These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_4973#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1851 fasta sequence [CACGTCAGCCAAAACCGCTCTTAAAACCACCGAGGGATCTCATCTGCACCGGTTTTGATAGTTGAGGGACCCGTTGTGTCTGGTTTTTCGGTTGAGGGACCTCAAATGAACTTATTCCTTTTTTTTTTTTCGAACCTTCTCGAGAGGAGAGGCGTCGGGGCGGGGGGAATGGCGTCGTGGGAGGAGCAGCTGCGGGACGAGCTCGCCGGCCGAGACCTCGCCGTCGCCTCCGTCCCCGGGAAGGGCCGCGGCCTCTTCGCCGCACGCAGCTTCTTCCCAGGAGAAGTCGTTATTTCGCAAGAGCCTTACGCTTCTACACCAAACAAGATTTCTGTGGGCTCCAACTGCGACAATTGTTTCGCCTCCAGAAACCTGAGGAAGTGCTCCGTTTGTCGAGTTGCTTGGTACTGTGGGAGTGCGTGTCAGAGAGAAGAATGGAAGCTTCATCAACTTGAATGTCGAGCAATCGCCGCGCTTACAGAGGATAGAAAGAAGATGCTTACTCCCACAATTCGTTTGATGGTGCGGCTTGTACTTAGAAGAAAACTGCAGGATGACAAGGCTATTCCATCTTCAGGAACAGATAACTACAATCTAGTGGATGCATTAGAATCCCACCGCATAATATAGACATCTCCGAGGTTGATAAAAATCAACTGGTTTTATATGCTCAGATGGCCAATCTTGTCCAACTGATTCTTCCTTCATTCGAGCTTGATCTTAAGGAAATTACACATACCTTTTCCAAGTTTGCCTGCAACGCTCATACCATATGTGATCCTGAACTGAGGCCCCTTGGGACTGGACTATACCCTGTTTTATCTATTATTAACCACAGTTGTGTACCAAATGCAGTTTTGATATTTGAAGGTCGGACAGCATATGTTCGTGCATTGCAACCTATAAGTAAAAATGAGGAGGTATCAATAAGTTACATTGAAACTGCGGCAACCACTATGAAGAGACAGGACGATCTCAAGCACTACTACTTCACTTGCACATGTCCCCGTTGTGTTAAGGATTCTGAGGAAGATGCGCTCCTTGAGGGATACAGATGCAATGACCAAAAGTGTGATGGATTTCTTCTGCCTAATGCAGGAAACAAAGGTTATACATGCCAGAAATGTAGCACTTCTAGAGATGGGGAAGAGTTACAAAAGATGGCTAGCGATGTACTACTATTATCTGACAAAGTCTCTTCCTTAGTTTCATCTGGAATAGATAACAGTGAGGTAGGTTCTATGTACAAGACCATTGAAGAGCTAGAGCGGAAGCTTTACCATCCTTTGTCAATCACTTTGCTTCACACACGGGAAACACTCTTGAAGATATATATGGAGTTACAAGATTGGCAGACTGCATTGATGTATTGCAGATTGACAATTCCAGTTTATGAAAGAATTTACCCACCTTTTCACCCAATGATTGGATTACAGTTCTATACTTGCGGAAAGCTTGAATGGTTGCTTGAGTACACAGAGGATGCTCTGATGTCTTTAACCAGGGCAGCAGATATACTTCGCATAACGCATGGGACTAAATCCGAGTTCATGAAGGAACTTTTGGGCAAGCTAGAAGAAGTAAGGGCTGAAGCTTCTTTTAGGCTCTCGGCTGGAGATGAACAATAATTGAGTAACCATTTTATTGTGAAGCTCCAGGTCATCGTGATGGCAAATAGAATGTAACAATGTTGCAACAATGTTCAAATAGGATAGTACTAAGTAGACAATCTCTAAATTTAGAATAGCTTTGTTAATTCAACATTGGGATATAAGCTGCCCTGAAGGGCTCGCATCGGGACAAGAACTGTGAACTGGTGATATGGAAAATTCATTGTTCACCTATAAAAAA] [+] EMBL AK071176 [CACGTCAGCCAAAACCGCTCTTAAAACCACCGAGGGATCTCATCTGCACCGGTTTTGATAGTTGAGGGACCCGTTGTGTCTGGTTTTTCGGTTGAGGGACCTCAAATGAACTTATTCCTTTTTTTTTTTTCGAACCTTCTCGAGAGGAGAGGCGTCGGGGCGGGGGGAATGGCGTCGTGGGAGGAGCAGCTGCGGGACGAGCTCGCCGGCCGAGACCTCGCCGTCGCCTCCGTCCCCGGGAAGGGCCGCGGCCTCTTCGCCGCACGCAGCTTCTTCCCAGGAGAAGTCGTTATTTCGCAAGAGCCTTACGCTTCTACACCAAACAAGATTTCTGTGGGCTCCAACTGCGACAATTGTTTCGCCTCCAGAAACCTGAGGAAGTGCTCCGTTTGTCGAGTTGCTTGGTACTGTGGGAGTGCGTGTCAGAGAGAAGAATGGAAGCTTCATCAACTTGAATGTCGAGCAATCGCCGCGCTTACAGAGGATAGAAAGAAGATGCTTACTCCCACAATTCGTTTGATGGTGCGGCTTGTACTTAGAAGAAAACTGCAGGATGACAAGGCTATTCCATCTTCAGGAACAGATAACTACAATCTAGTGGATGCATTAGAATCCCACCGCATAATATAGACATCTCCGAGGTTGATAAAAATCAACTGGTTTTATATGCTCAGATGGCCAATCTTGTCCAACTGATTCTTCCTTCATTCGAGCTTGATCTTAAGGAAATTACACATACCTTTTCCAAGTTTGCCTGCAACGCTCATACCATATGTGATCCTGAACTGAGGCCCCTTGGGACTGGACTATACCCTGTTTTATCTATTATTAACCACAGTTGTGTACCAAATGCAGTTTTGATATTTGAAGGTCGGACAGCATATGTTCGTGCATTGCAACCTATAAGTAAAAATGAGGAGGTATCAATAAGTTACATTGAAACTGCGGCAACCACTATGAAGAGACAGGACGATCTCAAGCACTACTACTTCACTTGCACATGTCCCCGTTGTGTTAAGGATTCTGAGGAAGATGCGCTCCTTGAGGGATACAGATGCAATGACCAAAAGTGTGATGGATTTCTTCTGCCTAATGCAGGAAACAAAGGTTATACATGCCAGAAATGTAGCACTTCTAGAGATGGGGAAGAGTTACAAAAGATGGCTAGCGATGTACTACTATTATCTGACAAAGTCTCTTCCTTAGTTTCATCTGGAATAGATAACAGTGAGGTAGGTTCTATGTACAAGACCATTGAAGAGCTAGAGCGGAAGCTTTACCATCCTTTGTCAATCACTTTGCTTCACACACGGGAAACACTCTTGAAGATATATATGGAGTTACAAGATTGGCAGACTGCATTGATGTATTGCAGATTGACAATTCCAGTTTATGAAAGAATTTACCCACCTTTTCACCCAATGATTGGATTACAGTTCTATACTTGCGGAAAGCTTGAATGGTTGCTTGAGTACACAGAGGATGCTCTGATGTCTTTAACCAGGGCAGCAGATATACTTCGCATAACGCATGGGACTAAATCCGAGTTCATGAAGGAACTTTTGGGCAAGCTAGAAGAAGTAAGGGCTGAAGCTTCTTTTAGGCTCTCGGCTGGAGATGAACAATAATTGAGTAACCATTTTATTGTGAAGCTCCAGGTCATCGTGATGGCAAATAGAATGTAACAATGTTGCAACAATGTTCAAATAGGATAGTACTAAGTAGACAATCTCTAAATTTAGAATAGCTTTGTTAATTCAACATTGGGATATAAGCTGCCCTGAAGGGCTCGCATCGGGACAAGAACTGTGAACTGGTGATATGGAAAA ] [+] EMBL C72823 [ GCGGGGGGAATGGCGTCGTGGGAGGAGCAGCTGCGGGACGAGCTCGCCGGCCGAGACCTCGCCGTCGCCTCCGTCCCCGGGAAGGGCCGCGGCCTCTTCGCCGCACGCAGCTTCTTCCCAGGAGAAGTCGTTATTTCGCAAGAGCCTTACGCTTCTACACCAAACAAGATTTCTGTGGGCTCCAACTGCGACAATTGTTTCGCCTCCAGAAACCTGAGGAAGTGCTCCGTTTGTCGAGTTGCTTGGTACTGTGGGAGTGCGTGTCAGAGAGAAGAATGGAAGCTTCATCAACTTGAATGTCGAGCAATCGCCGCGCTTACAGAGGATAGAAAGAAGATGCTTACTCCCACAATTCGTTTGATGGTGCGGCTTGTACTTAGAAGAAAACTGCAGGATGACAANGCTATNCCATCTTCAGGAACAGATAACTACAATCTAGTG ] [+] EMBL AU085903 [ cCAAAAGATGGCTAGCGATGTACTACTATTATCTGACAAAGTCTCTTCCTTAGTTTCATCTGGAA ATAACAGTGAGGTAGGTTCTATGTACAAGACCATTGAAGAGCTAGAGCGGAAGCTTTACCATCCTTTGTCAATCACTTTGCTTCACACACGGGAAACACTCTTGAAGATATATATGGAGTTACAAGATTGGCAGACTGCATTGATGTATTGCAGATTGACAATTCCAGTTTATGAAAGAATTTACCCACCTTTTCACCCAATGATTGGATTACAGTTCTATACTTGCGGAAAGCTTGAATGGTTGCTTGAGTACACAGAGGATGCTCTGATGTCTTTAACCAGGGCAGCAGATATACTTCGCATAACGCATGGGACTAAATCCGAGTTCATGAAGGAACTTTTGGGCAAGCTAGAAGAAGTAAGGGCTGAAGCTTCTTTTAGGCTCTCGGCTGGAGATGAACAATAATTGAGTAACCATTTTATTGTGAAGCTCCAGGTCATCGTGATGGCAAATAGAATGTAACAATGTTGCAACAATGTTCAAATAGGATAGTACTAAGTAGACAATCTCTAAATTTAGAATAGCTTTGTTAATTCAACATTGGGATATAAGCTGCCCTGAAGGGCTCGCATCGGGACAAGAACTGTGAACTGGTGATATGGAAAATTCATTGTTCACCTATAAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||