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Oryza sativa
cluster # 5131 cluster # 5131       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5131#0 length = 1151 sequences # 3  

consensusID : consensus_5131#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1151
fasta sequence
                              [CGCTCCTCCCTCTCGCTGCTGCTGCTGCGGAGAGCGAAGGAGAGGGGAGGACGAGCTGCGCGGGCGCCATCCAGCAGCGGCTGCGAACAGCAACGTCGTAGCCGACGGGAGCCCGCCACCTACCCGCACCAACCCGTCCCCGAGGTTGGCTTTTGGTCGAGCAGTTGGTGGGCACCTAACCCGGCGAACTCCGGCTGAAGTAAGTGCGAGTGAGTAGTAGTAGTTGGGGGTGAGGAGGATGAAGAAGTTGTACCAGGGGAAGGGACGGAGGGTGCACCCGGCGCCGGCGCAGCAGGCGCAGGCGGATGCTGCTGCGGCGGCAGCGGTTGTGCTGCCGGCCGCTGTGCTGGCCCTGGCGTCGGCGCTCACGGCGGAGGAGCAGGAGGTGCTCGCCTACCTGCTGTCTGGAGGTGGGGCGGCCGGGGGACGCCGCCGCCGCCGCGGGGCTCACCCGCCGGAGATGGGGTGCGGGTGCTTCGGCTGCTACAAGAGCTTCTGGGCGCGTTGGGACGCGTCCCCCAACCGCCACGTCATCCACCGCATCATCGACGCCGCCGCGGCGGCAAACGCGGAGGCGGCGACTGCGAGGAGGATGCAAGTGCCACCAAGGAGGCGGATGCCAGCGTGGAACACCACCACCACGCCTGTGGCTTCGATGGCGAGGAGGACGGCGACTACGAGGGCGATGGCGACGACGAGGAGGAGGAGGAAGAGGGCGACAGCATGGACGGCGATGCGGACGACGAGACGACGTTGAGCGAGGGCGATTGCAGCAGCAGCAGCAGCAGCAACGCCGAGAAGAGCACGGTGGGGAGGCTGGTGCGCTTCATCGGGGAGAAGGTGTGGGGAGCTTGGAACTGAGCTCCTCCTCCTCCTGCAGCTGCTGCTCCCCATGTTCTTGTAGATTAGGAGAAGGAAGAAGACGACCAAGAAGGTCAGGTCAAGGTCAGTATCAGTAGTTGTTTTGATCAAGAGCACCTCAGCTCTATGCTCCTTTTGCTGTTCTTTCTTTTGATTTCTTGCACTCTGATGAGCACTGAGGTTTGGAGGGAAAATCAAGATGGTGTAGTGTAATCCAATCCAAATTACAGTTCTTCCCTTCAATCAACCTCACTGTACCATATTTTTGCTCCTTTGGTTCAACAATGAAC]

[+] EMBL AK103305             [CGCTCCTCCCTCTCGCTGCTGCTGCTGCGGAGAGCGAAGGAGAGGGGAGGACGAGCTGCGCGGGCGCCATCCAGCAGCGGCTGCGAACAGCAACGTCGTAGCCGACGGGAGCCCGCCACCTACCCGCACCAACCCGTCCCCGAGGTTGGCTTTTGGTCGAGCAGTTGGTGGGCACCTAACCCGGCGAACTCCGGCTGAAGTAAGTGCGAGTGAGTAGTAGTAGTTGGGGGTGAGGAGGATGAAGAAGTTGTACCAGGGGAAGGGACGGAGGGTGCACCCGGCGCCGGCGCAGCAGGCGCAGGCGGATGCTGCTGCGGCGGCAGCGGTTGTGCTGCCGGCCGCTGTGCTGGCCCTGGCGTCGGCGCTCACGGCGGAGGAGCAGGAGGTGCTCGCCTACCTGCTGTCTGGAGGTGGGGCGGCCGGGGGACGCCGCCGCCGCCGCGGGGCTCACCCGCCGGAGATGGGGTGCGGGTGCTTCGGCTGCTACAAGAGCTTCTGGGCGCGTTGGGACGCGTCCCCCAACCGCCACGTCATCCACCGCATCATCGACGCCGCCGCGGCGGCAAACGCGGAGGCGGCGACTGCGAGGAGGATGCAAGTGCCACCAAGGAGGCGGATGCCAGCGTGGAACACCACCACCACGCCTGTGGCTTCGATGGCGAGGAGGACGGCGACTACGAGGGCGATGGCGACGACGAGGAGGAGGAGGAAGAGGGCGACAGCATGGACGGCGATGCGGACGACGAGACGACGTTGAGCGAGGGCGATTGCAGCAGCAGCAGCAGCAGCAACGCCGAGAAGAGCACGGTGGGGAGGCTGGTGCGCTTCATCGGGGAGAAGGTGTGGGGAGCTTGGAACTGAGCTCCTCCTCCTCCTGCAGCTGCTGCTCCCCATGTTCTTGTAGATTAGGAGAAGGAAGAAGACGACCAAGAAGGTCAGGTCAAGGTCAGTATCAGTAGTTGTTTTGATCAAGAGCACCTCAGCTCTATGCTCCTTTTGCTGTTCTTTCTTTTGATTTCTTGCACTCTGATGAGCACTGAGGTTTGGAGGGAAAATCAAGATGGTGTAGTGTAATCCAATCCAAATTACAGTTCTTCCCTTCAATCAACCTCACTGTACCATATTTTTGCTCCTTTGGTTCAACAATGAAC]
[+] EMBL CA998849             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         CCACCAAGGAGGCGGATGCCAGAGTGGAACACCACCACCACGCCTGTGGCTTCGATGGCGAGGAGGACGGCGACTACGAGGGCGATGGCGACGACGAGGAGGAGGAGGAAGAGGGCGACAGCATGGACGGCGATGCGGACGACGAGACGACGTTGAGCGAGGGCGATTGCAGCAGCAGCAGCAGCAGCAACGCCGAGAAGAGCACGGTGGGGAGGCTGGTGCGCTTCATCGGGGAGAAGGTGTGGGGAGCTTGGAACTGAGCTCCTCCTCCTCCTGCAGCTGCTGCTCCCCATGTTCTTGTAGATTAGGAGAAGGAAGAAGACGACCAAGAAGGTCAGGTCAAGGTCAGTATCAGTAGTTGTTTTGATCAAGAGCACCTCAGCTCTATGCTCCTTTTGCTGTTCTTTCTTTTGATTTCTTGCACTCTGATGAGCACTGAGGTTTGGAGGGAAAATCAAGATGGTGTAGTGTAATCCAATCCAAATTACAGTTCTTCCCTTCAATCAACCTCACTGTAC                                ]
[+] EMBL AA750868             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             GAGAAGGAAGAAGACGACCAAGAAGGTCAGGTCAAGGTCAGTATCAGTAGTTGTTTTGATCAAGAGCACCTCAGCTC ATGCTCCTTTTGCTGTTCTTTCTTTTGATTTCTTGCACTCTGATGAGCACTGAGGTTTGGAGGGAAAATCAAGATGGTGTAGTGTAATCCAATCCAAATTACAGTTCTTCCCTTCAATCAACCTCACTGTACCATATTTTTGCTCCT                 ]


>consensus_5131#0 CGCTCCTCCCTCTCGCTGCTGCTGCTGCGGAGAGCGAAGGAGAGGGGAGGACGAGCTGCG CGGGCGCCATCCAGCAGCGGCTGCGAACAGCAACGTCGTAGCCGACGGGAGCCCGCCACC TACCCGCACCAACCCGTCCCCGAGGTTGGCTTTTGGTCGAGCAGTTGGTGGGCACCTAAC CCGGCGAACTCCGGCTGAAGTAAGTGCGAGTGAGTAGTAGTAGTTGGGGGTGAGGAGGAT GAAGAAGTTGTACCAGGGGAAGGGACGGAGGGTGCACCCGGCGCCGGCGCAGCAGGCGCA GGCGGATGCTGCTGCGGCGGCAGCGGTTGTGCTGCCGGCCGCTGTGCTGGCCCTGGCGTC GGCGCTCACGGCGGAGGAGCAGGAGGTGCTCGCCTACCTGCTGTCTGGAGGTGGGGCGGC CGGGGGACGCCGCCGCCGCCGCGGGGCTCACCCGCCGGAGATGGGGTGCGGGTGCTTCGG CTGCTACAAGAGCTTCTGGGCGCGTTGGGACGCGTCCCCCAACCGCCACGTCATCCACCG CATCATCGACGCCGCCGCGGCGGCAAACGCGGAGGCGGCGACTGCGAGGAGGATGCAAGT GCCACCAAGGAGGCGGATGCCAGCGTGGAACACCACCACCACGCCTGTGGCTTCGATGGC GAGGAGGACGGCGACTACGAGGGCGATGGCGACGACGAGGAGGAGGAGGAAGAGGGCGAC AGCATGGACGGCGATGCGGACGACGAGACGACGTTGAGCGAGGGCGATTGCAGCAGCAGC AGCAGCAGCAACGCCGAGAAGAGCACGGTGGGGAGGCTGGTGCGCTTCATCGGGGAGAAG GTGTGGGGAGCTTGGAACTGAGCTCCTCCTCCTCCTGCAGCTGCTGCTCCCCATGTTCTT GTAGATTAGGAGAAGGAAGAAGACGACCAAGAAGGTCAGGTCAAGGTCAGTATCAGTAGT TGTTTTGATCAAGAGCACCTCAGCTCTATGCTCCTTTTGCTGTTCTTTCTTTTGATTTCT TGCACTCTGATGAGCACTGAGGTTTGGAGGGAAAATCAAGATGGTGTAGTGTAATCCAAT CCAAATTACAGTTCTTCCCTTCAATCAACCTCACTGTACCATATTTTTGCTCCTTTGGTT CAACAATGAAC



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)