These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7790#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 3852 fasta sequence [TCGCCATCGAGAAGCAAGTCGCCACACGCGCCGCAGCAGCTGCCTCGAAGACGCCGCCGCCGCCACTGGCTACCTCCTCCGTCCTCCCTATTGATTTTCTTATCGCTCGAAGCCGGTCGTCGTCTCCTACAGTTCCGGCAAGATGCCTCCGCGCCGCCGACCCTCCCCTGTCTCCGCAGCATAGCGCCGCCGGATCCGGCCGCCGCCTCCTAACCACTCGACTTCTCGTTGCCCCCGCTGCCTACTCCGCCCACCGCCTGCTTCCAGCCCGCGGCTCCGGCGGCGCCTCCACGCACCGCCGGTCAGCCGCCTCGCTGGCCTCCCGCTAAACCCGGGGATCCACCCTCTCCCCAAAATCCCCCTTCCCTAACCCCAACCCCACCTGAAACCTAATCCGGCGCTCTTGCCGTTGTTGCACGGCCGCCAGAGTCAAGAATCTCGCCGGAGCACGAATCTCTGCCGGATCCAAAGGATAAAAAGGGAGGGAGGAAATGTGACACTCAGTGTATTGTACTCCAAACTGTAGTGGAAGCATCCTTTTTGGTTTCACGAACCATTTAATGTCAAAAGATTAAGGGATAGAAGGCAAATGGCAGAAACTGCAATATACCTAGCTCTCAGAAAAATAGGAATTGCCCTAGGACGAGAGAGAAGTGCTACTGCTTTGGAACATGACCTTGAAGGAAGATCAGCTTTGGAACATGGCCTTGAAGGAGGATCCTTTCTAATTAGATCTCTTACC----AG--------AGTAATATCTGAGATTATTAATAGTAATGATATATTAGTTCTTAGGCAAGCAGAACTTCAAGGTAGATTGAGGCGAATAGAAAGTGAACTTCGCATGATCCTTTGCTTCCTGGCTCAAATAGAAACAAGATATGATAACAAGCAAGTACTTCAAAGTTGGATTGGGGAAGCACGGAAACTAGGATGCCTTGTTGAACAAATAATGGACGAATATATTGTCTATATTGTACAGAGCAAACAATATCGACTTACCAAGAGAGTACAGGTTATACTGGCCTCACATCGCTTCACTGCTCAGCTGAAAGAAATTGAGGTGGAGCTGGAGCATCTTTCCAAAATGAAAAAACGATGGGTTCAAGTGGACAAGGAAACCTCATTAGCTTCTTCATCATCAATGTTTGGTCCTCATGTCAACAACATAGATACTAAGCGATATGCCGAAAGAAAGGAAGAACTGATTGAATCGCTAAAGAGTAAAGATATGACGAAAGATGGAGCTCTTTCTGTGATTGCAGTGTATGGTCAGCCTGGGTCAGGGAAAACCCATCTTGTTAAGGATGTTTATGCTAGTGAGAAGAAGTATTTCAGTACTTCTGCGTGGATTTCCATTGCTCAATGTCCCAATGCTGACACTGATGCTTTGAAAAGAATGATGATGGAAGAACTAGGAAGGCAAGTTGGCACTTCCACTGAGAGTACCTCACTGAGAGTAATGACGGAAAATCAGGATAGCAAGTTCCTGTTTGTATTTGACGATGTATGGGTGCCAGACATGGTTCACAAGGTACACCGTGCAGCTTCTGATAATAAAATGGGCAGCCGGATAATCATAATCGCTCGGATGCCAGAGGTTGCTTTTGTAAGAAGTGAATCTTCAGTGGAGTCACAGTCCCAAACACCATCTAGTTCGCTGGAACCTGTAAGACCCTCGGCGAGAGTCCCCAAGGAATTCATGAAGCTTACTTGTTTACATCCTAATGACAGTTTTGATATCTTCTGTACAAAGGCTTTTGGAAGACCAAGTGACTGCCCTATAGAACTCCGTGAAGTAACTTTGAAGATTATTGGCTTGTGCAATTTTCTTCCCCAAGCAATTGTTTCTATTGGAGCATTGCTCAGCTCAAAGCAAAAAACAGAGTCAGTCTGGAGTGAAATGGCTCAACAAATTGAAGATATTCAAAAAAGCAAGTCAAGCCTGAACAATGTGCAAAAAGTACTATATCTCAGTTACAAGAACCTTCCAATGCATCTCAAGAACTGCCTTTTGTATTGTAGTACTTTTCCGGCTGGTTTTCTCCTGTTGCCTGAGAGTCTTGTCCGGTTATGGGCTGCAGAGGGTTTCATCGAGAACCAGGGATCATTGCAAGTGGAGGAAATTGGTGAGCGCTATATAAAGGAGCTAATCCACTGGGGATTTCTGCAGGTTGTAGATGTGGACGAACAAGGTAGAGTAGCAAGTTGCAGGATGCCTATTGTGGTGCATGAGCTGGCTGTATCTATCTCTCAAAAGGAAGAATTTGGAGCTATCTGCCATGGTGGTAAACTAGCAGAGATGGATACCAATGTCCGCTGCCTATTTATCTCGGAAAACCCTGAAGATATTGGTGCATTAGTAGATTTTCCGTACCTTCGGACTCTTATGGCCAGCAGAAATGCTGCTGCAAATTTGAAGTCCTTACCGGCATCACTGACAGCCAAACTTAAGTATCTTACTGTTCTGAAACTGCAAGAATCTCCACTTGAAGAATTGCCCAGAGGTATTGGCTACCAGCTGTTTAATTTGCGATATCTTGGCTTGCGAAAATCACAAATACGATGCCTTCCATCTTCCATGGCCAATCTCTACAACCTGCAAACTTTGGACCTCAGGGGGAGCAGAATAAATGAACTGCCAAGTTGGATAGGCAAACTCATAAGATTGAGGCATCTTTCTGCTGACACATTGGATGGCCAAGGCCCAGACATATACCGAGCTGTGAAAGCCCCGAAAACTGTGAACTACCTGAAAGAATTGCGGACTCTCGAGACAGTGCAGGCAAGTGATACCTTTGAGAAGCATGTGGAGAAGCTGACCCAGTTAACTACTCTATCTGTTGTTATTGGAGAAGGCCGATCCAGCAAAACATTGTTTTCTTCATTGTCGAAGCTTTCCTGTCTTTCTAGTTTGCATGTCAGTGCAAGTCGTGTGGACGAGGAGTCTCTTGACTTTGAAACCCTGAATCCTACTAGTCTTGAAAAACTTGTTATCAGGGGCGGGTTGGCTGAGCAGACATTCCAATATCCTATTTTCAAATCTAAACAGATTAAAGTTCTGGAGTTAAGCTTGTGCAAGCTAAGGGATGATTCGCTCGTCCTACTATCTACAAATTTGTGTAACCTTGAATCGCTCCGCCTCCATAATATCAGTGGCATCTCCAAGCTGGTATTTCAAGCAATTAACAGTTTTGCCAACTTGAGGACACTTTTACTACATGAAATTGATGGAGTGGATGAACTTGAGATTCCAAATGGTTCGTTGGGAAGTCTTCAAGTTCTCCATGTGGTAAAAATAAGTCAGCTGAACAGTATCCATGACCAGGAGAGAATCATATCCGTCAGGGACCTATACTTTCCACAGTTATGGCTATCCAGAGAGAAACGAAATGCCAGCTAGTAGCAGCCAGCTGGACGCCCCATGAGGCCATGATATCACAGTTCACAGGCATAAGCATTACACAAGCTTGTCACATCATCAAGAAGGCAGGAGCTAGCACGGATTCTATTGCTACGAGCCTATATAAACTTTTACTGGTTTGTTATTTGCAGACATTCGGTCGATCGTCGACTGTTTACTGGTTTGTTATTTGCAGACATTCGGTCGATCGTCAAGTTGTCGCGTATGTTATTTCTTGCTTGTACTTTCACTTACCATGGGATATCATTTGTATCAAATAATCGTAATAACTTTGTGTTGTTTAATTGTTTCTCAATTTTCTTTCCTTTTTTTTTCTTTAGAAAAAAGCAAAGCCTTGCTTTGAAACTAGTTTACCGTCTTGTTTAGAAAGTTTAAGGTTACGAGAATTTGTTGGTCGGTAGCCAGACTATGAGAATCTAAAAGGCTGGATTTTT] [+] EMBL CB632171 [TCGCCATCGAGAAGCAAGTCGCCACACGCGCCGCAGCAGCTGCCTCGAAGACGCCGCCGCCGCCACTGGCTACCTCCTCCGTCCTCCCTATTGATTTTCTTATCGCTCGAAGCCGGTCGTCGTCTCCTACAGTTCCGGCAAGATGCCTCCGCGCCGCCGACCCTCCCCTGTCTCCGCAGCATAGCGCCGCCGGATCCGGCCGCCGCCTCCTAACCACTCGACTTCTCGTTGCCCCCGCTGCCTACTCCGCCCACCGCCTGCTTCCAGCCCGCGGCTCCGGCGGCGCCTCCACGCACCGCCGGTCAGCCGCCTCGCTGGCCTCCCGCTAAACCCGGGGATCCACCCTCTCCCCAAAATCCCCCTTCCCTAACCCCAACCCCACCTGAAACCTAATCCGGCGCTCTTGCCGTTGTTGCACGGCCGCCAGAGTCAAGAATCTCGCCGGAGCACGAATCTCTGCCGGATCCAAAGGATAAAAAGGGAGGGAGGAAATGTGACACTCAGTGTATTGTACTCCAAACTGTAGTGGAAGCATCCTTTTTGGTTTCACGAACCATTTAATGTCAAAAGATTAAGGGATAGAAGGCAAATGGCAGAAACTGCAATATACCTAGCTCTCAGAAAAATAGGAATTGCCCTAGGACGAGAGAGAAGTGCTACTGCTTTGGAACATGACCTTGAAGGAAGATCAGCTTTGGAACATGGCCTTGAAGGAGGATCCTTTCTAATTAGATCTTTTACCATTAAGTTCATTACAGTAATATCTGAGATTATTAATAGTGATGATATA ] [+] EMBL AK100303 [ gctcgCGAGTAGCAAGTCGCCACACGCGCCGCAGCAGCTGCCTCGAAGACGCCGCCGCCGCCACTGGCTACCTCCTCCGTCCTCCCTATTGATTTTCTTATCGCTCGAAGCCGGTCGTCGTCTCCTACAGTTCCGGCAAGATGCCTCCGCGCCGCCGACCCTCCCCTGTCTCCGCAGCATAGCGCCGCCGGATCCGGCCGCCGCCTCCTAACCACTCGACTTCTCGTTGCCCCCGCTGCCTACTCCGCCCACCGCCTGCTTCCAGCCCGCGGCTCCGGCGGCGCCTCCACGCACCGCCGGTCAGCCGCCTCGCTGGCCTCCCGCTAAACCCGGGGATCCACCCTCTCCCCAAAATCCCCCTTCCCTAACCCCAACCCCACCTGAAACCTAATCCGGCGCTCTTGCCGTTGTTGCACGGCCGCCAGAGTCAAGAATCTCGCCGGAGCACGAATCTCTGCCGGATCCAAAGGATAAAAAGGGAGGGAGGAAATGTGACACTCAGTGTATTGTACTCCAAACTGTAGTGGAAGCATCCTTTTTGGTTTCACGAACCATTTAATGTCAAAAGATTAAGGGATAGAAGGCAAATGGCAGAAACTGCAATATACCTAGCTCTCAGAAAAATAGGAATTGCCCTAGGACGAGAGAGAAGTGCTACTGCTTTGGAACATGACCTTGAAGGAAGATCAGCTTTGGAACATGGCCTTGAAGGAGGATCCTTTCTAATTAGATCTCTTACC AG AGTAATATCTGAGATTATTAATAGTAATGATATATTAGTTCTTAGGCAAGCAGAACTTCAAGGTAGATTGAGGCGAATAGAAAGTGAACTTCGCATGATCCTTTGCTTCCTGGCTCAAATAGAAACAAGATATGATAACAAGCAAGTACTTCAAAGTTGGATTGGGGAAGCACGGAAACTAGGATGCCTTGTTGAACAAATAATGGACGAATATATTGTCTATATTGTACAGAGCAAACAATATCGACTTACCAAGAGAGTACAGGTTATACTGGCCTCACATCGCTTCACTGCTCAGCTGAAAGAAATTGAGGTGGAGCTGGAGCATCTTTCCAAAATGAAAAAACGATGGGTTCAAGTGGACAAGGAAACCTCATTAGCTTCTTCATCATCAATGTTTGGTCCTCATGTCAACAACATAGATACTAAGCGATATGCCGAAAGAAAGGAAGAACTGATTGAATCGCTAAAGAGTAAAGATATGACGAAAGATGGAGCTCTTTCTGTGATTGCAGTGTATGGTCAGCCTGGGTCAGGGAAAACCCATCTTGTTAAGGATGTTTATGCTAGTGAGAAGAAGTATTTCAGTACTTCTGCGTGGATTTCCATTGCTCAATGTCCCAATGCTGACACTGATGCTTTGAAAAGAATGATGATGGAAGAACTAGGAAGGCAAGTTGGCACTTCCACTGAGAGTACCTCACTGAGAGTAATGACGGAAAATCAGGATAGCAAGTTCCTGTTTGTATTTGACGATGTATGGGTGCCAGACATGGTTCACAAGGTACACCGTGCAGCTTCTGATAATAAAATGGGCAGCCGGATAATCATAATCGCTCGGATGCCAGAGGTTGCTTTTGTAAGAAGTGAATCTTCAGTGGAGTCACAGTCCCAAACACCATCTAGTTCGCTGGAACCTGTAAGACCCTCGGCGAGAGTCCCCAAGGAATTCATGAAGCTTACTTGTTTACATCCTAATGACAGTTTTGATATCTTCTGTACAAAGGCTTTTGGAAGACCAAGTGACTGCCCTATAGAACTCCGTGAAGTAACTTTGAAGATTATTGGCTTGTGCAATTTTCTTCCCCAAGCAATTGTTTCTATTGGAGCATTGCTCAGCTCAAAGCAAAAAACAGAGTCAGTCTGGAGTGAAATGGCTCAACAAATTGAAGATATTCAAAAAAGCAAGTCAAGCCTGAACAATGTGCAAAAAGTACTATATCTCAGTTACAAGAACCTTCCAATGCATCTCAAGAACTGCCTTTTGTATTGTAGTACTTTTCCGGCTGGTTTTCTCCTGTTGCCTGAGAGTCTTGTCCGGTTATGGGCTGCAGAGGGTTTCATCGAGAACCAGGGATCATTGCAAGTGGAGGAAATTGGTGAGCGCTATATAAAGGAGCTAATCCACTGGGGATTTCTGCAGGTTGTAGATGTGGACGAACAAGGTAGAGTAGCAAGTTGCAGGATGCCTATTGTGGTGCATGAGCTGGCTGTATCTATCTCTCAAAAGGAAGAATTTGGAGCTATCTGCCATGGTGGTAAACTAGCAGAGATGGATACCAATGTCCGCTGCCTATTTATCTCGGAAAACCCTGAAGATATTGGTGCATTAGTAGATTTTCCGTACCTTCGGACTCTTATGGCCAGCAGAAATGCTGCTGCAAATTTGAAGTCCTTACCGGCATCACTGACAGCCAAACTTAAGTATCTTACTGTTCTGAAACTGCAAGAATCTCCACTTGAAGAATTGCCCAGAGGTATTGGCTACCAGCTGTTTAATTTGCGATATCTTGGCTTGCGAAAATCACAAATACGATGCCTTCCATCTTCCATGGCCAATCTCTACAACCTGCAAACTTTGGACCTCAGGGGGAGCAGAATAAATGAACTGCCAAGTTGGATAGGCAAACTCATAAGATTGAGGCATCTTTCTGCTGACACATTGGATGGCCAAGGCCCAGACATATACCGAGCTGTGAAAGCCCCGAAAACTGTGAACTACCTGAAAGAATTGCGGACTCTCGAGACAGTGCAGGCAAGTGATACCTTTGAGAAGCATGTGGAGAAGCTGACCCAGTTAACTACTCTATCTGTTGTTATTGGAGAAGGCCGATCCAGCAAAACATTGTTTTCTTCATTGTCGAAGCTTTCCTGTCTTTCTAGTTTGCATGTCAGTGCAAGTCGTGTGGACGAGGAGTCTCTTGACTTTGAAACCCTGAATCCTACTAGTCTTGAAAAACTTGTTATCAGGGGCGGGTTGGCTGAGCAGACATTCCAATATCCTATTTTCAAATCTAAACAGATTAAAGTTCTGGAGTTAAGCTTGTGCAAGCTAAGGGATGATTCGCTCGTCCTACTATCTACAAATTTGTGTAACCTTGAATCGCTCCGCCTCCATAATATCAGTGGCATCTCCAAGCTGGTATTTCAAGCAATTAACAGTTTTGCCAACTTGAGGACACTTTTACTACATGAAATTGATGGAGTGGATGAACTTGAGATTCCAAATGGTTCGTTGGGAAGTCTTCAAGTTCTCCATGTGGTAAAAATAAGTCAGCTGAACAGTATCCATGACCAGGAGAGAATCATATCCGTCAGGGACCTATACTTTCCACAGTTATGGCTATCCAGAGAGAAACGAAATGCCAGCTAGTAGCAGCCAGCTGGACGCCCCATGAGGCCATGATATCACAGTTCACAGGCATAAGCATTACACAAGCTTGTCACATCATCAAGAAGGCAGGAGCTAGCACGGATTCTATTGCTACGAGCCTATATAAACTTTTACTGGTTTGTTATTTGCAGACATTCGGTCGATCGTCGACTGTTTACTGGTTTGTTATTTGCAGACATTCGGTCGATCGTCAAGTTGTCGCGTATGTTATTTCTTGCTTGTACTTTCACTTACCATGGGATATCATTTGTATCAAATAATCGTAATAACTTTGTGTTGTTTAATTGTTTCTCAATTTTCTTTCCTTTTTTTTTCTTTAGAAAAAAGCAAAGCCTTGCTTTGAAACTAGTTTACCGTCTTGTTTAGAAAGTTTAAGGTTACGAGAATTTGTTGGTCGGTAGCCAGACTATGAGAATCTAAAAGGCTGGATTTTT] [+] EMBL AK066498 [ AAGCCGGTCGTCGTCTCCTACAGTTCCGGCAAGATGCCTCCGCGCCGCCGACCCTCCCCTGTCTCCGCAGCATAGCGCCGCCGGATCCGGCCGCCGCCTCCTAACCACTCGACTTCTCGTTGCCCCCGCTGCCTACTCCGCCCACCGCCTGCTTCCAGCCCGCGGCTCCGGCGGCGCCTCCACGCACCGCCGGTCAGCCGCCTCGCTGGCCTCCCGCTAAACCCGGGGATCCACCCTCTCCCCAAAATCCCCCTTCCCTAACCCCAACCCCACCTGAAACCTAATCCGGCGCTCTTGCCGTTGTTGCACGGCCGCCAGAGTCAAGAATCTCGCCGGAGCACGAATCTCTGCCGGATCCAAAGGATAAAAAGGGAGGGAGGAAATGTGACACTCAGTGTATTGTACTCCAAACTGTAGTGGAAGCATCCTTTTTGGTTTCACGAACCATTTAATGTCAAAAGATTAAGGGATAGAAGGCAAATGGCAGAAACTGCAATATACCTAGCTCTCAGAAAAATAGGAATTGCCCTAGGACGAGAGAGAAGTGCTACTGCTTTGGAACATGACCTTGAAGGAAGATCAGCTTTGGAACATGGCCTTGAAGGAGGATCCTTTCTAATTAGATCTCTTACC AG AGTAATATCTGAGATTATTAATAGTAATGATATATTAGTTCTTAGGCAAGCAGAACTTCAAGGTAGATTGAGGCGAATAGAAAGTGAACTTCGCATGATCCTTTGCTTCCTGGCTCAAATAGAAACAAGATATGATAACAAGCAAGTACTTCAAAGTTGGATTGGGGAAGCACGGAAACTAGGATGCCTTGTTGAACAAATAATGGACGAATATATTGTCTATATTGTACAGAGCAAACAATATCGACTTACCAAGAGAGTACAGGTTATACTGGCCTCACATCGCTTCACTGCTCAGCTGAAAGAAATTGAGGTGGAGCTGGAGCATCTTTCCAAAATGAAAAAACGATGGGTTCAAGTGGACAAGGAAACCTCATTAGCTTCTTCATCATCAATGTTTGGTCCTCATGTCAACAACATAGATACTAAGCGATATGCCGAAAGAAAGGAAGAACTGATTGAATCGCTAAAGAGTAAAGATATGACGAAAGATGGAGCTCTTTCTGTGATTGCAGTGTATGGTCAGCCTGGGTCAGGGAAAACCCATCTTGTTAAGGATGTTTATGCTAGTGAGAAGAAGTATTTCAGTACTTCTGCGTGGATTTCCATTGCTCAATGTCCCAATGCTGACACTGATGCTTTGAAAAGAATGATGATGGAAGAACTAGGAAGGCAAGTTGGCACTTCCACTGAGAGTACCTCACTGAGAGTAATGACGGAAAATCAGGATAGCAAGTTCCTGTTTGTATTTGACGATGTATGGGTGCCAGACATGGTTCACAAGGTACACCGTGCAGCTTCTGATAATAAAATGGGCAGCCGGATAATCATAATCGCTCGGATGCCAGAGGTTGCTTTTGTAAGAAGTGAATCTTCAGTGGAGTCACAGTCCCAAACACCATCTAGTTCGCTGGAACCTGTAAGACCCTCGGCGAGAGTCCCCAAGGAATTCATGAAGCTTACTTGTTTACATCCTAATGACAGTTTTGATATCTTCTGTACAAAGGCTTTTGGAAGACCAAGTGACTGCCCTATAGAACTCCGTGAAGTAACTTTGAAGATTATTGGCTTGTGCAATTTTCTTCCCCAAGCAATTGTTTCTATTGGAGCATTGCTCAGCTCAAAGCAAAAAACAGAGTCAGTCTGGAGTGAAATGGCTCAACAAATTGAAGATATTCAAAAAAGCAAGTCAAGCCTGAACAATGTGCAAAAAGTACTATATCTCAGTTACAAGAACCTTCCAATGCATCTCAAGAACTGCCTTTTGTATTGTAGTACTTTTCCGGCTGGTTTTCTCCTGTTGCCTGAGAGTCTTGTCCGGTTATGGGCTGCAGAGGGTTTCATCGAGAACCAGGGATCATTGCAAGTGGAGGAAATTGGTGAGCGCTATATAAAGGAGCTAATCCACTGGGGATTTCTGCAGGTTGTAGATGTGGACGAACAAGGTAGAGTAGCAAGTTGCAGGATGCCTATTGTGGTGCATGAGCTGGCTGTATCTATCTCTCAAAAGGAAGAATTTGGAGCTATCTGCCATGGTGGTAAACTAGCAGAGATGGATACCAATGTCCGCTGCCTATTTATCTCGGAAAACCCTGAAGATATTGGTGCATTAGTAGATTTTCCGTACCTTCGGACTCTTATGGCCAGCAGAAATGCTGCTGCAAATTTGAAGTCCTTACCGGCATCACTGACAGCCAAACTTAAGTATCTTACTGTTCTGAAACTGCAAGAATCTCCACTTGAAGAATTGCCCAGAGGTATTGGCTACCAGCTGTTTAATTTGCGATATCTTGGCTTGCGAAAATCACAAATACGATGCCTTCCATCTTCCATGGCCAATCTCTACAACCTGCAAACTTTGGACCTCAGGGGGAGCAGAATAAATGAACTGCCAAGTTGGATAGGCAAACTCATAAGATTGAGGCATCTTTCTGCTGACACATTGGATGGCCAAGGCCCAGACATATACCGAGCTGTGAAAGCCCCGAAAACTGTGAACTACCTGAAAGAATTGCGGACTCTCGAGACAGTGCAGGCAAGTGATACCTTTGAGAAGCATGTGGAGAAGCTGACCCAGTTAACTACTCTATCTGTTGTTATTGGAGAAGGCCGATCCAGCAAAACATTGTTTTCTTCATTGTCGAAGCTTTCCTGTCTTTCTAGTTTGCATGTCAGTGCAAGTCGTGTGGACGAGGAGTCTCTTGACTTTGAAACCCTGAATCCTACTAGTCTTGAAAAACTTGTTATCAGGGGCGGGTTGGCTGAGCAGACATTCCAATATCCTATTTTCAAATCTAAACAGATTAAAGTTCTGGAGTTAAGCTTGTGCAAGCTAAGGGATGATTCGCTCGTCCTACTATCTACAAATTTGTGTAACCTTGAATCGCTCCGCCTCCATAATATCAGTGGCATCTCCAAGCTGGTATTTCAAGCAATTAACAGTTTTGCCAACTTGAGGACACTTTTACTACATGAAATTGATGGAGTGGATGAACTTGAGATTCCAAATGGTTCGTTGGGAAGTCTTCAAGTTCTCCATGTGGTAAAAATAAGTCAGCTGAACAGTATCCATGACCAGGAGAGAATCATATCCGTCAGGGACCTATACTTTCCACAGTTATGGCTATCCAGAGAGAAACGAAATGCCAGCTAGTAGCAGCCAGCTGGACGCCCCATGAGGCCATGATATCACAGTTCACAGGCATAAGCATTACACAAGCTTGTCACATCATCAAGAAGGCAGGAGCTAGCACGGATTCTATTGCTACGAGCCTATATAAACTTTTACTGGTTTGTTATTTGCAGACATTCGGTCGATCGTCGACTGTTTACTGGTTTGTTATTTGCAGACATTCGGTCGATCGTCAAGTTGTCGCGTATGTTATTTCTTGCTTGTACTTTCACTTACCATGGGATATCATTTGTATCAAATAATCGTAATAACTT ] [+] EMBL CA998443 [ AGATATTGGTGCATTAGTAGATTTTCCGTACCTTCGGACTCTTATGGCCAGCAGAAATGCTGCTGCAAATTTGAAGTCCTTACCGGCATCACTGACAGCCAAACTTAAGTATCTTACTGTTCTGAAACTGCAAGAATCTCCACTTGAAGAATTGCCCAGAGGTATTGGCTACCAGCTGTTTAATTTGCGATATCTTGGCTTGCGAAAATCACAAATACGATGCCTTCCATCTTCCATGGCCCATCTCTACAAC ] consensusID : consensus_7790#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 701 fasta sequence [CAATATCCTATTTTCAAATTTAAACAGATTAAAGTTCTGGAGTTAAGCTTGTGCAAGCTAAGGGATGATTCGCTCGCCCTACTATTTACAAATTTGTGTACCCTTGAATCGCTCCCCCTCCATAATATCAGTGGCATCTCCAAGCTGGTATTTCAAGCAATTAACAGTTTTGCCAACTTGAGGACCCTTTTACTACATGAAATTGATGGAGGGGATGAACTTGAGATTCCAAATGGTTCGTTGGGAAGTTTTCAAGTTTTCCATGTGGTAAAAATAAGTCAGCTGAACAGTATCCATGACCAGGAGAGAATCATATCCGTCAGGGACCTATACTTTCCCCAGTTATGGCTATCCAGAGAGAAACGAAATCCCAGCTAGTAGCAGCCAGCTGGACGCCCCATGAGGCCATGATATCCCAGTTCCCAGGCATAAGCATTACCCAAGCTTGTCCCATCATCAAGAAGGCTGGAGCTAGCCCGGATTTTATTGCTACGAGCCTATATAAACTTTTACTGGTTTGTTATTTGCAGACATTCGGTCGATCGTCGACTGTTTACTGGTTTGTTATTTGCAGACATTCGGTCGATCGTCAAGTTGTCGCGTATGTTATTTTTTGCTTGTACTTTCCCTTCCCATGGGATATCATTTGTATCAAATAATCGTAAAAGCTTTGTGTTGTTTAAAAAAAAAAAAAAAAAAAA] [-] EMBL CB632172 [CAATATCCTATTTTCAAATTTAAACAGATTAAAGTTCTGGAGTTAAGCTTGTGCAAGCTAAGGGATGATTCGCTCGCCCTACTATTTACAAATTTGTGTACCCTTGAATCGCTCCCCCTCCATAATATCAGTGGCATCTCCAAGCTGGTATTTCAAGCAATTAACAGTTTTGCCAACTTGAGGACCCTTTTACTACATGAAATTGATGGAGGGGATGAACTTGAGATTCCAAATGGTTCGTTGGGAAGTTTTCAAGTTTTCCATGTGGTAAAAATAAGTCAGCTGAACAGTATCCATGACCAGGAGAGAATCATATCCGTCAGGGACCTATACTTTCCCCAGTTATGGCTATCCAGAGAGAAACGAAATCCCAGCTAGTAGCAGCCAGCTGGACGCCCCATGAGGCCATGATATCCCAGTTCCCAGGCATAAGCATTACCCAAGCTTGTCCCATCATCAAGAAGGCTGGAGCTAGCCCGGATTTTATTGCTACGAGCCTATATAAACTTTTACTGGTTTGTTATTTGCAGACATTCGGTCGATCGTCGACTGTTTACTGGTTTGTTATTTGCAGACATTCGGTCGATCGTCAAGTTGTCGCGTATGTTATTTTTTGCTTGTACTTTCCCTTCCCATGGGATATCATTTGTATCAAATAATCGTAAAAGCTTTGTGTTGTTTAAAAAAAAAAAAAAAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_7790#0 TCGCCATCGAGAAGCAAGTCGCCACACGCGCCGCAGCAGCTGCCTCGAAGACGCCGCCGC 60 consensus_7790#1 ------------------------------------------------------------ consensus_7790#0 CGCCACTGGCTACCTCCTCCGTCCTCCCTATTGATTTTCTTATCGCTCGAAGCCGGTCGT 120 consensus_7790#1 ------------------------------------------------------------ consensus_7790#0 CGTCTCCTACAGTTCCGGCAAGATGCCTCCGCGCCGCCGACCCTCCCCTGTCTCCGCAGC 180 consensus_7790#1 ------------------------------------------------------------ consensus_7790#0 ATAGCGCCGCCGGATCCGGCCGCCGCCTCCTAACCACTCGACTTCTCGTTGCCCCCGCTG 240 consensus_7790#1 ------------------------------------------------------------ consensus_7790#0 CCTACTCCGCCCACCGCCTGCTTCCAGCCCGCGGCTCCGGCGGCGCCTCCACGCACCGCC 300 consensus_7790#1 ------------------------------------------------------------ consensus_7790#0 GGTCAGCCGCCTCGCTGGCCTCCCGCTAAACCCGGGGATCCACCCTCTCCCCAAAATCCC 360 consensus_7790#1 ------------------------------------------------------------ consensus_7790#0 CCTTCCCTAACCCCAACCCCACCTGAAACCTAATCCGGCGCTCTTGCCGTTGTTGCACGG 420 consensus_7790#1 ------------------------------------------------------------ consensus_7790#0 CCGCCAGAGTCAAGAATCTCGCCGGAGCACGAATCTCTGCCGGATCCAAAGGATAAAAAG 480 consensus_7790#1 ------------------------------------------------------------ consensus_7790#0 GGAGGGAGGAAATGTGACACTCAGTGTATTGTACTCCAAACTGTAGTGGAAGCATCCTTT 540 consensus_7790#1 ------------------------------------------------------------ consensus_7790#0 TTGGTTTCACGAACCATTTAATGTCAAAAGATTAAGGGATAGAAGGCAAATGGCAGAAAC 600 consensus_7790#1 ------------------------------------------------------------ consensus_7790#0 TGCAATATACCTAGCTCTCAGAAAAATAGGAATTGCCCTAGGACGAGAGAGAAGTGCTAC 660 consensus_7790#1 ------------------------------------------------------------ consensus_7790#0 TGCTTTGGAACATGACCTTGAAGGAAGATCAGCTTTGGAACATGGCCTTGAAGGAGGATC 720 consensus_7790#1 ------------------------------------------------------------ consensus_7790#0 CTTTCTAATTAGATCTCTTACCAGAGTAATATCTGAGATTATTAATAGTAATGATATATT 780 consensus_7790#1 ------------------------------------------------------------ consensus_7790#0 AGTTCTTAGGCAAGCAGAACTTCAAGGTAGATTGAGGCGAATAGAAAGTGAACTTCGCAT 840 consensus_7790#1 ------------------------------------------------------------ consensus_7790#0 GATCCTTTGCTTCCTGGCTCAAATAGAAACAAGATATGATAACAAGCAAGTACTTCAAAG 900 consensus_7790#1 ------------------------------------------------------------ consensus_7790#0 TTGGATTGGGGAAGCACGGAAACTAGGATGCCTTGTTGAACAAATAATGGACGAATATAT 960 consensus_7790#1 ------------------------------------------------------------ consensus_7790#0 TGTCTATATTGTACAGAGCAAACAATATCGACTTACCAAGAGAGTACAGGTTATACTGGC 1020 consensus_7790#1 ------------------------------------------------------------ consensus_7790#0 CTCACATCGCTTCACTGCTCAGCTGAAAGAAATTGAGGTGGAGCTGGAGCATCTTTCCAA 1080 consensus_7790#1 ------------------------------------------------------------ consensus_7790#0 AATGAAAAAACGATGGGTTCAAGTGGACAAGGAAACCTCATTAGCTTCTTCATCATCAAT 1140 consensus_7790#1 ------------------------------------------------------------ consensus_7790#0 GTTTGGTCCTCATGTCAACAACATAGATACTAAGCGATATGCCGAAAGAAAGGAAGAACT 1200 consensus_7790#1 ------------------------------------------------------------ consensus_7790#0 GATTGAATCGCTAAAGAGTAAAGATATGACGAAAGATGGAGCTCTTTCTGTGATTGCAGT 1260 consensus_7790#1 ------------------------------------------------------------ consensus_7790#0 GTATGGTCAGCCTGGGTCAGGGAAAACCCATCTTGTTAAGGATGTTTATGCTAGTGAGAA 1320 consensus_7790#1 ------------------------------------------------------------ consensus_7790#0 GAAGTATTTCAGTACTTCTGCGTGGATTTCCATTGCTCAATGTCCCAATGCTGACACTGA 1380 consensus_7790#1 ------------------------------------------------------------ consensus_7790#0 TGCTTTGAAAAGAATGATGATGGAAGAACTAGGAAGGCAAGTTGGCACTTCCACTGAGAG 1440 consensus_7790#1 ------------------------------------------------------------ consensus_7790#0 TACCTCACTGAGAGTAATGACGGAAAATCAGGATAGCAAGTTCCTGTTTGTATTTGACGA 1500 consensus_7790#1 ------------------------------------------------------------ consensus_7790#0 TGTATGGGTGCCAGACATGGTTCACAAGGTACACCGTGCAGCTTCTGATAATAAAATGGG 1560 consensus_7790#1 ------------------------------------------------------------ consensus_7790#0 CAGCCGGATAATCATAATCGCTCGGATGCCAGAGGTTGCTTTTGTAAGAAGTGAATCTTC 1620 consensus_7790#1 ------------------------------------------------------------ consensus_7790#0 AGTGGAGTCACAGTCCCAAACACCATCTAGTTCGCTGGAACCTGTAAGACCCTCGGCGAG 1680 consensus_7790#1 ------------------------------------------------------------ consensus_7790#0 AGTCCCCAAGGAATTCATGAAGCTTACTTGTTTACATCCTAATGACAGTTTTGATATCTT 1740 consensus_7790#1 ------------------------------------------------------------ consensus_7790#0 CTGTACAAAGGCTTTTGGAAGACCAAGTGACTGCCCTATAGAACTCCGTGAAGTAACTTT 1800 consensus_7790#1 ------------------------------------------------------------ consensus_7790#0 GAAGATTATTGGCTTGTGCAATTTTCTTCCCCAAGCAATTGTTTCTATTGGAGCATTGCT 1860 consensus_7790#1 ------------------------------------------------------------ consensus_7790#0 CAGCTCAAAGCAAAAAACAGAGTCAGTCTGGAGTGAAATGGCTCAACAAATTGAAGATAT 1920 consensus_7790#1 ------------------------------------------------------------ consensus_7790#0 TCAAAAAAGCAAGTCAAGCCTGAACAATGTGCAAAAAGTACTATATCTCAGTTACAAGAA 1980 consensus_7790#1 ------------------------------------------------------------ consensus_7790#0 CCTTCCAATGCATCTCAAGAACTGCCTTTTGTATTGTAGTACTTTTCCGGCTGGTTTTCT 2040 consensus_7790#1 ------------------------------------------------------------ consensus_7790#0 CCTGTTGCCTGAGAGTCTTGTCCGGTTATGGGCTGCAGAGGGTTTCATCGAGAACCAGGG 2100 consensus_7790#1 ------------------------------------------------------------ consensus_7790#0 ATCATTGCAAGTGGAGGAAATTGGTGAGCGCTATATAAAGGAGCTAATCCACTGGGGATT 2160 consensus_7790#1 ------------------------------------------------------------ consensus_7790#0 TCTGCAGGTTGTAGATGTGGACGAACAAGGTAGAGTAGCAAGTTGCAGGATGCCTATTGT 2220 consensus_7790#1 ------------------------------------------------------------ consensus_7790#0 GGTGCATGAGCTGGCTGTATCTATCTCTCAAAAGGAAGAATTTGGAGCTATCTGCCATGG 2280 consensus_7790#1 ------------------------------------------------------------ consensus_7790#0 TGGTAAACTAGCAGAGATGGATACCAATGTCCGCTGCCTATTTATCTCGGAAAACCCTGA 2340 consensus_7790#1 ------------------------------------------------------------ consensus_7790#0 AGATATTGGTGCATTAGTAGATTTTCCGTACCTTCGGACTCTTATGGCCAGCAGAAATGC 2400 consensus_7790#1 ------------------------------------------------------------ consensus_7790#0 TGCTGCAAATTTGAAGTCCTTACCGGCATCACTGACAGCCAAACTTAAGTATCTTACTGT 2460 consensus_7790#1 ------------------------------------------------------------ consensus_7790#0 TCTGAAACTGCAAGAATCTCCACTTGAAGAATTGCCCAGAGGTATTGGCTACCAGCTGTT 2520 consensus_7790#1 ------------------------------------------------------------ consensus_7790#0 TAATTTGCGATATCTTGGCTTGCGAAAATCACAAATACGATGCCTTCCATCTTCCATGGC 2580 consensus_7790#1 ------------------------------------------------------------ consensus_7790#0 CAATCTCTACAACCTGCAAACTTTGGACCTCAGGGGGAGCAGAATAAATGAACTGCCAAG 2640 consensus_7790#1 ------------------------------------------------------------ consensus_7790#0 TTGGATAGGCAAACTCATAAGATTGAGGCATCTTTCTGCTGACACATTGGATGGCCAAGG 2700 consensus_7790#1 ------------------------------------------------------------ consensus_7790#0 CCCAGACATATACCGAGCTGTGAAAGCCCCGAAAACTGTGAACTACCTGAAAGAATTGCG 2760 consensus_7790#1 ------------------------------------------------------------ consensus_7790#0 GACTCTCGAGACAGTGCAGGCAAGTGATACCTTTGAGAAGCATGTGGAGAAGCTGACCCA 2820 consensus_7790#1 ------------------------------------------------------------ consensus_7790#0 GTTAACTACTCTATCTGTTGTTATTGGAGAAGGCCGATCCAGCAAAACATTGTTTTCTTC 2880 consensus_7790#1 ------------------------------------------------------------ consensus_7790#0 ATTGTCGAAGCTTTCCTGTCTTTCTAGTTTGCATGTCAGTGCAAGTCGTGTGGACGAGGA 2940 consensus_7790#1 ------------------------------------------------------------ consensus_7790#0 GTCTCTTGACTTTGAAACCCTGAATCCTACTAGTCTTGAAAAACTTGTTATCAGGGGCGG 3000 consensus_7790#1 ------------------------------------------------------------ consensus_7790#0 GTTGGCTGAGCAGACATTCCAATATCCTATTTTCAAATCTAAACAGATTAAAGTTCTGGA 3060 consensus_7790#1 -------------------CAATATCCTATTTTCAAATTTAAACAGATTAAAGTTCTGGA 41 ******************* ********************* consensus_7790#0 GTTAAGCTTGTGCAAGCTAAGGGATGATTCGCTCGTCCTACTATCTACAAATTTGTGTAA 3120 consensus_7790#1 GTTAAGCTTGTGCAAGCTAAGGGATGATTCGCTCGCCCTACTATTTACAAATTTGTGTAC 101 *********************************** ******** ************** consensus_7790#0 CCTTGAATCGCTCCGCCTCCATAATATCAGTGGCATCTCCAAGCTGGTATTTCAAGCAAT 3180 consensus_7790#1 CCTTGAATCGCTCCCCCTCCATAATATCAGTGGCATCTCCAAGCTGGTATTTCAAGCAAT 161 ************** ********************************************* consensus_7790#0 TAACAGTTTTGCCAACTTGAGGACACTTTTACTACATGAAATTGATGGAGTGGATGAACT 3240 consensus_7790#1 TAACAGTTTTGCCAACTTGAGGACCCTTTTACTACATGAAATTGATGGAGGGGATGAACT 221 ************************ ************************* ********* consensus_7790#0 TGAGATTCCAAATGGTTCGTTGGGAAGTCTTCAAGTTCTCCATGTGGTAAAAATAAGTCA 3300 consensus_7790#1 TGAGATTCCAAATGGTTCGTTGGGAAGTTTTCAAGTTTTCCATGTGGTAAAAATAAGTCA 281 **************************** ******** ********************** consensus_7790#0 GCTGAACAGTATCCATGACCAGGAGAGAATCATATCCGTCAGGGACCTATACTTTCCACA 3360 consensus_7790#1 GCTGAACAGTATCCATGACCAGGAGAGAATCATATCCGTCAGGGACCTATACTTTCCCCA 341 ********************************************************* ** consensus_7790#0 GTTATGGCTATCCAGAGAGAAACGAAATGCCAGCTAGTAGCAGCCAGCTGGACGCCCCAT 3420 consensus_7790#1 GTTATGGCTATCCAGAGAGAAACGAAATCCCAGCTAGTAGCAGCCAGCTGGACGCCCCAT 401 **************************** ******************************* consensus_7790#0 GAGGCCATGATATCACAGTTCACAGGCATAAGCATTACACAAGCTTGTCACATCATCAAG 3480 consensus_7790#1 GAGGCCATGATATCCCAGTTCCCAGGCATAAGCATTACCCAAGCTTGTCCCATCATCAAG 461 ************** ****** **************** ********** ********** consensus_7790#0 AAGGCAGGAGCTAGCACGGATTCTATTGCTACGAGCCTATATAAACTTTTACTGGTTTGT 3540 consensus_7790#1 AAGGCTGGAGCTAGCCCGGATTTTATTGCTACGAGCCTATATAAACTTTTACTGGTTTGT 521 ***** ********* ****** ************************************* consensus_7790#0 TATTTGCAGACATTCGGTCGATCGTCGACTGTTTACTGGTTTGTTATTTGCAGACATTCG 3600 consensus_7790#1 TATTTGCAGACATTCGGTCGATCGTCGACTGTTTACTGGTTTGTTATTTGCAGACATTCG 581 ************************************************************ consensus_7790#0 GTCGATCGTCAAGTTGTCGCGTATGTTATTTCTTGCTTGTACTTTCACTTACCATGGGAT 3660 consensus_7790#1 GTCGATCGTCAAGTTGTCGCGTATGTTATTTTTTGCTTGTACTTTCCCTTCCCATGGGAT 641 ******************************* ************** *** ********* consensus_7790#0 ATCATTTGTATCAAATAATCGTAATAACTTTGTGTTGTTTAATTGTTTCTCAATTTTCTT 3720 consensus_7790#1 ATCATTTGTATCAAATAATCGTAAAAGCTTTGTGTTGTTTAAAAAAAAAAAAAAAAAAAA 701 ************************ * *************** ** consensus_7790#0 TCCTTTTTTTTTCTTTAGAAAAAAGCAAAGCCTTGCTTTGAAACTAGTTTACCGTCTTGT 3780 consensus_7790#1 ------------------------------------------------------------ consensus_7790#0 TTAGAAAGTTTAAGGTTACGAGAATTTGTTGGTCGGTAGCCAGACTATGAGAATCTAAAA 3840 consensus_7790#1 ------------------------------------------------------------ consensus_7790#0 GGCTGGATTTTT 3852 consensus_7790#1 ------------ |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||