cluster # 534

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Oryza sativa
cluster # 534 cluster # 534 Sequences # 2 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_534#0 length = 1425 sequences # 2
consensusID : consensus_534#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1425
fasta sequence
                              [GAATTTGGAGAAAAGTGCAGGTGGAATCAAGATTGTCCGGGTTGAAAAGGCTGTTGAGCCAAGAAAAGAGTTTGATGAAACTGCAAAAGCAAGTGGTGGAGCGACACGAAACACATTGCCCCTTTTTGATAGTATTGCCAAAGAGAATTTAATGAGGCCCTCAATTTTTCGGGAAACTAAGATGCAGCACATGGCTGCTGAGGCAGCTGTGTTGCTATCCAAGGAATCCGATGACATGAGGAGTTGTGCCATGTCATTAGGCTCATCTGGCTTGCATGATAAGGAGCAGGAGTCTTCGCTGGAATCAGAAGGTGGCTGTGAAGAAGATGATGATGATGACATGGATAGTGAATACTTGGCATATACCAGAGATAGTACTAAAACGGCAACTAATGATGGTGAATGTCTTACTCAAGAGGAGATGGCTGGATCATCAGGGAATCAGAAGCCACTATCTTCACTGGACTTCACAACAGGTTGTGATGACATGCCATGTTCCGATGTCCATCACCATTCACTGGGAAATAGTGAACTGGAAAATGACGATACCACTAAGTCGTGTGCTTGTTCTTTCTGTCTTAAGGCTGCATTCATGTGGACCGATCTCCATTATCAGGACACAAGGGGACGGCTTGCTGCATTGAAGAAGAGCATAAAGTTCGCTAGATTGCTGGGCAAGAGAAGCCAAGGAGATGAATATTCTGTTAATGCAGGCAGATACAACTTGAAACGGGTTGCAGAGATGGAGTTTGAGCTATATCAACAGCAAAGATCACTCTTCCTTCATACAGAAAATGTCCTTATCCGTGAGAGCGCACAGCTTCATTCATCTCTTGTGAAGTTAAAGG-AATTCAGAGAGAACTGCAAGACAGATCTCGAGACGGCTAGCAGTTCGTTGTTGGGAAAATGAATCTTTCATGGTTGTGCTGTTAAACTGCTTTTGCCTGGGATTCTTCAGATCAGCTGGGCCAGTTTGAGTCAAGTTGTGCATTGAGATTGGTTGATTGCTAGGAAGATTAGTGGTTATTGCCAGTCAGGAAGTTTGGTTATAGTGATGGTACTACCTATATGCAGTGTTCAGCATCTTTGTTTGTAAAAATCGTGTGGGAAGGTCGGAACTCCAAGTTAGCGACATGATTCTCCTCAGTTGTAACTGGCAGTTAGCTTGCGCCATGTGGTATCTGTATGATGTTTCCTGCTCCCAAGCATAATGGTGGAAGAACGATGATTTGACTTCTTTTTTTTCTTGCTTGCCGCCCCTCAATGTTCAGGTCTGTTTGCTTACACTGGCTAACATGTAGTAAGTACTCTGCAGATTTGCTGTTACTACGTGTACTATCCTTGACTTGCGTGAGCCGGCCGATGCCTGTATCGCTGTAACCACAAGCATTGTCAAGGATTTTCAATCTGATCTTTAACATTCTC]

[+] EMBL AK072544             [GAATTTGGAGAAAAGTGCAGGTGGAATCAAGATTGTCCGGGTTGAAAAGGCTGTTGAGCCAAGAAAAGAGTTTGATGAAACTGCAAAAGCAAGTGGTGGAGCGACACGAAACACATTGCCCCTTTTTGATAGTATTGCCAAAGAGAATTTAATGAGGCCCTCAATTTTTCGGGAAACTAAGATGCAGCACATGGCTGCTGAGGCAGCTGTGTTGCTATCCAAGGAATCCGATGACATGAGGAGTTGTGCCATGTCATTAGGCTCATCTGGCTTGCATGATAAGGAGCAGGAGTCTTCGCTGGAATCAGAAGGTGGCTGTGAAGAAGATGATGATGATGACATGGATAGTGAATACTTGGCATATACCAGAGATAGTACTAAAACGGCAACTAATGATGGTGAATGTCTTACTCAAGAGGAGATGGCTGGATCATCAGGGAATCAGAAGCCACTATCTTCACTGGACTTCACAACAGGTTGTGATGACATGCCATGTTCCGATGTCCATCACCATTCACTGGGAAATAGTGAACTGGAAAATGACGATACCACTAAGTCGTGTGCTTGTTCTTTCTGTCTTAAGGCTGCATTCATGTGGACCGATCTCCATTATCAGGACACAAGGGGACGGCTTGCTGCATTGAAGAAGAGCATAAAGTTCGCTAGATTGCTGGGCAAGAGAAGCCAAGGAGATGAATATTCTGTTAATGCAGGCAGATACAACTTGAAACGGGTTGCAGAGATGGAGTTTGAGCTATATCAACAGCAAAGATCACTCTTCCTTCATACAGAAAATGTCCTTATCCGTGAGAGCGCACAGCTTCATTCATCTCTTGTGAAGTTAAAGG AATTCAGAGAGAACTGCAAGACAGATCTCGAGACGGCTAGCAGTTCGTTGTTGGGAAAATGAATCTTTCATGGTTGTGCTGTTAAACTGCTTTTGCCTGGGATTCTTCAGATCAGCTGGGCCAGTTTGAGTCAAGTTGTGCATTGAGATTGGTTGATTGCTAGGAAGATTAGTGGTTATTGCCAGTCAGGAAGTTTGGTTATAGTGATGGTACTACCTATATGCAGTGTTCAGCATCTTTGTTTGTAAAAATCGTGTGGGAAGGTCGGAACTCCAAGTTAGCGACATGATTCTCCTCAGTTGTAACTGGCAGTTAGCTTGCGCCATGTGGTATCTGTATGATGTTTCCTGCTCCCAAGCATAATGGTGGAAGAACGATGATTTGACTTCTTTTTTTTCTTGCTTGCCGCCCCTCAATGTTCAGGTCTGTTTGCTTACACTGGCTAACATGTAGTAAGTACTCTGCAGATTTGCTGTTACTACGTGTACTATCCTTGACTTGCGTGAGCCGGCCGATGCCTGTATCGCTGTAACCACAAGCATTGTCAAGGATTTTCAATCTGATCTTTAACATTCTC]
[+] EMBL AU062544             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        caanCACCNTTNACTNGNAAATAGTNAACTGGAAAATNACGATACCACTAANTNGTGTNCNTATACTNNNTATNTTAAGGCTGCATTCATGTGGACCGATCTCCATTATCAGGACACAAGGGGACGGCTTGCTGCATTGAAGAAGAGCATAAAGTTCGCTAGATTNCTGGGCAAGAGAAGCCAAGGAGATGAATATTCTGTTAATGCAGGCAGATACAACTTGAAACGGGCTGCAGAGATGGAGTTTNAGCTATATCAACAGCAANGATCACTCTTCCTTCATACAGAAAATGTCCTTATCCGTGAGAGCGCACAGCTTCATTCATCTCTTGTGAAGTTAAAGGNAATTCAGAGNGAACTGCAGGNCAGATCTCGn                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]




>consensus_534#0
GAATTTGGAGAAAAGTGCAGGTGGAATCAAGATTGTCCGGGTTGAAAAGGCTGTTGAGCC
AAGAAAAGAGTTTGATGAAACTGCAAAAGCAAGTGGTGGAGCGACACGAAACACATTGCC
CCTTTTTGATAGTATTGCCAAAGAGAATTTAATGAGGCCCTCAATTTTTCGGGAAACTAA
GATGCAGCACATGGCTGCTGAGGCAGCTGTGTTGCTATCCAAGGAATCCGATGACATGAG
GAGTTGTGCCATGTCATTAGGCTCATCTGGCTTGCATGATAAGGAGCAGGAGTCTTCGCT
GGAATCAGAAGGTGGCTGTGAAGAAGATGATGATGATGACATGGATAGTGAATACTTGGC
ATATACCAGAGATAGTACTAAAACGGCAACTAATGATGGTGAATGTCTTACTCAAGAGGA
GATGGCTGGATCATCAGGGAATCAGAAGCCACTATCTTCACTGGACTTCACAACAGGTTG
TGATGACATGCCATGTTCCGATGTCCATCACCATTCACTGGGAAATAGTGAACTGGAAAA
TGACGATACCACTAAGTCGTGTGCTTGTTCTTTCTGTCTTAAGGCTGCATTCATGTGGAC
CGATCTCCATTATCAGGACACAAGGGGACGGCTTGCTGCATTGAAGAAGAGCATAAAGTT
CGCTAGATTGCTGGGCAAGAGAAGCCAAGGAGATGAATATTCTGTTAATGCAGGCAGATA
CAACTTGAAACGGGTTGCAGAGATGGAGTTTGAGCTATATCAACAGCAAAGATCACTCTT
CCTTCATACAGAAAATGTCCTTATCCGTGAGAGCGCACAGCTTCATTCATCTCTTGTGAA
GTTAAAGGAATTCAGAGAGAACTGCAAGACAGATCTCGAGACGGCTAGCAGTTCGTTGTT
GGGAAAATGAATCTTTCATGGTTGTGCTGTTAAACTGCTTTTGCCTGGGATTCTTCAGAT
CAGCTGGGCCAGTTTGAGTCAAGTTGTGCATTGAGATTGGTTGATTGCTAGGAAGATTAG
TGGTTATTGCCAGTCAGGAAGTTTGGTTATAGTGATGGTACTACCTATATGCAGTGTTCA
GCATCTTTGTTTGTAAAAATCGTGTGGGAAGGTCGGAACTCCAAGTTAGCGACATGATTC
TCCTCAGTTGTAACTGGCAGTTAGCTTGCGCCATGTGGTATCTGTATGATGTTTCCTGCT
CCCAAGCATAATGGTGGAAGAACGATGATTTGACTTCTTTTTTTTCTTGCTTGCCGCCCC
TCAATGTTCAGGTCTGTTTGCTTACACTGGCTAACATGTAGTAAGTACTCTGCAGATTTG
CTGTTACTACGTGTACTATCCTTGACTTGCGTGAGCCGGCCGATGCCTGTATCGCTGTAA
CCACAAGCATTGTCAAGGATTTTCAATCTGATCTTTAACATTCTC
clustalw multiple alignements is not computed in this case