cluster # 5644

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Oryza sativa
cluster # 5644 cluster # 5644 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5644#0 length = 894 sequences # 3

consensusID : consensus_5644#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 894
fasta sequence

                              [CGGCAATTGCATAATTCTCATTGGGGAATGATGTGCCCTGCTGAAACACCTGAGGGACAAGCTTGTGGTTTGGTTAAAAATCTTGCATTGATGGTGTATATCACTGTTGGTTCTGCTGCAAATCCTATTTTGGAATTTTTGGAGGAGTGGGGCACAGAAAATTTTGAGGAGATATCACCAGCCGTCATTCCACAAGCTGCTAAAATTTTTGTCAACGGTTGTTGGGTTGGAATTCACAGGAACCCTGACCTGTTGGTGAAGACTCTTAGGCGTTTGAGAAGACAGATTGATGTCAACACTGAAGTTGGTGTGGTTCGTGATATTCGTCTTAAAGAACTCAGACTTTATACAGACTATGGGCGTTGCAGTCGTCCACTGTTTATTGTTGAAAACCAAAGGCTTCTTATTAAAAAGAGACATATCCGAGCGTTGCAGCAAAGGGAGACACCTGAGGAAGGTTGGCATGACTTAGTTGCGAAAGGATTTATTGAGTACATAGATACTGAAGAGGAAGAAACTACTATGATCTCCATGACCATTAATGACCTTATTGGTGCAAGACACAATCCAGAGGAGGCGTACTCTGAAACTTACACACATTGTGAGATTCATCCTTCATTGATACTTGGTGTCTGTGCCTCGATTATTCCTTTTCCAGATCATAACCAGTCACCTCGTAATACATATCAGTCTGCTATGGGAAAACAAGCAATGGGAATCTATGTTACCAACTATCAGTTAAGAATGGACACATTGGCCTATGTGCTATACTACCCACAAAAGCCTCTTGTTACTACTCGTGCTATGGAACATTTGCACTTCAAACAGTTACCAGCTGGCATT-AATGCAATTGTTGCTATTGCATGCTACTCTGGATATAATCAAGAAGATTCG]

[+] EMBL CB626787             [CGGCAATTGCATAATTCTCATTGGGGAATGATGTGCCCTGCTGAAACACCTGAGGGACAAGCTTGTGGTTTGGTTAAAAATCTTGCATTGATGGTGTATATCACTGTTGGTTCTGCTGCAAATCCTATTTTGGAATTTTTGGAGGAGTGGGGCACAGAAAATTTTGAGGAGATATCACCAGCCGTCATTCCACAAGCTGCTAAAATTTTTGTCAACGGTTGTTGGGTTGGAATTCACAGGAACCCTGACCTGTTGGTGAAGACTCTTAGGCGTTTGAGAAGACAGATTGATGTCAACACTGAAGTTGGTGTGGTTCGTGATATTCGTCTTAAAGAACTCAGACTTTATACAGACTATGGGCGTTGCAGTCGTCCACTGTTTATTGTTGAAAACCAAAGGCTTCTTATTAAAAAGAGACATATCCGAGCGTTGCAGCAAAGGGAGACACCTGAGGAAGGTTGGCATGACTTAGTTGCGAAAGGATTTATTGAGTACATAGATACTGAAGAGGAAGAAACTACTATGATCTCCATGACCATTAATGACCTTATTGGTGCAAGACACAATCCAGAGGAGGCGTACTCTGAAACTTACACACATTGTGAGATTCATCCTTCATTGATACTTGGTGTCTGTGCCTCGATTATTCCTTTTCCAGATCATAACCAGTCACCTCGTAATACATATCAGTCTGCTATGGGAAAACAAGCAATGGGAATCTATGTTACCAACTATCAGTTAAGAATGGACACATTGGCCTATGTGCTATACTACCCACAAAAGCCTCTTGTTACTACTCGTGCTATGGAACATTTGCACTTCAAACAGTTACCAGCTGGCATT AATGCAATTGTTGCTATTGCATGCTACTCT                     ]
[+] EMBL CB627803             [                                                                                      ATTGATGGTGTATATCACTGTTGGTTCTGCTGCAAATCCTATTTTGGAATTTTTGGAGGAGTGGGGCACAGAAAATTTTGAGGAGATATCACCAGCCGTCATTCCACAAGCTGCTAAAATTTTTGTCAACGGTTGTTGGGTTGGAATTCACAGGAACCCTGACCTGTTGGTGAAGACTCTTAGGCGTTTGAGAAGACAGATTGATGTCAACACTGAAGTTGGTGTGGTTCGTGATATTCGTCTTAAAGAACTCAGACTTTATACAGACTATGGGCGTTGCAGTCGTCCACTGTTTATTGTTGAAAACCAAAGGCTTCTTATTAAAAAGAGACATATCCGAGCGTTGCAGCAAAGGGAGACACCTGAGGAAGGTTGGCATGACTTAGTTGCGAAAGGATTTATTGAGTACATAGATACTGAAGAGGAAGAAACTACTATGATCTCCATGACCATTAATGACCTTATTGGTGCAAGACACAATCCAGAGGAGGCGTACTCTGAAACTTACACACATTGTGAGATTCATCCTTCATTGATACTTGGTGTCTGTGCCTCGATTATTCCTTTTCCAGATCATAACCAGTCACCTCGTAATACATATCAGTCTGCTATGGGAAAACAAGCAATGGGAATCTATGTTACCAACTATCAGTTAAGAATGGACACATTGGCCTATGTGCTATACTACCCACAANAGCCTCTTGTTACTACTCGTGCTATGGAACATTTGCACTTCAGACAGTTACCAGCTGGCATTAAATGC ATTGTTGCTATTGCATGCTACTCTGGATATAATCAAGAAGATTCG]
[+] EMBL CB629275             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                    GGAACGTTGGCATGACTTACTTGCGAAAGGATTTATTGAGTACATATATACTGAAAAGGAAGAAACTACTATGATCTCCATGACCATTAATGACCTTATTGGTGCTAGACACCATCCAAATGATGCGTACTCTGAAACTTACACACATTGAGAGATTCATCCTTCATTGATACTTGGCGTCTGTGCCTCAATTATTCCTTTTCCACATCATAACCAGTCACCTCCTAATACATATCAGACTGCTATGGTAAAACATCCAATGGGAATCTATGTTACCAACTATCAGATAAGAATGGACACATTGGTCTATGTGCTA                                                                                                                               ]




>consensus_5644#0
CGGCAATTGCATAATTCTCATTGGGGAATGATGTGCCCTGCTGAAACACCTGAGGGACAA
GCTTGTGGTTTGGTTAAAAATCTTGCATTGATGGTGTATATCACTGTTGGTTCTGCTGCA
AATCCTATTTTGGAATTTTTGGAGGAGTGGGGCACAGAAAATTTTGAGGAGATATCACCA
GCCGTCATTCCACAAGCTGCTAAAATTTTTGTCAACGGTTGTTGGGTTGGAATTCACAGG
AACCCTGACCTGTTGGTGAAGACTCTTAGGCGTTTGAGAAGACAGATTGATGTCAACACT
GAAGTTGGTGTGGTTCGTGATATTCGTCTTAAAGAACTCAGACTTTATACAGACTATGGG
CGTTGCAGTCGTCCACTGTTTATTGTTGAAAACCAAAGGCTTCTTATTAAAAAGAGACAT
ATCCGAGCGTTGCAGCAAAGGGAGACACCTGAGGAAGGTTGGCATGACTTAGTTGCGAAA
GGATTTATTGAGTACATAGATACTGAAGAGGAAGAAACTACTATGATCTCCATGACCATT
AATGACCTTATTGGTGCAAGACACAATCCAGAGGAGGCGTACTCTGAAACTTACACACAT
TGTGAGATTCATCCTTCATTGATACTTGGTGTCTGTGCCTCGATTATTCCTTTTCCAGAT
CATAACCAGTCACCTCGTAATACATATCAGTCTGCTATGGGAAAACAAGCAATGGGAATC
TATGTTACCAACTATCAGTTAAGAATGGACACATTGGCCTATGTGCTATACTACCCACAA
AAGCCTCTTGTTACTACTCGTGCTATGGAACATTTGCACTTCAAACAGTTACCAGCTGGC
ATTAATGCAATTGTTGCTATTGCATGCTACTCTGGATATAATCAAGAAGATTCG

clustalw multiple alignements is not computed in this case