These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7752#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1513 fasta sequence [TCCCTGTGTTTCCTTCACATCCACTCTCCCATCCAGATTCCCAAGCCCATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCACTCCAGTCGAGGCACGGCCGGCTCCCCCCGCGTCGCCGGCGAGCAGGGCACGGGCGTGTCGCGCTCGCGGACGGCCTCCCCTCCCCTCCCCTCGTCCTAGCCTTCTCCTCCGTGCGGCGCACGGCCGGCGAGGCCACCCAGGGTTGGTGACCCAAGGGGGGCGAGAGCGCGGAGACGCGGCCCCCCCATCCATCTCCGTCTCCCCCGTCCGGATCGAATCCGAGGTCTATAAATGGCAGGAAGACACCGCATACCTCGTGAATACTATGATGAACGTCGAGGATTTCGTGATGGCCCCCCCACCTCCGCTTGCTCGAGCAAGGCCCATCTCTCCACGTCGCTTGGAGGAGGAGCTGTCTAGCCGCCGTGCTGAGATGCGCAGAATCCATGATGACAATCAGCGCCTAGCTGATGAAATTGTTGGTCTCAGGCAGGCAATGCCTCGTCTGAAGGAAGATCTCCATGCCGCAAGTCAAGCTATACCCAAGCTTCGTGCAGAAAAAGAACTTGAGTCAAGGGAGCTGACTCAGAGGAATCTGAAGTTGGAAGCTGAACTACGTTCCTTAGAACCCCTCAGGCAAGATGCCTTACAGCTACGGT-CCGAGGCCGGGAAACTACAGTCAATAAGGCAAGAGCTGACTGCAAAGGTGCAGGGGTTGTTAAAAGAGCTTGAGCATCAGAATTCTGAGAACCAG-AAATACCTGTCATGATAGCTGAACGTGATGCTCTTCGGCAGGAACTAGTCCGAATGAGGGGAACCCTTGAGTACGAGAAGAAGGCAAGGCCTGATCTGACAGCACAGGTGCAGGCAATGGAGAAGGATCTTGTTTCTATGGCTCAGGAATCTGAGAAGCTGAGGGCTGAGATTAAGAAGAGAAATGCACCCAGTTTCAGCGGCCATGGAGCTTATGGACCACCAATGGCGACTCCAGGGATGGGCCTGCAAGGCGTCTATGATGATGGCTATCCTTCCATAGGCAGCCGCTATGGCACTGGATCTTGGGCACCACATGATCCCCATGGTTATCCACAACTGTGACTGGGCTTCTGATCTTTCTTCCCTGGGCAGTGCTTTATCTTCGTAATATCGCTTGATGGTTGATACTGATCGTGACAAAGCTTTTCTCTTAGTAGAACTTGTGGTGCACAGTAGATGGTCTTTTG-GGGGTGCACTTCAAGTGTTGTTAGTTTAGCATATGTAGCAATATACCCGCTATGGTTGCCTTGGTACCTCTCCAAAAAATGTAATCAATGATGACTGTAAGAGGGAATTCAGTGCAACGAAGAAGAAAAATAGGAACTTAAGCTTTACAAGATGCAAGTTTGCGTATGAATATAACAAGGTGGAATCAGTCAGGGCCTGGATGTTGCGCAGAAGTTTGTCCCTACCAAATTGCAATAGCAAAAATTACTTATTCATGAGCGATA] [+] EMBL AK070561 [TCCCTGTGTTTCCTTCACATCCACTCTCCCATCCAGATTCCCAAGCCCATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCACTCCAGTCGAGGCACGGCCGGCTCCCCCCGCGTCGCCGGCGAGCAGGGCACGGGCGTGTCGCGCTCGCGGACGGCCTCCCCTCCCCTCCCCTCGTCCTAGCCTTCTCCTCCGTGCGGCGCACGGCCGGCGAGGCCACCCAGGGTTGGTGACCCAAGGGGGGCGAGAGCGCGGAGACGCGGCCCCCCCATCCATCTCCGTCTCCCCCGTCCGGATCGAATCCGAGGTCTATAAATGGCAGGAAGACACCGCATACCTCGTGAATACTATGATGAACGTCGAGGATTTCGTGATGGCCCCCCCACCTCCGCTTGCTCGAGCAAGGCCCATCTCTCCACGTCGCTTGGAGGAGGAGCTGTCTAGCCGCCGTGCTGAGATGCGCAGAATCCATGATGACAATCAGCGCCTAGCTGATGAAATTGTTGGTCTCAGGCAGGCAATGCCTCGTCTGAAGGAAGATCTCCATGCCGCAAGTCAAGCTATACCCAAGCTTCGTGCAGAAAAAGAACTTGAGTCAAGGGAGCTGACTCAGAGGAATCTGAAGTTGGAAGCTGAACTACGTTCCTTAGAACCCCTCAGGCAAGATGCCTTACAGCTACGGT CCGAGGCCGGGAAACTACAGTCAATAAGGCAAGAGCTGACTGCAAAGGTGCAGGGGTTGTTAAAAGAGCTTGAGCATCAGAATTCTGAGAACCAG AAATACCTGTCATGATAGCTGAACGTGATGCTCTTCGGCAGGAACTAGTCCGAATGAGGGGAACCCTTGAGTACGAGAAGAAGGCAAGGCCTGATCTGACAGCACAGGTGCAGGCAATGGAGAAGGATCTTGTTTCTATGGCTCAGGAATCTGAGAAGCTGAGGGCTGAGATTAAGAAGAGAAATGCACCCAGTTTCAGCGGCCATGGAGCTTATGGACCACCAATGGCGACTCCAGGGATGGGCCTGCAAGGCGTCTATGATGATGGCTATCCTTCCATAGGCAGCCGCTATGGCACTGGATCTTGGGCACCACATGATCCCCATGGTTATCCACAACTGTGACTGGGCTTCTGATCGTTCTTCCCTGGGCAGTGCTTTATCTTCGTAATATCGCTTGATGGTTGATACTGATCGTGACAAAGCTTTTCTCTTAGTAGAACTTGTGGTGCACAGTAGATGGTCTTTTG GGGGTGCACTTCAAGTGTTGTTAGTTTAGCATATGTAGCAATATACCAGCTATGGTTGCCTTGGTACCTCTCCAAAAAATGTAATCAATGATGACTGTAAGAGGGAATTCAGTGCAACGAAGAAGGAAAATAGGAACTTAAGCTTTACAAGATGCAAGTTTGCGTATGAATATAACAAGGT ] [+] EMBL BI118784 [ ATCTCTCCACGTCGCTTGGAGGAGGAGCTGTCTAGCCGCCGTGCTGAGATGCGCAGAATCCATGATGACAATCAGCGCCTAGCTGATGAAATTGTTGGTCTCAGGCAGGCAATGCCTCGTCTGAAGGAAGATCTCCATGCCGCAAGTCAAGCTATACCCAAGCTTCGTGCAGAAAAAGAACTTGAGTCAAGGGAGCTGACTCAGAGGAATCTGAAGTTGGAAGCTGAACTACGTTCCTTAGAACCCCTCAGGCAAGATGCCTTACAGCTACGGTCCCGAGGCCGGGAAACTACAGTCAATAAGGCAAGAGATGACTGCAAAGGTGCAGGGGTTGTTAAAAGAGCTTGAGCATCAGAATTCTGAGAACCAGAAAATACCTGTGATGATAGCTGAACGTGATGCTCTTCGGCAGGAACTAGTCCGAATGAGGGGAAC ] [+] EMBL CA762542 [ CGCTTGGAGGAGGAGCTGTCTAGCCGCCGTGCTGAGATGCGCAGAATCCATGATGACGATCAGCGCCTAGCTGATGAAATTGTTGGTCTCAGGCAGGCAATGCCTCGTCTGAAGGAAGATCTCCATGCCGCAAGTCAAGCTATACCCAAGCTTCGTGCAGAAAAAGAACTTGAGTCAAGGGAGCTGACTCTGAGGAATCTGAAGTTGGAAGCTGAACTACGTTCCTTAGAACCCCT ] [+] EMBL BI801792 [ CCTTGAGTACGAGAAGAAGCCAAGCCCTGATCTGACAGCACAGGTCCA GCAATGGAGAAGGATCTTGTTTCTATGGCTCAGGAATCTGAGAA CTGAGGGCTGAGATTAAGAAGAGAAATGCACCCAGTTTCACCGGCCATGGAGCTTATGGACCACCAATGGCGACTCCAGGGATGGGCCTGCAAGGCGTCTATGATGATGGCTATCCTTCCATAGCCA CCGCTATGGCACTGGATCTTGGGCACCACATGATCCCCATGGTTATCCACAACTGTGACTGGGCTTCTGATCTTTCTTCCCTGGGCAGTGCTTTATCTTCGTAATATCGCTTGATGGTTGATACTGATCGTGAC AAGCTTTTCTCTTAGTAGAACTTGTGGTGCACAGTAGATGGTCTTTTGCGGGGTGCACTTCAAGTGTTGTTAGTTTAGCATATGTAGC ATATACCCGCTATGGTTGCCTTGGTACCTCTCCAAAAAATGTAATC ATGATGACTGTAAGAGGGAATTCAGTGCAACGAAGAAGAAAAATAGGAACTTAAGCTTTACCAGATGCAAGTTTGCGTATGAATATAAAAAa ] [+] EMBL CA764606 [ aggggGAAGAGAAATGCACCCAGTTT AGCGGCCATGGAGCTTATGGACCACCAATGGCGACTCCAGGGATGGGCCTGCAAGGCGTCTATGATGATGGCTNTCCTTCCATAGGCAGCCGCTATGGCACTGGATCTTGGGCACCACATGATCCCCATGGTTATCCACAACTGTGACTGGGCTTCTGATCTTTCTTCCCTGGGCAGTGCTTTATCTTCGTAATATCGCTTGATGGTTGATACTGATCGTGACAAAGCTTTTCTCTTAGTAGAACTTGTGGTGCACAGTAGATGGTCTTTTG GGGGTGCACTTCAAGTGTTGTTAGTTTAGCATATGTAGCAATATACCCGCTATGGTTGCCTTGGTACCTCTCCAAAAAATGTAATCAATGATGACTGTAAGAGGGAATTCAGTGCAACGAAGAAGAAAAATAGGAACTTAAGCTTTACAAGATGCAAGTTTGCGTATGAATATAACAAGGTGGAATCAGTCAGGGCCTGGATGTTGCGCAGAAGTTTGTCCCTACCAAATTGCAATAGCAAAAATTACTTATTCATGAGCGATA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||