Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 8218 cluster # 8218       Sequences # 5       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8218#0 length = 1828 sequences # 2  
consensus_8218#1 length = 935 sequences # 2  
consensus_8218#2 length = 333 sequences # 1  

consensusID : consensus_8218#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1828
fasta sequence
                              [GAGAGAGGAAAAGAGAGC-GC-GATATGGGGGAGGAATCGCCGGCGGCCGGCGGTGGC-GC-GGCGGCGGCGGTGGCCGGAAAACCATCGGGCACGGCGCTTCCGAGGAGGGGGAAATCCTGCAAGGGCTGCCTCTACTACTCGTCCATGCTCAGATCCCGCGGATTCAACCCCGTCTGCGTGGGGATCCCGCGCTCCATCCCCCAAGTCCCAAGCTACGTGGTGGACGAGCCCAGAGAAGAGGCGGCGGCGCAGGGGCATGATTTGAGGCAGTTCAAGTACGCCTGCGCTGGTTACTCCATGTTTGTGGTGGATAACAAAGACGGCCGAAGCGGCGAGAAGGAGGGCAAGACGTTGTTGCCATATTGCCAGGGGCTTGAGCTATTGGTGGACAGCAGATTGGTTGAGAAGAAATCACCAAATAATGAGCCTGCTACTGCCTCTTATAGAAAGGAAGGTATGCTAAAGTATTTCTCTTGATGCCACAACTTCTTCATATTTGGTCTACAGTTGAACAAAACTCTATGATGACTTGGTACAGGTAATTGTGGAGTTTTGTTTTCAAATGATTTATGAATGATCAAACTTTTTAAAACTCTGTCAATATGTTACAACTTAATACTCCCTCCGTCCCAAAATATAAGTAACTTTGGCTATGTGTGTCCAGATTCATAGCCAAAGGTTGTTATATTTTGGGATGGACGTAGTAAGTACCAAAAGGTGGGTTGAAGCTCCATTTTCTCAGTATTAAGTCCATAGGTAGGTCATGTGCATTTGACGGTGGCAATTACACATTTCTGTAAACTTTAGCTTGGGTATTTCCATTTAACCATGTTTCAGTCATGTACAAACTTGTTCTTTTGTTCACAGACAGCTATAGAAATATTTGCTAATAGTATGGTATTAGCTGGGAAAAATGGAGTGTTAAGTCAAATTATCAGTCATGTTGAGAGTTTGGTTCAGTTTTGTTGGCCAATGTTCTTCTACAACAATAAGACCCATCTCTTTGGGTGTACCATTTCTTCATTGTTTAGATTGATGTTTAATACATTTGCGTTTCTTATTACAGCGGCCACCAGCTCTCGGCAACAAGGACAAAGACCCGGGCAACTTACAGGACAGGATTTCTATGCGAGGAAAGCTAGCTTTCAGATTTCCCCTTCCTGTCCCTTTCTTGTGATTGTCTTACTGATGTAGTACGAGGCTGCTGCAGGTTTAGGAAAAGCGCGGGATTGGTCGCTTCAGGCGTTGCAAAGAATCTAAACAAGACAGCTATTTACATCAAGGAAAACGTCGCAGACATACTTTACCCGGACCGTCGACCACCTAAATAGGAACTATGCTGCTTGCCCGTCGTTGTTCAGTTGGAGATCTGAAGAAAATTGCTACCGACATGAGATACAGAAGACTACCTGACGCCATATCCTTACAAATTACAATAACCACATCCCTATTGAGGAGTGGCCCGAGCCACATTGAGCAAAATTGGACGGTTTCTTGGATGCTCTTAATTCTTTCCATTGTACTTGCATCGTTTTTGTAATGTTATGGCCAGATACAAACTAATGTTGTACATGCGACAGCCTTCCTGCTTCATTGAAGCAAAAATGGGATCTGGTCGGTGAAATGTTGAATGATGTCAACTGTTAACTCCTTGAGGGCAAAAGGTTGATAGATATAAGTAGAAGAGTGCTATCCAATAGTGCGCTTATTATCGTACAGAGTAGCATATGGTTATCGTTTTCACCATGCAGGAAAAGCCATAATAGTATTAGGAGTATGTTAATCTGTTCTTTTGCTCTCTCGTACTAAATACTACTCCTTTACTACTC]

[+] EMBL AK100759             [GAGAGAGGAAAAGAGAGC GC GATATGGGGGAGGAATCGCCGGCGGCCGGCGGTGGC GC GGCGGCGGCGGTGGCCGGAAAACCATCGGGCACGGCGCTTCCGAGGAGGGGGAAATCCTGCAAGGGCTGCCTCTACTACTCGTCCATGCTCAGATCCCGCGGATTCAACCCCGTCTGCGTGGGGATCCCGCGCTCCATCCCCCAAGTCCCAAGCTACGTGGTGGACGAGCCCAGAGAAGAGGCGGCGGCGCAGGGGCATGATTTGAGGCAGTTCAAGTACGCCTGCGCTGGTTACTCCATGTTTGTGGTGGATAACAAAGACGGCCGAAGCGGCGAGAAGGAGGGCAAGACGTTGTTGCCATATTGCCAGGGGCTTGAGCTATTGGTGGACAGCAGATTGGTTGAGAAGAAATCACCAAATAATGAGCCTGCTACTGCCTCTTATAGAAAGGAAGGTATGCTAAAGTATTTCTCTTGATGCCACAACTTCTTCATATTTGGTCTACAGTTGAACAAAACTCTATGATGACTTGGTACAGGTAATTGTGGAGTTTTGTTTTCAAATGATTTATGAATGATCAAACTTTTTAAAACTCTGTCAATATGTTACAACTTAATACTCCCTCCGTCCCAAAATATAAGTAACTTTGGCTATGTGTGTCCAGATTCATAGCCAAAGGTTGTTATATTTTGGGATGGACGTAGTAAGTACCAAAAGGTGGGTTGAAGCTCCATTTTCTCAGTATTAAGTCCATAGGTAGGTCATGTGCATTTGACGGTGGCAATTACACATTTCTGTAAACTTTAGCTTGGGTATTTCCATTTAACCATGTTTCAGTCATGTACAAACTTGTTCTTTTGTTCACAGACAGCTATAGAAATATTTGCTAATAGTATGGTATTAGCTGGGAAAAATGGAGTGTTAAGTCAAATTATCAGTCATGTTGAGAGTTTGGTTCAGTTTTGTTGGCCAATGTTCTTCTACAACAATAAGACCCATCTCTTTGGGTGTACCATTTCTTCATTGTTTAGATTGATGTTTAATACATTTGCGTTTCTTATTACAGCGGCCACCAGCTCTCGGCAACAAGGACAAAGACCCGGGCAACTTACAGGACAGGATTTCTATGCGAGGAAAGCTAGCTTTCAGATTTCCCCTTCCTGTCCCTTTCTTGTGATTGTCTTACTGATGTAGTACGAGGCTGCTGCAGGTTTAGGAAAAGCGCGGGATTGGTCGCTTCAGGCGTTGCAAAGAATCTAAACAAGACAGCTATTTACATCAAGGAAAACGTCGCAGACATACTTTACCCGGACCGTCGACCACCTAAATAGGAACTATGCTGCTTGCCCGTCGTTGTTCAGTTGGAGATCTGAAGAAAATTGCTACCGACATGAGATACAGAAGACTACCTGACGCCATATCCTTACAAATTACAATAACCACATCCCTATTGAGGAGTGGCCCGAGCCACATTGAGCAAAATTGGACGGTTTCTTGGATGCTCTTAATTCTTTCCATTGTACTTGCATCGTTTTTGTAATGTTATGGCCAGATACAAACTAATGTTGTACATGCGACAGCCTTCCTGCTTCATTGAAGCAAAAATGGGATCTGGTCGGTGAAATGTTGAATGATGTCAACTGTTAACTCCTTGAGGGCAAAAGGTTGATAGATATAAGTAGAAGAGTGCTATCCAATAGTGCGCTTATTATCGTACAGAGTAGCATATGGTTATCGTTTTCACCATGCAGGAAAAGCCATAATAGTATTAGGAGTATGTTAATCTGTTCTTTTGCTCTCTCGTACTAAATACTACTCCTTTACTACTC]
[+] EMBL AU089736             [   AGAGGAAAAGAGAGCAGCAGATATGGGGGAGGAATCGCCGGCGGCCGGCGGTGGCAGCAGGCGGCGGCGGCGGCCGGAAAACCATCGGGCACGGCGCTTCCGAGGAGGGGGAAATCCTGCAAGGGCTGCCTCTACTACTCGTCCATGCTCAGATCCCGCGGATTCAACCCCGTCTGCGTGGGGATCCCGCGCTCCATCCCCCAAGTCCCAAGCTACGTGGTGGACGAGCCCAGAGAAGAGGCGGCGGCGCAGGGGCATGATTTGAGGCAGTTCANGTACGCCTGCGCTGGTTACTCCATGTTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]


>consensus_8218#0 GAGAGAGGAAAAGAGAGCGCGATATGGGGGAGGAATCGCCGGCGGCCGGCGGTGGCGCGG CGGCGGCGGTGGCCGGAAAACCATCGGGCACGGCGCTTCCGAGGAGGGGGAAATCCTGCA AGGGCTGCCTCTACTACTCGTCCATGCTCAGATCCCGCGGATTCAACCCCGTCTGCGTGG GGATCCCGCGCTCCATCCCCCAAGTCCCAAGCTACGTGGTGGACGAGCCCAGAGAAGAGG CGGCGGCGCAGGGGCATGATTTGAGGCAGTTCAAGTACGCCTGCGCTGGTTACTCCATGT TTGTGGTGGATAACAAAGACGGCCGAAGCGGCGAGAAGGAGGGCAAGACGTTGTTGCCAT ATTGCCAGGGGCTTGAGCTATTGGTGGACAGCAGATTGGTTGAGAAGAAATCACCAAATA ATGAGCCTGCTACTGCCTCTTATAGAAAGGAAGGTATGCTAAAGTATTTCTCTTGATGCC ACAACTTCTTCATATTTGGTCTACAGTTGAACAAAACTCTATGATGACTTGGTACAGGTA ATTGTGGAGTTTTGTTTTCAAATGATTTATGAATGATCAAACTTTTTAAAACTCTGTCAA TATGTTACAACTTAATACTCCCTCCGTCCCAAAATATAAGTAACTTTGGCTATGTGTGTC CAGATTCATAGCCAAAGGTTGTTATATTTTGGGATGGACGTAGTAAGTACCAAAAGGTGG GTTGAAGCTCCATTTTCTCAGTATTAAGTCCATAGGTAGGTCATGTGCATTTGACGGTGG CAATTACACATTTCTGTAAACTTTAGCTTGGGTATTTCCATTTAACCATGTTTCAGTCAT GTACAAACTTGTTCTTTTGTTCACAGACAGCTATAGAAATATTTGCTAATAGTATGGTAT TAGCTGGGAAAAATGGAGTGTTAAGTCAAATTATCAGTCATGTTGAGAGTTTGGTTCAGT TTTGTTGGCCAATGTTCTTCTACAACAATAAGACCCATCTCTTTGGGTGTACCATTTCTT CATTGTTTAGATTGATGTTTAATACATTTGCGTTTCTTATTACAGCGGCCACCAGCTCTC GGCAACAAGGACAAAGACCCGGGCAACTTACAGGACAGGATTTCTATGCGAGGAAAGCTA GCTTTCAGATTTCCCCTTCCTGTCCCTTTCTTGTGATTGTCTTACTGATGTAGTACGAGG CTGCTGCAGGTTTAGGAAAAGCGCGGGATTGGTCGCTTCAGGCGTTGCAAAGAATCTAAA CAAGACAGCTATTTACATCAAGGAAAACGTCGCAGACATACTTTACCCGGACCGTCGACC ACCTAAATAGGAACTATGCTGCTTGCCCGTCGTTGTTCAGTTGGAGATCTGAAGAAAATT GCTACCGACATGAGATACAGAAGACTACCTGACGCCATATCCTTACAAATTACAATAACC ACATCCCTATTGAGGAGTGGCCCGAGCCACATTGAGCAAAATTGGACGGTTTCTTGGATG CTCTTAATTCTTTCCATTGTACTTGCATCGTTTTTGTAATGTTATGGCCAGATACAAACT AATGTTGTACATGCGACAGCCTTCCTGCTTCATTGAAGCAAAAATGGGATCTGGTCGGTG AAATGTTGAATGATGTCAACTGTTAACTCCTTGAGGGCAAAAGGTTGATAGATATAAGTA GAAGAGTGCTATCCAATAGTGCGCTTATTATCGTACAGAGTAGCATATGGTTATCGTTTT CACCATGCAGGAAAAGCCATAATAGTATTAGGAGTATGTTAATCTGTTCTTTTGCTCTCT CGTACTAAATACTACTCCTTTACTACTC



consensusID : consensus_8218#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 935
fasta sequence
                              [AAGAGAGCGCGATATGGGGGAGGAATCGCCGGCGGCCGGCGGTGGCGCGGCGGCGGCGGCGGCCGGAAAACCATCGGGCACGGCGCTTCCGAGGAGGGGGAAATCCTGCAAGGGCTGCCTCTACTACTCGTCCATGCTCAGATCCCGCGGATTCAACCCCGTCTGCGTGGGGATCCCGCGCTCCATCCCCCAAGTCCCAAGCTACGTGGTGGACGAGCCCAGAGAAGAGGCGGCGGCGCAGGGGCATGATTTGAGGCAGTTCAAGTACGCCTGCGCTGGTTACTCCATGTTTGTGGTGGATAACAAAGACGGCCGAAGCGGCGAGAAGGAGGGCAAGACGTTGTTGCCATATTGCCAGGGGCTTGAGCTATTGGTGGACAGCAGATTGGTTGAGAAGAAATCACCAAATAATGAGCCTGCTACTGCCTCTTATAGAAAGGAAGCGGCCACCAGCTCTCGGCAACA-AGGACAAAGACCCGGGCAACTTACA-GGACA-GGATTTCTATGCGAGGTTTAGGAAAAGCGCGGGATTGGTCGCTTCAGGCGTTGCAAAGAATCTAAACAAGACAGCTATTTACATCAAGGAAAACGTCGCAGACATACTTTACCCGGACCGTCGACCACCTAAATAGGAACTATGCTGCTTGCCCGTCGTTGTTCAGTTGGAGATCTGAAGAAAATTGCTACCGACATGAGATACAGAAGACTACCTGACGCCATATCCTTACAAATTA-CAATAACCACATCCCTATTGAGGAGTGGCCCGAGCCACATTGAGCAAAATTGGACGGTTTCTTGGATGCTCTTAATTCTTTCCATTGTACTTGCATCGTTTTTGTAATGTTATGGCCAGATACAAACTAATGTTGTACATGCGACAGCCTTCCTGCTTCATTGAAGCAAAAATGGGATCTGGTCGGTGAAATGTTGAAAAAA]

[+] EMBL AK058211             [AAGAGAGCGCGATATGGGGGAGGAATCGCCGGCGGCCGGCGGTGGCGCGGCGGCGGCGGCGGCCGGAAAACCATCGGGCACGGCGCTTCCGAGGAGGGGGAAATCCTGCAAGGGCTGCCTCTACTACTCGTCCATGCTCAGATCCCGCGGATTCAACCCCGTCTGCGTGGGGATCCCGCGCTCCATCCCCCAAGTCCCAAGCTACGTGGTGGACGAGCCCAGAGAAGAGGCGGCGGCGCAGGGGCATGATTTGAGGCAGTTCAAGTACGCCTGCGCTGGTTACTCCATGTTTGTGGTGGATAACAAAGACGGCCGAAGCGGCGAGAAGGAGGGCAAGACGTTGTTGCCATATTGCCAGGGGCTTGAGCTATTGGTGGACAGCAGATTGGTTGAGAAGAAATCACCAAATAATGAGCCTGCTACTGCCTCTTATAGAAAGGAAGCGGCCACCAGCTCTCGGCAACA AGGACAAAGACCCGGGCAACTTACA GGACA GGATTTCTATGCGAGGTTTAGGAAAAGCGCGGGATTGGTCGCTTCAGGCGTTGCAAAGAATCTAAACAAGACAGCTATTTACATCAAGGAAAACGTCGCAGACATACTTTACCCGGACCGTCGACCACCTAAATAGGAACTATGCTGCTTGCCCGTCGTTGTTCAGTTGGAGATCTGAAGAAAATTGCTACCGACATGAGATACAGAAGACTACCTGACGCCATATCCTTACAAATTA CAATAACCACATCCCTATTGAGGAGTGGCCCGAGCCACATTGAGCAAAATTGGACGGTTTCTTGGATGCTCTTAATTCTTTCCATTGTACTTGCATCGTTTTTGTAATGTTATGGCCAGATACAAACTAATGTTGTACATGCGACAGCCTTCCTGCTTCATTGAAGCAAAAATGGGAT                        ]
[+] EMBL BI811214             [                                                                                                                                                                                                                                                                                                                                                                                                                  ACCCAATAATGAGCCTGCTACTGCCTCTTATAGAAAGGAA CGGCCACCAGCTCTCGGCAACACAGGACCAAGACCCGGGC ACTTACACGGACACGGATTTCTATGCGAGGTTTAGGAAGAGCGCGGGATTGGTCGCTTCAGGCGTTGCCAAGAATCTAAACCAGACAGCTATTTACATCAAGGAAAACGTCGCAGACATACTTTACCCGGACCGTCGACCACCTAAATAGGAACTATGCTGCTTGCCCGTCGTTGTTCAGTTGGAGATCTGAAGAAAATTGCTACCGACATGAGATACAGAAGACTACCTGACGCCATATCCTTACAAATTACCAATAACCACATCCCTATTGAGGAGTGGCCCGAGCCACATTGAGCCAAATTGGACGGTTTCTTGGATGCTCTTAATTCTTTCC TTGTACTTGCATCGTTTTTGTAATGTTATGGCCAGATAC AACTAATGTTGTACATGCGACAGCCTTCCTGCTTCATTGAAGCCAAAATCGGATCTGGTCGGTGAAATGTTGAAAAAA]


>consensus_8218#1 AAGAGAGCGCGATATGGGGGAGGAATCGCCGGCGGCCGGCGGTGGCGCGGCGGCGGCGGC GGCCGGAAAACCATCGGGCACGGCGCTTCCGAGGAGGGGGAAATCCTGCAAGGGCTGCCT CTACTACTCGTCCATGCTCAGATCCCGCGGATTCAACCCCGTCTGCGTGGGGATCCCGCG CTCCATCCCCCAAGTCCCAAGCTACGTGGTGGACGAGCCCAGAGAAGAGGCGGCGGCGCA GGGGCATGATTTGAGGCAGTTCAAGTACGCCTGCGCTGGTTACTCCATGTTTGTGGTGGA TAACAAAGACGGCCGAAGCGGCGAGAAGGAGGGCAAGACGTTGTTGCCATATTGCCAGGG GCTTGAGCTATTGGTGGACAGCAGATTGGTTGAGAAGAAATCACCAAATAATGAGCCTGC TACTGCCTCTTATAGAAAGGAAGCGGCCACCAGCTCTCGGCAACAAGGACAAAGACCCGG GCAACTTACAGGACAGGATTTCTATGCGAGGTTTAGGAAAAGCGCGGGATTGGTCGCTTC AGGCGTTGCAAAGAATCTAAACAAGACAGCTATTTACATCAAGGAAAACGTCGCAGACAT ACTTTACCCGGACCGTCGACCACCTAAATAGGAACTATGCTGCTTGCCCGTCGTTGTTCA GTTGGAGATCTGAAGAAAATTGCTACCGACATGAGATACAGAAGACTACCTGACGCCATA TCCTTACAAATTACAATAACCACATCCCTATTGAGGAGTGGCCCGAGCCACATTGAGCAA AATTGGACGGTTTCTTGGATGCTCTTAATTCTTTCCATTGTACTTGCATCGTTTTTGTAA TGTTATGGCCAGATACAAACTAATGTTGTACATGCGACAGCCTTCCTGCTTCATTGAAGC AAAAATGGGATCTGGTCGGTGAAATGTTGAAAAAA



consensusID : consensus_8218#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 333
fasta sequence
                              [TACTTTACCCGGACCGTCGACCACCTAAATAGGAACTATGCTGCTTGCCCGTCGTTGTTCAGTTGGAGATCTGAAGAAAATTGCTACCGACATGAGATACAGAAGACTACCTGACGCCATATCCTTACAAATTACAATAACCACATCCCTATTGAGGAGTGGCCCGAGCCACATTGAGCAAAATTGGACGGTTTCTTGGATGCTCTTAATTCTTTCCATTGTACTTGCATCGTTTTTGTAATGTTATGGCCAGATACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AU057083             [TACTTTACCCGGACCGTCGACCACCTAAATAGGAACTATGCTGCTTGCCCGTCGTTGTTCAGTTGGAGATCTGAAGAAAATTGCTACCGACATGAGATACAGAAGACTACCTGACGCCATATCCTTACAAATTACAATAACCACATCCCTATTGAGGAGTGGCCCGAGCCACATTGAGCAAAATTGGACGGTTTCTTGGATGCTCTTAATTCTTTCCATTGTACTTGCATCGTTTTTGTAATGTTATGGCCAGATACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]


>consensus_8218#2 TACTTTACCCGGACCGTCGACCACCTAAATAGGAACTATGCTGCTTGCCCGTCGTTGTTC AGTTGGAGATCTGAAGAAAATTGCTACCGACATGAGATACAGAAGACTACCTGACGCCAT ATCCTTACAAATTACAATAACCACATCCCTATTGAGGAGTGGCCCGAGCCACATTGAGCA AAATTGGACGGTTTCTTGGATGCTCTTAATTCTTTCCATTGTACTTGCATCGTTTTTGTA ATGTTATGGCCAGATACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8218#0      GAGAGAGGAAAAGAGAGCGCGATATGGGGGAGGAATCGCCGGCGGCCGGCGGTGGCGCGG 60
consensus_8218#1      ----------AAGAGAGCGCGATATGGGGGAGGAATCGCCGGCGGCCGGCGGTGGCGCGG 50
consensus_8218#2      ------------------------------------------------------------
                                                                                  

consensus_8218#0      CGGCGGCGGTGGCCGGAAAACCATCGGGCACGGCGCTTCCGAGGAGGGGGAAATCCTGCA 120
consensus_8218#1      CGGCGGCGGCGGCCGGAAAACCATCGGGCACGGCGCTTCCGAGGAGGGGGAAATCCTGCA 110
consensus_8218#2      ------------------------------------------------------------
                                                                                  

consensus_8218#0      AGGGCTGCCTCTACTACTCGTCCATGCTCAGATCCCGCGGATTCAACCCCGTCTGCGTGG 180
consensus_8218#1      AGGGCTGCCTCTACTACTCGTCCATGCTCAGATCCCGCGGATTCAACCCCGTCTGCGTGG 170
consensus_8218#2      ------------------------------------------------------------
                                                                                  

consensus_8218#0      GGATCCCGCGCTCCATCCCCCAAGTCCCAAGCTACGTGGTGGACGAGCCCAGAGAAGAGG 240
consensus_8218#1      GGATCCCGCGCTCCATCCCCCAAGTCCCAAGCTACGTGGTGGACGAGCCCAGAGAAGAGG 230
consensus_8218#2      ------------------------------------------------------------
                                                                                  

consensus_8218#0      CGGCGGCGCAGGGGCATGATTTGAGGCAGTTCAAGTACGCCTGCGCTGGTTACTCCATGT 300
consensus_8218#1      CGGCGGCGCAGGGGCATGATTTGAGGCAGTTCAAGTACGCCTGCGCTGGTTACTCCATGT 290
consensus_8218#2      ------------------------------------------------------------
                                                                                  

consensus_8218#0      TTGTGGTGGATAACAAAGACGGCCGAAGCGGCGAGAAGGAGGGCAAGACGTTGTTGCCAT 360
consensus_8218#1      TTGTGGTGGATAACAAAGACGGCCGAAGCGGCGAGAAGGAGGGCAAGACGTTGTTGCCAT 350
consensus_8218#2      ------------------------------------------------------------
                                                                                  

consensus_8218#0      ATTGCCAGGGGCTTGAGCTATTGGTGGACAGCAGATTGGTTGAGAAGAAATCACCAAATA 420
consensus_8218#1      ATTGCCAGGGGCTTGAGCTATTGGTGGACAGCAGATTGGTTGAGAAGAAATCACCAAATA 410
consensus_8218#2      ------------------------------------------------------------
                                                                                  

consensus_8218#0      ATGAGCCTGCTACTGCCTCTTATAGAAAGGAAGGTATGCTAAAGTATTTCTCTTGATGCC 480
consensus_8218#1      ATGAGCCTGCTACTGCCTCTTATAGAAAGGAAG--------------------------- 443
consensus_8218#2      ------------------------------------------------------------
                                                                                  

consensus_8218#0      ACAACTTCTTCATATTTGGTCTACAGTTGAACAAAACTCTATGATGACTTGGTACAGGTA 540
consensus_8218#1      ------------------------------------------------------------
consensus_8218#2      ------------------------------------------------------------
                                                                                  

consensus_8218#0      ATTGTGGAGTTTTGTTTTCAAATGATTTATGAATGATCAAACTTTTTAAAACTCTGTCAA 600
consensus_8218#1      ------------------------------------------------------------
consensus_8218#2      ------------------------------------------------------------
                                                                                  

consensus_8218#0      TATGTTACAACTTAATACTCCCTCCGTCCCAAAATATAAGTAACTTTGGCTATGTGTGTC 660
consensus_8218#1      ------------------------------------------------------------
consensus_8218#2      ------------------------------------------------------------
                                                                                  

consensus_8218#0      CAGATTCATAGCCAAAGGTTGTTATATTTTGGGATGGACGTAGTAAGTACCAAAAGGTGG 720
consensus_8218#1      ------------------------------------------------------------
consensus_8218#2      ------------------------------------------------------------
                                                                                  

consensus_8218#0      GTTGAAGCTCCATTTTCTCAGTATTAAGTCCATAGGTAGGTCATGTGCATTTGACGGTGG 780
consensus_8218#1      ------------------------------------------------------------
consensus_8218#2      ------------------------------------------------------------
                                                                                  

consensus_8218#0      CAATTACACATTTCTGTAAACTTTAGCTTGGGTATTTCCATTTAACCATGTTTCAGTCAT 840
consensus_8218#1      ------------------------------------------------------------
consensus_8218#2      ------------------------------------------------------------
                                                                                  

consensus_8218#0      GTACAAACTTGTTCTTTTGTTCACAGACAGCTATAGAAATATTTGCTAATAGTATGGTAT 900
consensus_8218#1      ------------------------------------------------------------
consensus_8218#2      ------------------------------------------------------------
                                                                                  

consensus_8218#0      TAGCTGGGAAAAATGGAGTGTTAAGTCAAATTATCAGTCATGTTGAGAGTTTGGTTCAGT 960
consensus_8218#1      ------------------------------------------------------------
consensus_8218#2      ------------------------------------------------------------
                                                                                  

consensus_8218#0      TTTGTTGGCCAATGTTCTTCTACAACAATAAGACCCATCTCTTTGGGTGTACCATTTCTT 1020
consensus_8218#1      ------------------------------------------------------------
consensus_8218#2      ------------------------------------------------------------
                                                                                  

consensus_8218#0      CATTGTTTAGATTGATGTTTAATACATTTGCGTTTCTTATTACAGCGGCCACCAGCTCTC 1080
consensus_8218#1      ---------------------------------------------CGGCCACCAGCTCTC 458
consensus_8218#2      ------------------------------------------------------------
                                                                                  

consensus_8218#0      GGCAACAAGGACAAAGACCCGGGCAACTTACAGGACAGGATTTCTATGCGAGGAAAGCTA 1140
consensus_8218#1      GGCAACAAGGACAAAGACCCGGGCAACTTACAGGACAGGATTTCTATGCGAGG------- 511
consensus_8218#2      ------------------------------------------------------------
                                                                                  

consensus_8218#0      GCTTTCAGATTTCCCCTTCCTGTCCCTTTCTTGTGATTGTCTTACTGATGTAGTACGAGG 1200
consensus_8218#1      ------------------------------------------------------------
consensus_8218#2      ------------------------------------------------------------
                                                                                  

consensus_8218#0      CTGCTGCAGGTTTAGGAAAAGCGCGGGATTGGTCGCTTCAGGCGTTGCAAAGAATCTAAA 1260
consensus_8218#1      ----------TTTAGGAAAAGCGCGGGATTGGTCGCTTCAGGCGTTGCAAAGAATCTAAA 561
consensus_8218#2      ------------------------------------------------------------
                                                                                  

consensus_8218#0      CAAGACAGCTATTTACATCAAGGAAAACGTCGCAGACATACTTTACCCGGACCGTCGACC 1320
consensus_8218#1      CAAGACAGCTATTTACATCAAGGAAAACGTCGCAGACATACTTTACCCGGACCGTCGACC 621
consensus_8218#2      --------------------------------------TACTTTACCCGGACCGTCGACC 22
                                                            **********************

consensus_8218#0      ACCTAAATAGGAACTATGCTGCTTGCCCGTCGTTGTTCAGTTGGAGATCTGAAGAAAATT 1380
consensus_8218#1      ACCTAAATAGGAACTATGCTGCTTGCCCGTCGTTGTTCAGTTGGAGATCTGAAGAAAATT 681
consensus_8218#2      ACCTAAATAGGAACTATGCTGCTTGCCCGTCGTTGTTCAGTTGGAGATCTGAAGAAAATT 82
                      ************************************************************

consensus_8218#0      GCTACCGACATGAGATACAGAAGACTACCTGACGCCATATCCTTACAAATTACAATAACC 1440
consensus_8218#1      GCTACCGACATGAGATACAGAAGACTACCTGACGCCATATCCTTACAAATTACAATAACC 741
consensus_8218#2      GCTACCGACATGAGATACAGAAGACTACCTGACGCCATATCCTTACAAATTACAATAACC 142
                      ************************************************************

consensus_8218#0      ACATCCCTATTGAGGAGTGGCCCGAGCCACATTGAGCAAAATTGGACGGTTTCTTGGATG 1500
consensus_8218#1      ACATCCCTATTGAGGAGTGGCCCGAGCCACATTGAGCAAAATTGGACGGTTTCTTGGATG 801
consensus_8218#2      ACATCCCTATTGAGGAGTGGCCCGAGCCACATTGAGCAAAATTGGACGGTTTCTTGGATG 202
                      ************************************************************

consensus_8218#0      CTCTTAATTCTTTCCATTGTACTTGCATCGTTTTTGTAATGTTATGGCCAGATACAAACT 1560
consensus_8218#1      CTCTTAATTCTTTCCATTGTACTTGCATCGTTTTTGTAATGTTATGGCCAGATACAAACT 861
consensus_8218#2      CTCTTAATTCTTTCCATTGTACTTGCATCGTTTTTGTAATGTTATGGCCAGATACAAAAA 262
                      **********************************************************  

consensus_8218#0      AATGTTGTACATGCGACAGCCTTCCTGCTTCATTGAAGCAAAAATGGGATCTGGTCGGTG 1620
consensus_8218#1      AATGTTGTACATGCGACAGCCTTCCTGCTTCATTGAAGCAAAAATGGGATCTGGTCGGTG 921
consensus_8218#2      AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 322
                      **      * *    * *             *   **  *****    *           

consensus_8218#0      AAATGTTGAATGATGTCAACTGTTAACTCCTTGAGGGCAAAAGGTTGATAGATATAAGTA 1680
consensus_8218#1      AAATGTTGAAAAAA---------------------------------------------- 935
consensus_8218#2      AAAAAAAAAAA------------------------------------------------- 333
                      ***     **                                                  

consensus_8218#0      GAAGAGTGCTATCCAATAGTGCGCTTATTATCGTACAGAGTAGCATATGGTTATCGTTTT 1740
consensus_8218#1      ------------------------------------------------------------
consensus_8218#2      ------------------------------------------------------------
                                                                                  

consensus_8218#0      CACCATGCAGGAAAAGCCATAATAGTATTAGGAGTATGTTAATCTGTTCTTTTGCTCTCT 1800
consensus_8218#1      ------------------------------------------------------------
consensus_8218#2      ------------------------------------------------------------
                                                                                  

consensus_8218#0      CGTACTAAATACTACTCCTTTACTACTC 1828
consensus_8218#1      ----------------------------
consensus_8218#2      ----------------------------
                                                  




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)