cluster # 5232

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Oryza sativa
cluster # 5232 cluster # 5232 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5232#0 length = 924 sequences # 3

consensusID : consensus_5232#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 924
fasta sequence

                              [CATAGAAACGTTGTCACTCTCATCGGCTACTGCCAAGAAGGAGGTCTACAAATGCTGGTGTTCGAGTACCTGCCCAATGGCAGTGTCTGTGGCCATCTGTACGCAAACACCGGCAAAGAGTCAATGACAAGACTAGAGTTCAAGCAGAGGCTCTCAATAGCAATTGGAGCGGCCAAAGGTCTGAATCATCTGCACAGCCTCGTGCCTCCTTTGATCCACAAGGGCTTCAAGACGAGCAATGTTTTGGTCGATGAGAACTTCATCGCGAAGGTGGCTGACGCCGGAATCGACAGGCTGCTCAGAGGATTCGACGGCGCCGCGCCGTCGCATCATCCGTCGTCGTCTTGCAGCAGCATCTACCAAGACCCAGAGGTGCATTCCTTGGCGCAGCTTTCTGAAAGCAGCGACGTGTACAGCTTTGGGGTTTTTCTTTTGGAGCTCATCACTGGCAAAGAAGCAGCGAGCCTGATTTCTTCAGAACCAAGAGAACCTCTGGTTCATTGGATGGAGTCACATTTCAGTTCGAACAACGAGGTGACGG-ATCCAAGGTTGGGAGG-CAGCTTCACGT-CGG-AGGGG-ATG-AAGG-AG-CTGG-TCGGGCTGACGTTG-CAGTGCG-TCAGCACGTCGGCGAGACGGCGGCCGAAGATGCGGCTGATCGCGGCGGAGCTCGACCGGATTCTGGAGAAGGAGATGAGCCTCACCACCGTCATGGGCGACGGCACCGCCATTGTCACGCTCGGTAGCCAGCTCTTCACGTCCTGAACTTCGTAATCGACAGGGAGGTTGGCAGAATTAAATTTGCATGCATGCCTGATATTTGTAGCCATGCATGGCAAATTGGCAAGAACGATGTGTGTAAGTAAAATTGTG-TTTGGATGTGCAATTTAATCTGACCACAAGATGATTAAAGTTTGGTTCAAAAAAAANAAA]

[+] EMBL AK111919             [CATAGAAACGTTGTCACTCTCATCGGCTACTGCCAAGAAGGAGGTCTACAAATGCTGGTGTTCGAGTACCTGCCCAATGGCAGTGTCTGTGGCCATCTGTACGCAAACACCGGCAAAGAGTCAATGACAAGACTAGAGTTCAAGCAGAGGCTCTCAATAGCAATTGGAGCGGCCAAAGGTCTGAATCATCTGCACAGCCTCGTGCCTCCTTTGATCCACAAGGGCTTCAAGACGAGCAATGTTTTGGTCGATGAGAACTTCATCGCGAAGGTGGCTGACGCCGGAATCGACAGGCTGCTCAGAGGATTCGACGGCGCCGCGCCGTCGCATCATCCGTCGTCGTCTTGCAGCAGCATCTACCAAGACCCAGAGGTGCATTCCTTGGCGCAGCTTTCTGAAAGCAGCGACGTGTACAGCTTTGGGGTTTTTCTTTTGGAGCTCATCACTGGCAAAGAAGCAGCGAGCCTGATTTCTTCAGAACCAAGAGAACCTCTGGTTCATTGGATGGAGTCACATTTCAGTTCGAACAACGAGGTGACGG ATCCAAGGTTGGGAGG CAGCTTCACGT CGG AGGGG ATG AAGG AG CTGG TCGGGCTGACGTTG CAGTGCG TCAGCACGTCGGCGAGACGGCGGCCGAAGATGCGGCTGATCGCGGCGGAGCTCGACCGGATTCTGGAGAAGGAGATGAGCCTCACCACCGTCATGGGCGACGGCACCGCCATTGTCACGCTCGGTAGCCAGCTCTTCACGTCCTGAACTTCGTAATCGACAGGGAGGTTGGCAGAATTAAATTTGCATGCATGCCTGATATTTGTAGCCATGCATGGCAAATTGGCAAGAACGATGTGTGTAAGTAAAATTGTG TTTGGATGTGCAATTTAATCTGACCACAAGATG                           ]
[+] EMBL CA756654             [                                                                                                                                                                                                                                                                                                                                                                                                                   GCGACGTGTACAGCTTTGGGGTTTTTCTTTTGGAGCTCATCACTGGCAAAGAAGCAGCGAGCCTGATTTCTTCAGAACCAAGAGAACCTCTGGTTCATTGGATGGAGTCACATTTCAGTTCGAACAACGAGGTGACGG ATCCAAGGCTGGGAGG CAGCTTCACGT CGG AGGGG ATG AAGG AG CTGG TCGGGCTGACGTTG CAGTGCG TCAGCACGTCGGCGAGACGGCGGCCGAAGATGCGGCTGATCGCGGCGGAGCTCGACCGGATTCTGGAGAAGGAGATGAGCCTCACCACCGTCATGGGCGACGGCACCGCCATTGTCACGCTCGGTAGCCAGCTCTTCACGTCCTGAACTTCGTAATCGACAGGGAGGTTGGCAGAATTAAATTTGCATGCATGCCTGATATTTGTAGCCATGCATGGCAAATTGGCAAGAACGATGTGTGTAAGTAAAATTGTGTTTTGGATGTGCAATTTAATCTGAGCACAAGATGATTAAAGTTTGGTTC            ]
[+] EMBL C99680               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           GAGTCACATTTCAGTTCGAACAACGAGGTGACGGAATCCAAGGTTGGGAGGTCAGCTTCACGTNCGGTAGGGGAATGCAAGGTAGTCTGGTTCGGGTTGACGTTGNCAGTNCGTTCAGCACGTCGGCGAGACGGCGGCCGAAGATGCGGCTGATCGCGGCGGAGCTCGACCGGATTCTGGAGAAGGAGATGAGCCTCACCACCGTCATGGGCGACGGCACCGCCATTGTCACGCTCGGTAGCCAGCTCTTCACGTCCTGAA TTCGTAATCGACAGGGAGGTTGGCAGAATTAAATTTGCATGCATGCCTGATATTTGTAGCCATGCATGGCAAATTGGCAAGAACGATGTGTGTAAGTAAAATTGTG TTTGGATGTGCAATTTAATCTGACCACAAGATGATTAAAGTTTANNNAAAAAAAAANAAA]




>consensus_5232#0
CATAGAAACGTTGTCACTCTCATCGGCTACTGCCAAGAAGGAGGTCTACAAATGCTGGTG
TTCGAGTACCTGCCCAATGGCAGTGTCTGTGGCCATCTGTACGCAAACACCGGCAAAGAG
TCAATGACAAGACTAGAGTTCAAGCAGAGGCTCTCAATAGCAATTGGAGCGGCCAAAGGT
CTGAATCATCTGCACAGCCTCGTGCCTCCTTTGATCCACAAGGGCTTCAAGACGAGCAAT
GTTTTGGTCGATGAGAACTTCATCGCGAAGGTGGCTGACGCCGGAATCGACAGGCTGCTC
AGAGGATTCGACGGCGCCGCGCCGTCGCATCATCCGTCGTCGTCTTGCAGCAGCATCTAC
CAAGACCCAGAGGTGCATTCCTTGGCGCAGCTTTCTGAAAGCAGCGACGTGTACAGCTTT
GGGGTTTTTCTTTTGGAGCTCATCACTGGCAAAGAAGCAGCGAGCCTGATTTCTTCAGAA
CCAAGAGAACCTCTGGTTCATTGGATGGAGTCACATTTCAGTTCGAACAACGAGGTGACG
GATCCAAGGTTGGGAGGCAGCTTCACGTCGGAGGGGATGAAGGAGCTGGTCGGGCTGACG
TTGCAGTGCGTCAGCACGTCGGCGAGACGGCGGCCGAAGATGCGGCTGATCGCGGCGGAG
CTCGACCGGATTCTGGAGAAGGAGATGAGCCTCACCACCGTCATGGGCGACGGCACCGCC
ATTGTCACGCTCGGTAGCCAGCTCTTCACGTCCTGAACTTCGTAATCGACAGGGAGGTTG
GCAGAATTAAATTTGCATGCATGCCTGATATTTGTAGCCATGCATGGCAAATTGGCAAGA
ACGATGTGTGTAAGTAAAATTGTGTTTGGATGTGCAATTTAATCTGACCACAAGATGATT
AAAGTTTGGTTCAAAAAAAANAAA

clustalw multiple alignements is not computed in this case