cluster # 7481

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 7481 cluster # 7481 Sequences # 4 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_7481#0 length = 744 sequences # 4

consensusID : consensus_7481#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 744
fasta sequence

                              [CTCGGCCGTCTCAAACCCGAAGAGAAAAGAAGTCGTCAAGCCGTCGACTTGTTCGGTTGTTTGCCTTGCCCACCGAGCCTCCCGCAGCTGTCTCGCTCGCGGTTTTTCTACTCCATCTCGCCTCCGCGGCTCCGCCTCGCGTCGCTCGCCATGGGCAAGTCCAGATCCGGGGTGCTGCTGGCGCTGCTCCTGGTCTGCGCCGCGGTGGCGGCGGCGGCGGCTGCTGCCGTACCGGGCAGCAAGGGGAAGGGCGGGGCGGGTCGGGCGGAGGTGGCGTGCTCGGATCTGGCGACGCGGGGGGAGTGCGTGGCGAGCGGCGGCGGGAGCAGGTGCCGGTGGTGCCGCAGCGAGGCGCTCGATGACATGTGCTTTGGGGCCGCCGAGGCGTGGAGGCTGCCCAACCAGGTGTTCTCTTGCGA-CCCGCCCGCCGGCGGCGTCGCCCACGCCCGGAGATGACGATGC-AGCCTAGGCGGCCACTGCTGTCGTCTTGCTCGCGATTAATCTGTTGTACCCTCTCCCCCTCTGTTCTCGTTGGATTTGAGAATTTAAGAACTACTGTTTCCTGGTGTTAAGTACTCCAGATCCTTGGATGCCACATAGACGATTTTCCACTCTACTTTTCTGTAATGTATGTTTTGATCAGAAATCTGCCGATCGATTTTATTGATTGTTGATGCTTGATACCGACTCTTTCAAGATTTGCAATTTGAGTTGAGTAATCTGCGACAAAATTTGAGTTAGCGG]

[+] EMBL AK064140             [CTCGGCCGTCTCAAACCCGAAGAGAAAAGAAGTCGTCAAGCCGTCGACTTGTTCGGTTGTTTGCCTTGCCCACCGAGCCTCCCGCAGCTGTCTCGCTCGCGGTTTTTCTACTCCATCTCGCCTCCGCGGCTCCGCCTCGCGTCGCTCGCCATGGGCAAGTCCAGATCCGGGGTGCTGCTGGCGCTGCTCCTGGTCTGCGCCGCGGTGGCGGCGGCGGCGGCTGCTGCCGTACCGGGCAGCAAGGGGAAGGGCGGGGCGGGTCGGGCGGAGGTGGCGTGCTCGGATCTGGCGACGCGGGGGGAGTGCGTGGCGAGCGGCGGCGGGAGCAGGTGCCGGTGGTGCCGCAGCGAGGCGCTCGATGACATGTGCTTTGGGGCCGCCGAGGCGTGGAGGCTGCCCAACCAGGTGTTCTCTTGCGA CCCGCCCGCCGGCGGCGTCGCCCACGCCCGGAGATGACGATGC AGCCTAGGCGGCCACTGCTGTCGTCTTGCTCGCGATTAATCTGTTGTACCCTCTCCCCCTCTGTTCTCGTTGGATTTGAGAATTTAAGAACTACTGTTTCCTGGTGTTAAGTACTCCAGATCCTTGGATGCCACATAGACGATTTTCCACTCTACTTTTCTGTAATGTATGTTTTGATCAGAAATCT                                                                                               ]
[+] EMBL OSC20493             [                                                                                   GCAGCTGTCTCGCTCGCGGTTTTTCTACTCCATCTAGCCTCCGCGGCTCCGCCTCGCGTAGCTCGCCATGGGCAAGTCCAGATCCGGGGTGCTGCTGGCGCTGCTCCTGGTCTGCGCCGCGGTGGCGNGGACGGCGGCTGCTGCCGTACCGGGCAGCAAGGGGAAGGGCGGGGCGGGTCGGGCGGAGGTGGCGTGCTCGGATCTGGCGACGCGGGGGGAGTGCGTGGCGAGCGNCGGCGNGAGCAGGTGCCGGTGGTGCCGCAACGAGGCGCTCGATGACATGTGCTTTGGGGCCGCCGAGGCGTGGAGGCTTCCCAACCAGGTGTTCTCTTGCGA  CCGNCCGCCG  AGCGTCG CCACGNCCGGAGATGACGATGC AG CTAGGCGGCCACTG TGTCGTC                                                                                                                                                                                                                                                                 ]
[+] EMBL AU225690             [                                                                                                                                                                                                                                                                                                                     gccgctGGCGGCGGGAGCAGGTGCCGGTGGTGCCGCAGCGAGGCGCTCGATGACATGTGCTTTGGGGCCGCCGAGGCGTGGAGGCTGCCCAACCAGGTGTTCTCTTGCGA CCCGCCCGCCGGCGGCGTCGCCCACGCCCGGAGATGACGATGC AGCCTAGGCGGCCACTGCTGTCGTCTTGCTCGCGATTAATCTGTTGTACCCTCTCCCCCTCTGTTCTCGTTGGATTTGAGAATTTAAGAACTACTGTTTCCTGGTGTTAAGTACTCCAGATCCTTGGATGCCACATAGACGATTTTCCACTCTACTTTTCTGTAATGTATGTTTTGATCAGAAATCTGCCGATCGATTTTATTGATTGTTGATGCTTGATACCGACTCTTTCAAGATTTGCAATTTGAGTTGAGTAATCTGCGACAAAATTTGAGTTAGCGG]
[-] EMBL OSC100611            [                                                                                                                                                                                                                                                                                                                                                                                                                   AGGTGNTNTCTTGCGACCCCGCCC CCGGCGGCGTCNCCCACGCCCGGAGATGACGATGCAAGCCTAGGCGGCNACTGCTGTCGTCTTGCTCGCGATTAATCTGTTGTACCCTCTCCCCCTCTGTTCTCGTTGGATTTGAGAATTTAAGAACTACTGTTTCCTGGTGTTAAGTACTCCAGATCCTTGGATGCCACATAGACGATTTTCCACTCTACTTTTCTGTAATGTATGTTTTGATCAGAAATCTGCCGATCGATTTTATTGATTGTTGATGNTTGATATCGA                                                         ]




>consensus_7481#0
CTCGGCCGTCTCAAACCCGAAGAGAAAAGAAGTCGTCAAGCCGTCGACTTGTTCGGTTGT
TTGCCTTGCCCACCGAGCCTCCCGCAGCTGTCTCGCTCGCGGTTTTTCTACTCCATCTCG
CCTCCGCGGCTCCGCCTCGCGTCGCTCGCCATGGGCAAGTCCAGATCCGGGGTGCTGCTG
GCGCTGCTCCTGGTCTGCGCCGCGGTGGCGGCGGCGGCGGCTGCTGCCGTACCGGGCAGC
AAGGGGAAGGGCGGGGCGGGTCGGGCGGAGGTGGCGTGCTCGGATCTGGCGACGCGGGGG
GAGTGCGTGGCGAGCGGCGGCGGGAGCAGGTGCCGGTGGTGCCGCAGCGAGGCGCTCGAT
GACATGTGCTTTGGGGCCGCCGAGGCGTGGAGGCTGCCCAACCAGGTGTTCTCTTGCGAC
CCGCCCGCCGGCGGCGTCGCCCACGCCCGGAGATGACGATGCAGCCTAGGCGGCCACTGC
TGTCGTCTTGCTCGCGATTAATCTGTTGTACCCTCTCCCCCTCTGTTCTCGTTGGATTTG
AGAATTTAAGAACTACTGTTTCCTGGTGTTAAGTACTCCAGATCCTTGGATGCCACATAG
ACGATTTTCCACTCTACTTTTCTGTAATGTATGTTTTGATCAGAAATCTGCCGATCGATT
TTATTGATTGTTGATGCTTGATACCGACTCTTTCAAGATTTGCAATTTGAGTTGAGTAAT
CTGCGACAAAATTTGAGTTAGCGG

clustalw multiple alignements is not computed in this case