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Oryza sativa
cluster # 457 cluster # 457       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_457#0 length = 1710 sequences # 2  

consensusID : consensus_457#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1710
fasta sequence
                              [GCTGCGTTCCCTGCACGACCCCAACTACGTTCTTGGCTTCGTCGACCGCCTCGAAAGCGAGTGCCTCTTGTTGCAAGGCACTAGGAGCACAAGAGTGGCATCAGCCCTGAGCAGGGCACAACTTCAGGATGGTTATGTTGCATACCCATGGGAGAAGAAGATGCGTGACTCGTTGCGCATGCCCAACTCCAGCAGCTACCTCTCGATGCTCGTCCTCCCCAAAGCTCTGGACCTGAATTCATGTCGATACGAGTCCTTTGAGGACACCCTTGCCCGTGCCAACGCGTGGATCTACTCCTCGCAGGTCTCAGGAATCCCCATCGAGTTCATGAATGTGCAGAGTGAGGCTCTTCTCACCAAGATATCTGGAGAGACAGCGTCTGCAACTGTTAACTCAGGTTCTTTGTCTGATCTGTCTAACGTCACGAATGCGACCCTGTATGGTTTTGAGGATTACCATGGGGTAGATATTGGGGTGGTGAAAGCAGCCCGACTTTGGTACAGCTCCATAGCAGAAGAGATGCCGCTGGAGATTCCACAAGAAGGTGACACGAGGCTAGGATTCGCCATCGGCCGTACTGAAGAGGGTTTTATCTTCATATCTTCAGTGGTTGACAATGACAAGGACAATGAGGCGCCATCGACACGGTCAGGGCTCCGCGATCTGTTCAACCAGGCAAGGGAGGCATCAAAACTGCTAGTTATCTCAAGGGTGTCCAATGAGAAGGTCCTTCCCTGGATGATCTCCAGCTCAGGAGCGGTCCGCTGCTTCGACACCATCTCCCTCAGCCAAAAGCTTTCCTTGCACCGCCTTGCGGTGCGCCCCATCCAGCTCCACCTGCTCATGTGGGAGAAACCTAGTGGTCCTGTAGAAAGGATCATTCGCTCTCCGAAACTTCCCCCACAATCTGAGCTACCTCAAGTACCCTGGAATCTAATTGAGAGCATTGAACCTAGAGTAGATGTTGATGAGGACTATGTGGGGGATTTGTCATTTCGGATTGATGATCTTTCAGTGGGAACCAGCTGGGTGTGATCCTTTCATGCTGCAAGCTTCTAATGTGCATATGTATGTCTTCATTTACATAGTTCTCTTGGGCAGTATGCTCAGTTTTGTTCCATTTAAGTGTAGAAGCCTGGCTAGAAATGTCCAGAGCCTTACTAGGTTTCTGGATATACCAAGGGCGAGGCTTTCATAACATCTGAAACATTATGTTGTGATGCAATGTTTTTGTTGATCATAGCATACCATTGGAGGAATACATAAGCATTTCAATAATTATCTAAGGATTATCCCAATTATGGGCCTGTTAAGTTACTCCCAAACATATTGTTCAACACTGACATTTCTGTACTTTGTACTGAACATAAAGTTTGTTACACTTAAACCACACAAGCTATTGGTCAATGAGAGCTAAGCCATGAATCTCAATTATGCTACTTATCAAGTTGTGAGCACTCTACACTTGAGCACTCGATATTGGACATAGAACCCCGGCATTACCATGATCTTTACCTGACAAGGATTGTGCAGCTGCTGCTTGTCAGGTAGGATGTCCTCCATGTACATCTGATCGAATACGCGGCTCTCTTCGACCCGCATGATCGTCAGCNCGGGGGTGAAGGAGAAGGCCAGGAGGTGGAGCAGCCAGACGCACTTGGCAGCGACGAAGAAGCACTGCAGCAGCTGCTCCGGCCATGGCCGGGACC]

[+] EMBL AK062303             [GCTGCGTTCCCTGCACGACCCCAACTACGTTCTTGGCTTCGTCGACCGCCTCGAAAGCGAGTGCCTCTTGTTGCAAGGCACTAGGAGCACAAGAGTGGCATCAGCCCTGAGCAGGGCACAACTTCAGGATGGTTATGTTGCATACCCATGGGAGAAGAAGATGCGTGACTCGTTGCGCATGCCCAACTCCAGCAGCTACCTCTCGATGCTCGTCCTCCCCAAAGCTCTGGACCTGAATTCATGTCGATACGAGTCCTTTGAGGACACCCTTGCCCGTGCCAACGCGTGGATCTACTCCTCGCAGGTCTCAGGAATCCCCATCGAGTTCATGAATGTGCAGAGTGAGGCTCTTCTCACCAAGATATCTGGAGAGACAGCGTCTGCAACTGTTAACTCAGGTTCTTTGTCTGATCTGTCTAACGTCACGAATGCGACCCTGTATGGTTTTGAGGATTACCATGGGGTAGATATTGGGGTGGTGAAAGCAGCCCGACTTTGGTACAGCTCCATAGCAGAAGAGATGCCGCTGGAGATTCCACAAGAAGGTGACACGAGGCTAGGATTCGCCATCGGCCGTACTGAAGAGGGTTTTATCTTCATATCTTCAGTGGTTGACAATGACAAGGACAATGAGGCGCCATCGACACGGTCAGGGCTCCGCGATCTGTTCAACCAGGCAAGGGAGGCATCAAAACTGCTAGTTATCTCAAGGGTGTCCAATGAGAAGGTCCTTCCCTGGATGATCTCCAGCTCAGGAGCGGTCCGCTGCTTCGACACCATCTCCCTCAGCCAAAAGCTTTCCTTGCACCGCCTTGCGGTGCGCCCCATCCAGCTCCACCTGCTCATGTGGGAGAAACCTAGTGGTCCTGTAGAAAGGATCATTCGCTCTCCGAAACTTCCCCCACAATCTGAGCTACCTCAAGTACCCTGGAATCTAATTGAGAGCATTGAACCTAGAGTAGATGTTGATGAGGACTATGTGGGGGATTTGTCATTTCGGATTGATGATCTTTCAGTGGGAACCAGCTGGGTGTGATCCTTTCATGCTGCAAGCTTCTAATGTGCATATGTATGTCTTCATTTACATAGTTCTCTTGGGCAGTATGCTCAGTTTTGTTCCATTTAAGTGTAGAAGCCTGGCTAGAAATGTCCAGAGCCTTACTAGGTTTCTGGATATACCAAGGGCGAGGCTTTCATAACATCTGAAACATTATGTTGTGATGCAATGTTTTTGTTGATCATAGCATACCATTGGAGGAATACATAAGCATTTCAATAATTATCTAAGGATTATCCCAATTATGGGCCTGTTAAGTTACTCCCAAACATATTGTTCAACACTGACATTTCTGTACTTTGTACTGAACATAAAGTT                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL C96889               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                tttTTACTCCCAAACATATTGTTCAACACTGACATTTCTGTACTTTGTACTGAACATAAAGTTTGTTACACTTAAACCACACAAGCTATTGGTCAATGAGAGCTAAGCCATGAATCTCAATTATGCTACTTATCAAGTTGTGAGCACTCTACACTTGAGCACTCGATATTGGACATAGAACCCCGGCATTACCATGATCTTTACCTGACAAGGATTGTGCAGCTGCTGCTTGTCAGGTAGGATGTCCTCCATGTACATCTGATCGAATACGCGGCTCTCTTCGACCCGCATGATCGTCAGCNCGGGGGTGAAGGAGAAGGCCAGGAGGTGGAGCAGCCAGACGCACTTGGCAGCGACGAAGAAGCACTGCAGCAGCTGCTCCGGCCATGGCCGGGACC]


>consensus_457#0 GCTGCGTTCCCTGCACGACCCCAACTACGTTCTTGGCTTCGTCGACCGCCTCGAAAGCGA GTGCCTCTTGTTGCAAGGCACTAGGAGCACAAGAGTGGCATCAGCCCTGAGCAGGGCACA ACTTCAGGATGGTTATGTTGCATACCCATGGGAGAAGAAGATGCGTGACTCGTTGCGCAT GCCCAACTCCAGCAGCTACCTCTCGATGCTCGTCCTCCCCAAAGCTCTGGACCTGAATTC ATGTCGATACGAGTCCTTTGAGGACACCCTTGCCCGTGCCAACGCGTGGATCTACTCCTC GCAGGTCTCAGGAATCCCCATCGAGTTCATGAATGTGCAGAGTGAGGCTCTTCTCACCAA GATATCTGGAGAGACAGCGTCTGCAACTGTTAACTCAGGTTCTTTGTCTGATCTGTCTAA CGTCACGAATGCGACCCTGTATGGTTTTGAGGATTACCATGGGGTAGATATTGGGGTGGT GAAAGCAGCCCGACTTTGGTACAGCTCCATAGCAGAAGAGATGCCGCTGGAGATTCCACA AGAAGGTGACACGAGGCTAGGATTCGCCATCGGCCGTACTGAAGAGGGTTTTATCTTCAT ATCTTCAGTGGTTGACAATGACAAGGACAATGAGGCGCCATCGACACGGTCAGGGCTCCG CGATCTGTTCAACCAGGCAAGGGAGGCATCAAAACTGCTAGTTATCTCAAGGGTGTCCAA TGAGAAGGTCCTTCCCTGGATGATCTCCAGCTCAGGAGCGGTCCGCTGCTTCGACACCAT CTCCCTCAGCCAAAAGCTTTCCTTGCACCGCCTTGCGGTGCGCCCCATCCAGCTCCACCT GCTCATGTGGGAGAAACCTAGTGGTCCTGTAGAAAGGATCATTCGCTCTCCGAAACTTCC CCCACAATCTGAGCTACCTCAAGTACCCTGGAATCTAATTGAGAGCATTGAACCTAGAGT AGATGTTGATGAGGACTATGTGGGGGATTTGTCATTTCGGATTGATGATCTTTCAGTGGG AACCAGCTGGGTGTGATCCTTTCATGCTGCAAGCTTCTAATGTGCATATGTATGTCTTCA TTTACATAGTTCTCTTGGGCAGTATGCTCAGTTTTGTTCCATTTAAGTGTAGAAGCCTGG CTAGAAATGTCCAGAGCCTTACTAGGTTTCTGGATATACCAAGGGCGAGGCTTTCATAAC ATCTGAAACATTATGTTGTGATGCAATGTTTTTGTTGATCATAGCATACCATTGGAGGAA TACATAAGCATTTCAATAATTATCTAAGGATTATCCCAATTATGGGCCTGTTAAGTTACT CCCAAACATATTGTTCAACACTGACATTTCTGTACTTTGTACTGAACATAAAGTTTGTTA CACTTAAACCACACAAGCTATTGGTCAATGAGAGCTAAGCCATGAATCTCAATTATGCTA CTTATCAAGTTGTGAGCACTCTACACTTGAGCACTCGATATTGGACATAGAACCCCGGCA TTACCATGATCTTTACCTGACAAGGATTGTGCAGCTGCTGCTTGTCAGGTAGGATGTCCT CCATGTACATCTGATCGAATACGCGGCTCTCTTCGACCCGCATGATCGTCAGCNCGGGGG TGAAGGAGAAGGCCAGGAGGTGGAGCAGCCAGACGCACTTGGCAGCGACGAAGAAGCACT GCAGCAGCTGCTCCGGCCATGGCCGGGACC



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)