cluster # 5377

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Oryza sativa
cluster # 5377 cluster # 5377 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5377#0 length = 536 sequences # 3

consensusID : consensus_5377#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 536
fasta sequence

                              [GTTTTTTA-ACTTGTGTCAATATCACAACTTAGTGATCACTATGATTTTACAAAATGTTCATCAACCTGTAAATATGACTTTAAATCAGCGTATTGTATTAACGAGACAGTGTCCAATATTATCACTTCACCTAGAGTAATTCAACTTTACTTTCCCCTTTCCGCAAGACTAGGTCCTGTGATCATTGGCGACTAGGTGAAAGGCTTAATCTCGTCCTTACTGTTGAACTCATGGGTAGTAGATCCTGAGTAGCTGGTGGTGACATAGCTTCTATTCCCATCCCTTAGCTGCCACTCC-GTGATGTAACTCGGCTTCGTGACAACCTCAGCTACTTCAACTTCTCCGGTGAGCATTGCCACGACCTTCGACATTGGTGGTCGCTGGTGCGGCGAGCCCTGTGTGCAAAGGAGTGCAACCCGTATGACTCTGAGAGCTTCATCCTTATCATATTCCATAAGACTTGGGTCAACGATTCCGAGAGGTTGCTCTTTTTCATACAGGTCCCAGGCCCACTCAAAGAGATATATCTCCCTTTC]

[+] EMBL CB639099             [GTTTTTTA ACTTGTGTCAATATCACAACTTAGTGATCACTATGATTTTACAAAATGTTCATCAACCTGTAAATATGACTTTAAATCAGCGTATTGTATTAACGAGACAGTGTCCAATATTATCACTTCACCTAGAGTAATTCAACTTTACTTTCCCCTTTCCGCAAGACTAGGTCCTGTGATCATTGGCGACTAGGTGAAAGGCTTAATCTCGTCCTTACTGTTGAACTCATGGGTAGTAGATCCTGAGTAGCTGGTGGTGACATAGCTTCTATTCCCATCCCTTAGCTGCCACTCC GTGATGTAACTCGGCTTCGTGACAACCTCAGCTACTTCAACTTCTCCGGTGAGCATTGCCACGACCTTCGACATTGGTGGTCGCTGGTGCGGCGAGCCCTGTGTGCAAAGGAGTGCAACCCGTATGACTCTGAGAGCTTCATCCTTATCATATTCCATAAGACTTGGGTCAACGATTCCGAGAGGTTGCTCTTTTTCATACAGGTCCCAGGCCCACTCAAAGAGATATATCTC      ]
[+] EMBL CB639143             [GTATTTTATACTTGTGTCAATATCACAACTTAGTGATCACTATGATTTTACAAAATGTTCATCAACCTGTAAATATGACTTTAAATCAGCGTATTGTATTAACGAGACAGTGTCCAATATTATCACTTCACCTAGAGTAATTCAACTTTACTTTCCCCTTTCCGCAAGACTAGGTCCTGTGATCATTGGCGACTAGGTGAAAGGCTTAATCTCGTCCTTACTGTTGAACTCATGGGTAGTAGATCCTGAGTAGCTGGTGGTGACATAGCTTCTATTCCCATCCCTTAGCTGCCACTCC GTGATGTAACTCGGCTTCGTGACAACCTCAGCTACTTCAACTTCTCCGGTGAGCATTGCCACGACCTTCGACATTGGTGGTCGCTGGTGCGGCGAGCCCTGTGTGCAAAGGAGTGCAACCCGTATGACTCTGAGAGCTTCATCCTTATCATATTCCATAA                                                                               ]
[+] EMBL CB652635             [                                                                                                                           ccCTTCACCTAGAGTAATTCAACTTTACTTTCCCCTTTCCGCAAGACTAGGTCCTGTGATCATTGGCAACTAGGTGAAAGGCTTAATCTCGTCCTTACTGTTGAACTCATGGGTAGTAGATCCTGAGTAGCTGGTGGTGACATAGCTTCTATTCCCATCCCTTAGCTGCCACTCCGGTGATGTAACTCGGCTTTTTGTCAACCTCAGCTACTTCAACTTCTCCGGAGAGGATTGCCACAACCTTCGACATTGGTGGTCGCTGGTGCGGCGAGCCCTGTGTGCAGAGGAGTGCCACCCGTATGACTCTGAGAGCTTCATCCTTATCATATTCCATAAGACTTGGGCCAATGATTCCGAGAGGGAGCTCTTTTTCATACAGGGCCCATGCCCACTCATACAGATATATCTCCCTTTC]




>consensus_5377#0
GTTTTTTAACTTGTGTCAATATCACAACTTAGTGATCACTATGATTTTACAAAATGTTCA
TCAACCTGTAAATATGACTTTAAATCAGCGTATTGTATTAACGAGACAGTGTCCAATATT
ATCACTTCACCTAGAGTAATTCAACTTTACTTTCCCCTTTCCGCAAGACTAGGTCCTGTG
ATCATTGGCGACTAGGTGAAAGGCTTAATCTCGTCCTTACTGTTGAACTCATGGGTAGTA
GATCCTGAGTAGCTGGTGGTGACATAGCTTCTATTCCCATCCCTTAGCTGCCACTCCGTG
ATGTAACTCGGCTTCGTGACAACCTCAGCTACTTCAACTTCTCCGGTGAGCATTGCCACG
ACCTTCGACATTGGTGGTCGCTGGTGCGGCGAGCCCTGTGTGCAAAGGAGTGCAACCCGT
ATGACTCTGAGAGCTTCATCCTTATCATATTCCATAAGACTTGGGTCAACGATTCCGAGA
GGTTGCTCTTTTTCATACAGGTCCCAGGCCCACTCAAAGAGATATATCTCCCTTTC

clustalw multiple alignements is not computed in this case