These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6741#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1372 fasta sequence [AGCTTTTTGCTTCTGCAATTCTCTCTCCTCCCAAATCGCGAGCTCGTCGGAAGCTAGGGCCTCCCGCTCCGATCAGATCGCCGCGCCGCCGCTGCTCCAGGGTACCTCAAAAATAGAAGATGCAAGGGGGGAGAGGCAGGAGGGATGGTTTCTTCGGTTTTGGGGACCCCTTTCCAGGTTTGGGTAGCTTTGGACAACCAGGGAGCCTAATGTCAAGTTTCTTTGGTGGGGCAAATCCCTTTGATGATCCTTTCTTCACAAACCCTTTC-GGT-GCTATGAT--GGGACCTAGC-TTGTT-ACA-GCC-AAGCATG-TTTGGGAGCTTTGGGTCAAGCATGTTTGGGCCTCATGGAAATGTCAATGGACTGAGCAATACTGGAGGCTTCCTTCAGCAAGCTCCTGAACCAAGCAGGCCGAGAGGGCCAATAATCCAGGAGCTATCTTCAGATGATGAGGATGGCGCAGATGTGAATAAAGAAGATGAGAAGAGGAATGATAACCCTAGGAAGCATCCAAGGATGGCCCGAATGCCATATGTGGAGGATCCTGACGAAGATACTGAAGATAATAAAAGATCTAGGCACGAGCAGTTTGAAAGGGGGTATGCCAGAGCCAGCACATCGCGTCCACAACCTCATACATTTATGTTTCAGAGCTCAACTGTTACGTATGGCGGTCCAAATGGAGCTTGTTACACGTCTTCAGCCACTAGGAGGACTGGTGGAGATGGAGTTACA-TTTGAAGAAAGGAAGGAAGCAGACACGACCACTGGTAAAGCCACTCACAGGA-TTTCACGTGGAATTGGCAATAAGGGCCATTCATTGACAAGGAAACTGAGTTCTGAT-GGGAACGTTGACACGATGCAAACTTTGCACAACTTGAATGAAGATGAGCTTGCTCGATTTGAGGAATCGTGGCAGAGAAATGCAGTGCAAAATCTGTCTGGTTGGGATCCCAGAGTGAACATGCTTGGCACTGGAACTGCTCGTTCTGGCATCCGAGATGGGAATCAGATGCTTACGCTTCCAGCACCTGGCCCTGGTCAATCCCGTGGCGCCAGTTCTTCTAGGACGAAGAGGCCCACCCAGAACACATCTTCCCGCCGCACTTAGTTCCCCAGTAGTATATGCAACATACTGTTTCCACCCAAAACAAATGTAACTCGTGCTCACCTTGGCAAATGATCTGTTAGTATAGTACTTTTGTGTCGTTTCTATGCTCAGCTTGCATGCAGAGCTACACGGGAAATGTAAGAAAAGAAAACCTGCACTTTACCCAGGTTGGTCTCTTTGTGACCAAAACTGTCAGTCTGTCACTTGCTGGACTAAGCAATGGTACTTGCTCTTAACTCTCTTTGGAGACTTCCTAAAAAAAAAAA] [+] EMBL AK102753 [AGCTTTTTGCTTCTGCAATTCTCTCTCCTCCCAAATCGCGAGCTCGTCGGAAGCTAGGGCCTCCCGCTCCGATCAGATCGCCGCGCCGCCGCTGCTCCAGGGTACCTCAAAAATAGAAGATGCAAGGGGGGAGAGGCAGGAGGGATGGTTTCTTCGGTTTTGGGGACCCCTTTCCAGGTTTGGGTAGCTTTGGACAACCAGGGAGCCTAATGTCAAGTTTCTTTGGTGGGGCAAATCCCTTTGATGATCCTTTCTTCACAAACCCTTTC GGT GCTATGAT GGGACCTAGC TTGTT ACA GCC AAGCATG TTTGGGAGCTTTGGGTCAAGCATGTTTGGGCCTCATGGAAATGTCAATGGACTGAGCAATACTGGAGGCTTCCTTCAGCAAGCTCCTGAACCAAGCAGGCCGAGAGGGCCAATAATCCAGGAGCTATCTTCAGATGATGAGGATGGCGCAGATGTGAATAAAGAAGATGAGAAGAGGAATGATAACCCTAGGAAGCATCCAAGGATGGCCCGAATGCCATATGTGGAGGATCCTGACGAAGATACTGAAGATAATAAAAGATCTAGGCACGAGCAGTTTGAAAGGGGGTATGCCAGAGCCAGCACATCGCGTCCACAACCTCATACATTTATGTTTCAGAGCTCAACTGTTACGTATGGCGGTCCAAATGGAGCTTGTTACACGTCTTCAGCCACTAGGAGGACTGGTGGAGATGGAGTTACA TTTGAAGAAAGGAAGGAAGCAGACACGACCACTGGTAAAGCCACTCACAGGA TTTCACGTGGAATTGGCAATAAGGGCCATTCATTGACAAGGAAACTGAGTTCTGAT GGGAACGTTGACACGATGCAAACTTTGCACAACTTGAATGAAGATGAGCTTGCTCGATTTGAGGAATCGTGGCAGAGAAATGCAGTGCAAAATCTGTCTGGTTGGGATCCCAGAGTGAACATGCTTGGCACTGGAACTGCTCGTTCTGGCATCCGAGATGGGAATCAGATGCTTACGCTTCCAGCACCTGGCCCTGGTCAATCCCGTGGCGCCAGTTCTTCTAGGACGAAGAGGCCCACCCAGAACACATCTTCCCGCCGCACTTAGTTCCCCAGTAGTATATGCAACATACTGTTTCCACCCAAAACAAATGTAACTCGTGCTCACCTTGGCAAATGATCTGTTAGTATAGTACTTTTGTGTCGTTTCTATGCTCAGCTTGCATGCAGAGCTACACGGGAAATGTAAGAAAAGAAAACCTGCACTTTACCCAGGTTGGTCTCTTTGTGACCAAAACTGTCAGTCTGTCACTTGCTGGACTAAGCAATGGTACTTGC ] [+] EMBL CA767081 [ TGCTTCTGCAATTCTCTCTCCTCCCAAATCGCGAGCTCGTCGGAAGCTAGGGCCTCCCGCTCCGATCAGATCGCCGCGCCGCCGCTGCTCCAGGGTACCTCAAAAATAGAAGATGCGAGGGGGGAGAGGCAGGAGGGATGGTTTCTTCGGTTTTGGGGACCCCTTTCCAGGTTTGGGTAGCTTTGGACAACCAGGGAGCCTAATGTCAAGTTTCTTTGGTGGGGCAAATCCCTTTGATGATCCTTTCTTCACAAACCCTTTC GGT GCTATGAT GGGACCTAGC TTGTT ACA GCC AAGCATG TTTGGGAGCTTTGGGTCAAGCATGTTTGGGCCTCATGGAAATGTCAATGGACTGAGCAATACTGGAGGCTTCCTTCAGCAAGCTCCTGAACCAAGCAGGCCGAGAGGGCCAATAATCCAGGAGCTATCTTCAGATGATGAGGATGGCGCAGATGTGAATAAAGAAGATGAGAAGAGGAATGATAACCCTAGGAAGCATCCAAGGATGGCCCAAATGCCATATGTGGAGGATCCTGACGAAGATACTGAAGATAATAAAAGATCTAGGCACGAGCAGTTTGAAAGGGGGTATGCCAGAGCCAGCACATCGCGTCCACAACCTCATACATTTATGTTTCAGAGCTCAACTGGTACGTATGGCGGTCCAAATGGAGCTTGGTACACGTCTTCAGCCACTAGGAGGACTGGTGGAGATGGAGTTACATTTTGAAGAAAGGAAGGAAGCAGACNCGACCACTGGTAAAGCCACTCACAGGATTTTCACGNGGNATTGGCAATAAGGGCCATTCATTGACAAGGAAACTGAGTTCTGATGGGGAACGTTGACACGATGCAAACTTTGCCCAACTTGNATGAAAATGA ] [+] EMBL D42909 [ TCTGCAATTCTCTCTCCTCCCAAATCGCGAGCTCGTCGGAAGCTAGGGCCTCCCGCTCCGATCAGATCGCCGCGCCGCCGCTGCTCCAGGGTACCTCAAAAATAGAAGATGCAAGGGGGGAGAGGCAGGAGGGATGGTTTCTTCGGTTTTGGGGACCCCTTTCCAGGTTTGGGTAGCTTTGGACAACCAGGGAGCCTAATGTCAAGTTTCTTTGGTGGGGCAAATCCCTTTGATGATCCTTTCTTCACAAACCCTTTCGGGTGGCTATGATGGGGGACCTAGCTTTGTTAACAGGCCAAAGCATGTTTTGGNAGCTTT ] [+] EMBL CA763675 [ TGGAATTGGCAATAAGGGCCATTCATTGACAAGGAAACTGAGTTCTGAT GGGAACGTTGACACGATGCAAACTTTGCACAACTTGAATGAAGATGAGCTTGCTCGATTTGAGGAATCGTGGCAGAGAAATGCAGTGCAAAATCTGTCTGGTTGGGATCCCAGAGTGAACATGCTTGGCACTGGAACTGCTCGTTCTGGCATCCGAGATGGGAATCAGATGCTTACGCTTCCAGCACCTGGCCCTGGTCAATCCCGTGGCGCCAGTTCTTCTAGGACGAAGAGGCCCACCCAGAACACATCTTCCCGCCGCACTTAGTTCCCCAGTAGTATATGCAACATACTGTTTCCACCCAAAACAAATGTAACTCGTGCTCACCTTGGCAAATGATCTGTTAGTATAGTACTTTTGTGTCGTTTCTATGCTCAGCTTGCATGCAGAGCTACACGGGAAATGTAAGAAAAGAAAACCTGCACTTTACCCAGGTTGGTCTCTTTGTGACCAAAACTGTCAGTCTGTCACTTGCTGGACTAAGCAATGGTACTTGCTCTTAACTCTCTTTGGAGACTTCCTAAAAAAAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||