cluster # 5160

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Oryza sativa
cluster # 5160 cluster # 5160 Sequences # 3 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5160#0 length = 1117 sequences # 3
consensusID : consensus_5160#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1117
fasta sequence
                              [CCTCACTCTCTCTTTCTCTCCTCTCTTGCTCTCCACTCCTCCTCGGGCGGCGGTGGCAGGAGCTGGCGGCGTCAAGGGGGGCTCTCGGCCGCCTCGGGCTCTGGCCTGGAGCTGGCGGTGGCTGGGGCGGCTCTGCCTGGAGCTAACGGCGGCGGGGGCGACGACCTCGGCGAAGAGTGGGCGGTGGCGGGCCTCGTCTCACTCGGATCCGGAGGCGGCAGGCCTTGTCCTGCTCGGATCCGGCGACGGCGGGCCTCGTCCCGCCCGGATCCGGTAGCGGCCTCGGGGGAAGAGTGGGCGGCGACCTCGTTGACCTT-GGGGGAAGAGTGGGTGGCGGCGCCATCGCCATCTCCTCCTCACCGCCGACGACGAGGAGGTGGCCAGATGCAGCCCCTTCGTCGCCGCCTCGCCGCCCTATTCATCCCCCCACCCCCCGGGGCGGGTACCGGCGCCTCGGCTCCTCCGCCTCCGTGTCCACGACAACGGATGTGATTTGGGTGGAGGTTGGGACGACGAAGGGGGATAGGAGCTTATTCCATGTCGATTCGGCCGTGCTTGAGACCGGGTCGGTGCGGCGCTTCCTCGCGGTGGCTGGGCAGCGGGCCCGCGGCGGTGCGGTGGCGGTCGCCATGGACGCGCTGCTGTTCGAGCACCTGCTGTGGCTGCAGGCGGTGGGTACATGAGCTCAAGCTTGCCATGAAGCCGGTGCAATTCTTCTCCAGCTCCAGTGGGCTGGCGCCCCTTCTGCATCTCGATGTGGATGGGTTCAGTGGCCTCTTACCCTAATCCCCCACCTCGTGCTCTTTTCTCTCGCTCTTCATGGCGTGGCAAACCAGCGCCCAGCGGTGCCGCCGTGCTGCGCGTGT-GGTGGCCTGACGATGGCTCAAAGCAGAACATAGCGCCAGATTTGGTCAAGCC-CTCCAGATTTTCCCTTTACATGGTGATAAAACTAGCTATAATGGTTGTATTTTTTTGGTC-GAAC-TGCAAACATTTCAGTGTTGGTATCGTTGCATGAATTTTGTTTACGAATGTTCTATGGTTCACATGTGCAGCTGCCCATTGCCATTCTTCCTTCTCTGACAT-TATCTATGAAGTATGTATTTTTTTTCCTTGAAAA]

[+] EMBL AK061209             [CCTCACTCTCTCTTTCTCTCCTCTCTTGCTCTCCACTCCTCCTCGGGCGGCGGTGGCAGGAGCTGGCGGCGTCAAGGGGGGCTCTCGGCCGCCTCGGGCTCTGGCCTGGAGCTGGCGGTGGCTGGGGCGGCTCTGCCTGGAGCTAACGGCGGCGGGGGCGACGACCTCGGCGAAGAGTGGGCGGTGGCGGGCCTCGTCTCACTCGGATCCGGAGGCGGCAGGCCTTGTCCTGCTCGGATCCGGCGACGGCGGGCCTCGTCCCGCCCGGATCCGGTAGCGGCCTCGGGGGAAGAGTGGGCGGCGACCTCGTTGACCTT GGGGGAAGAGTGGGTGGCGGCGCCATCGCCATCTCCTCCTCACCGCCGACGACGAGGAGGTGGCCAGATGCAGCCCCTTCGTCGCCGCCTCGCCGCCCTATTCATCCCCCCACCCCCCGGGGCGGGTACCGGCGCCTCGGCTCCTCCGCCTCCGTGTCCACGACAACGGATGTGATTTGGGTGGAGGTTGGGACGACGAAGGGGGATAGGAGCTTATTCCATGTCGATTCGGCCGTGCTTGAGACCGGGTCGGTGCGGCGCTTCCTCGCGGTGGCTGGGCAGCGGGCCCGCGGCGGTGCGGTGGCGGTCGCCATGGACGCGCTGCTGTTCGAGCACCTGCTGTGGCTGCAGGCGGTGGGTACATGAGCTCAAGCTTGCCATGAAGCCGGTGCAATTCTTCTCCAGCTCCAGTGGGCTGGCGCCCCTTCTGCATCTCGATGTGGATGGGTTCAGTGGCCTCTTACCCTAATCCCCCACCTCGTGCTCTTTTCTCTCGCTCTTCATGGCGTGGCAAACCAGCGCCCAGCGGTGCCGCCGTGCTGCGCGTGT GGTGGCCTGACGATGGCTCAAAGCAGAACATAGCGCCAGATTTGGTCAAGCC CTCCAGATTTTCCCTTTACATGGTGATAAAACTAGCTATAATGGTTGTATTTTTTTGGTC GAAC TGCAAACATTTCAGTGTTGGTATCGTTGCATGAATTTTGTTTACGAATGTTCTATGGTTCACATGTGCAGCTGCCCATTGCCATTCTTCCTTCTCTGACAT TATCTATGAAGTATGTATTT              ]
[+] EMBL OS0838A              [                                         CTCGGGCGGCGGTGGCAGGAGCTGGCGGCGTCAAGGGGGGCTCTCGGCCGCCTCGGGCTCTGGCCTGGAGCTGGCGGTGGCTGGGGCGGCTCTGCCTGGAGCTAACGGCGGCGGGGGCGACGACCTCGGCGAAGAGTGGGCGGTGGCGGGCCTCGTCTCACTCGGATCCGGAGGCGGCAGGCCTTGTCCTGCTCGGATCCGGCGACGGCGGGCCTNGTNCCGNCCGGATCCGGTAGCGGCCTCGGGGGAAGAGTGGGCGGCGACCTCGTTGACCTTGGGGGGAAGAGTGGGTNGCGGCG CATTGGCATn                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL BI807140             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           tctGTGCTCTTTTCTCGCGCTCTTCATGGCGTGGCAAACCAGCGCCCAGCGGTGCC CCGT CTGCGCGTGTNGGTGGCCTGACGATGGCTCAAAGCAGAACATAGCGCCAGATTTGGTCAAGCCACTCCAGATTTTCCCTTTACATGGTGATAAAACTAGCTATAATGGTTGTATTTTTTTGGTCAGAACNTGCAAACATTTCAGTGTTGGTATC TTGCATGAATTTTGTTTACGAATGTTCTATGGTTCACATGTGCA CTGCCCATTGCCATNCTTCCNTCTCNGACATNTATCTATGAAGNATGTATNTTTTTTCCTTGAAAA]




>consensus_5160#0
CCTCACTCTCTCTTTCTCTCCTCTCTTGCTCTCCACTCCTCCTCGGGCGGCGGTGGCAGG
AGCTGGCGGCGTCAAGGGGGGCTCTCGGCCGCCTCGGGCTCTGGCCTGGAGCTGGCGGTG
GCTGGGGCGGCTCTGCCTGGAGCTAACGGCGGCGGGGGCGACGACCTCGGCGAAGAGTGG
GCGGTGGCGGGCCTCGTCTCACTCGGATCCGGAGGCGGCAGGCCTTGTCCTGCTCGGATC
CGGCGACGGCGGGCCTCGTCCCGCCCGGATCCGGTAGCGGCCTCGGGGGAAGAGTGGGCG
GCGACCTCGTTGACCTTGGGGGAAGAGTGGGTGGCGGCGCCATCGCCATCTCCTCCTCAC
CGCCGACGACGAGGAGGTGGCCAGATGCAGCCCCTTCGTCGCCGCCTCGCCGCCCTATTC
ATCCCCCCACCCCCCGGGGCGGGTACCGGCGCCTCGGCTCCTCCGCCTCCGTGTCCACGA
CAACGGATGTGATTTGGGTGGAGGTTGGGACGACGAAGGGGGATAGGAGCTTATTCCATG
TCGATTCGGCCGTGCTTGAGACCGGGTCGGTGCGGCGCTTCCTCGCGGTGGCTGGGCAGC
GGGCCCGCGGCGGTGCGGTGGCGGTCGCCATGGACGCGCTGCTGTTCGAGCACCTGCTGT
GGCTGCAGGCGGTGGGTACATGAGCTCAAGCTTGCCATGAAGCCGGTGCAATTCTTCTCC
AGCTCCAGTGGGCTGGCGCCCCTTCTGCATCTCGATGTGGATGGGTTCAGTGGCCTCTTA
CCCTAATCCCCCACCTCGTGCTCTTTTCTCTCGCTCTTCATGGCGTGGCAAACCAGCGCC
CAGCGGTGCCGCCGTGCTGCGCGTGTGGTGGCCTGACGATGGCTCAAAGCAGAACATAGC
GCCAGATTTGGTCAAGCCCTCCAGATTTTCCCTTTACATGGTGATAAAACTAGCTATAAT
GGTTGTATTTTTTTGGTCGAACTGCAAACATTTCAGTGTTGGTATCGTTGCATGAATTTT
GTTTACGAATGTTCTATGGTTCACATGTGCAGCTGCCCATTGCCATTCTTCCTTCTCTGA
CATTATCTATGAAGTATGTATTTTTTTTCCTTGAAAA
clustalw multiple alignements is not computed in this case