These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7537#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1823 fasta sequence [TTGTTTCTCAGCTTCCCAAAGTTAGACAAACATTGCTGTTCTCTGCCACACAAACAAAATCAGTTAAGGACCTTGCAAGGGTTAGCCTGAAGGATCCTGAATATATAAGTGTGCATGAGGAGGCTACAACAGCTACTCCTGATACCCTTGAGCAGTATGCCATGATTGTGCCTCTTGAACAGAAGCTAAATATGCTCTGGAGTTTCATCAAACGTCATCTAAAGTCAAGAATACTAGTATTCTTATCCAGTGTCAAGCAGGTAAAATTTGTGTATGAAGTTTTCAAGAAGCTCCGTCCTGGTATTTCTTTGAGATGCATGCATGGACGGATGAAATACGAAGTACAGCAGGCCATAGTAGCAGAGTTCAAAGAGGGACACTCGGTTCTATTCTCAACTGATATATTTGCTAGAGGATTGGATATAGAGGATGTTGATTGGGTCGTACAAGTTGATTGCCCAGAAAACATTGCTCTGTACATCCACAGAGTTGGCCGTACAGCTCGTTATAACAAGAGAGGAAAAGCTCTTATCTTCCTTTGTCCAGAGGAAGAGAAAATGCTTGAAAAATTGAAGGCAGCTGAAAGTAAAATACCTATACATATTAAAAAGCCAAACACAGAACAACTGCAGCAGATATCTCAGAATATAGCGTCAGTGCTGGTGCAATATCCCAATTTGCAGCAACTGGGTAAAAGGGCTTTTGTCACCTATCTGAAGTCAGTGTACCTCCAGAGCGACAAAGAGGTGTTTGATCTGAGCAGGTTCTCTATGGAGAATTTTGCCGCATATGCTGCTTCTCTTGGTCTTCCTGTTACCCCAAAGATTCGTTTTGTTAGCCACAAAAAGAATGTGCCAAAGAAATATATGGGGGATATTGATGTGAAACGGATGAAAAGAAGTTCCAAACCTGAAGTTATAGAAATTAATCCACAGGCCAAAAGTAACTTAATTGAGGATGATGGAGATTATGATATCCTTTATCCCAAGGAGCAGCAAACAGATGTAAATATGGCTGATGGTCTTGATGATGTCCTTTATCCCAAGGTGTCCACTGCAGATACAAATAATGAACCAGAGAAAGTCACACAGTTGGGAAATAAGTCCGTGAAAAAGAAGAAGCTGAAGATAAACGTGCATAGGCCATTGGGCACAAGGGTCAAATTTGACGATGAAGGCCACACTATCCCTCCTTTTGCATCCATAGCTGAGGAAGTGGGCTCAGGAGATGTAATTGACAAGGATAAAATTTCCCAGAGGTACGCAGAGATGTTGAGAGAGATGCAGGAGCATGACAAGGAGGACAAGCTCGAACACAAGAGGATCTTGCGCGAGAAGAAGCTACAGAAGAAGCTGAAGCTCAAGCGCAAGAGGAATGAGGAAATGGACGCAGGGTCAGAGAACAGTGGCTCGGAGTCGGACAGAGACCAGAGGACTGCCTCCAAGGGTAAGAAGAGGTACTTCAACAGCGATGACGAAGAAGGCAGCAAAGATGCGGCGAAGGATGGGGATGTTCTCGCTCAACAGGAGGCGTTGGCCCTGAAGCTTTTGAGTAAAATGCACAGTTAATTTAATGGTTTTGTACCGCGTGATGTTAATGTAGGCAGCTCTCTGCAACCGGAGAGTGAAATTTTGATCAGTGCTAGTCTAGTTCCCCGGGAGTTGATATATGCATAGGATCTGGAAATGTACCAGATTCTGTCATTCTAGTCGTACGTCGAGAATTTTGATGGAAAACATGGTGTTACTATATTATGTACTTACCGTTGAGGGTATTGTAATTTCCATTTATTATATACACAAATGTTTTGCTCAAAAAAAAAA] [+] EMBL AK064167 [TTGTTTCTCAGCTTCCCAAAGTTAGACAAACATTGCTGTTCTCTGCCACACAAACAAAATCAGTTAAGGACCTTGCAAGGGTTAGCCTGAAGGATCCTGAATATATAAGTGTGCATGAGGAGGCTACAACAGCTACTCCTGATACCCTTGAGCAGTATGCCATGATTGTGCCTCTTGAACAGAAGCTAAATATGCTCTGGAGTTTCATCAAACGTCATCTAAAGTCAAGAATACTAGTATTCTTATCCAGTGTCAAGCAGGTAAAATTTGTGTATGAAGTTTTCAAGAAGCTCCGTCCTGGTATTTCTTTGAGATGCATGCATGGACGGATGAAATACGAAGTACAGCAGGCCATAGTAGCAGAGTTCAAAGAGGGACACTCGGTTCTATTCTCAACTGATATATTTGCTAGAGGATTGGATATAGAGGATGTTGATTGGGTCGTACAAGTTGATTGCCCAGAAAACATTGCTCTGTACATCCACAGAGTTGGCCGTACAGCTCGTTATAACAAGAGAGGAAAAGCTCTTATCTTCCTTTGTCCAGAGGAAGAGAAAATGCTTGAAAAATTGAAGGCAGCTGAAAGTAAAATACCTATACATATTAAAAAGCCAAACACAGAACAACTGCAGCAGATATCTCAGAATATAGCGTCAGTGCTGGTGCAATATCCCAATTTGCAGCAACTGGGTAAAAGGGCTTTTGTCACCTATCTGAAGTCAGTGTACCTCCAGAGCGACAAAGAGGTGTTTGATCTGAGCAGGTTCTCTATGGAGAATTTTGCCGCATATGCTGCTTCTCTTGGTCTTCCTGTTACCCCAAAGATTCGTTTTGTTAGCCACAAAAAGAATGTGCCAAAGAAATATATGGGGGATATTGATGTGAAACGGATGAAAAGAAGTTCCAAACCTGAAGTTATAGAAATTAATCCACAGGCCAAAAGTAACTTAATTGAGGATGATGGAGATTATGATATCCTTTATCCCAAGGAGCAGCAAACAGATGTAAATATGGCTGATGGTCTTGATGATGTCCTTTATCCCAAGGTGTCCACTGCAGATACAAATAATGAACCAGAGAAAGTCACACAGTTGGGAAATAAGTCCGTGAAAAAGAAGAAGCTGAAGATAAACGTGCATAGGCCATTGGGCACAAGGGTCAAATTTGACGATGAAGGCCACACTATCCCTCCTTTTGCATCCATAGCTGAGGAAGTGGGCTCAGGAGATGTAATTGACAAGGATAAAATTTCCCAGAGGTACGCAGAGATGTTGAGAGAGATGCAGGAGCATGACAAGGAGGACAAGCTCGAACACAAGAGGATCTTGCGCGAGAAGAAGCTACAGAAGAAGCTGAAGCTCAAGCGCAAGAGGAATGAGGAAATGGACGCAGGGTCAGAGAACAGTGGCTCGGAGTCGGACAGAGACCAGAGGACTGCCTCCAAGGGTAAGAAGAGGTACTTCAACAGCGATGACGAAGAAGGCAGCAAAGATGCGGCGAAGGATGGGGATGTTCTCGCTCAACAGGAGGCGTTGGCCCTGAAGCTTTTGAGTAAAATGCACAGTTAATTTAATGGTTTTGTACCGCGTGATGTTAATGTAGGCAGCTCTCTGCAACCGGAGAGTGAAATTTTGATCAGTGCTAGTCTAGTTCCCCGGGAGTTGATATATGCATAGGATCTGGAAATGTACCAGATTCTGTCATTCTAGTCGTACGTCGAGAATTTTGATGGAAAACATGGTGTTACTATATTATGTACTTACCGTTGAGGGTATTGTAATTTCCATTTATTATATACACAAATGTTTTGC ] [-] EMBL CA762446 [ CATT GGCACCAGGGTC AATTTGACGATGAAGCCCCCCCTATCCCTCCTTTGGCATCCATAGGTGAAGAAGTGGGCTCAGGAGATGTAATTTCCAAGGATAAAATTTCCCACAGGTACGAAGAGATGTTTAGAGAGATGCAGGAGCATGACAAGGAGGACAAGCTCGAACACAAGAGGATCTTGCGCGAGAAGAAGCTACAGAAGAAGCTGAAGCTCAAGCGCAAGAGGAATGAGGAAATGGACGCAGGGTCAGAGAACAGTGGCTCGGAGTCGGACAGAGACCAGAGGACTGCCTCCAAGGGTAAGAAGAGGTACTTCAACAGCGATGACGAAGAAGGCAGCAAAGATGCGGCGAAGGATGGGGATGTTCTCGCTCAACAGGAGGCGTTGGCCCTGAAGCTTCTGAGTAAAATGCACAGTTAATTTAATGGTTTTGTACCGCGTGATGTTAATGTAGGCAGCTCTCTGCAACCGGAGAGTGAAATTTTGATCAGTGCTAGTCTAGTTCCCCGGGAGTTGATATATGCATAGGATCTGGAAATGTACCAGATTCTGTCATTCTAGTCGTACGTCGAGAATTTTGATGGAAAACATGGTGTTACTATATTATGTACTTACCGTTGAGGGTATTGTAATTTCCATTTATTATATACACAAATGTTTTGCTCAAAAAAAAAA] [+] EMBL CA764590 [ CGAACACAAGAGGATCTTGCGCGAGAAGAAGCTACAGAAGAAGCTGAAGCTCAAGCGCAAGAGGAATGAGGAAATGGACGCAGGGTCAGAGAACAGTGGCTCGGAGTCGGACAGAGACCAGAGGACTGCCTCCAAGGGTAAGAAGAGGTACTTCAACAGCGATGACGAAGAAGGCAGCAAAGATGCGGCGAAGGATGGGGATGTTCTCGCTCAACAGGAGGCGTTGGCCCTGAAGCTTTTGAGTAAAATGCACAGTTAATTTAATGGTTTTGTACCGCGTGATGTTAATGTAGGCAGCTCTCTGCAACCGGAGAGTGAAATTTTGATCAGTGCTAGTCTAGNTCCCCGGGAGTTGATATATGCATAGGATCTGGAAATGTACCAGATTCTGTCATTCTAGTCGTACGTCGAGAATTTTGATGGAAAACATGGTGTTACTATATTATGTACTTACCGTTGAGGGTATTGTAATTTCCATTTAT ] [-] EMBL CB637586 [ GAGAAGAAGCAACAGAAGAAGTTGAAGCTCAAGCGCAAGAGGAAGGAGGAAAGGGACGCAGGGTCAGAGAACAGTGGCTCGGAGTCGGACAGAGACCAGAGGACTGCCTCCAAGGGTAAGAAGAGGTACTTCAACAGCGATGACGAAGAAGGCAGCAAAGATGCGGCGAAGGATGGGGATGTTCTCGCTCAACAGGAGGCGTTGGCCCTGAAGCTTTTGAGTAAAATGCACAGTTAATTTAAGGGTTTTGAACCGCGTGATGTTAATGTAGGCAGCTCTCGGCAACCGGAGAGTGAAATTTTGAACAGTGCTAGTCTAGTTCCAAAGAAGTTGATATAGGCAAAGGATCGGGAAATGACCCAGATTCTGTCATTCTAGTCGAACGTCGAGAATTCTGATGGAAAACA ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||