These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8133#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 442 fasta sequence [ATTTGTCAGCTGTTAGTTGTCACACCTACTCATCAGCCAACCAATTCGCCATCAATAGCAAACCAAGCGGATTGATCATCTCATCTCATCTCATCGACCGAGCATTCTAGCGAGCGAGCGGCCAAGCCAGCAAGATCGACTCCTCACTCTCTCACCGATCTAGCAGCAGCAGTGGTAGTAGCTAGCAGCGTCANGNANGCAAG-GGGTTGCGAGAATGGCCTCGCCGTCAGCGCCGGGGCCGAAGCTGCAGAAGGCGATGGTGGCGGTGGACGAGAGCGAGTTCAGCCACCACGCGCTGGAGTGGGCGCTGCGCAACCTCGCGCCGACCATCGCGCCGCCGCTGCTCGTGCTCACCGTGCAGCCGCTCCTCCCCCTCGGCTACGTCTCCGCCGCCTCCTTCGGCTCCCCTCTGGGCACCCCCGTTGTAGCCCCGGAGCTGATT] [+] EMBL OSC811 [ATTTGTCAGCTGTTAGTTGTCACACCTACTCATCAGCCAACCAATTCGCCATCAATAGCAAACCAAGCGGATTGATCATCTCATCTCATCTCATCGACCGAGCATTCTAGCGAGCGAGCGGCCAAGCCAGCAAGATCGACTCCTCACTCTCTCACCGATCTAGCAGCAGCAGTGGTAGTAGCTAGCAGCGTCACGGA G AAG GGGTTGCGAGAATGGCCTCGCCGTCAGCGCCGGGGCCGAAGCTGCAGAAGGCGATGGTGGCGGTGGACGAGAGCGAGTTCAGCCACCACGCGCTGGAGTGGGCGCTGCGCAACCTCGCGCCGACCATCGCGCCGCCGCTGCTCGTGCTCACCGTGCAGCCGCTCCTCCCCCTC ] [+] EMBL OSC264 [ AGCGAGCGAGCGGCCAAGCCAGCAAGATCGACTCCTCACTCTCTCACCGATCTAGCAGCAGCAGTGGTAGTAGCTAGCAGCGTCANTNA GCAAG GGGTTGCGAGAATGGCCTCGCCGTCAGCGCCGGGGCCGAAGCTGCAGAAGGCGATGGTGGCGGTGGACGAGAGCGAGTTCAGCCACCACGCGCTGGAGTGGGCGCTGCGCAACCTCGCGCCGACCATCGCGCCGCCGCTGCTCGTGCTCACCGTGCAGCCGCTCCTCCCCCTCGGCTACGTCTCCGCCGCCTCCTTCGGCTCCCCTCTGGGCACCCCCGTTGTAGCCCCGGAGCTGAat] [+] EMBL AU063176 [ ACTCTCTCACCGATCTAGCAGCAGCAGTGGTAGTAGCTAGCAGCGTCA GNANGCAAG GGGTTGCGAGAATTGCCTCG CGTCAGCNCCGGGGCCGAAGCTGCAGANGGCGATGGTTGCGGTGGACGAGAGCGAGTTCAGCCACCACGCGCTGGAGTTGGCGCTGCG AACCTCGCGCCGACCATCGCGCCGNCGCTGCTCGTGCTCACCGTGCAGCCGCTCCTCCCCCTCGGCTACGTCTCCGCCGCCTCCTTCGGCTCCCCTCTNGGCACCCCCGTTGTAGCCCCGGAGCTGAT ] [+] EMBL C27900 [ ACTCTCTCACCGATCTAGCAGCAGCAGTGGTAGTAGCTAGCAGCGTCA GNANGCAAG GGGTTGCGAGAATTGCCTCG CGTCAGCTCCGGGGCCGAAGCTGCAGAAGGCGATGGTNGCGGTGGACGAGAGCGAGTTCAGCCACCACNCGCTGGAGTTGGCGCTGCG AACCTCGCGNCNACCATCGCGCCGCCGCTGCTCGTGCTCACCGTGCAGCCGCTCCTCCCCCTCGGCTACGTCTCCGCCGCCTCCTTCGGCTCCCCTCT GGCACCCCCGTTGTAGCCCCGGAGCTGAT ] [+] EMBL OSS3972A [ CTCTCTCACCGATCTAGCAGCAGCAGTGGTAGTAGCTAGCAGCGTCANTTANG AAGNGGGTTGCGAGAATGGCCTCGCCGTCAGCGCCGGGGCCGAAGCTGCAGAAGGCGATGGTGGCGGTGGACGAGAGCNAGTTCAGCCACCACGCGCTGGAGTGGGCGCTGCGCAACCTCGCGCCGACCATCGCGCCGCCGCTGCTCGTGCTCACCGTGCAGCCGCTCCTCCCCCTCGGCTACGTCTCCGCCGCCTCCTTCGGCTCCCCTCTGGGCACCCCCGTTGTAGCCCCGGAGCTGAT ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||