These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7946#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 671 fasta sequence [ATCATTCCCTCATCCCATTAAATTTGCTCAAATAATTAAATATGACAGGCATGGGTTCTTCCATCGG-CCGTGCCACCATTTTCTACTGCGTTGCTCTATCCATAATTGCCGGCG-CCGCAGCGACACAGGTGCCCCCCA-CCGAAGCAGAGTCCGTAGAAG-CGGCAGAGCTTGCGTCCTCTGCCTTCAAGGCCGACA-CGTTGCCCTCAGCCTCCCGCAAGCTGATGG-CCGTTAGTGA-CGTG-CCGCTAG-CGCCGGTGTG-CCCGGTGCGGTTCGACAAGATGAAGGGGCCCGCCATCGAGC-TGGGAAAGAAGTG-CAAGACGACAGGGGTGAAGGTGTGCTGTG-AGGCGTTC-AAGACATTCGCATG-CCCGCACAACAAGCTGATCAATGACGTCAACAACGGATGCGCGGACGAAATGTTCTACACCATCCACACCTACGGCCAATTGCTGCCGGGAACCATCTTCAAGAAATGCCTCGAGGGACCGCATGGGATGAAGTGTTGAATTCGATCGTGCTGATTCGACTTGCTCGATCGATATCGCTCCGTTGTTGCTAGCCTCCGGCCTGATCTATACTACCTATAACGATGAATGTCCCTTTCGTCATCTTGCAATGTAACTAAACTTACTTTTATTACTTCGAAATGCAATGAACCACAAAAGGTTTATTAAAAA] [+] EMBL AK121460 [ATCATTCCCTCATCCCATTAAATTTGCTCAAATAATTAAATATGACAGGCATGGGTTCTTCCATCGG CCGTGCCACCATTTTCTACTGCGTTGCTCTATCCATAATTGCCGGCG CCGCAGCGACACAGGTGCCCCCCA CCGAAGCAGAGTCCGTAGAAG CGGCAGAGCTTGCGTCCTCTGCCTTCAAGGCCGACA CGTTGCCCTCAGCCTCCCGCAAGCTGATGG CCGTTAGTGA CGTG CCGCTAG CGCCGGTGTG CCCGGTGCGGTTCGACAAGATGAAGGGGCCCGCCATCGAGC TGGGAAAGAAGTG CAAGACGACAGGGGTGAAGGTGTGCTGTG AGGCGTTC AAGACATTCGCATG CCCGCACAACAAGCTGATCAATGACGTCAACAACGGATGCGCGGACGAAATGTTCTACACCATCCACACCTACGGCCAATTGCTGCCGGGAACCATCTTCAAGAAATGCCTCGAGGGACCGCATGGGATGAAGTGTTGAATTCGATCGTGCTGATTCGACTTGCTCGATCGATATCGCTCCGTTGTTGCTAGCCTCCGGCCTGATCTATACTACCTATAACGATGAATGTCCCTTTCGTCATCTTGCAATGTAACTAAACTTACTTTTATTACTTCGAAATGCAATGAACCACAA ] [+] EMBL BE229877 [ CTCATCCCATTAAATTTGCTCAAATAATTAAATATGACAGGCATGGGTTCTTCCATCGGCCCGTGCCACCATTTTCTACTGCGTTGCTCTATCCATAATTGCCGGCGCCCGCAGCGACACAGGTGCCCCCCACCCGAAGCAGAGTCCGTAGAAGCCGGCAGAGCTTGCGTCCTCTGCCTTCAAGGCCGACACCGTTGCCCTCAGCCTCCCGCAAGCTGATGGCCCGTTAGTGACCGTGCCCGCTAGCCGCCGGTGTGCCCCGGTGCGGTTCGACAAGATGAAGGGGCCCGCCATCGAGC TGGGAAAGAAGTG CAAGACG ] [+] EMBL AU163719 [ TAAATTTGCTCAAATAATTAAATATGACAGGCATGGGTTCTTCCATCGG CCGTGCCACCATTTTCTACTGCGTTGCTCTATCCATAATTGCCGGCG CCGCAGCGACACAGGTGCCCCCCA CCGAAGCAGAGTCCGTAGAAG CGGCAGAGCTTGCGTCCTCTGCCTTCAAGGCCGACA CGTTGCCCTCAGCCTCCCGCAAGCTGATGG CCGTTAGTGA CGTG CCG TAG CGCCGGTGTG CCC GTGCGGTTCGACAAGATGAAGGGG CCG CATCGAACTTGGGAAAG ANT CAAGACGNCAAGGGTGAA GTGT CTTTT AAGCG TC AAG CATTCGCATG CCGCACAACAANCTGATC ATGACGT ] [+] EMBL C73457 [ GCTCAAATAATTAAATATGACAGGCATGGGTTCTTCCATCGG CCGTGCCACCATTTTCTACTGCGTTGCTCTATCCATAATTGCCGGCG CCGCAGCGACACAGGTGCCCCCCA CCGAAGCAGAGTCCGTAGAAG CGGCAGAGCTTGCGTCCTCTGCCTTCAAGGCCGACA CGTTGCCCTCAGCCTCCCGCAAGCTGATGG CCGTTAGTGA CGTG CCGCTAG CGCCGGTGTG CCCGGTGCGGTTCGACAAGATGAAGGGGCCCGCCATCGAGC TGGGAAAGAAGTG CAAGACGACAGGGGTGAAGGTGTGCTGTG AGGCGTTC AAGACATTCGCATG CCCGCACAACAAGCTGATCAATGACGTCAACAACGGATGCGCGGACGAAATGTTCTACAACATNCACAACTAC ] [+] EMBL C99126 [ aAAAG ANTGCCAAGACGACAGGGGTGAAGGTGTGCTGTGAAGGCGTTCAAAGACATTCGCATGCCCCGCACAACAAGCTGATCAATGACGTCAACAACGGATGCGCGGACGAAATGTTCTACACCATCCACA CTACGGCCAATTGCTGCCGGGAACCATCTTCAAGAAATGCCTCGAGGGACCGCATGGGATGAAGTGTTGAATTCGATCGTGCTGATTCGACTTGCTCGATCGATATCGCTCCGTTGTTGCTAACCTCCGGCCTGATCTATACTACCTATAACGATGAATGTCCCTTTCGTCATCTTGCAATGTAACTAAACTTACTTTTATTACTTCGAAATGCAATGAACCACAAAAGGTTTATTAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||