTAAGCGGCAGTTCGCCGTCTGCCTGCCGAGCACGGCGGCCGCGCCCGGCGTCGCGTTCTTCGGCGGCGGGCCGTACAACCTGATGCCGCCGACGCTGTTCGACGCGAGCACCGTCCTCTCCTACACCGACCTGGCCCGGAGCCC-GACGAACCCCTCG-GCGTACAGCATCAAGCTCCGGGGCATCGCCATGAACCAA-GAGGCGGTCCACCTCCCTCCCGGCGCGCTCAGCCGCGGCGGCGGCGTGACGCTCGACACGGCCGCGCCGTACACCGTCCTGCGGCGCGACGTGTACCGCCCGTTCGTCGCC-GCGTTCGCCAAGGCGACGGCGAGGATACCGCGCATGCCGAGCGTGGCCCCGTTCGAGCTCTGCTTCAAC-AGCAGCGCGCTGGGG-TTCACCAGGGTCGGCTACGCGG--TGGCG--CCGA-TCGA--CCTCGTGACCTCCGGCGGCCGGAACTGGACGGTGTTCGGGTCGAACTCGCTGGCGCAGGTGGCGGGCGACACGGCGTGCTTGGCGTTCGTCGACGGCGGGAGGGCGGCGCGGAGCGCGGTGACCGTGGGCGCGTTCCAGATGGAGAACAACTTTTTGCTGTTCGACGAGGCCGCTTCCAGGCTAGGGTTCAGTGGCACCCTCTTCTTCATCAGGACTACCTGTGGCAACTTCAACTTCGCAAGAAACTAAAATGGGCTCACCGTTTGCCACTATAATTCAAATTTCAAAATAAGGATATAATTCTCGCTTTTTTTGTTGTCAACTTGTCGTGACCATTTGTAACTTTGAATAAGAGCTTGTATTGGTGAGACATTGGTCGCTTGAACTAAGATACAAGCATT] [+] EMBL AK121597 [GTCTGTACCTTTTACATGCAACCACACAACTCAGCTACAATACCATCAAGATGGCTATGATTTCCCAAGCATTTTTTCTCGCTATCATCTTCTTCATTCTTGTGCAGTTGCAAGCTTCTCCATCTCCTGCAATCCAAGCCTTGGTAGCTCCGATCACCAAGGACACCAAGACTGGGCTCCACACGCTCTCCATCTCCAACAAGAACTACCTGCTTGACCTCTCCGGACAGCTACTGTGGTCACCGTGCTCACCCTCCCACCCCACCGTCCCGTGCTCCTCCGGCGAGTGCGCCGCCGCGTCGGGGGCGCACAAGTCCTGCAACAACGGAGGACGCGCGTGCACCGCCCGCCCGACGAATCCGGTGACGGGCGAACGCGCCGTCGGCGACCTCACGCTCGCTGACATCGTCGCCAACGCCACCGACGGCAAGACGCTGACCTCCGAGGTCACCGTCCGGGGCGTCGTCTCGTCATGCGCGCCGGGCAGCCTCCTCAGGTCGTTACCGGCCATGGCGGCCGGCGACGCGGGCCTCGGCCGTGGCGGGGTGAGCCTGCCGACCCAGCTCTACTCGAAGCTGTCGCTTAAGCGGCAGTTCGCCGTCTGCCTGCCGAGCACGGCGGCCGCGCCCGGCGTCGCGTTCTTCGGCGGCGGGCCGTACAACCTGATGCCGCCGACGCTGTTCGACGCGAGCACCGTCCTCTCCTACACCGACCTGGCCCGGAGCCC GACGAACCCCTCG GCGTACAGCATCAAGCTCCGGGGCATCGCCATGAACCAA GAGGCGGTCCACCTCCCTCCCGGCGCGCTCAGCCGCGGCGGCGGCGTGACGCTCGACACGGCCGCGCCGTACACCGTCCTGCGGCGCGACGTGTACCGCCCGTTCGTCGCC GCGTTCGCCAAGGCGACGGCGAGGATAACGCGCATGCCGAGCGTGGCCCCGTTCGAGCTCTGCTTCAAC AGCAGCGCGCTGGGG TTCACCAGGGTCGGCTACGCGG TGGCG CCGA TCGA CCTCGTGACGTCCGGCGGCCGGAACTGGACGGTGTTCGGGTCGAACTCGCTGGCGCAGGTGGCGGGCGACACGGCGTGCTTGGCGTTCGTCGACGGCGGGAGGGCGGCGCGGAGCGCGGTGACCGTGGGCGCGTTCCAGATGGAGAACAACTTTTTGCTGTTCGACGAGGCCGCTTCCAGGCTAGGGTTCAGTGGCACCCTCTTCTTCATCAGGACTACCTGTGGCAACTTCAACTTCGCAAGAAACTAAAATGGGCTCACCGTTTGCCACTATAATTCAAATTTCAAAATAAGGATATAATTCTCGCTTTTTTTGTTGTCAACTTGTCGTGACCATTTGTAACTTTGAATAAGAGCTTGTATTGGTGAGACATTGGTCGCTTGAACTAAGATACAAGCATT] [+] EMBL CB966000 [ atagcttGCGG TGCGCCCGGAGTTGCGTTCTTCGGCGGCGGG CGTACAACCTGATGCCGCCGACGCTGTTCGACGCGAGCACCGTCCTCTCCTACACCGACCTGGCCCGGAGCCCTGACGAACCCCTCGTGCGTACAGCATCAAGCTCCGGGGCATCGCCATGAACCAATGAGGCGGTCCACCTCCCTCCCGGCGCGCTCAGCCGCGGCGGCGGCGTGACGCTCGACACGGCCGCGCCGTACACCGTCCTGCGGCGCGACGTGTACCGCCCGTTCGTCGCCTGCGTTCGCCAAGGCGACGGCGAGGATACCGCGCATGCCGAGCGTGGACCCGTTCGAGCTCTGCTTCAACAAGCAGCGCGCTGGGGCTTCACCAGGGTCGGCCACCCCGCAAGGCGCCCCGACTCGACCCCTCCCGACCCCCGccccccc ] [+] EMBL CB966827 [ CGCG TCTTCGGCGGCGGGCCGTACAACCTGATGCCGCCGACGCTGTTCGACGCGAGCACCGTCCTCTCCTACACCGACCTGGCCCGGAGCCC GACGAACCCCTCG GCGTACAGCATCAAGCTCCGGGGCATCGCCATGAACCAA GAGGCGGTCCACCTCCCTCCCGGCGCGCTCAGCCGCGGCGGCGGCGTGACGCTCGACACGGCCGCGCCGTACACCGTCCTGCGGCGCGACGTGTACCGCCCGTTCGTCGCC GCGTTCGCCAAGGCGACGGCGAGGATACCGCGCATGCCGAGCGTGGCCCCGTTCGAGCTCTGCTTCAAC AGCAGCGCGCTGGGG TTCACCAGGGTCGGCTACGCGG TGGCG CCGA TCGA CCTCGTGACCTCCGGCGGCCGGAACTGGACGGTGTTCGGGTCGAACTCGCTGGCGCAGGTGGCGAGCGACACGGCGTGCTTGGCGTTCGTCGACGGCGGGAGGGCGGCGCGGAGCGCGGTGACCGTGGGCGCGTTCCAGATGGAGAACAACTTTTTGCTGTTCGACGAGGCCGCGTCAAGGCTAGGGTTCAGTGGCACCCTCTTCTTCATCAGGACTACCTGTGGCAACTTCAACTTCGCAAGAAACTACAATGGGCTCACCGTCTGGCACTATAATTACAATTTCAAAATCAGGATAT ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||