These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_4687#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1432 fasta sequence [GAACCAAGAAAAGTCTCTCTCTCCTCTCCTCTCTTCTTCATCAACACACACTGGTTGACCAACCAGCTAGCTGATCGAGTTCGTTGTTTACCATCCTATTAATACCCCTTCCTCTCTCTCTTCTCCCCTCCTGAATTTCTCTCTTGGTAGAGGTAGAATTGATCTCCTTTCTTGTTCTTCTTCGAGTTCTTCTTAATTGGAGTTCTTGGAGCAGCATCGGTAGTCGTCGTCTTCGTCGATCCAGCATCTCAAGGAATTCGAGGAGGAGGGGGTGGGCATGAGCGGGATGAATTCGCTGAGCATGGTGGAGGCGAGGCTGCCGCCGGGGTTCAGGTTCCACCCGCGAGACGACGAGCTCGTGCTGGACTACCTGGAAAGGAAGCTCCTCGACGGCGGCGTGGGCGGCGCCGCGGCGGCGGCGGCGGCGGTCACCATCTACGGCTGCCCGGTGATGGTCGACGTCGATCTCAACAAGTGCGAGCCATGGGACCTTCCTGAGATCGCTTGCGTTGGTGGCAAGGAGTGGTACTTCTATAGCCTTAGGGATAGGAAGTATGCAACTGGCCAACGAACAAATAGAGCAACCGAATCGGGCTACTGGAAGGCCACAGGAAAAGATCGCCCAATAAGCCGGAAAGGATTGCTCGTCGGTATGCGAAAAACCCTGGTGTTCTACAAAGGTAGAGCCCCTAAGGGGAAGAAGACCGAGTGGGTCATGCATGAATTCCGCAAAGAAGGACAAGGGGATCCGATGAAGTTGCCTCTCAAGGAGGACTGGGTCTTGTGTAGAGTCTTCTACAAGAGTAGGACAACCATTGCCAAGCTGCCAACGGAGGGTAGCTACAACAATATTGACAGTGTGGCCACAACTTCACTGCCTCCCCTCACTGACAACTACATTGCATTTGATCAGCCTGGTTCAATGCAAAACCTAGAGGGTTATGAGCAAGTGCCCTGCTTCTCCAATAATCCCTCTCAACAGCCATCGTCGTCGATGAATGTTCCGTTGACATCGGCCATGGTTGATCAAGAGCAAAACAATATGGGTAGGGCGATCAAGGATGTGCTGAGCCAATTCACCAAGTTTGAAGGCAATGTGAAGAGGGAGGCCCTTCAAAGTAATTTTTCCCAGGATGGATTTGATTACTTGGCTGAGAGTGGCTTCACACAAATGTGGAACTCACTCAGTTGATTTAATTTCGAAGGAGATATATATTGATTGTTGCGAATTGAGGAGGAAACTCTTAAAGTGTGCTTATGTGCTATTGCATGTAATTGTGATATAGACGTATAGTACCATTCTAGTTCACATTATTTGCAAAAAAAAAGGGGTGATCAAAAGAGATATTATCATCATCAATGATGTAAATACATTATTTGTGTACTAGGGTGTGAT-AAAAAAAATTAGTGCATGATGCTAAAAAAAAAAAAT] [+] EMBL AK063648 [GAACCAAGAAAAGTCTCTCTCTCCTCTCCTCTCTTCTTCATCAACACACACTGGTTGACCAACCAGCTAGCTGATCGAGTTCGTTGTTTACCATCCTATTAATACCCCTTCCTCTCTCTCTTCTCCCCTCCTGAATTTCTCTCTTGGTAGAGGTAGAATTGATCTCCTTTCTTGTTCTTCTTCGAGTTCTTCTTAATTGGAGTTCTTGGAGCAGCATCGGTAGTCGTCGTCTTCGTCGATCCAGCATCTCAAGGAATTCGAGGAGGAGGGGGTGGGCATGAGCGGGATGAATTCGCTGAGCATGGTGGAGGCGAGGCTGCCGCCGGGGTTCAGGTTCCACCCGCGAGACGACGAGCTCGTGCTGGACTACCTGGAAAGGAAGCTCCTCGACGGCGGCGTGGGCGGCGCCGCGGCGGCGGCGGCGGCGGTCACCATCTACGGCTGCCCGGTGATGGTCGACGTCGATCTCAACAAGTGCGAGCCATGGGACCTTCCTGAGATCGCTTGCGTTGGTGGCAAGGAGTGGTACTTCTATAGCCTTAGGGATAGGAAGTATGCAACTGGCCAACGAACAAATAGAGCAACCGAATCGGGCTACTGGAAGGCCACAGGAAAAGATCGCCCAATAAGCCGGAAAGGATTGCTCGTCGGTATGCGAAAAACCCTGGTGTTCTACAAAGGTAGAGCCCCTAAGGGGAAGAAGACCGAGTGGGTCATGCATGAATTCCGCAAAGAAGGACAAGGGGATCCGATGAAGTTGCCTCTCAAGGAGGACTGGGTCTTGTGTAGAGTCTTCTACAAGAGTAGGACAACCATTGCCAAGCTGCCAACGGAGGGTAGCTACAACAATATTGACAGTGTGGCCACAACTTCACTGCCTCCCCTCACTGACAACTACATTGCATTTGATCAGCCTGGTTCAATGCAAAACCTAGAGGGTTATGAGCAAGTGCCCTGCTTCTCCAATAATCCCTCTCAACAGCCATCGTCGTCGATGAATGTTCCGTTGACATCGGCCATGGTTGATCAAGAGCAAAACAATATGGGTAGGGCGATCAAGGATGTGCTGAGCCAATTCACCAAGTTTGAAGGCAATGTGAAGAGGGAGGCCCTTCAAAGTAATTTTTCCCAGGATGGATTTGATTACTTGGCTGAGAGTGGCTTCACACAAATGTGGAACTCACTCAGTTGATTTAATTTCGAAGGAGATATATATTGATTGTTGCGAATTGAGGAGGAAACTCTTAAAGTGTGCTTATGTGCTATTGCATGTAATTGTGATATAGACGTATAGTACCATTCTAGTTCACATTATTTGCAAAAAAAAAGGGGTGATCAAAAGAGATATTATCATCATCAATGATGTAAATACATTATTTGTGTACTAGGGTGTGAT AAAAAAAATTAGTGCATGATGCTAAAA ] [+] EMBL C28309 [ GGTAGAATTNATCTCCTTTCTTGTNCTTCTTCGAGTTCTTCTTAATTGGAGTTCTTGGAGCAGCATCGGTAGTCGTCGTCTTCGTCGATCCAGCATCTCAAGGAATTCGAGGAGGAGGGGGTGGGCATNANCGGGATGAATTCNCTGAGCATGGTGGAGGCGAGGCTGCCGCCGGGGTTCAGG ] [+] EMBL CB097013 [ AAGTTGCCTCTCAAGGAGGACCGGGTCTTGTGTAGAGTCTTCTACAAGAGTAGGACAACCATTGCCAAGCTGCCAACGGAGGGTAGCTACAACAATATTGACAGTGTGGCCACAACTTCACTGCCTCCCCTCACTGACAACTACATTGCATTTGATCAGCCTGGTTCAATGCAAAACCTAGAGGNTTATGAGCAAGTGCCCTGCTTCTCCAATAATCCCTCTCANNAGCCATCGTCGTCGNNGNATGTTCCGTTGACATCGGCCATGGTTGATCAAGAGCAAAACAATATGGGTAGGGCGANCAAGGATGTGCTGAGCCAATTCACCAAGTTTGAAGGCAATGTGAAGAGGGAGGCCCTTCAAAGTAATTTTTCCCAGGATGGATTTGATTACTTGGCTGAGAGTGGCTTCACACAAATGTGGAACTCACTCAGTTGATTTAATTTCGAAGGAGATATATATTGATTGTTGCGAATTGAGGAGGAAACTCTTAAAGTGTGCTTATGTGCTATTGCATGTAATTGTGATATAGACGTATAGTACCATTCTAGTTCACATTATTTGC AAAAAAAGGGGTGATCAAAAGAGATATTATCATCATCAATGATGTAAATACATTATTTGTGTACTANGGTGTGATAAAAAAAAATTAGTGCATGATGCTAAAAAAAAAAAAT] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||