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Oryza sativa
cluster # 4600 cluster # 4600       Sequences # 3       consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4600#0 length = 3654 sequences # 2  
 consensus_4600#1 length = 317 sequences # 1  
consensusID : consensus_4600#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 3654
fasta sequence 
                              [ATCTCAGTGTCCATCGGCCATCGCCTCCTTTTCTCTCTCCTCTCCTCTCACCATCTTCTCCTACAGCAAATCACTCTTCTCTCTCTCTAAAAAACTTCACAAGCCTACTAGCCTACTACTAGGCACGTAGCTAGCCCCTGCCACTCTATCGCCCAGCACAAGCCATACAGCTACCCGCTGTCACTGCGCCAGCGGCCGCAGCTGCGCAAAGAGGAGCGCGAGAACCCAAGAAACCAACCAAGAGCTGCGTCCCATAAAGGCGCGCTGCTTCAATCCATCCATCTTCTGATCTTCCATATACTTCGCTTCCTGTAAATGTCATCGCCGCCCCGGCGGTGCCTCGCAGCGGAGCAGCAGTGGCCATGACGCCGGCGCCGGCGGCCGCCTCCTACCGCGCTCTCGTCGCGCTCCTGCTCGTCGCCGTCGCCGTTGCCGATGATGGGTCGACGCTGCTGGAGATCAAGAAGTCCTTCCGCAATGTGGACAACGTACTGTACGATTGGGCCGGCGGCGACTACTGCTCGTGGCGCGGCGTCCTCTGCGACAACGTCACCTTCGCCGTCGCCGCGCTCAACCTATCCGGGCTCAACCTCGGAGGCGAGATCTCTCCGGCCGTCGGCAGGTTGAAGGGCATCGTCTCGATTGACTTGAAGTCGAATGGGCTGTCTGGGCAGATCCCTGATGAGATTGGCGATTGTTCATCACTAAAAACTCTGGATTTGTCTTTCAATAGCTTGGATGGGGACATTCCGTTCTCAGTATCGAAGCTGAAGCACATTGAGAGCTTGATATTGAAGAACAACCAACTGATCGGAGTGATCCCATCAACGCTCTCACAGCTCCCAAATTTGAAGATTTTGGACTTGGCACAGAACAAACTGAGTGGAGAGATACCAAGACTGATATATTGGAACGAGGTTCTTCAATACTTGGGATTACGCGGTAATAATTTAGAAGGCAGCATCTCCCCAGATATATGCCAGTTGACTGGGCTTTGGTACTTTGACGTAAAGAACAACAGCTTGACTGGGCCGATACCAGAAACCATTGGGAACTGTACAAGTTTTCAGGTCTTGGATTTGTCTTACAATAAACTTTCTGGATCAATTCCTTTCAACATTGGTTTCCTACAAGTTGCTACACTATCTTTGCAAGGGAACATGTTTACTGGTCCTATTCCATCAGTTATTGGACTTATGCAGGCTCTCGCTGTACTGGATCTGAGTTACAACCAATTGTCTGGTCCTATTCCATCGATACTAGGCAATTTAACATACACTGAGAAGCTGTATATGCAAGGCAATAAGTTAACAGGTCCAATACCACCTGAGCTTGGAAATATGTCAACCCTTCATTACTTAGAACTTAACGATAATCAACTTAGCGGGTTCATTCCTCCAGAGTTCGGAAAGCTAACAGGGTTATTTGACTTAAACCTTGCAAACAACAACTTTGAAGGTCCAATCCCTGATAACATAAGCTCATGTGTGAATCTCAATAGCTTCAATGCTTATGGCAACAGATTAAATGGGACCATTCCTCCTTCATTGCATAAACTTGAGAGCATGACTTATTTGAATTTGTCATCAAATTTTCTAAGTGGTTCTATTCCTATTGAGCTATCGAGAATCAACAATTTGGACACCTTGGATTTATCCTGTAACATGATTACTGGCCCAATTCCATCAACCATTGGGAGTTTGGAGCATCTATTAAGACTTAACTTGAGCAACAATGGTCTAGTAGGATTCATTCCTGCAGAAATTGGCAACTTGAGGAGTATCATGGAGATTGATATGTCCAACAATCATCTTGGCGGTTTGATTCCTCAAGAACTCGGAATGCTGCAAAATCTGATGTTGTTAAATCTCAAAAACAACAACATAACTGGGGATGTCTCTTCACTGATGAACTGCTTCAGCCTCAATATCTTAAATGTATCCTATAATAATTTGGCTGGTGTTGTACCTACTGATAACAACTTCTCACGGTTTTCGCCTGACAGCTTTTTGGGTAATCCAGGACTTTGTGGATATTGGCTTGGTTCTTCGTGCCGTTCATCTGGCCATCAACAGAAACCACTAATCTCAAAGGCTGCAATACTTGGAATTGCCGTGGGTGGGCTTGTTATCCTCCTGATGATCTTAGTAGCGGTCTGCAGGCCTCATAGTCCACCTGTTTTCAAAGATGTCTCTGTTAGCAAACCAGTGAGCAATGTTCCCCCCAAGCTGGTTATCCTTCATATGAACCTTTCCCTTCTTGTATACGAGGATATAATGACGATGACTGAAAACCTGAGTGAGAAGTACATCATTGGGTACGGAGCATCCAGCACGGTTATAAATGTGTTTCGAAGAACCGCAAACCAGTGGCAGTAAAAAAGCTATATGCCCACTATCCACAGAGCTTCAAGGAATTTGAAACTGAGCTTGAGACTGTTGGTAGCATCAAACACCGGAATCTAGTCAGTCTTCAAGGATATTCCCTATCTCCTGTTGGAAATCTTCTCTTCTACGATTACATGGAAAATGGAAGCCTCTGGGATGTTTTGCATGAAGGTCCAACTAAGAAGAAAAAACTTGATTGGGAAACTCGTCTACGAATTGCTCTAGGTGCGGCCCAAGGCCTTGCTTATCTTCATCATGACTGTAGCCCACGGATAATACACAGGGATGTGAAATCAAAAAATATACTCCTTGATAAAGATTATGAGGCACATCTTACAGACTTTGGCATTGCTAAGAGTTTGTGTGTTTCAAAAACTCACACGTCCACCTATGTCATGGGAACTATTGGCTATATCGATCCTGAGTATGCTCGCACCTCCCGTCTCAATGAAAAGTCTGATGTCTACAGCTATGGCATTGTTCTGCTTGAGCTGCTGACCGGAAAAAAGCCAGTGGACAACGAGTGCAATCTCCATCACTTGATCTTGTCAAAGACGGCTAACAATGCTGTCATGGAGACAGTCGACCCGGACATTGCAGACACTTGCAAGGATCTTGGTGAGGTCAAGAAGGTGTTCCAGCTGGCGCTCCTTTGCACCAAGAGACAACCATCGGATCGGCCGACAATGCACGAGGTTGTGCGCGTCCTGGACTGCCTAGTTCGTCCCGACCCGCCACCGAAGTCCGCACAGCAGCTGGCCATGCCGCAGCGGCCTGCTGTCCCGAGCTACATCAACGAGTATGTCAGCTTAAGAGGCACCAGCGTGCTCTCCTGCGCCAACTCGTCGTGTACTTCCGATGCTGAGCTGTTTCTCAAGTTTGGCGAGGTCATTTCTCAGAACACAGAGTAGAATAGTCTGCAGAAATCGTCATCCGATCTTGGGATTCAGGCAAGCAGCTGGTGAAGCTAATCAAGGTAGTGAAGTGAACTCACGTTTTGTGACTTTGTCCACATGTTGGGTGCCCAGAAAATTAACAAGAGAATTCTCAAGGGTTGTGGCTGGTGTTCTTTACTGTAAAAAAAATGCGTCCTACTTCTTTCTTCTTCCTTTTTTTTTATCTCGTTTTTGTCTAACTTAGGAGGTGTCCATGAATCTAGTACTAAATCTCAAGACAGCTTCTTCTGTTCTGTAACATTTCTGGGATTGGAATGCTGGAACTGGTATTACTAATAGTCTCTCGGTTTGGACAAATTCGCAGGGTGGTG]

[+] EMBL AK073793             [ATCTCAGTGTCCATCGGCCATCGCCTCCTTTTCTCTCTCCTCTCCTCTCACCATCTTCTCCTACAGCAAATCACTCTTCTCTCTCTCTAAAAAACTTCACAAGCCTACTAGCCTACTACTAGGCACGTAGCTAGCCCCTGCCACTCTATCGCCCAGCACAAGCCATACAGCTACCCGCTGTCACTGCGCCAGCGGCCGCAGCTGCGCAAAGAGGAGCGCGAGAACCCAAGAAACCAACCAAGAGCTGCGTCCCATAAAGGCGCGCTGCTTCAATCCATCCATCTTCTGATCTTCCATATACTTCGCTTCCTGTAAATGTCATCGCCGCCCCGGCGGTGCCTCGCAGCGGAGCAGCAGTGGCCATGACGCCGGCGCCGGCGGCCGCCTCCTACCGCGCTCTCGTCGCGCTCCTGCTCGTCGCCGTCGCCGTTGCCGATGATGGGTCGACGCTGCTGGAGATCAAGAAGTCCTTCCGCAATGTGGACAACGTACTGTACGATTGGGCCGGCGGCGACTACTGCTCGTGGCGCGGCGTCCTCTGCGACAACGTCACCTTCGCCGTCGCCGCGCTCAACCTATCCGGGCTCAACCTCGGAGGCGAGATCTCTCCGGCCGTCGGCAGGTTGAAGGGCATCGTCTCGATTGACTTGAAGTCGAATGGGCTGTCTGGGCAGATCCCTGATGAGATTGGCGATTGTTCATCACTAAAAACTCTGGATTTGTCTTTCAATAGCTTGGATGGGGACATTCCGTTCTCAGTATCGAAGCTGAAGCACATTGAGAGCTTGATATTGAAGAACAACCAACTGATCGGAGTGATCCCATCAACGCTCTCACAGCTCCCAAATTTGAAGATTTTGGACTTGGCACAGAACAAACTGAGTGGAGAGATACCAAGACTGATATATTGGAACGAGGTTCTTCAATACTTGGGATTACGCGGTAATAATTTAGAAGGCAGCATCTCCCCAGATATATGCCAGTTGACTGGGCTTTGGTACTTTGACGTAAAGAACAACAGCTTGACTGGGCCGATACCAGAAACCATTGGGAACTGTACAAGTTTTCAGGTCTTGGATTTGTCTTACAATAAACTTTCTGGATCAATTCCTTTCAACATTGGTTTCCTACAAGTTGCTACACTATCTTTGCAAGGGAACATGTTTACTGGTCCTATTCCATCAGTTATTGGACTTATGCAGGCTCTCGCTGTACTGGATCTGAGTTACAACCAATTGTCTGGTCCTATTCCATCGATACTAGGCAATTTAACATACACTGAGAAGCTGTATATGCAAGGCAATAAGTTAACAGGTCCAATACCACCTGAGCTTGGAAATATGTCAACCCTTCATTACTTAGAACTTAACGATAATCAACTTAGCGGGTTCATTCCTCCAGAGTTCGGAAAGCTAACAGGGTTATTTGACTTAAACCTTGCAAACAACAACTTTGAAGGTCCAATCCCTGATAACATAAGCTCATGTGTGAATCTCAATAGCTTCAATGCTTATGGCAACAGATTAAATGGGACCATTCCTCCTTCATTGCATAAACTTGAGAGCATGACTTATTTGAATTTGTCATCAAATTTTCTAAGTGGTTCTATTCCTATTGAGCTATCGAGAATCAACAATTTGGACACCTTGGATTTATCCTGTAACATGATTACTGGCCCAATTCCATCAACCATTGGGAGTTTGGAGCATCTATTAAGACTTAACTTGAGCAACAATGGTCTAGTAGGATTCATTCCTGCAGAAATTGGCAACTTGAGGAGTATCATGGAGATTGATATGTCCAACAATCATCTTGGCGGTTTGATTCCTCAAGAACTCGGAATGCTGCAAAATCTGATGTTGTTAAATCTCAAAAACAACAACATAACTGGGGATGTCTCTTCACTGATGAACTGCTTCAGCCTCAATATCTTAAATGTATCCTATAATAATTTGGCTGGTGTTGTACCTACTGATAACAACTTCTCACGGTTTTCGCCTGACAGCTTTTTGGGTAATCCAGGACTTTGTGGATATTGGCTTGGTTCTTCGTGCCGTTCATCTGGCCATCAACAGAAACCACTAATCTCAAAGGCTGCAATACTTGGAATTGCCGTGGGTGGGCTTGTTATCCTCCTGATGATCTTAGTAGCGGTCTGCAGGCCTCATAGTCCACCTGTTTTCAAAGATGTCTCTGTTAGCAAACCAGTGAGCAATGTTCCCCCCAAGCTGGTTATCCTTCATATGAACCTTTCCCTTCTTGTATACGAGGATATAATGACGATGACTGAAAACCTGAGTGAGAAGTACATCATTGGGTACGGAGCATCCAGCACGGTTATAAATGTGTTTCGAAGAACCGCAAACCAGTGGCAGTAAAAAAGCTATATGCCCACTATCCACAGAGCTTCAAGGAATTTGAAACTGAGCTTGAGACTGTTGGTAGCATCAAACACCGGAATCTAGTCAGTCTTCAAGGATATTCCCTATCTCCTGTTGGAAATCTTCTCTTCTACGATTACATGGAAAATGGAAGCCTCTGGGATGTTTTGCATGAAGGTCCAACTAAGAAGAAAAAACTTGATTGGGAAACTCGTCTACGAATTGCTCTAGGTGCGGCCCAAGGCCTTGCTTATCTTCATCATGACTGTAGCCCACGGATAATACACAGGGATGTGAAATCAAAAAATATACTCCTTGATAAAGATTATGAGGCACATCTTACAGACTTTGGCATTGCTAAGAGTTTGTGTGTTTCAAAAACTCACACGTCCACCTATGTCATGGGAACTATTGGCTATATCGATCCTGAGTATGCTCGCACCTCCCGTCTCAATGAAAAGTCTGATGTCTACAGCTATGGCATTGTTCTGCTTGAGCTGCTGACCGGAAAAAAGCCAGTGGACAACGAGTGCAATCTCCATCACTTGATCTTGTCAAAGACGGCTAACAATGCTGTCATGGAGACAGTCGACCCGGACATTGCAGACACTTGCAAGGATCTTGGTGAGGTCAAGAAGGTGTTCCAGCTGGCGCTCCTTTGCACCAAGAGACAACCATCGGATCGGCCGACAATGCACGAGGTTGTGCGCGTCCTGGACTGCCTAGTTCGTCCCGACCCGCCACCGAAGTCCGCACAGCAGCTGGCCATGCCGCAGCGGCCTGCTGTCCCGAGCTACATCAACGAGTATGTCAGCTTAAGAGGCACCAGCGTGCTCTCCTGCGCCAACTCGTCGTGTACTTCCGATGCTGAGCTGTTTCTCAAGTTTGGCGAGGTCATTTCTCAGAACACAGAGTAGAATAGTCTGCAGAAATCGTCATCCGATCTTGGGATTCAGGCAAGCAGCTGGTGAAGCTAATCAAGGTAGTGAAGTGAACTCACGTTTTGTGACTTTGTCCACATGTTGGGTGCCCAGAAAATTAACAAGAGAATTCTCAAGGGTTGTGGCTGGTGTTCTTTACTGTAAAAAAAATGCGTCCTACTTCTTTCTTCTTCCTTTTTTTTTATCTCGTTTTTGTCTAACTTAGGAGGTGTCCATGAATCTAGTACTAAATCTCAAGACAGCTTCTTCTGTTCTGTAACATTTCTGGGATTGGAATGCTGGAACTGGTATTACTAATAGTCTCTCGGTTTGGACAAATTCGCAGGGTGGTG]
[+] EMBL CB000886             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      AAGAGACAACCATCGGATCGGCCGACAATGCACGAGGTTGTGCGCGTCCTGGACTGCCTAGTTCGTCCCGACCCGCCACCGAAGTCCGCGCAGCAGCTGGCCATGCCGCAGCGGCCTGCTGTCCCGAGCTACATCAACGAGTATGTCAGCTTAAGAGGCACCAGCGTGCTCTCCTGCGCCAACTCGTCGTGTACTTCCGATGCTGAGCTGTTTCTCAAGTTTGGCGAGGTCATTTCTCAGAACACAGAGTAGAATAGTCTGCAGAAATCGTCATCCGATCTTGGGATTCAGGCAAGCAGCTGGTGAAGCTAATCAAGGTAGTGAAGTGAACTCACGTTTTGTGACTTTGTCCACATGTTGGGTGCCCAGAAAATTAACAAGAGAATTCTCAAGGGTTGTGGCTGGTGTTCTTTACTGTAAAAAAAATGCGTCCTACTTCTTTCTTCTTCCTTTTTTTTTATCTCGTTTTTGTCTAACTTAGGAGGTGTCCATGAATCTAGTACTAAATCTCAAGACAGCTTCTTCTGTTCTGTAACATTTCTGGGATTGGAATGCTGGAA                                                ]




>consensus_4600#0
ATCTCAGTGTCCATCGGCCATCGCCTCCTTTTCTCTCTCCTCTCCTCTCACCATCTTCTC
CTACAGCAAATCACTCTTCTCTCTCTCTAAAAAACTTCACAAGCCTACTAGCCTACTACT
AGGCACGTAGCTAGCCCCTGCCACTCTATCGCCCAGCACAAGCCATACAGCTACCCGCTG
TCACTGCGCCAGCGGCCGCAGCTGCGCAAAGAGGAGCGCGAGAACCCAAGAAACCAACCA
AGAGCTGCGTCCCATAAAGGCGCGCTGCTTCAATCCATCCATCTTCTGATCTTCCATATA
CTTCGCTTCCTGTAAATGTCATCGCCGCCCCGGCGGTGCCTCGCAGCGGAGCAGCAGTGG
CCATGACGCCGGCGCCGGCGGCCGCCTCCTACCGCGCTCTCGTCGCGCTCCTGCTCGTCG
CCGTCGCCGTTGCCGATGATGGGTCGACGCTGCTGGAGATCAAGAAGTCCTTCCGCAATG
TGGACAACGTACTGTACGATTGGGCCGGCGGCGACTACTGCTCGTGGCGCGGCGTCCTCT
GCGACAACGTCACCTTCGCCGTCGCCGCGCTCAACCTATCCGGGCTCAACCTCGGAGGCG
AGATCTCTCCGGCCGTCGGCAGGTTGAAGGGCATCGTCTCGATTGACTTGAAGTCGAATG
GGCTGTCTGGGCAGATCCCTGATGAGATTGGCGATTGTTCATCACTAAAAACTCTGGATT
TGTCTTTCAATAGCTTGGATGGGGACATTCCGTTCTCAGTATCGAAGCTGAAGCACATTG
AGAGCTTGATATTGAAGAACAACCAACTGATCGGAGTGATCCCATCAACGCTCTCACAGC
TCCCAAATTTGAAGATTTTGGACTTGGCACAGAACAAACTGAGTGGAGAGATACCAAGAC
TGATATATTGGAACGAGGTTCTTCAATACTTGGGATTACGCGGTAATAATTTAGAAGGCA
GCATCTCCCCAGATATATGCCAGTTGACTGGGCTTTGGTACTTTGACGTAAAGAACAACA
GCTTGACTGGGCCGATACCAGAAACCATTGGGAACTGTACAAGTTTTCAGGTCTTGGATT
TGTCTTACAATAAACTTTCTGGATCAATTCCTTTCAACATTGGTTTCCTACAAGTTGCTA
CACTATCTTTGCAAGGGAACATGTTTACTGGTCCTATTCCATCAGTTATTGGACTTATGC
AGGCTCTCGCTGTACTGGATCTGAGTTACAACCAATTGTCTGGTCCTATTCCATCGATAC
TAGGCAATTTAACATACACTGAGAAGCTGTATATGCAAGGCAATAAGTTAACAGGTCCAA
TACCACCTGAGCTTGGAAATATGTCAACCCTTCATTACTTAGAACTTAACGATAATCAAC
TTAGCGGGTTCATTCCTCCAGAGTTCGGAAAGCTAACAGGGTTATTTGACTTAAACCTTG
CAAACAACAACTTTGAAGGTCCAATCCCTGATAACATAAGCTCATGTGTGAATCTCAATA
GCTTCAATGCTTATGGCAACAGATTAAATGGGACCATTCCTCCTTCATTGCATAAACTTG
AGAGCATGACTTATTTGAATTTGTCATCAAATTTTCTAAGTGGTTCTATTCCTATTGAGC
TATCGAGAATCAACAATTTGGACACCTTGGATTTATCCTGTAACATGATTACTGGCCCAA
TTCCATCAACCATTGGGAGTTTGGAGCATCTATTAAGACTTAACTTGAGCAACAATGGTC
TAGTAGGATTCATTCCTGCAGAAATTGGCAACTTGAGGAGTATCATGGAGATTGATATGT
CCAACAATCATCTTGGCGGTTTGATTCCTCAAGAACTCGGAATGCTGCAAAATCTGATGT
TGTTAAATCTCAAAAACAACAACATAACTGGGGATGTCTCTTCACTGATGAACTGCTTCA
GCCTCAATATCTTAAATGTATCCTATAATAATTTGGCTGGTGTTGTACCTACTGATAACA
ACTTCTCACGGTTTTCGCCTGACAGCTTTTTGGGTAATCCAGGACTTTGTGGATATTGGC
TTGGTTCTTCGTGCCGTTCATCTGGCCATCAACAGAAACCACTAATCTCAAAGGCTGCAA
TACTTGGAATTGCCGTGGGTGGGCTTGTTATCCTCCTGATGATCTTAGTAGCGGTCTGCA
GGCCTCATAGTCCACCTGTTTTCAAAGATGTCTCTGTTAGCAAACCAGTGAGCAATGTTC
CCCCCAAGCTGGTTATCCTTCATATGAACCTTTCCCTTCTTGTATACGAGGATATAATGA
CGATGACTGAAAACCTGAGTGAGAAGTACATCATTGGGTACGGAGCATCCAGCACGGTTA
TAAATGTGTTTCGAAGAACCGCAAACCAGTGGCAGTAAAAAAGCTATATGCCCACTATCC
ACAGAGCTTCAAGGAATTTGAAACTGAGCTTGAGACTGTTGGTAGCATCAAACACCGGAA
TCTAGTCAGTCTTCAAGGATATTCCCTATCTCCTGTTGGAAATCTTCTCTTCTACGATTA
CATGGAAAATGGAAGCCTCTGGGATGTTTTGCATGAAGGTCCAACTAAGAAGAAAAAACT
TGATTGGGAAACTCGTCTACGAATTGCTCTAGGTGCGGCCCAAGGCCTTGCTTATCTTCA
TCATGACTGTAGCCCACGGATAATACACAGGGATGTGAAATCAAAAAATATACTCCTTGA
TAAAGATTATGAGGCACATCTTACAGACTTTGGCATTGCTAAGAGTTTGTGTGTTTCAAA
AACTCACACGTCCACCTATGTCATGGGAACTATTGGCTATATCGATCCTGAGTATGCTCG
CACCTCCCGTCTCAATGAAAAGTCTGATGTCTACAGCTATGGCATTGTTCTGCTTGAGCT
GCTGACCGGAAAAAAGCCAGTGGACAACGAGTGCAATCTCCATCACTTGATCTTGTCAAA
GACGGCTAACAATGCTGTCATGGAGACAGTCGACCCGGACATTGCAGACACTTGCAAGGA
TCTTGGTGAGGTCAAGAAGGTGTTCCAGCTGGCGCTCCTTTGCACCAAGAGACAACCATC
GGATCGGCCGACAATGCACGAGGTTGTGCGCGTCCTGGACTGCCTAGTTCGTCCCGACCC
GCCACCGAAGTCCGCACAGCAGCTGGCCATGCCGCAGCGGCCTGCTGTCCCGAGCTACAT
CAACGAGTATGTCAGCTTAAGAGGCACCAGCGTGCTCTCCTGCGCCAACTCGTCGTGTAC
TTCCGATGCTGAGCTGTTTCTCAAGTTTGGCGAGGTCATTTCTCAGAACACAGAGTAGAA
TAGTCTGCAGAAATCGTCATCCGATCTTGGGATTCAGGCAAGCAGCTGGTGAAGCTAATC
AAGGTAGTGAAGTGAACTCACGTTTTGTGACTTTGTCCACATGTTGGGTGCCCAGAAAAT
TAACAAGAGAATTCTCAAGGGTTGTGGCTGGTGTTCTTTACTGTAAAAAAAATGCGTCCT
ACTTCTTTCTTCTTCCTTTTTTTTTATCTCGTTTTTGTCTAACTTAGGAGGTGTCCATGA
ATCTAGTACTAAATCTCAAGACAGCTTCTTCTGTTCTGTAACATTTCTGGGATTGGAATG
CTGGAACTGGTATTACTAATAGTCTCTCGGTTTGGACAAATTCGCAGGGTGGTG

consensusID : consensus_4600#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 317
fasta sequence 
                              [GGTAGTGAAGTGAACTCACGTTTTGTGACTTTGTCCACATGTTGGGTGCCCAGAAAATTAACAAGAGAATTCTCAAGGGTTGTGGCTGGTGTTCTTTACTGTAAAAAAAATGCGTCCTACTTCTTTCTTCTTCCTTTTTTTTTTATCTCGTTTTTGTCTAACTTAGGAGGTGTCCATGAATCTAGTACTAAATCTCAAGACAGCTTCTTCTGTTCTGTAACATTTCTGTTTTGCACTAACATCTGTAATGGCATCTGATACAGTAGTAGTAGCAATATAGTACTCCTAGTATAGCATATGGTATCCAAAAAAAAAAA]

[+] EMBL AU058147             [GGTAGTGAAGTGAACTCACGTTTTGTGACTTTGTCCACATGTTGGGTGCCCAGAAAATTAACAAGAGAATTCTCAAGGGTTGTGGCTGGTGTTCTTTACTGTAAAAAAAATGCGTCCTACTTCTTTCTTCTTCCTTTTTTTTTTATCTCGTTTTTGTCTAACTTAGGAGGTGTCCATGAATCTAGTACTAAATCTCAAGACAGCTTCTTCTGTTCTGTAACATTTCTGTTTTGCACTAACATCTGTAATGGCATCTGATACAGTAGTAGTAGCAATATAGTACTCCTAGTATAGCATATGGTATCCAAAAAAAAAAA]




>consensus_4600#1
GGTAGTGAAGTGAACTCACGTTTTGTGACTTTGTCCACATGTTGGGTGCCCAGAAAATTA
ACAAGAGAATTCTCAAGGGTTGTGGCTGGTGTTCTTTACTGTAAAAAAAATGCGTCCTAC
TTCTTTCTTCTTCCTTTTTTTTTTATCTCGTTTTTGTCTAACTTAGGAGGTGTCCATGAA
TCTAGTACTAAATCTCAAGACAGCTTCTTCTGTTCTGTAACATTTCTGTTTTGCACTAAC
ATCTGTAATGGCATCTGATACAGTAGTAGTAGCAATATAGTACTCCTAGTATAGCATATG
GTATCCAAAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_4600#0      ATCTCAGTGTCCATCGGCCATCGCCTCCTTTTCTCTCTCCTCTCCTCTCACCATCTTCTC 60
consensus_4600#1      ------------------------------------------------------------
                                                                                  

consensus_4600#0      CTACAGCAAATCACTCTTCTCTCTCTCTAAAAAACTTCACAAGCCTACTAGCCTACTACT 120
consensus_4600#1      ------------------------------------------------------------
                                                                                  

consensus_4600#0      AGGCACGTAGCTAGCCCCTGCCACTCTATCGCCCAGCACAAGCCATACAGCTACCCGCTG 180
consensus_4600#1      ------------------------------------------------------------
                                                                                  

consensus_4600#0      TCACTGCGCCAGCGGCCGCAGCTGCGCAAAGAGGAGCGCGAGAACCCAAGAAACCAACCA 240
consensus_4600#1      ------------------------------------------------------------
                                                                                  

consensus_4600#0      AGAGCTGCGTCCCATAAAGGCGCGCTGCTTCAATCCATCCATCTTCTGATCTTCCATATA 300
consensus_4600#1      ------------------------------------------------------------
                                                                                  

consensus_4600#0      CTTCGCTTCCTGTAAATGTCATCGCCGCCCCGGCGGTGCCTCGCAGCGGAGCAGCAGTGG 360
consensus_4600#1      ------------------------------------------------------------
                                                                                  

consensus_4600#0      CCATGACGCCGGCGCCGGCGGCCGCCTCCTACCGCGCTCTCGTCGCGCTCCTGCTCGTCG 420
consensus_4600#1      ------------------------------------------------------------
                                                                                  

consensus_4600#0      CCGTCGCCGTTGCCGATGATGGGTCGACGCTGCTGGAGATCAAGAAGTCCTTCCGCAATG 480
consensus_4600#1      ------------------------------------------------------------
                                                                                  

consensus_4600#0      TGGACAACGTACTGTACGATTGGGCCGGCGGCGACTACTGCTCGTGGCGCGGCGTCCTCT 540
consensus_4600#1      ------------------------------------------------------------
                                                                                  

consensus_4600#0      GCGACAACGTCACCTTCGCCGTCGCCGCGCTCAACCTATCCGGGCTCAACCTCGGAGGCG 600
consensus_4600#1      ------------------------------------------------------------
                                                                                  

consensus_4600#0      AGATCTCTCCGGCCGTCGGCAGGTTGAAGGGCATCGTCTCGATTGACTTGAAGTCGAATG 660
consensus_4600#1      ------------------------------------------------------------
                                                                                  

consensus_4600#0      GGCTGTCTGGGCAGATCCCTGATGAGATTGGCGATTGTTCATCACTAAAAACTCTGGATT 720
consensus_4600#1      ------------------------------------------------------------
                                                                                  

consensus_4600#0      TGTCTTTCAATAGCTTGGATGGGGACATTCCGTTCTCAGTATCGAAGCTGAAGCACATTG 780
consensus_4600#1      ------------------------------------------------------------
                                                                                  

consensus_4600#0      AGAGCTTGATATTGAAGAACAACCAACTGATCGGAGTGATCCCATCAACGCTCTCACAGC 840
consensus_4600#1      ------------------------------------------------------------
                                                                                  

consensus_4600#0      TCCCAAATTTGAAGATTTTGGACTTGGCACAGAACAAACTGAGTGGAGAGATACCAAGAC 900
consensus_4600#1      ------------------------------------------------------------
                                                                                  

consensus_4600#0      TGATATATTGGAACGAGGTTCTTCAATACTTGGGATTACGCGGTAATAATTTAGAAGGCA 960
consensus_4600#1      ------------------------------------------------------------
                                                                                  

consensus_4600#0      GCATCTCCCCAGATATATGCCAGTTGACTGGGCTTTGGTACTTTGACGTAAAGAACAACA 1020
consensus_4600#1      ------------------------------------------------------------
                                                                                  

consensus_4600#0      GCTTGACTGGGCCGATACCAGAAACCATTGGGAACTGTACAAGTTTTCAGGTCTTGGATT 1080
consensus_4600#1      ------------------------------------------------------------
                                                                                  

consensus_4600#0      TGTCTTACAATAAACTTTCTGGATCAATTCCTTTCAACATTGGTTTCCTACAAGTTGCTA 1140
consensus_4600#1      ------------------------------------------------------------
                                                                                  

consensus_4600#0      CACTATCTTTGCAAGGGAACATGTTTACTGGTCCTATTCCATCAGTTATTGGACTTATGC 1200
consensus_4600#1      ------------------------------------------------------------
                                                                                  

consensus_4600#0      AGGCTCTCGCTGTACTGGATCTGAGTTACAACCAATTGTCTGGTCCTATTCCATCGATAC 1260
consensus_4600#1      ------------------------------------------------------------
                                                                                  

consensus_4600#0      TAGGCAATTTAACATACACTGAGAAGCTGTATATGCAAGGCAATAAGTTAACAGGTCCAA 1320
consensus_4600#1      ------------------------------------------------------------
                                                                                  

consensus_4600#0      TACCACCTGAGCTTGGAAATATGTCAACCCTTCATTACTTAGAACTTAACGATAATCAAC 1380
consensus_4600#1      ------------------------------------------------------------
                                                                                  

consensus_4600#0      TTAGCGGGTTCATTCCTCCAGAGTTCGGAAAGCTAACAGGGTTATTTGACTTAAACCTTG 1440
consensus_4600#1      ------------------------------------------------------------
                                                                                  

consensus_4600#0      CAAACAACAACTTTGAAGGTCCAATCCCTGATAACATAAGCTCATGTGTGAATCTCAATA 1500
consensus_4600#1      ------------------------------------------------------------
                                                                                  

consensus_4600#0      GCTTCAATGCTTATGGCAACAGATTAAATGGGACCATTCCTCCTTCATTGCATAAACTTG 1560
consensus_4600#1      ------------------------------------------------------------
                                                                                  

consensus_4600#0      AGAGCATGACTTATTTGAATTTGTCATCAAATTTTCTAAGTGGTTCTATTCCTATTGAGC 1620
consensus_4600#1      ------------------------------------------------------------
                                                                                  

consensus_4600#0      TATCGAGAATCAACAATTTGGACACCTTGGATTTATCCTGTAACATGATTACTGGCCCAA 1680
consensus_4600#1      ------------------------------------------------------------
                                                                                  

consensus_4600#0      TTCCATCAACCATTGGGAGTTTGGAGCATCTATTAAGACTTAACTTGAGCAACAATGGTC 1740
consensus_4600#1      ------------------------------------------------------------
                                                                                  

consensus_4600#0      TAGTAGGATTCATTCCTGCAGAAATTGGCAACTTGAGGAGTATCATGGAGATTGATATGT 1800
consensus_4600#1      ------------------------------------------------------------
                                                                                  

consensus_4600#0      CCAACAATCATCTTGGCGGTTTGATTCCTCAAGAACTCGGAATGCTGCAAAATCTGATGT 1860
consensus_4600#1      ------------------------------------------------------------
                                                                                  

consensus_4600#0      TGTTAAATCTCAAAAACAACAACATAACTGGGGATGTCTCTTCACTGATGAACTGCTTCA 1920
consensus_4600#1      ------------------------------------------------------------
                                                                                  

consensus_4600#0      GCCTCAATATCTTAAATGTATCCTATAATAATTTGGCTGGTGTTGTACCTACTGATAACA 1980
consensus_4600#1      ------------------------------------------------------------
                                                                                  

consensus_4600#0      ACTTCTCACGGTTTTCGCCTGACAGCTTTTTGGGTAATCCAGGACTTTGTGGATATTGGC 2040
consensus_4600#1      ------------------------------------------------------------
                                                                                  

consensus_4600#0      TTGGTTCTTCGTGCCGTTCATCTGGCCATCAACAGAAACCACTAATCTCAAAGGCTGCAA 2100
consensus_4600#1      ------------------------------------------------------------
                                                                                  

consensus_4600#0      TACTTGGAATTGCCGTGGGTGGGCTTGTTATCCTCCTGATGATCTTAGTAGCGGTCTGCA 2160
consensus_4600#1      ------------------------------------------------------------
                                                                                  

consensus_4600#0      GGCCTCATAGTCCACCTGTTTTCAAAGATGTCTCTGTTAGCAAACCAGTGAGCAATGTTC 2220
consensus_4600#1      ------------------------------------------------------------
                                                                                  

consensus_4600#0      CCCCCAAGCTGGTTATCCTTCATATGAACCTTTCCCTTCTTGTATACGAGGATATAATGA 2280
consensus_4600#1      ------------------------------------------------------------
                                                                                  

consensus_4600#0      CGATGACTGAAAACCTGAGTGAGAAGTACATCATTGGGTACGGAGCATCCAGCACGGTTA 2340
consensus_4600#1      ------------------------------------------------------------
                                                                                  

consensus_4600#0      TAAATGTGTTTCGAAGAACCGCAAACCAGTGGCAGTAAAAAAGCTATATGCCCACTATCC 2400
consensus_4600#1      ------------------------------------------------------------
                                                                                  

consensus_4600#0      ACAGAGCTTCAAGGAATTTGAAACTGAGCTTGAGACTGTTGGTAGCATCAAACACCGGAA 2460
consensus_4600#1      ------------------------------------------------------------
                                                                                  

consensus_4600#0      TCTAGTCAGTCTTCAAGGATATTCCCTATCTCCTGTTGGAAATCTTCTCTTCTACGATTA 2520
consensus_4600#1      ------------------------------------------------------------
                                                                                  

consensus_4600#0      CATGGAAAATGGAAGCCTCTGGGATGTTTTGCATGAAGGTCCAACTAAGAAGAAAAAACT 2580
consensus_4600#1      ------------------------------------------------------------
                                                                                  

consensus_4600#0      TGATTGGGAAACTCGTCTACGAATTGCTCTAGGTGCGGCCCAAGGCCTTGCTTATCTTCA 2640
consensus_4600#1      ------------------------------------------------------------
                                                                                  

consensus_4600#0      TCATGACTGTAGCCCACGGATAATACACAGGGATGTGAAATCAAAAAATATACTCCTTGA 2700
consensus_4600#1      ------------------------------------------------------------
                                                                                  

consensus_4600#0      TAAAGATTATGAGGCACATCTTACAGACTTTGGCATTGCTAAGAGTTTGTGTGTTTCAAA 2760
consensus_4600#1      ------------------------------------------------------------
                                                                                  

consensus_4600#0      AACTCACACGTCCACCTATGTCATGGGAACTATTGGCTATATCGATCCTGAGTATGCTCG 2820
consensus_4600#1      ------------------------------------------------------------
                                                                                  

consensus_4600#0      CACCTCCCGTCTCAATGAAAAGTCTGATGTCTACAGCTATGGCATTGTTCTGCTTGAGCT 2880
consensus_4600#1      ------------------------------------------------------------
                                                                                  

consensus_4600#0      GCTGACCGGAAAAAAGCCAGTGGACAACGAGTGCAATCTCCATCACTTGATCTTGTCAAA 2940
consensus_4600#1      ------------------------------------------------------------
                                                                                  

consensus_4600#0      GACGGCTAACAATGCTGTCATGGAGACAGTCGACCCGGACATTGCAGACACTTGCAAGGA 3000
consensus_4600#1      ------------------------------------------------------------
                                                                                  

consensus_4600#0      TCTTGGTGAGGTCAAGAAGGTGTTCCAGCTGGCGCTCCTTTGCACCAAGAGACAACCATC 3060
consensus_4600#1      ------------------------------------------------------------
                                                                                  

consensus_4600#0      GGATCGGCCGACAATGCACGAGGTTGTGCGCGTCCTGGACTGCCTAGTTCGTCCCGACCC 3120
consensus_4600#1      ------------------------------------------------------------
                                                                                  

consensus_4600#0      GCCACCGAAGTCCGCACAGCAGCTGGCCATGCCGCAGCGGCCTGCTGTCCCGAGCTACAT 3180
consensus_4600#1      ------------------------------------------------------------
                                                                                  

consensus_4600#0      CAACGAGTATGTCAGCTTAAGAGGCACCAGCGTGCTCTCCTGCGCCAACTCGTCGTGTAC 3240
consensus_4600#1      ------------------------------------------------------------
                                                                                  

consensus_4600#0      TTCCGATGCTGAGCTGTTTCTCAAGTTTGGCGAGGTCATTTCTCAGAACACAGAGTAGAA 3300
consensus_4600#1      ------------------------------------------------------------
                                                                                  

consensus_4600#0      TAGTCTGCAGAAATCGTCATCCGATCTTGGGATTCAGGCAAGCAGCTGGTGAAGCTAATC 3360
consensus_4600#1      ------------------------------------------------------------
                                                                                  

consensus_4600#0      AAGGTAGTGAAGTGAACTCACGTTTTGTGACTTTGTCCACATGTTGGGTGCCCAGAAAAT 3420
consensus_4600#1      --GGTAGTGAAGTGAACTCACGTTTTGTGACTTTGTCCACATGTTGGGTGCCCAGAAAAT 58
                        **********************************************************

consensus_4600#0      TAACAAGAGAATTCTCAAGGGTTGTGGCTGGTGTTCTTTACTGTAAAAAAAATGCGTCCT 3480
consensus_4600#1      TAACAAGAGAATTCTCAAGGGTTGTGGCTGGTGTTCTTTACTGTAAAAAAAATGCGTCCT 118
                      ************************************************************

consensus_4600#0      ACTTCTTTCTTCTTCCTTTTTTTTT-ATCTCGTTTTTGTCTAACTTAGGAGGTGTCCATG 3539
consensus_4600#1      ACTTCTTTCTTCTTCCTTTTTTTTTTATCTCGTTTTTGTCTAACTTAGGAGGTGTCCATG 178
                      ************************* **********************************

consensus_4600#0      AATCTAGTACTAAATCTCAAGACAGCTTCTTCTGTTCTGTAACATTTCTGGGATTGG--A 3597
consensus_4600#1      AATCTAGTACTAAATCTCAAGACAGCTTCTTCTGTTCTGTAACATTTCTGTTTTGCACTA 238
                      **************************************************   *     *

consensus_4600#0      ATGCTGGAACTGGTATTACTAATAGTCTCTCGGTTTGGACAA-ATTCGCAGGGTGGTG-- 3654
consensus_4600#1      ACATCTGTAATGGCATCTGATACAGTAGTAGTAGCAATATAGTACTCCTAGTATAGCATA 298
                      *     * * *** **     * ***            * *  * **  **  * *    

consensus_4600#0      -------------------
consensus_4600#1      TGGTATCCAAAAAAAAAAA 317


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)