These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_5400#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1976 fasta sequence [TCCAGAGATTATGTGCATCATGCAAATTAGTTTTGTTCTGTGCAGTAAGCTTATGGTTGTTCTGATTAAAGGATTCAATTCAACCCTGCGGCAAGGAAATGTTACTCATCATGAATATATACAGCTGGGTAAAGGACGTGATGTTGGAATGAATCAAATATCCAACTTTGAGGCCAAGGTGGCAAACGGAAATGGTGAACAAACACTCTGTCGAGATATTTATCGACTAGGGCACAGATTTGATTTCTACAGGATGTTGTCTCTATACTTCACTACAGTTGGTTTCTACTTCAATAGTATGGTGGCTGTTCTTACAGTGTATGTATTTTTATACGGGAGGTTATATCTTGTTTTGAGTGGCCTAGAGAAGTCAATTCTCCAGGATCCACAAATTAAGAACATCAAGCCCTTTGAAAATGCACTTGCAACTCAATCTATTTTCCAACTTGGAATGTTGCTCGTCCTCCCTATGATGATAGAGGTTGGCTTGGAGAAAGGATTTGGCAGAGCCTTGGGAGAGTTTGTAATAATGCAACTTCAATTAGCTTCTGTTTTCTTCACTTTCCATCTTGGAACGAAGACTCACTACTATGGAAGAACAATACTTCATGGTGGTGCAAAATATAGAGGTACAGGCCGGGGGTTTGTTGTGCGCCATGCAAAGTTTGCTGAGAATTACCGGATGTATTCCCGGAGCCACTTTGTGAAAGCACTGGAGCTACTCATTCTTTTGGTTGTCTATCTAGCTTATGGCATTTCGTACAGGAGCTCAAGTTTGTATCTATATGTCACAATTTCAATATGGTTCCTTGTTTTCTGTTGGCTGTTTGCACCTTTTGTCTTCAATCCATCATGCTTTGAGTGGCACAAGACTGTTGATGACTGGACTGACTGGTGGCATTGGATGAGCAATAGAGGAGGTATTGGCCTGGCACCAGAGCAAAGTTGGGAGGCTTGGTGGATAAGTGAACATGACCACCTGAGGAATGGTACAATACGTAGCCTGCTGTTGGAGTTCGTCCTCTCCCTTCGCTTCTTGATATACCAATATGGTATTGTTTATCATTTACACATAGTGCATGGGAACAGAAGCTTCATGGTGTATGCACTATCATGGCTGGTTATAGCTATAGTTCTT-GT-ATCACTTAAGGTCGTCTCAATGGGGAGAGAGAAGTTTATTACCAATTTTCAACTTGTATTCCGTATCCTCAAGGGCATTGTCTTTATTGTCCTCATCAGCTTGGTGGTCATATTATTTGTTGTTTTCAATCTGACTGTCTCTGATGTTGGTGCCAGTATTTTGGCATTCATCCCTACTGGCTGGTTTATTCTTCAGATTGCACAGCTCTGTGGACCATTGTTCCGGAGATTGGTGACGGAGCCGCTCTGCGCCCTGTTCTGTTCATGTTGCACCGGGGGCACCGCATGCAAGGGGCGTTGCTGCGCCAGGTTTAGGCTGAGGAGCCGGGATGTGCTCCGCAAGATCGGGCCATGGGACTCCATCCAGGAGATGGCGAGGATGTACGAGTACACCATGGGGATCCTCATCTTCTTCCCCATCGCCGT-CCTGTCGT-GGTTCCCCTTCGTCTCCGAGTTTCAGACTCGGCTGCTCTTCAGCCAGGCCTTCAGCCGGGGGCT-GCAGATCTCCAGGATCCTCACCGGCCAGAATGGTAGCGGCTCAAAGAGGGACTGATCATGATGAATATATGGGTTGTGCTTCTCTGCAGGTTTGACTAGTACAATCCGATGTAACTTTTCCTGGCACCGATATGGCGGTTCTGGGATTTATTTGTTTCTGGTTCCATCGTGTTCATATGAGGGCATGTGTGTAGTAGCCCCTATTGTTTTATTGCTTGGTTGCAGTGTTTGGGGAACAAAAAAACAATGAGAATGACGACCAGGATTTTCTATACCAAGGAATTTCATTTTCAGAGCCCAGTTGCTTCCNCCAATAATATTCTGTTTTATCTAAAAAA] [+] EMBL AK064446 [TCCAGAGATTATGTGCATCATGCAAATTAGTTTTGTTCTGTGCAGTAAGCTTATGGTTGTTCTGATTAAAGGATTCAATTCAACCCTGCGGCAAGGAAATGTTACTCATCATGAATATATACAGCTGGGTAAAGGACGTGATGTTGGAATGAATCAAATATCCAACTTTGAGGCCAAGGTGGCAAACGGAAATGGTGAACAAACACTCTGTCGAGATATTTATCGACTAGGGCACAGATTTGATTTCTACAGGATGTTGTCTCTATACTTCACTACAGTTGGTTTCTACTTCAATAGTATGGTGGCTGTTCTTACAGTGTATGTATTTTTATACGGGAGGTTATATCTTGTTTTGAGTGGCCTAGAGAAGTCAATTCTCCAGGATCCACAAATTAAGAACATCAAGCCCTTTGAAAATGCACTTGCAACTCAATCTATTTTCCAACTTGGAATGTTGCTCGTCCTCCCTATGATGATAGAGGTTGGCTTGGAGAAAGGATTTGGCAGAGCCTTGGGAGAGTTTGTAATAATGCAACTTCAATTAGCTTCTGTTTTCTTCACTTTCCATCTTGGAACGAAGACTCACTACTATGGAAGAACAATACTTCATGGTGGTGCAAAATATAGAGGTACAGGCCGGGGGTTTGTTGTGCGCCATGCAAAGTTTGCTGAGAATTACCGGATGTATTCCCGGAGCCACTTTGTGAAAGCACTGGAGCTACTCATTCTTTTGGTTGTCTATCTAGCTTATGGCATTTCGTACAGGAGCTCAAGTTTGTATCTATATGTCACAATTTCAATATGGTTCCTTGTTTTCTGTTGGCTGTTTGCACCTTTTGTCTTCAATCCATCATGCTTTGAGTGGCACAAGACTGTTGATGACTGGACTGACTGGTGGCATTGGATGAGCAATAGAGGAGGTATTGGCCTGGCACCAGAGCAAAGTTGGGAGGCTTGGTGGATAAGTGAACATGACCACCTGAGGAATGGTACAATACGTAGCCTGCTGTTGGAGTTCGTCCTCTCCCTTCGCTTCTTGATATACCAATATGGTATTGTTTATCATTTACACATAGTGCATGGGAACAGAAGCTTCATGGTGTATGCACTATCATGGCTGGTTATAGCTATAGTTCTT GT ATCACTTAAGGTCGTCTCAATGGGGAGAGAGAAGTTTATTACCAATTTTCAACTTGTATTCCGTATCCTCAAGGGCATTGTCTTTATTGTCCTCATCAGCTTGGTGGTCATATTATTTGTTGTTTTCAATCTGACTGTCTCTGATGTTGGTGCCAGTATTTTGGCATTCATCCCTACTGGCTGGTTTATTCTTCAGATTGCACAGCTCTGTGGACCATTGTTCCGGAGATTGGTGACGGAGCCGCTCTGCGCCCTGTTCTGTTCATGTTGCACCGGGGGCACCGCATGCAAGGGGCGTTGCTGCGCCAGGTTTAGGCTGAGGAGCCGGGATGTGCTCCGCAAGATCGGGCCATGGGACTCCATCCAGGAGATGGCGAGGATGTACGAGTACACCATGGGGATCCTCATCTTCTTCCCCATCGCCGT CCTGTCGT GGTTCCCCTTCGTCTCCGAGTTTCAGACTCGGCTGCTCTTCAGCCAGGCCTTCAGCCGGGGGCT GCAGATCTCCAGGATCCTCACCGGCCAGAATGGTAGCGGCTCAAAGAGGGACTGATCATGATGAATATATGGGTTGTGCTTCTCTGCAGGTTTGACTAGTACAATCCGATGTAACTTTTCCTGGCACCGATATGGCGGTTCTGGGATTTATTTGTTTCTGGTTCCATCGTGTTCATATGAGGGCATGTGTGTAGTAGCCCCTATTGTTTTATTGCTTGGTTGCAGTGTTTGGGGAACAAAAAAACAATGAGAATGACGACCAGGAT ] [+] EMBL AA751360 [ GAGTTCATCCTCTCCCTTCGCTTCTTGATATA CAATATGGTATTGTTTATCATTTACACATAGTGCATCGGAACAGAAGCTTCATGGTGTAT NACTATCATGGCTGGTTATAGCTATAGTTCTTCGTCATCACTTca ] [+] EMBL BQ906161 [ ATGCAAGGGGCGTTGCTGCGCCAGGTTTA GCTGAGGAGCCGGGATGTGCTCCGCAAGATC GGCCAT GGACTCCATCCAGGAGATGGCGAGGATGTACGAGTACACCATGGGGATCCTCATCTTCTTCCCCATC CCGTCCCTGTCGTGGGTTCCCCTTCNTTTCCGAGTTCCAGACTC GCTGCTCTTCAACCAAGCCTTCA CCCGGGGCTCGCAGATCTCCAGGATCCTCGCCGCCCAGAATGGTAGCGGCTCAAAGAGGGACTGATCATGATGAATATATGGGTTGTGCTTCTCTGCAGGTTTGACTAGTACAATCCGATGTAACTTTTCCTGGCACCGATATGCCGGTTCTGGGATTAATTTGTTTCTGGTTCCATCGTGTTCATATGAGGGCATGTGTGTAGTAGCCCCTATTGTTTTA TGCTT GTTCCAGT TTTGGGG AAAAAACCAATGAGAATGNCGACCAGGATTTTCTATACCAAGGAATTTCATTTTCAGAGCCCAGTTGCTTCCNCCAATAATATTCTGTTTTATCTAAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||